Guide to the Human Genome
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Name: SIRPB2 Sequence: fasta or formatted (244aa) NCBI GI: 198386341
Description:

signal-regulatory protein beta 2 isoform 2

Referenced in:

Additional Genes in Development
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [342aa] signal-regulatory protein beta 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         23           2
 C cysteine            2.0          5           1
 D aspartate           3.7          9           1
 E glutamate           5.3         13           1
 F phenylalanine       3.3          8           1
 G glycine             9.0         22           2
 H histidine           0.8          2           1
 I isoleucine          2.9          7           2
 K lysine              4.1         10           1
 L leucine            11.9         29           3
 M methionine          2.0          5           1
 N asparagine          3.3          8           2
 P proline             7.8         19           2
 Q glutamine           5.3         13           1
 R arginine            2.9          7           2
 S serine              9.0         22           2
 T threonine           7.4         18           2
 V valine              6.6         16           2
 W tryptophan          1.6          4           1
 Y tyrosine            1.6          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal-regulatory protein beta 2 isoform 2 
SIRPB2                0.782   signal-regulatory protein beta 2 isoform 1 
SIRPB1                0.161   signal-regulatory protein beta 1 isoform 3 precurso...
SIRPA                 0.158   signal-regulatory protein alpha precursor 
SIRPA                 0.158   signal-regulatory protein alpha precursor 
SIRPA                 0.158   signal-regulatory protein alpha precursor 
SIRPB1                0.156   signal-regulatory protein beta 1 isoform 1 precurso...
SIRPG                 0.152   signal-regulatory protein gamma isoform 3 precursor ...
SIRPG                 0.152   signal-regulatory protein gamma isoform 1 precursor ...
SIRPG                 0.148   signal-regulatory protein gamma isoform 2 precursor ...
SIRPB1                0.143   signal-regulatory protein beta 1 isoform 2 precurso...
LOC654056             0.139   PREDICTED: similar to signal-regulatory protein bet...
LOC654056             0.137   PREDICTED: similar to signal-regulatory protein bet...
LOC100294049          0.118   PREDICTED: similar to hCG2019710 
LOC100291000          0.118   PREDICTED: hypothetical protein XP_002348043 
SIRPD                 0.116   signal-regulatory protein delta 
LOC100289473          0.060   PREDICTED: hypothetical protein XP_002344218 
ROR2                  0.043   receptor tyrosine kinase-like orphan receptor 2 prec...
FGFR3                 0.032   fibroblast growth factor receptor 3 isoform 3 precu...
FGFR3                 0.032   fibroblast growth factor receptor 3 isoform 2 precur...
FGFR3                 0.032   fibroblast growth factor receptor 3 isoform 1 precurs...
DSCAML1               0.028   Down syndrome cell adhesion molecule like 1 
IGSF10                0.026   immunoglobulin superfamily, member 10 
IGSF9B                0.026   immunoglobulin superfamily, member 9B 
PDCD1                 0.024   programmed cell death 1 precursor 
LAG3                  0.024   lymphocyte-activation protein 3 precursor 
HMCN2                 0.021   PREDICTED: hemicentin 2 
LOC100130100          0.021   PREDICTED: similar to hCG26659 
HMCN2                 0.021   PREDICTED: hemicentin 2 
LOC100291464          0.021   PREDICTED: hypothetical protein XP_002346449 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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