Guide to the Human Genome
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Name: SIRPG Sequence: fasta or formatted (387aa) NCBI GI: 94538335
Description:

signal-regulatory protein gamma isoform 1 precursor

Referenced in:

Additional Genes in Development
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [170aa] signal-regulatory protein gamma isoform 2 precursor
alt prot [276aa] signal-regulatory protein gamma isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         21           2
 C cysteine            1.8          7           1
 D aspartate           4.1         16           2
 E glutamate           5.2         20           3
 F phenylalanine       3.1         12           1
 G glycine             6.7         26           1
 H histidine           2.1          8           1
 I isoleucine          3.1         12           1
 K lysine              4.4         17           1
 L leucine            10.3         40           3
 M methionine          1.3          5           1
 N asparagine          3.9         15           2
 P proline             7.8         30           2
 Q glutamine           5.2         20           2
 R arginine            4.7         18           1
 S serine              7.2         28           2
 T threonine           9.6         37           2
 V valine             10.3         40           2
 W tryptophan          2.1          8           1
 Y tyrosine            1.8          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal-regulatory protein gamma isoform 1 precursor ... 
SIRPB1                0.788   signal-regulatory protein beta 1 isoform 3 precurso...
SIRPB1                0.763   signal-regulatory protein beta 1 isoform 1 precurso...
SIRPA                 0.703   signal-regulatory protein alpha precursor 
SIRPA                 0.703   signal-regulatory protein alpha precursor 
SIRPA                 0.703   signal-regulatory protein alpha precursor 
SIRPG                 0.636   signal-regulatory protein gamma isoform 3 precursor ...
SIRPG                 0.357   signal-regulatory protein gamma isoform 2 precursor ...
SIRPB1                0.276   signal-regulatory protein beta 1 isoform 2 precurso...
LOC654056             0.229   PREDICTED: similar to signal-regulatory protein bet...
LOC654056             0.225   PREDICTED: similar to signal-regulatory protein bet...
LOC100294049          0.173   PREDICTED: similar to hCG2019710 
LOC100291000          0.173   PREDICTED: hypothetical protein XP_002348043 
SIRPD                 0.149   signal-regulatory protein delta 
LOC100289473          0.116   PREDICTED: hypothetical protein XP_002344218 
SIRPB2                0.093   signal-regulatory protein beta 2 isoform 2 
SIRPB2                0.088   signal-regulatory protein beta 2 isoform 1 
LOC654055             0.086   PREDICTED: similar to signal-regulatory protein alp...
CADM3                 0.047   cell adhesion molecule 3 isoform 2 
CADM3                 0.047   cell adhesion molecule 3 isoform 1 
LOC100294459          0.041   PREDICTED: similar to immunoglobulin lambda-like po...
CADM2                 0.039   immunoglobulin superfamily, member 4D 
MICB                  0.034   MHC class I polypeptide-related sequence B 
LOC100293977          0.033   PREDICTED: similar to major histocompatibility comp...
LOC100294191          0.033   PREDICTED: similar to major histocompatibility comp...
MICA                  0.031   MHC class I polypeptide-related sequence A 
HLA-DPB1              0.031   major histocompatibility complex, class II, DP beta ...
NPHS1                 0.030   nephrin precursor 
LOC100133583          0.029   PREDICTED: similar to major histocompatibility comp...
LOC100133583          0.029   PREDICTED: similar to major histocompatibility comp...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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