Guide to the Human Genome
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Name: GGT5 Sequence: fasta or formatted (587aa) NCBI GI: 153266901
Description:

gamma-glutamyltransferase 5 isoform a

Referenced in:

Arachidonate, Prostaglandins, and Leukotrienes

Other entries for this name:
alt prot [586aa] gamma-glutamyltransferase 5 isoform b
alt prot [554aa] gamma-glutamyltransferase 5 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         62           2
 C cysteine            1.5          9           1
 D aspartate           3.2         19           1
 E glutamate           4.6         27           1
 F phenylalanine       2.9         17           2
 G glycine            10.4         61           3
 H histidine           2.6         15           2
 I isoleucine          4.4         26           2
 K lysine              2.0         12           1
 L leucine            11.2         66           2
 M methionine          1.2          7           1
 N asparagine          2.9         17           2
 P proline             6.8         40           4
 Q glutamine           5.8         34           3
 R arginine            5.8         34           2
 S serine              7.2         42           2
 T threonine           5.1         30           2
 V valine              8.5         50           2
 W tryptophan          1.2          7           1
 Y tyrosine            2.0         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-glutamyltransferase 5 isoform a 
GGT5                  0.995   gamma-glutamyltransferase 5 isoform b 
GGT5                  0.926   gamma-glutamyltransferase 5 isoform c 
GGT1                  0.305   gamma-glutamyltransferase 1 precursor 
GGT1                  0.305   gamma-glutamyltransferase 1 precursor 
GGT1                  0.305   gamma-glutamyltransferase 1 precursor 
GGT1                  0.305   gamma-glutamyltransferase 1 precursor 
GGT2                  0.288   PREDICTED: gamma-glutamyltransferase 2 isoform 3 [H...
GGT2                  0.284   PREDICTED: gamma-glutamyltransferase 2 isoform 1 [H...
GGT7                  0.155   gamma-glutamyltransferase 7 
GGTLC1                0.092   gamma-glutamyltransferase light chain 1 
GGTLC1                0.092   gamma-glutamyltransferase light chain 1 
GGTLC2                0.068   gamma-glutamyltransferase-like 4 isoform 1 
GGT6                  0.028   gamma-glutamyltransferase 6 isoform a 
LOC728438             0.025   PREDICTED: hypothetical protein 
LOC728253             0.025   PREDICTED: hypothetical protein 
LOC728216             0.025   PREDICTED: hypothetical protein 
LOC727996             0.025   PREDICTED: hypothetical protein 
LOC100293142          0.024   PREDICTED: similar to hCG2040019 
GGT6                  0.010   gamma-glutamyltransferase 6 isoform b 
KIAA0196              0.006   strumpellin 
PPM1F                 0.006   protein phosphatase 1F 
HCN4                  0.005   hyperpolarization activated cyclic nucleotide-gated p...
GLI1                  0.004   GLI family zinc finger 1 isoform 2 
GLI1                  0.004   GLI family zinc finger 1 isoform 1 
LOC100287171          0.004   PREDICTED: hypothetical protein XP_002342940 isofor...
LOC100287171          0.004   PREDICTED: hypothetical protein XP_002342939 isofor...
POLR2A                0.004   DNA-directed RNA polymerase II A 
WASH1                 0.004   WAS protein family homolog 1 
FOLH1                 0.004   folate hydrolase 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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