Guide to the Human Genome
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Name: SIRPB2 Sequence: fasta or formatted (342aa) NCBI GI: 171906611
Description:

signal-regulatory protein beta 2 isoform 1

Referenced in:

Additional Genes in Development
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [244aa] signal-regulatory protein beta 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         23           2
 C cysteine            2.6          9           1
 D aspartate           4.1         14           1
 E glutamate           5.8         20           1
 F phenylalanine       3.2         11           1
 G glycine             8.8         30           2
 H histidine           1.8          6           1
 I isoleucine          3.5         12           2
 K lysine              4.4         15           1
 L leucine            10.2         35           3
 M methionine          2.9         10           1
 N asparagine          3.2         11           2
 P proline             6.4         22           2
 Q glutamine           5.0         17           2
 R arginine            3.5         12           2
 S serine              9.1         31           2
 T threonine           7.6         26           2
 V valine              7.3         25           2
 W tryptophan          1.5          5           1
 Y tyrosine            2.3          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal-regulatory protein beta 2 isoform 1 
SIRPB2                0.545   signal-regulatory protein beta 2 isoform 2 
LOC100294049          0.148   PREDICTED: similar to hCG2019710 
LOC100291000          0.148   PREDICTED: hypothetical protein XP_002348043 
SIRPA                 0.110   signal-regulatory protein alpha precursor 
SIRPA                 0.110   signal-regulatory protein alpha precursor 
SIRPA                 0.110   signal-regulatory protein alpha precursor 
SIRPB1                0.107   signal-regulatory protein beta 1 isoform 3 precurso...
SIRPB1                0.103   signal-regulatory protein beta 1 isoform 1 precurso...
SIRPG                 0.100   signal-regulatory protein gamma isoform 3 precursor ...
SIRPG                 0.100   signal-regulatory protein gamma isoform 1 precursor ...
SIRPB1                0.099   signal-regulatory protein beta 1 isoform 2 precurso...
SIRPG                 0.099   signal-regulatory protein gamma isoform 2 precursor ...
LOC654056             0.097   PREDICTED: similar to signal-regulatory protein bet...
LOC654056             0.096   PREDICTED: similar to signal-regulatory protein bet...
SIRPD                 0.081   signal-regulatory protein delta 
LOC100289473          0.043   PREDICTED: hypothetical protein XP_002344218 
IGSF10                0.031   immunoglobulin superfamily, member 10 
DSCAML1               0.030   Down syndrome cell adhesion molecule like 1 
DCC                   0.028   deleted in colorectal carcinoma 
HMCN2                 0.025   PREDICTED: hemicentin 2 
HMCN2                 0.025   PREDICTED: hemicentin 2 
DSCAM                 0.025   Down syndrome cell adhesion molecule isoform CHD2-42...
BTN2A2                0.024   butyrophilin, subfamily 2, member A2 isoform a 
CHL1                  0.022   cell adhesion molecule with homology to L1CAM precur...
MDGA1                 0.022   MAM domain containing glycosylphosphatidylinositol a...
ADAMTSL3              0.022   ADAMTS-like 3 precursor 
NEO1                  0.022   neogenin homolog 1 
BOC                   0.022   brother of CDO 
HMCN2                 0.021   PREDICTED: hemicentin 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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