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Search of human proteins with 171906611
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo
sapiens]
(342 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo sa... 695 0.0
gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo sa... 390 e-109
gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens] 124 9e-29
gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ... 124 9e-29
gi|18426911 signal-regulatory protein alpha precursor [Homo sapi... 99 7e-21
gi|91105767 signal-regulatory protein alpha precursor [Homo sapi... 99 7e-21
gi|91105764 signal-regulatory protein alpha precursor [Homo sapi... 99 7e-21
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso... 97 2e-20
gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso... 94 1e-19
gi|94538339 signal-regulatory protein gamma isoform 3 precursor ... 92 5e-19
gi|94538335 signal-regulatory protein gamma isoform 1 precursor ... 92 5e-19
gi|144953878 signal-regulatory protein beta 1 isoform 2 precurso... 91 2e-18
gi|94538337 signal-regulatory protein gamma isoform 2 precursor ... 91 2e-18
gi|239751927 PREDICTED: similar to signal-regulatory protein bet... 90 3e-18
gi|169217521 PREDICTED: similar to signal-regulatory protein bet... 89 7e-18
gi|30425382 signal-regulatory protein delta [Homo sapiens] 79 8e-15
gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo ... 54 2e-07
gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens] 46 6e-05
gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo sa... 45 1e-04
gi|110431348 deleted in colorectal carcinoma [Homo sapiens] 44 3e-04
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 42 6e-04
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 42 6e-04
gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42... 42 8e-04
gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo ... 41 0.002
gi|27894376 cell adhesion molecule with homology to L1CAM precur... 40 0.002
gi|24111244 MAM domain containing glycosylphosphatidylinositol a... 40 0.002
gi|145275198 ADAMTS-like 3 precursor [Homo sapiens] 40 0.003
gi|157311649 neogenin homolog 1 [Homo sapiens] 40 0.004
gi|15147240 brother of CDO [Homo sapiens] 40 0.004
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 39 0.005
>gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo
sapiens]
Length = 342
Score = 695 bits (1794), Expect = 0.0
Identities = 342/342 (100%), Positives = 342/342 (100%)
Query: 1 MCSTMSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRC 60
MCSTMSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRC
Sbjct: 1 MCSTMSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRC 60
Query: 61 MVVGSCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTRE 120
MVVGSCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTRE
Sbjct: 61 MVVGSCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTRE 120
Query: 121 HTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNC 180
HTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNC
Sbjct: 121 HTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNC 180
Query: 181 TVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILLQNVSSEDAGTY 240
TVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILLQNVSSEDAGTY
Sbjct: 181 TVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILLQNVSSEDAGTY 240
Query: 241 YCVKFQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSEPATEMSPTGLLVVFAPVVLGLK 300
YCVKFQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSEPATEMSPTGLLVVFAPVVLGLK
Sbjct: 241 YCVKFQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSEPATEMSPTGLLVVFAPVVLGLK 300
Query: 301 AITLAALLLALATSRRSPGQEDVKTTGPAGAMNTLAWSKGQE 342
AITLAALLLALATSRRSPGQEDVKTTGPAGAMNTLAWSKGQE
Sbjct: 301 AITLAALLLALATSRRSPGQEDVKTTGPAGAMNTLAWSKGQE 342
>gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo
sapiens]
Length = 244
Score = 390 bits (1003), Expect = e-109
Identities = 194/200 (97%), Positives = 197/200 (98%)
Query: 143 EGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSRE 202
EG ++ +GAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSRE
Sbjct: 45 EGPMLVAEGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSRE 104
Query: 203 AIYNFGGISHPKETAVQASNNDFSILLQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLK 262
AIYNFGGISHPKETAVQASNNDFSILLQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLK
Sbjct: 105 AIYNFGGISHPKETAVQASNNDFSILLQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLK 164
Query: 263 VKAKSTSSKEAEFTSEPATEMSPTGLLVVFAPVVLGLKAITLAALLLALATSRRSPGQED 322
VKAKSTSSKEAEFTSEPATEMSPTGLLVVFAPVVLGLKAITLAALLLALATSRRSPGQED
Sbjct: 165 VKAKSTSSKEAEFTSEPATEMSPTGLLVVFAPVVLGLKAITLAALLLALATSRRSPGQED 224
Query: 323 VKTTGPAGAMNTLAWSKGQE 342
VKTTGPAGAMNTLAWSKGQE
Sbjct: 225 VKTTGPAGAMNTLAWSKGQE 244
Score = 154 bits (390), Expect = 8e-38
Identities = 92/206 (44%), Positives = 113/206 (54%), Gaps = 28/206 (13%)
Query: 1 MCSTMSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAE-------- 52
MCSTMSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAE
Sbjct: 1 MCSTMSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPD 60
Query: 53 --------------GETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPM 98
G+T+ L C V+G G I+W + + ++ IYNF S P
Sbjct: 61 LWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPK---- 116
Query: 99 IQRTSEPLNCDYSIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPD 158
+ + N D+SI + NV+ E GTY+CV+F + + S +GTS+ VK +
Sbjct: 117 -ETAVQASNNDFSILLQNVSSEDAGTYYCVKFQ-RKPNRQYLSGQGTSLKVKAKSTSSKE 174
Query: 159 LWIIQPQELVLGTTGDTVFLNCTVLG 184
+ TG V VLG
Sbjct: 175 AEFTSEPATEMSPTGLLVVFAPVVLG 200
>gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]
Length = 651
Score = 124 bits (312), Expect = 9e-29
Identities = 82/251 (32%), Positives = 125/251 (49%), Gaps = 35/251 (13%)
Query: 27 PSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYN 86
P ++G + + QV+QPE KW K + Q+ IY+
Sbjct: 412 PIGSTGAAGEEELQVIQPE--------------------------KWFKGTETGQELIYS 445
Query: 87 FKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTS 146
K G FP + I ++ N D+S+ I ++TR +TGTY+CV+F E+KS GT
Sbjct: 446 SKGGHFPKIA-CISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPDMELKSGPGTE 504
Query: 147 VLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYN 206
+ V E L +IQP+ V G+ LNCTV P GPI+WF+GA ++ IY+
Sbjct: 505 LSVHRVAGEE--LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYS 562
Query: 207 FGGISHPKETAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTS 260
P+ T + + ++ D+SI + +++ EDAGTYYC+K +R N + SG GT
Sbjct: 563 PKRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQ 622
Query: 261 LKVKAKSTSSK 271
+ V+ SK
Sbjct: 623 MSVRGLLLGSK 633
>gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
sapiens]
Length = 651
Score = 124 bits (312), Expect = 9e-29
Identities = 82/251 (32%), Positives = 125/251 (49%), Gaps = 35/251 (13%)
Query: 27 PSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYN 86
P ++G + + QV+QPE KW K + Q+ IY+
Sbjct: 412 PIGSTGAAGEEELQVIQPE--------------------------KWFKGTETGQELIYS 445
Query: 87 FKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTS 146
K G FP + I ++ N D+S+ I ++TR +TGTY+CV+F E+KS GT
Sbjct: 446 SKGGHFPKIA-CISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPDMELKSGPGTE 504
Query: 147 VLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYN 206
+ V E L +IQP+ V G+ LNCTV P GPI+WF+GA ++ IY+
Sbjct: 505 LSVHRVAGEE--LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYS 562
Query: 207 FGGISHPKETAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTS 260
P+ T + + ++ D+SI + +++ EDAGTYYC+K +R N + SG GT
Sbjct: 563 PKRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQ 622
Query: 261 LKVKAKSTSSK 271
+ V+ SK
Sbjct: 623 MSVRGLLLGSK 633
>gi|18426911 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 98.6 bits (244), Expect = 7e-21
Identities = 58/136 (42%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
E +L +IQP + VL G+T L CT P GPI+WF+GAG RE IYN P+
Sbjct: 31 EEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRV 90
Query: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 269
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+AK +
Sbjct: 91 TTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS- 149
Query: 270 SKEAEFTSEPATEMSP 285
A S PA +P
Sbjct: 150 ---APVVSGPAARATP 162
Score = 85.1 bits (209), Expect = 8e-17
Identities = 62/179 (34%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 20 LLALVLVPSDA-SGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVGSCTDGMIKWVKVST 78
LL L+L S A SG + + QV+QP+ +LVA GET LRC G I+W + +
Sbjct: 14 LLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAG 73
Query: 79 QDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCVRF-DGLSEHS 137
++ IYN K G FP V + T N D+SI I N+T GTY+CV+F G +
Sbjct: 74 PGRELIYNQKEGHFPRVTTVSDLTKRN-NMDFSIRIGNITPADAGTYYCVKFRKGSPDDV 132
Query: 138 EMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPG-PIRWFQ 195
E KS GT + V+ +P ++ T TV C G P ++WF+
Sbjct: 133 EFKSGAGTELSVRA----KPSAPVVS-GPAARATPQHTVSFTCESHGFSPRDITLKWFK 186
>gi|91105767 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 98.6 bits (244), Expect = 7e-21
Identities = 58/136 (42%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
E +L +IQP + VL G+T L CT P GPI+WF+GAG RE IYN P+
Sbjct: 31 EEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRV 90
Query: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 269
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+AK +
Sbjct: 91 TTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS- 149
Query: 270 SKEAEFTSEPATEMSP 285
A S PA +P
Sbjct: 150 ---APVVSGPAARATP 162
Score = 85.1 bits (209), Expect = 8e-17
Identities = 62/179 (34%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 20 LLALVLVPSDA-SGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVGSCTDGMIKWVKVST 78
LL L+L S A SG + + QV+QP+ +LVA GET LRC G I+W + +
Sbjct: 14 LLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAG 73
Query: 79 QDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCVRF-DGLSEHS 137
++ IYN K G FP V + T N D+SI I N+T GTY+CV+F G +
Sbjct: 74 PGRELIYNQKEGHFPRVTTVSDLTKRN-NMDFSIRIGNITPADAGTYYCVKFRKGSPDDV 132
Query: 138 EMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPG-PIRWFQ 195
E KS GT + V+ +P ++ T TV C G P ++WF+
Sbjct: 133 EFKSGAGTELSVRA----KPSAPVVS-GPAARATPQHTVSFTCESHGFSPRDITLKWFK 186
>gi|91105764 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 98.6 bits (244), Expect = 7e-21
Identities = 58/136 (42%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
E +L +IQP + VL G+T L CT P GPI+WF+GAG RE IYN P+
Sbjct: 31 EEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRV 90
Query: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 269
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+AK +
Sbjct: 91 TTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS- 149
Query: 270 SKEAEFTSEPATEMSP 285
A S PA +P
Sbjct: 150 ---APVVSGPAARATP 162
Score = 85.1 bits (209), Expect = 8e-17
Identities = 62/179 (34%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 20 LLALVLVPSDA-SGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVGSCTDGMIKWVKVST 78
LL L+L S A SG + + QV+QP+ +LVA GET LRC G I+W + +
Sbjct: 14 LLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAG 73
Query: 79 QDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCVRF-DGLSEHS 137
++ IYN K G FP V + T N D+SI I N+T GTY+CV+F G +
Sbjct: 74 PGRELIYNQKEGHFPRVTTVSDLTKRN-NMDFSIRIGNITPADAGTYYCVKFRKGSPDDV 132
Query: 138 EMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPG-PIRWFQ 195
E KS GT + V+ +P ++ T TV C G P ++WF+
Sbjct: 133 EFKSGAGTELSVRA----KPSAPVVS-GPAARATPQHTVSFTCESHGFSPRDITLKWFK 186
>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
[Homo sapiens]
Length = 398
Score = 97.4 bits (241), Expect = 2e-20
Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 10/136 (7%)
Query: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
E +L +IQP + + G++ L+CTV P GPI+WF+GAG RE IYN P+
Sbjct: 30 EEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRV 89
Query: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR-KPNR-QYLSGQGTSLKVKAKSTS 269
T V + +N DFSI + N++ DAGTYYCVKF++ P+ ++ SG GT L V+AK +
Sbjct: 90 TTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPS- 148
Query: 270 SKEAEFTSEPATEMSP 285
A S PA +P
Sbjct: 149 ---APVVSGPAARATP 161
Score = 92.0 bits (227), Expect = 7e-19
Identities = 64/193 (33%), Positives = 92/193 (47%), Gaps = 10/193 (5%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG 64
M P HLP FLL+ L+L +G + + QV+QP+ + VA GE+ L C V
Sbjct: 1 MPVPASWPHLPSPFLLMTLLL--GRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTS 58
Query: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
G I+W + + ++ IYN K G FP V + T N D+SI I N+T GT
Sbjct: 59 LIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRN-NMDFSIRISNITPADAGT 117
Query: 125 YHCVRF-DGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVL 183
Y+CV+F G +H E KS GT + V+ +P ++ T TV C
Sbjct: 118 YYCVKFRKGSPDHVEFKSGAGTELSVRA----KPSAPVVS-GPAARATPQHTVSFTCESH 172
Query: 184 GDGPPG-PIRWFQ 195
G P ++WF+
Sbjct: 173 GFSPRDITLKWFK 185
>gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor
[Homo sapiens]
Length = 398
Score = 94.4 bits (233), Expect = 1e-19
Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 10/136 (7%)
Query: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
E +L +IQP++ V G++ L C + P GPI WF+GAG RE IYN P+
Sbjct: 30 EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRV 89
Query: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 269
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+AK +
Sbjct: 90 TTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS- 148
Query: 270 SKEAEFTSEPATEMSP 285
A S PA +P
Sbjct: 149 ---APVVSGPAVRATP 161
Score = 92.4 bits (228), Expect = 5e-19
Identities = 65/193 (33%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG 64
M P HLP FLL+ L+L +G + ++ QV+QPE + VA GE+ LRC +
Sbjct: 1 MPVPASWPHLPSPFLLMTLLL--GRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTS 58
Query: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
G I W + + ++ IYN K G FP V + + T N D+SI I N+T GT
Sbjct: 59 LIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRN-NLDFSISISNITPADAGT 117
Query: 125 YHCVRF-DGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVL 183
Y+CV+F G + E KS GT + V+ +P ++ V T TV C
Sbjct: 118 YYCVKFRKGSPDDVEFKSGAGTELSVRA----KPSAPVVS-GPAVRATPEHTVSFTCESH 172
Query: 184 GDGPPG-PIRWFQ 195
G P ++WF+
Sbjct: 173 GFSPRDITLKWFK 185
>gi|94538339 signal-regulatory protein gamma isoform 3 precursor
[Homo sapiens]
Length = 276
Score = 92.4 bits (228), Expect = 5e-19
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
E +L +IQP++L+L T G T L+CTV P GP+ WF+G G RE IYN P+
Sbjct: 29 EEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQKEGHFPRV 88
Query: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 269
T V + +N DFSI + +++ D GTYYCVKF++ N ++ SG GT + + AK ++
Sbjct: 89 TTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSA 148
Score = 84.0 bits (206), Expect = 2e-16
Identities = 66/198 (33%), Positives = 93/198 (46%), Gaps = 21/198 (10%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG 64
M P H P FLLL L+L ++ +G+ + Q++QPE +LV G+T L C V
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEE---ELQMIQPEKLLLVTVGKTATLHCTVTS 57
Query: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
G + W + ++ IYN K G FP V + T N D+SI I ++T GT
Sbjct: 58 LLPVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRN-NMDFSIRISSITPADVGT 116
Query: 125 YHCVRF-DGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLG-----TTGDTVFL 178
Y+CV+F G E+ E KS GT + + GA P +VLG T TV
Sbjct: 117 YYCVKFRKGSPENVEFKSGPGTEMAL-GAKPSAP---------VVLGPAARTTPEHTVSF 166
Query: 179 NCTVLGDGPPG-PIRWFQ 195
C G P ++WF+
Sbjct: 167 TCESHGFSPRDITLKWFK 184
>gi|94538335 signal-regulatory protein gamma isoform 1 precursor
[Homo sapiens]
Length = 387
Score = 92.4 bits (228), Expect = 5e-19
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
E +L +IQP++L+L T G T L+CTV P GP+ WF+G G RE IYN P+
Sbjct: 29 EEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQKEGHFPRV 88
Query: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 269
T V + +N DFSI + +++ D GTYYCVKF++ N ++ SG GT + + AK ++
Sbjct: 89 TTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSA 148
Score = 84.0 bits (206), Expect = 2e-16
Identities = 66/198 (33%), Positives = 93/198 (46%), Gaps = 21/198 (10%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG 64
M P H P FLLL L+L ++ +G+ + Q++QPE +LV G+T L C V
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEE---ELQMIQPEKLLLVTVGKTATLHCTVTS 57
Query: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
G + W + ++ IYN K G FP V + T N D+SI I ++T GT
Sbjct: 58 LLPVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRN-NMDFSIRISSITPADVGT 116
Query: 125 YHCVRF-DGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLG-----TTGDTVFL 178
Y+CV+F G E+ E KS GT + + GA P +VLG T TV
Sbjct: 117 YYCVKFRKGSPENVEFKSGPGTEMAL-GAKPSAP---------VVLGPAARTTPEHTVSF 166
Query: 179 NCTVLGDGPPG-PIRWFQ 195
C G P ++WF+
Sbjct: 167 TCESHGFSPRDITLKWFK 184
>gi|144953878 signal-regulatory protein beta 1 isoform 2 precursor
[Homo sapiens]
Length = 181
Score = 90.5 bits (223), Expect = 2e-18
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG 64
M P HLP FLL+ L+L +G + ++ QV+QPE + VA GE+ LRC +
Sbjct: 1 MPVPASWPHLPSPFLLMTLLL--GRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTS 58
Query: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
G I W + + ++ IYN K G FP V + + T N D+SI I N+T GT
Sbjct: 59 LIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRN-NLDFSISISNITPADAGT 117
Query: 125 YHCVRF-DGLSEHSEMKSDEGTSVLVKGA 152
Y+CV+F G + E KS GT + V+ A
Sbjct: 118 YYCVKFRKGSPDDVEFKSGAGTELSVREA 146
Score = 88.2 bits (217), Expect = 1e-17
Identities = 48/115 (41%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
E +L +IQP++ V G++ L C + P GPI WF+GAG RE IYN P+
Sbjct: 30 EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRV 89
Query: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVK 264
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+
Sbjct: 90 TTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
>gi|94538337 signal-regulatory protein gamma isoform 2 precursor
[Homo sapiens]
Length = 170
Score = 90.5 bits (223), Expect = 2e-18
Identities = 49/120 (40%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Query: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
E +L +IQP++L+L T G T L+CTV P GP+ WF+G G RE IYN P+
Sbjct: 29 EEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQKEGHFPRV 88
Query: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 269
T V + +N DFSI + +++ D GTYYCVKF++ N ++ SG GT + + ++S
Sbjct: 89 TTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGGPASS 148
Score = 83.2 bits (204), Expect = 3e-16
Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG 64
M P H P FLLL L+L ++ +G+ + Q++QPE +LV G+T L C V
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEE---ELQMIQPEKLLLVTVGKTATLHCTVTS 57
Query: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
G + W + ++ IYN K G FP V + T N D+SI I ++T GT
Sbjct: 58 LLPVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRN-NMDFSIRISSITPADVGT 116
Query: 125 YHCVRF-DGLSEHSEMKSDEGTSVLVKG 151
Y+CV+F G E+ E KS GT + + G
Sbjct: 117 YYCVKFRKGSPENVEFKSGPGTEMALGG 144
>gi|239751927 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 136
Score = 89.7 bits (221), Expect = 3e-18
Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 6/116 (5%)
Query: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
E +L +IQP++ V G++ L C + P GPI WF+GAG RE IYN P+
Sbjct: 13 EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRV 72
Query: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKA 265
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+A
Sbjct: 73 TTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 128
Score = 80.1 bits (196), Expect = 3e-15
Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 32 GQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYNFKRGS 91
G + ++ QV+QPE + VA GE+ LRC + G I W + + ++ IYN K G
Sbjct: 9 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
Query: 92 FPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCVRF-DGLSEHSEMKSDEGTSVLVK 150
FP V + + T N D+SI I N+T GTY+CV+F G + E KS GT + V+
Sbjct: 69 FPRVTTVSELTKRN-NLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 127
Query: 151 GAGDPEPDLW 160
+P LW
Sbjct: 128 A----DPALW 133
>gi|169217521 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 160
Score = 88.6 bits (218), Expect = 7e-18
Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
Query: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
E +L +IQP++ V G++ L C + P GPI WF+GAG RE IYN P+
Sbjct: 13 EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRV 72
Query: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAK 266
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+ +
Sbjct: 73 TTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRGE 129
Score = 79.7 bits (195), Expect = 3e-15
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 32 GQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYNFKRGS 91
G + ++ QV+QPE + VA GE+ LRC + G I W + + ++ IYN K G
Sbjct: 9 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
Query: 92 FPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCVRF-DGLSEHSEMKSDEGTSVLVK 150
FP V + + T N D+SI I N+T GTY+CV+F G + E KS GT + V+
Sbjct: 69 FPRVTTVSELTKRN-NLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 127
Query: 151 G 151
G
Sbjct: 128 G 128
>gi|30425382 signal-regulatory protein delta [Homo sapiens]
Length = 197
Score = 78.6 bits (192), Expect = 8e-15
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 171 TTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNF--GGISHPKE--TAVQASNNDFS 226
+TG+++ L+C+V P GP+ WF+G G +R+ IYNF G KE + N DFS
Sbjct: 42 STGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFS 101
Query: 227 ILLQNVSSEDAGTYYCVKF-QRKPNRQYLSGQGTSLKV 263
++ +S DAGTYYCVKF + + ++Y SG+GT + V
Sbjct: 102 TRIREISLADAGTYYCVKFIKGRAIKEYQSGRGTQVFV 139
Score = 73.9 bits (180), Expect = 2e-13
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG 64
M P H P LLL L+L + + + + V Q E V+ GE+++L C V
Sbjct: 1 MPIPASPLHPPLPSLLLYLLLELAGVT-----HVFHVQQTEMSQTVSTGESIILSCSVPD 55
Query: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
+ +G + W K + +++ IYNFK+G+FP V I T++P N D+S I ++ GT
Sbjct: 56 TLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKE-IGDTTKPGNTDFSTRIREISLADAGT 114
Query: 125 YHCVRFDGLSEHSEMKSDEGTSVLV 149
Y+CV+F E +S GT V V
Sbjct: 115 YYCVKFIKGRAIKEYQSGRGTQVFV 139
>gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo
sapiens]
Length = 532
Score = 53.9 bits (128), Expect = 2e-07
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 72 KWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCVRFD 131
KW K + Q+ IY+ K G FP + I ++ N D+S+ I ++TR +TGTY+CV+F
Sbjct: 431 KWFKGTETGQELIYSSKGGHFPKIA-CISDITKRNNTDFSMCITSITRANTGTYNCVKFW 489
Query: 132 GLSEHSEMKSDEGTSVLV 149
E+KS GT + V
Sbjct: 490 KGGPDMELKSGPGTELSV 507
Score = 53.1 bits (126), Expect = 3e-07
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 190 PIRWFQGAGLSREAIYNFGGISHPKETAV----QASNNDFSILLQNVSSEDAGTYYCVKF 245
P +WF+G +E IY+ G PK + + +N DFS+ + +++ + GTY CVKF
Sbjct: 429 PEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKF 488
Query: 246 QR-KPNRQYLSGQGTSLKVKAK 266
+ P+ + SG GT L V ++
Sbjct: 489 WKGGPDMELKSGPGTELSVHSE 510
>gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens]
Length = 2623
Score = 45.8 bits (107), Expect = 6e-05
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 50 VAEGETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCD 109
V G T+ L+C G + + W+ + Q + +GS V+ + D
Sbjct: 1757 VHSGSTVELKCRAEGRPSP-TVTWILAN---QTVVSESSQGSRQAVVTV----------D 1802
Query: 110 YSIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVL 169
++ +HN++ G Y CV + + S +LVK P + + Q +++++
Sbjct: 1803 GTLVLHNLSIYDRGFYKCVASNPGGQDS---------LLVKIQVIAAPPVILEQRRQVIV 1853
Query: 170 GTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILL 229
GT G+++ L CT G P + W G + + SN ++ +
Sbjct: 1854 GTWGESLKLPCTAKGTPQPS-VYWVLSDGTEVKP------LQFTNSKLFLFSNG--TLYI 1904
Query: 230 QNVSSEDAGTYYCVK-----FQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSEPATEMS 284
+N++S D GTY C+ +R+ + + TS +++A S E F + S
Sbjct: 1905 RNLASSDRGTYECIATSSTGSERRVVMLTMEERVTSPRIEAASQKRTEVNFGDKLLLNCS 1964
Query: 285 PTG 287
TG
Sbjct: 1965 ATG 1967
Score = 33.9 bits (76), Expect = 0.22
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 24/137 (17%)
Query: 111 SIYIHNVTREHTGTYHCVRFDGLSEHSEM----KSDEGTSVLVKGAGDPEPDLWIIQPQE 166
++YI N+ GTY C+ + + TS ++ A ++
Sbjct: 1901 TLYIRNLASSDRGTYECIATSSTGSERRVVMLTMEERVTSPRIEAASQKRTEV------- 1953
Query: 167 LVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFS 226
GD + LNC+ G+ P I W + + + G H S
Sbjct: 1954 ----NFGDKLLLNCSATGEPKP-QIMWRLPSKAVVDQQHRVGSWIHVYPNG--------S 2000
Query: 227 ILLQNVSSEDAGTYYCV 243
+ + +V+ +D+G Y CV
Sbjct: 2001 LFIGSVTEKDSGVYLCV 2017
Score = 30.0 bits (66), Expect = 3.1
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 111 SIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLG 170
S I TRE G Y C + +++ E +L G +P + P V G
Sbjct: 2395 SFIISKTTREDAGKYRC------AARNKVGYIEKLVILEIG---QKPVILTYAP-GTVKG 2444
Query: 171 TTGDTVFLNCTVLGDGPPGP-IRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILL 229
+G+++ L+C + DG P P I+W +G + P+ +++ ++++
Sbjct: 2445 ISGESLSLHC--VSDGIPKPNIKWTMPSGYV---------VDRPQINGKYILHDNGTLVI 2493
Query: 230 QNVSSEDAGTYYC 242
+ ++ D G Y C
Sbjct: 2494 KEATAYDRGNYIC 2506
Score = 29.3 bits (64), Expect = 5.3
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 166 ELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDF 225
E ++ G + LNC+V G+ PP I W L ++ G S+ + ASN F
Sbjct: 2345 EKIVAQLGKSTALNCSVDGN-PPPEIIWI----LPNGTRFSNGPQSY---QYLIASNGSF 2396
Query: 226 SILLQNVSSEDAGTYYC 242
++ + EDAG Y C
Sbjct: 2397 --IISKTTREDAGKYRC 2411
Score = 28.9 bits (63), Expect = 7.0
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 10/72 (13%)
Query: 173 GDTVFLNCTVLGDGPPGP-IRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILLQN 231
G TV LNC G G P P + W G A Y +S + S + LQ
Sbjct: 490 GGTVGLNCP--GQGDPTPHVDWLLADGSKVRAPY----VSEDGRILIDKSGK---LELQM 540
Query: 232 VSSEDAGTYYCV 243
S D G Y+C+
Sbjct: 541 ADSFDTGVYHCI 552
>gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo
sapiens]
Length = 2113
Score = 44.7 bits (104), Expect = 1e-04
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Query: 111 SIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQP--QELV 168
S+ I +V+ +H G Y C+ + + S + ++V+ P +++QP Q+ +
Sbjct: 713 SLQISSVSLKHNGNYTCIASNAAATVSRERQ-----LIVR-----VPPRFVVQPNNQDGI 762
Query: 169 LGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSIL 228
G G LNC+V G PP + W G Y+ P +Q N S+L
Sbjct: 763 YGKAG---VLNCSVDGYPPP-KVMWKHAKGSGNPQQYH----PVPLTGRIQILPNS-SLL 813
Query: 229 LQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSEPATEMSPTG 287
+++V ED G Y C Q +G GT + T A TS P T ++ G
Sbjct: 814 IRHVLEEDIGYYLC---------QASNGVGTDISKSMFLTVKIPAMITSHPNTTIAIKG 863
>gi|110431348 deleted in colorectal carcinoma [Homo sapiens]
Length = 1447
Score = 43.5 bits (101), Expect = 3e-04
Identities = 49/200 (24%), Positives = 77/200 (38%), Gaps = 37/200 (18%)
Query: 53 GETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSI 112
G+T+LL+C V+G I W K +QQ++ S V+P ++
Sbjct: 154 GDTVLLKCEVIGEPMP-TIHWQK----NQQDLTPIPGDSRVVVLP-----------SGAL 197
Query: 113 YIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDP--EPDLWIIQPQELVLG 170
I + G Y C S + S G V+ DP L+ +Q V+
Sbjct: 198 QISRLQPGDIGIYRC------SARNPASSRTGNEAEVRILSDPGLHRQLYFLQRPSNVVA 251
Query: 171 TTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILLQ 230
G L C V G PP W +G + + + K + + SN +L+
Sbjct: 252 IEGKDAVLECCVSGYPPPS-FTWLRGEEVIQ--------LRSKKYSLLGGSN----LLIS 298
Query: 231 NVSSEDAGTYYCVKFQRKPN 250
NV+ +D+G Y CV + N
Sbjct: 299 NVTDDDSGMYTCVVTYKNEN 318
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 42.4 bits (98), Expect = 6e-04
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 25/133 (18%)
Query: 111 SIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLG 170
S+ IH R+ G Y C+ +EM + +LV + ++ ++PQ++ +
Sbjct: 3081 SLTIHRTERDDAGRYQCLA------ENEMGVAKKVVILVLQSAP----VFQVEPQDMTV- 3129
Query: 171 TTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILLQ 230
+GD V L C G+ P I W Q AG A + D S+ L+
Sbjct: 3130 RSGDDVALRCQATGEPTP-TIEWLQ-AGQPLRASRRLRTLP------------DGSLWLE 3175
Query: 231 NVSSEDAGTYYCV 243
NV + DAGTY CV
Sbjct: 3176 NVETGDAGTYDCV 3188
Score = 36.2 bits (82), Expect = 0.044
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 21/137 (15%)
Query: 107 NCDYSIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQE 166
N S+++ HTG Y CV + L+ +E K + SVLV P + + P
Sbjct: 1118 NQGQSLHVERAQAAHTGRYSCVA-ENLAGRAERKFE--LSVLV-----PPELIGDLDPLT 1169
Query: 167 LVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFS 226
+ + L C +G PP IRWF+G +S ++T + A +
Sbjct: 1170 NITAALHSPLTLLCEAMGIPPPA-IRWFRGE----------EPVSPGEDTYLLAGG--WM 1216
Query: 227 ILLQNVSSEDAGTYYCV 243
+ + +D+G Y C+
Sbjct: 1217 LKMTQTQEQDSGLYSCL 1233
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 42.4 bits (98), Expect = 6e-04
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 25/133 (18%)
Query: 111 SIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLG 170
S+ IH R+ G Y C+ +EM + +LV + ++ ++PQ++ +
Sbjct: 4272 SLTIHRTERDDAGRYQCLA------ENEMGVAKKVVILVLQSAP----VFQVEPQDMTV- 4320
Query: 171 TTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILLQ 230
+GD V L C G+ P I W Q AG A + D S+ L+
Sbjct: 4321 RSGDDVALRCQATGEPTP-TIEWLQ-AGQPLRASRRLRTLP------------DGSLWLE 4366
Query: 231 NVSSEDAGTYYCV 243
NV + DAGTY CV
Sbjct: 4367 NVETGDAGTYDCV 4379
Score = 36.2 bits (82), Expect = 0.044
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 21/137 (15%)
Query: 107 NCDYSIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQE 166
N S+++ HTG Y CV + L+ +E K + SVLV P + + P
Sbjct: 2309 NQGQSLHVERAQAAHTGRYSCVA-ENLAGRAERKFE--LSVLV-----PPELIGDLDPLT 2360
Query: 167 LVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFS 226
+ + L C +G PP IRWF+G +S ++T + A +
Sbjct: 2361 NITAALHSPLTLLCEAMGIPPPA-IRWFRGE----------EPVSPGEDTYLLAGG--WM 2407
Query: 227 ILLQNVSSEDAGTYYCV 243
+ + +D+G Y C+
Sbjct: 2408 LKMTQTQEQDSGLYSCL 2424
Score = 32.0 bits (71), Expect = 0.82
Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 24/130 (18%)
Query: 114 IHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGTTG 173
I ++ GTY C ++ G + DP P L P V + G
Sbjct: 483 ILRASKAEEGTYECTAVS--------RAGTGRAKAQIVVTDPPPQL---VPAPNVTVSPG 531
Query: 174 DTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILLQNVS 233
+T L+C VLG+ P + W + + P T A D S+ + +
Sbjct: 532 ETAVLSCRVLGEAPYN-LTWVRDWRVL------------PASTGRVAQLADLSLEISGII 578
Query: 234 SEDAGTYYCV 243
D G Y CV
Sbjct: 579 PTDGGRYQCV 588
>gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42
precursor [Homo sapiens]
Length = 2012
Score = 42.0 bits (97), Expect = 8e-04
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 35/191 (18%)
Query: 53 GETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSI 112
G+ + + C+VV I W K D + I PG + + T + ++ S+
Sbjct: 610 GQRVFIPCVVVSGDLPITITWQK----DGRPI--------PGSLGV---TIDNIDFTSSL 654
Query: 113 YIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGTT 172
I N++ H G Y C+ +E + E S L+ P +++QP++ G
Sbjct: 655 RISNLSLMHNGNYTCIA------RNEAAAVEHQSQLIVRV----PPKFVVQPRDQD-GIY 703
Query: 173 GDTVFLNCTVLGDGPPGPI-RWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILLQN 231
G V LNC+ G P + ++ +GAG+ + G +Q +N S+L+++
Sbjct: 704 GKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNG-------RIQVLSNG-SLLIKH 755
Query: 232 VSSEDAGTYYC 242
V ED+G Y C
Sbjct: 756 VVEEDSGYYLC 766
Score = 32.0 bits (71), Expect = 0.82
Identities = 38/178 (21%), Positives = 69/178 (38%), Gaps = 28/178 (15%)
Query: 112 IYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGT 171
+ I N+ +G+Y C E+ + GT+ ++ +P I P++ V +
Sbjct: 278 LLIENIRPSDSGSYVC----------EVSNRYGTAKVIGRLYVKQPLKATISPRK-VKSS 326
Query: 172 TGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILLQN 231
G V L+C+V G + W++ G I +P + N ++++ +
Sbjct: 327 VGSQVSLSCSVTGTEDQ-ELSWYRN-----------GEILNPGKNVRITGINHENLIMDH 374
Query: 232 VSSEDAGTYYCVKFQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSEPATEMSPTGLL 289
+ D G Y C F RK LS Q V T + F+ + + P L+
Sbjct: 375 MVKSDGGAYQC--FVRKDK---LSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVSLM 427
Score = 29.6 bits (65), Expect = 4.1
Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 14/84 (16%)
Query: 162 IQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQAS 221
IQP E + G VF+ C V+ P I W + G P V
Sbjct: 599 IQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQK------------DGRPIPGSLGVTID 646
Query: 222 NNDF--SILLQNVSSEDAGTYYCV 243
N DF S+ + N+S G Y C+
Sbjct: 647 NIDFTSSLRISNLSLMHNGNYTCI 670
>gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo
sapiens]
Length = 523
Score = 40.8 bits (94), Expect = 0.002
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 27/137 (19%)
Query: 14 LPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG--SCTDGMI 71
LP LLL L+L+ S + S++ + V+ P P+L GE LRC + + D +
Sbjct: 11 LPASLLLLLLLLLLSLCALVSAQ--FTVVGPANPILAMVGENTTLRCHLSPEKNAEDMEV 68
Query: 72 KWVKVS--------------TQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNV 117
+W + T++Q E Y RG V I R S ++ IHNV
Sbjct: 69 RWFRSQFSPAVFVYKGGRERTEEQMEEY---RGRITFVSKDINRGS------VALVIHNV 119
Query: 118 TREHTGTYHCVRFDGLS 134
T + G Y C +G S
Sbjct: 120 TAQENGIYRCYFQEGRS 136
>gi|27894376 cell adhesion molecule with homology to L1CAM precursor
[Homo sapiens]
Length = 1224
Score = 40.4 bits (93), Expect = 0.002
Identities = 63/276 (22%), Positives = 102/276 (36%), Gaps = 60/276 (21%)
Query: 23 LVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVGSCTDGMIKWVKVSTQDQQ 82
L+L P+++ +SS + + +GE LLL C G T + W K+
Sbjct: 253 LLLPPTESGSESS------------ITILKGEILLLECFAEGLPTP-QVDWNKIG----- 294
Query: 83 EIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCV--RFDGLSEHSEMK 140
G +P + T E N ++ I NV+ + G Y C F G + H
Sbjct: 295 -----------GDLPKGRETKE--NYGKTLKIENVSYQDKGNYRCTASNFLGTATHD--- 338
Query: 141 SDEGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRW-FQGAGL 199
V+V+ EP W +PQ V +TG L C G+ P I+W G+ +
Sbjct: 339 ----FHVIVE-----EPPRWTKKPQSAVY-STGSNGILLCEAEGE-PQPTIKWRVNGSPV 387
Query: 200 SREAIYNFGGISHPKETAVQASNNDFSILLQNVSSEDAGTYYC----------VKFQRKP 249
G + P+E + + + + Q +S GT Q K
Sbjct: 388 DNHPF--AGDVVFPREISFTNLQPNHTAVYQCEASNVHGTILANANIDVVDVRPLIQTKD 445
Query: 250 NRQYLSGQGTSLKVKAKSTSSKEAEFTSEPATEMSP 285
Y + G S + + +S EA + + E+ P
Sbjct: 446 GENYATVVGYSAFLHCEFFASPEAVVSWQKVEEVKP 481
>gi|24111244 MAM domain containing glycosylphosphatidylinositol
anchor 1 [Homo sapiens]
Length = 955
Score = 40.4 bits (93), Expect = 0.002
Identities = 56/240 (23%), Positives = 88/240 (36%), Gaps = 44/240 (18%)
Query: 17 CFLLLALVLVPSDASGQSSRNDWQVLQP------------EGPMLVAEGETLLLRCMVVG 64
C LLLAL+ G + Q++ E + EG+TL+L+C+V G
Sbjct: 5 CLLLLALIPFHCRGQGVYAPAQAQIVHAGQACVVKEDNISERVYTIREGDTLMLQCLVTG 64
Query: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
++W K + + Q TS + ++ I + R G
Sbjct: 65 H-PRPQVRWTKTAGSASDK---------------FQETSV---FNETLRIERIARTQGGR 105
Query: 125 YHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGT--TGDTVFLNCTV 182
Y+C +G+ + S+ V EP L + Q V G TVFL CTV
Sbjct: 106 YYCKAENGVGVPAI------KSIRVDVQYLDEPMLTVHQTVSDVRGNFYQEKTVFLRCTV 159
Query: 183 LGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILLQNVSSEDAGTYYC 242
PP W +G+ + N I P T + + L+N+ +D +Y C
Sbjct: 160 -NSNPPARFIWKRGSDTLSHSQDNGVDIYEPLYTQGETK----VLKLKNLRPQDYASYTC 214
>gi|145275198 ADAMTS-like 3 precursor [Homo sapiens]
Length = 1691
Score = 40.0 bits (92), Expect = 0.003
Identities = 41/138 (29%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 112 IYIHNVTREHTGTYHCVRFDGLSEHSEMKS---DEGTSVLV--KGAGDPEPDLWIIQPQE 166
I I N TR+ G Y C + L E S E +L + PE + +
Sbjct: 1248 IQIQNPTRKEQGIYECSVANHLGSDVESSSVLYAEAPVILSVERNITKPEHNHLSVVVGG 1307
Query: 167 LVLGTTGDTVFLNCTVLGDGPPGPIRWFQ-GAGLSREAIYNFGGISHPKETAVQASNNDF 225
+V G V + C V G P I W + G LS F G
Sbjct: 1308 IVEAALGANVTIRCPVKGVPQPN-ITWLKRGGSLSGNVSLLFNG---------------- 1350
Query: 226 SILLQNVSSEDAGTYYCV 243
S+LLQNVS E+ GTY C+
Sbjct: 1351 SLLLQNVSLENEGTYVCI 1368
>gi|157311649 neogenin homolog 1 [Homo sapiens]
Length = 1461
Score = 39.7 bits (91), Expect = 0.004
Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 30/189 (15%)
Query: 112 IYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPE--PDLWIIQPQELVL 169
+ I N T G Y CV G SDE V +K DPE DL ++ ++
Sbjct: 206 LVISNATEGDGGLYRCVVESG---GPPKYSDE---VELKVLPDPEVISDLVFLKQPSPLV 259
Query: 170 GTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILL 229
G V L C G P I+W + + EA+ + E V + S+ +
Sbjct: 260 RVIGQDVVLPCVASGLPTP-TIKWMK----NEEALD-----TESSERLVLLAGG--SLEI 307
Query: 230 QNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSEPATEMSPTGLL 289
+V+ +DAGTY+C+ +++ +A+ T + EF +P + +
Sbjct: 308 SDVTEDDAGTYFCI----------ADNGNETIEAQAELTVQAQPEFLKQPTNIYAHESMD 357
Query: 290 VVFAPVVLG 298
+VF V G
Sbjct: 358 IVFECEVTG 366
Score = 31.2 bits (69), Expect = 1.4
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 37/167 (22%)
Query: 37 NDWQVLQPEGPMLVAEGETLLLRCMVVGSCTDGMIKWVK----VSTQDQQEIYNFKRGSF 92
+D L+ P++ G+ ++L C+ G T IKW+K + T+ + + GS
Sbjct: 247 SDLVFLKQPSPLVRVIGQDVVLPCVASGLPTP-TIKWMKNEEALDTESSERLVLLAGGS- 304
Query: 93 PGVMPMIQRTSEPLNCDYSIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGA 152
+ I +VT + GTY C+ +G +E E +++ +
Sbjct: 305 -------------------LEISDVTEDDAGTYFCIADNG-NETIEAQAE------LTVQ 338
Query: 153 GDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGL 199
PE ++ QP + + D VF C V G P ++W + +
Sbjct: 339 AQPE---FLKQPTNIYAHESMDIVF-ECEVTGK-PTPTVKWVKNGDM 380
>gi|15147240 brother of CDO [Homo sapiens]
Length = 1114
Score = 39.7 bits (91), Expect = 0.004
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 35/195 (17%)
Query: 50 VAEGETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCD 109
V EG T ++ C + S +++ +QE RG++ +MP
Sbjct: 140 VDEGNTAVIACHLPESHPKAQVRY-----SVKQEWLEASRGNYL-IMP-----------S 182
Query: 110 YSIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQ-ELV 168
++ I N ++E G Y C ++ +++ E+K+ + L E I P+ + +
Sbjct: 183 GNLQIVNASQEDEGMYKCAAYNPVTQ--EVKTSGSSDRLRVRRSTAEAARIIYPPEAQTI 240
Query: 169 LGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSIL 228
+ T G ++ L C G PP + W + ++ +T SN +L
Sbjct: 241 IVTKGQSLILECVASGIPPPR-VTWAKDGS----------SVTGYNKTRFLLSN----LL 285
Query: 229 LQNVSSEDAGTYYCV 243
+ S ED+GTY C+
Sbjct: 286 IDTTSEEDSGTYRCM 300
Score = 37.0 bits (84), Expect = 0.026
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 29/150 (19%)
Query: 48 MLVAEGETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLN 107
++V +G++L+L C+ G + W K D + + + F +I TSE
Sbjct: 240 IIVTKGQSLILECVASG-IPPPRVTWAK----DGSSVTGYNKTRFLLSNLLIDTTSE--- 291
Query: 108 CDYSIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQEL 167
E +GTY C+ +G+ + G +V++ EP ++ +L
Sbjct: 292 ------------EDSGTYRCMADNGVGQ-------PGAAVILYNVQVFEPPEVTMELSQL 332
Query: 168 VLGTTGDTVFLNCTVLGDGPPGPIRWFQGA 197
V+ G + L C V G+ PP + W + A
Sbjct: 333 VI-PWGQSAKLTCEVRGNPPPS-VLWLRNA 360
Score = 30.4 bits (67), Expect = 2.4
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Query: 214 KETAVQASNNDFSIL------LQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLKVKAKS 267
K+ ++AS ++ I+ + N S ED G Y C + SG L+V+ +
Sbjct: 166 KQEWLEASRGNYLIMPSGNLQIVNASQEDEGMYKCAAYNPVTQEVKTSGSSDRLRVRRST 225
Query: 268 TSSKEAEFTSEPATEMSPTGLLVVFAPVVLGL 299
+ + E T + G ++ V G+
Sbjct: 226 AEAARIIYPPEAQTIIVTKGQSLILECVASGI 257
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 39.3 bits (90), Expect = 0.005
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 25/133 (18%)
Query: 111 SIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLG 170
S+ I R+ G Y C+ +EM + +LV + ++ ++PQ++ +
Sbjct: 2990 SLTIRRTERDDAGRYQCLA------ENEMGVAKKVVILVLQSAP----VFQVEPQDMTV- 3038
Query: 171 TTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFSILLQ 230
+GD V L C G+ P I W Q AG A + D S+ L+
Sbjct: 3039 RSGDDVALRCQATGEPTP-TIEWLQ-AGQPLRASRRLRTLP------------DGSLWLE 3084
Query: 231 NVSSEDAGTYYCV 243
NV + DAGTY CV
Sbjct: 3085 NVETGDAGTYDCV 3097
Score = 36.2 bits (82), Expect = 0.044
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 21/137 (15%)
Query: 107 NCDYSIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQE 166
N S+++ HTG Y CV + L+ +E K + SVLV P + + P
Sbjct: 1027 NQGQSLHVERAQAAHTGRYSCVA-ENLAGRAERKFE--LSVLV-----PPELIGDLDPLT 1078
Query: 167 LVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFS 226
+ + L C +G PP IRWF+G +S ++T + A +
Sbjct: 1079 NITAALHSPLTLLCEAMGIPPPA-IRWFRGE----------EPVSPGEDTYLLAGG--WM 1125
Query: 227 ILLQNVSSEDAGTYYCV 243
+ + +D+G Y C+
Sbjct: 1126 LKMTQTQEQDSGLYSCL 1142
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,675,874
Number of Sequences: 37866
Number of extensions: 702865
Number of successful extensions: 2872
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 2205
Number of HSP's gapped (non-prelim): 763
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.