Guide to the Human Genome
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Name: GGT5 Sequence: fasta or formatted (554aa) NCBI GI: 153266907
Description:

gamma-glutamyltransferase 5 isoform c

Referenced in:

Arachidonate, Prostaglandins, and Leukotrienes

Other entries for this name:
alt prot [586aa] gamma-glutamyltransferase 5 isoform b
alt prot [587aa] gamma-glutamyltransferase 5 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         56           2
 C cysteine            1.4          8           1
 D aspartate           3.2         18           1
 E glutamate           4.5         25           1
 F phenylalanine       3.1         17           2
 G glycine            10.6         59           3
 H histidine           2.5         14           2
 I isoleucine          4.5         25           2
 K lysine              2.0         11           1
 L leucine            11.2         62           2
 M methionine          1.3          7           1
 N asparagine          2.9         16           2
 P proline             6.7         37           4
 Q glutamine           5.8         32           3
 R arginine            6.0         33           2
 S serine              7.2         40           2
 T threonine           5.1         28           2
 V valine              8.5         47           2
 W tryptophan          1.3          7           1
 Y tyrosine            2.2         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-glutamyltransferase 5 isoform c 
GGT5                  0.985   gamma-glutamyltransferase 5 isoform b 
GGT5                  0.981   gamma-glutamyltransferase 5 isoform a 
GGT1                  0.299   gamma-glutamyltransferase 1 precursor 
GGT1                  0.299   gamma-glutamyltransferase 1 precursor 
GGT1                  0.299   gamma-glutamyltransferase 1 precursor 
GGT1                  0.299   gamma-glutamyltransferase 1 precursor 
GGT2                  0.279   PREDICTED: gamma-glutamyltransferase 2 isoform 3 [H...
GGT2                  0.279   PREDICTED: gamma-glutamyltransferase 2 isoform 1 [H...
GGT7                  0.150   gamma-glutamyltransferase 7 
GGTLC1                0.099   gamma-glutamyltransferase light chain 1 
GGTLC1                0.099   gamma-glutamyltransferase light chain 1 
GGTLC2                0.073   gamma-glutamyltransferase-like 4 isoform 1 
GGT6                  0.031   gamma-glutamyltransferase 6 isoform a 
LOC728438             0.027   PREDICTED: hypothetical protein 
LOC728253             0.027   PREDICTED: hypothetical protein 
LOC728216             0.027   PREDICTED: hypothetical protein 
LOC727996             0.027   PREDICTED: hypothetical protein 
LOC100293142          0.026   PREDICTED: similar to hCG2040019 
GGT6                  0.010   gamma-glutamyltransferase 6 isoform b 
LOC100292753          0.007   PREDICTED: hypothetical protein 
LOC100290856          0.007   PREDICTED: hypothetical protein XP_002347537 
LOC100289061          0.007   PREDICTED: hypothetical protein XP_002342174 
KIAA0196              0.006   strumpellin 
PPM1F                 0.006   protein phosphatase 1F 
LONRF2                0.006   LON peptidase N-terminal domain and ring finger 2 [...
LOC100287171          0.005   PREDICTED: hypothetical protein XP_002342940 isofor...
LOC100287171          0.005   PREDICTED: hypothetical protein XP_002342939 isofor...
DIDO1                 0.005   death inducer-obliterator 1 isoform c 
WASH1                 0.005   WAS protein family homolog 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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