Guide to the Human Genome
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Name: SIRPG Sequence: fasta or formatted (276aa) NCBI GI: 94538339
Description:

signal-regulatory protein gamma isoform 3 precursor

Referenced in:

Additional Genes in Development
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [387aa] signal-regulatory protein gamma isoform 1 precursor
alt prot [170aa] signal-regulatory protein gamma isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         17           2
 C cysteine            1.4          4           1
 D aspartate           3.3          9           1
 E glutamate           5.4         15           3
 F phenylalanine       3.6         10           1
 G glycine             8.0         22           1
 H histidine           2.2          6           1
 I isoleucine          4.0         11           1
 K lysine              4.3         12           1
 L leucine            11.2         31           3
 M methionine          1.4          4           1
 N asparagine          2.9          8           2
 P proline             9.1         25           2
 Q glutamine           2.9          8           1
 R arginine            4.7         13           1
 S serine              7.2         20           2
 T threonine           9.1         25           2
 V valine              9.4         26           2
 W tryptophan          1.8          5           1
 Y tyrosine            1.8          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal-regulatory protein gamma isoform 3 precursor ... 
SIRPG                 0.905   signal-regulatory protein gamma isoform 1 precursor ...
SIRPB1                0.760   signal-regulatory protein beta 1 isoform 3 precurso...
SIRPB1                0.739   signal-regulatory protein beta 1 isoform 1 precurso...
SIRPA                 0.687   signal-regulatory protein alpha precursor 
SIRPA                 0.687   signal-regulatory protein alpha precursor 
SIRPA                 0.687   signal-regulatory protein alpha precursor 
SIRPG                 0.508   signal-regulatory protein gamma isoform 2 precursor ...
SIRPB1                0.393   signal-regulatory protein beta 1 isoform 2 precurso...
LOC654056             0.326   PREDICTED: similar to signal-regulatory protein bet...
LOC654056             0.320   PREDICTED: similar to signal-regulatory protein bet...
LOC100294049          0.246   PREDICTED: similar to hCG2019710 
LOC100291000          0.246   PREDICTED: hypothetical protein XP_002348043 
SIRPD                 0.212   signal-regulatory protein delta 
LOC100289473          0.166   PREDICTED: hypothetical protein XP_002344218 
SIRPB2                0.132   signal-regulatory protein beta 2 isoform 2 
SIRPB2                0.125   signal-regulatory protein beta 2 isoform 1 
CADM3                 0.050   cell adhesion molecule 3 isoform 2 
CADM3                 0.050   cell adhesion molecule 3 isoform 1 
CADM2                 0.050   immunoglobulin superfamily, member 4D 
LOC100291682          0.041   PREDICTED: similar to hCG1686089 
LOC100290992          0.041   PREDICTED: hypothetical protein XP_002347049 
F11R                  0.041   F11 receptor precursor 
LOC440871             0.039   PREDICTED: similar to hCG2043206 
LOC100294459          0.037   PREDICTED: similar to immunoglobulin lambda-like po...
LOC100291786          0.037   PREDICTED: similar to hCG2043206 
CD80                  0.034   CD80 antigen precursor 
TAPBPL                0.034   TAP binding protein-like 
VSIG1                 0.032   V-set and immunoglobulin domain containing 1 
LOC100291027          0.032   PREDICTED: hypothetical protein XP_002348323 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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