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Search of human proteins with 171542821
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1
[Homo sapiens]
(352 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1 ... 709 0.0
gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens] 62 6e-10
gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens] 62 6e-10
gi|53729363 leucine rich repeat and sterile alpha motif containi... 61 2e-09
gi|53729361 leucine rich repeat and sterile alpha motif containi... 61 2e-09
gi|53729359 leucine rich repeat and sterile alpha motif containi... 61 2e-09
gi|62865649 rififylin [Homo sapiens] 55 9e-08
gi|17432433 rififylin [Homo sapiens] 55 9e-08
gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens] 51 1e-06
gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens] 51 1e-06
gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens] 51 1e-06
gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens] 51 1e-06
gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa... 49 9e-06
gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap... 49 9e-06
gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap... 46 4e-05
gi|30348954 mindbomb homolog 1 [Homo sapiens] 45 1e-04
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 45 1e-04
gi|58743365 ring finger protein 157 [Homo sapiens] 45 1e-04
gi|217416388 neuralized homolog 1B [Homo sapiens] 44 2e-04
gi|14042925 ring finger protein 26 [Homo sapiens] 44 2e-04
gi|5729765 cell growth regulator with ring finger domain 1 [Homo... 43 5e-04
gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo sa... 41 0.001
gi|223278368 neuralized-like [Homo sapiens] 41 0.002
gi|44680139 baculoviral IAP repeat-containing 8 [Homo sapiens] 40 0.002
gi|5902054 ring finger protein 5 [Homo sapiens] 40 0.003
gi|47716512 mex-3 homolog B [Homo sapiens] 40 0.003
gi|38788243 myosin regulatory light chain interacting protein [H... 40 0.004
gi|11545910 livin inhibitor of apoptosis isoform beta [Homo sapi... 39 0.007
gi|21536421 livin inhibitor of apoptosis isoform alpha [Homo sap... 39 0.007
gi|237858654 ring finger protein 170 isoform a [Homo sapiens] 39 0.009
>gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1
[Homo sapiens]
Length = 352
Score = 709 bits (1831), Expect = 0.0
Identities = 352/352 (100%), Positives = 352/352 (100%)
Query: 1 MESGGRPSLCQFILLGTTSVVTAALYSVYRQKARVSQELKGAKKVHLGEDLKSILSEAPG 60
MESGGRPSLCQFILLGTTSVVTAALYSVYRQKARVSQELKGAKKVHLGEDLKSILSEAPG
Sbjct: 1 MESGGRPSLCQFILLGTTSVVTAALYSVYRQKARVSQELKGAKKVHLGEDLKSILSEAPG 60
Query: 61 KCVPYAVIEGAVRSVKETLNSQFVENCKGVIQRLTLQEHKMVWNRTTHLWNDCSKIIHQR 120
KCVPYAVIEGAVRSVKETLNSQFVENCKGVIQRLTLQEHKMVWNRTTHLWNDCSKIIHQR
Sbjct: 61 KCVPYAVIEGAVRSVKETLNSQFVENCKGVIQRLTLQEHKMVWNRTTHLWNDCSKIIHQR 120
Query: 121 TNTVPFDLVPHEDGVDVAVRVLKPLDSVDLGLETVYEKFHPSIQSFTDVIGHYISGERPK 180
TNTVPFDLVPHEDGVDVAVRVLKPLDSVDLGLETVYEKFHPSIQSFTDVIGHYISGERPK
Sbjct: 121 TNTVPFDLVPHEDGVDVAVRVLKPLDSVDLGLETVYEKFHPSIQSFTDVIGHYISGERPK 180
Query: 181 GIQETEEMLKVGATLTGVGELVLDNNSVRLQPPKQGMQYYLSSQDFDSLLQRQESSVRLW 240
GIQETEEMLKVGATLTGVGELVLDNNSVRLQPPKQGMQYYLSSQDFDSLLQRQESSVRLW
Sbjct: 181 GIQETEEMLKVGATLTGVGELVLDNNSVRLQPPKQGMQYYLSSQDFDSLLQRQESSVRLW 240
Query: 241 KVLALVFGFATCATLFFILRKQYLQRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKS 300
KVLALVFGFATCATLFFILRKQYLQRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKS
Sbjct: 241 KVLALVFGFATCATLFFILRKQYLQRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKS 300
Query: 301 ACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRVIPLYNS 352
ACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRVIPLYNS
Sbjct: 301 ACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRVIPLYNS 352
>gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens]
Length = 373
Score = 62.4 bits (150), Expect = 6e-10
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 16/133 (12%)
Query: 222 SSQDFDSLLQRQESSVR-LWKVLALVF-GFATCATLFFILRKQYLQRQERLRLKQMQEEF 279
S D SL + SVR L ++LA F ++ C + ++ K + ++ +E
Sbjct: 255 SLSDLSSLDDVEGMSVRQLKEILARNFVNYSGCCEKWELVEK----------VNRLYKEN 304
Query: 280 QEHEAQLLSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPIC 339
+E++ R + +D E S C +C+ + CV LECGH+ +CT+C + + E CPIC
Sbjct: 305 EENQKSYGERLQLQDEED-DSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSE---CPIC 360
Query: 340 RQAITRVIPLYNS 352
RQ + R + ++ S
Sbjct: 361 RQYVVRAVHVFKS 373
>gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens]
Length = 372
Score = 62.4 bits (150), Expect = 6e-10
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 16/133 (12%)
Query: 222 SSQDFDSLLQRQESSVR-LWKVLALVF-GFATCATLFFILRKQYLQRQERLRLKQMQEEF 279
S D SL + SVR L ++LA F ++ C + ++ K + ++ +E
Sbjct: 254 SLSDLSSLDDVEGMSVRQLKEILARNFVNYSGCCEKWELVEK----------VNRLYKEN 303
Query: 280 QEHEAQLLSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPIC 339
+E++ R + +D E S C +C+ + CV LECGH+ +CT+C + + E CPIC
Sbjct: 304 EENQKSYGERLQLQDEED-DSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSE---CPIC 359
Query: 340 RQAITRVIPLYNS 352
RQ + R + ++ S
Sbjct: 360 RQYVVRAVHVFKS 372
>gi|53729363 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 60.8 bits (146), Expect = 2e-09
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 280 QEHEAQLLSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPIC 339
QE + A P + E S CVVCL +FL CGHVC C +C + L + CP+C
Sbjct: 653 QEPPESVRPSAPPAELEVQASECVVCLEREAQMIFLNCGHVCCCQQCCQPL---RTCPLC 709
Query: 340 RQAITRVIPLYNS 352
RQ I + + +Y+S
Sbjct: 710 RQDIAQRLRIYHS 722
>gi|53729361 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 60.8 bits (146), Expect = 2e-09
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 280 QEHEAQLLSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPIC 339
QE + A P + E S CVVCL +FL CGHVC C +C + L + CP+C
Sbjct: 653 QEPPESVRPSAPPAELEVQASECVVCLEREAQMIFLNCGHVCCCQQCCQPL---RTCPLC 709
Query: 340 RQAITRVIPLYNS 352
RQ I + + +Y+S
Sbjct: 710 RQDIAQRLRIYHS 722
>gi|53729359 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 60.8 bits (146), Expect = 2e-09
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 280 QEHEAQLLSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPIC 339
QE + A P + E S CVVCL +FL CGHVC C +C + L + CP+C
Sbjct: 653 QEPPESVRPSAPPAELEVQASECVVCLEREAQMIFLNCGHVCCCQQCCQPL---RTCPLC 709
Query: 340 RQAITRVIPLYNS 352
RQ I + + +Y+S
Sbjct: 710 RQDIAQRLRIYHS 722
>gi|62865649 rififylin [Homo sapiens]
Length = 363
Score = 55.1 bits (131), Expect = 9e-08
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 299 KSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRVIPLYNS 352
++ C +C+ S CV LECGH+ +CT+C + + E CPICRQ + R + ++ S
Sbjct: 313 ENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNE---CPICRQYVIRAVHVFRS 363
>gi|17432433 rififylin [Homo sapiens]
Length = 363
Score = 55.1 bits (131), Expect = 9e-08
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 299 KSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRVIPLYNS 352
++ C +C+ S CV LECGH+ +CT+C + + E CPICRQ + R + ++ S
Sbjct: 313 ENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNE---CPICRQYVIRAVHVFRS 363
>gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens]
Length = 531
Score = 51.2 bits (121), Expect = 1e-06
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 261 KQYLQRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKSA--CVVCLSSFKSCVFLECG 318
K Q+Q R+ + +E E + KP D E+ ++ CVVCLS + + L C
Sbjct: 236 KPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCR 295
Query: 319 HVCSCTECYRALP-EPKKCPICR 340
H+C CT C L + CPICR
Sbjct: 296 HLCLCTSCADTLRYQANNCPICR 318
>gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens]
Length = 552
Score = 51.2 bits (121), Expect = 1e-06
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 261 KQYLQRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKSA--CVVCLSSFKSCVFLECG 318
K Q+Q R+ + +E E + KP D E+ ++ CVVCLS + + L C
Sbjct: 235 KPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCR 294
Query: 319 HVCSCTECYRALP-EPKKCPICR 340
H+C CT C L + CPICR
Sbjct: 295 HLCLCTSCADTLRYQANNCPICR 317
>gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens]
Length = 555
Score = 51.2 bits (121), Expect = 1e-06
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 261 KQYLQRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKSA--CVVCLSSFKSCVFLECG 318
K Q+Q R+ + +E E + KP D E+ ++ CVVCLS + + L C
Sbjct: 236 KPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCR 295
Query: 319 HVCSCTECYRALP-EPKKCPICR 340
H+C CT C L + CPICR
Sbjct: 296 HLCLCTSCADTLRYQANNCPICR 318
>gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens]
Length = 576
Score = 51.2 bits (121), Expect = 1e-06
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 261 KQYLQRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKSA--CVVCLSSFKSCVFLECG 318
K Q+Q R+ + +E E + KP D E+ ++ CVVCLS + + L C
Sbjct: 235 KPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCR 294
Query: 319 HVCSCTECYRALP-EPKKCPICR 340
H+C CT C L + CPICR
Sbjct: 295 HLCLCTSCADTLRYQANNCPICR 317
>gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo
sapiens]
Length = 604
Score = 48.5 bits (114), Expect = 9e-06
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 221 LSSQDFDSLLQRQESSVRLWKVLALVFGFATCATLFFILRKQYLQRQERLRLKQM--QEE 278
++ Q+ D + Q+ ++S++ +++ + A F + LQ E + + + Q++
Sbjct: 474 INEQEHDVIKQKTQTSLQARELIDTILVKGNIAATVF---RNSLQEAEAVLYEHLFVQQD 530
Query: 279 FQEHEAQLLSRAKPED---RESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKK 335
+ + +S E+ R + C VC+ S VF+ CGH+ C +C P +K
Sbjct: 531 IKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDC---APSLRK 587
Query: 336 CPICRQAITRVIPLYNS 352
CPICR I + + S
Sbjct: 588 CPICRSTIKGTVRTFLS 604
>gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo
sapiens]
Length = 604
Score = 48.5 bits (114), Expect = 9e-06
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 221 LSSQDFDSLLQRQESSVRLWKVLALVFGFATCATLFFILRKQYLQRQERLRLKQM--QEE 278
++ Q+ D + Q+ ++S++ +++ + A F + LQ E + + + Q++
Sbjct: 474 INEQEHDVIKQKTQTSLQARELIDTILVKGNIAATVF---RNSLQEAEAVLYEHLFVQQD 530
Query: 279 FQEHEAQLLSRAKPED---RESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKK 335
+ + +S E+ R + C VC+ S VF+ CGH+ C +C P +K
Sbjct: 531 IKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDC---APSLRK 587
Query: 336 CPICRQAITRVIPLYNS 352
CPICR I + + S
Sbjct: 588 CPICRSTIKGTVRTFLS 604
>gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo
sapiens]
Length = 618
Score = 46.2 bits (108), Expect = 4e-05
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 14/215 (6%)
Query: 149 DLGLETVYEKFHPSIQSF---TDVIGHYISGERPKGIQE----TEEMLKVGATLTGVGEL 201
DL +TV K + +++ D++ ++ E K +E EEM +L +
Sbjct: 407 DLVKQTVQSKILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRM 466
Query: 202 VLDNNSVRLQPPKQGM--QYYLSSQDFDSLLQRQESSVRLWKVL--ALVFGFATCATLFF 257
L + P + ++ Q+ D + Q+ + ++ +++ LV G A
Sbjct: 467 ALFQQLTCVLPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKN 526
Query: 258 ILRKQYLQRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKSACVVCLSSFKSCVFLEC 317
L++ + L + + + + LS + R + C VC+ S VF+ C
Sbjct: 527 CLKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPC 586
Query: 318 GHVCSCTECYRALPEPKKCPICRQAITRVIPLYNS 352
GH+ C EC P +KCPICR I + + S
Sbjct: 587 GHLVVCQEC---APSLRKCPICRGIIKGTVRTFLS 618
>gi|30348954 mindbomb homolog 1 [Homo sapiens]
Length = 1006
Score = 45.1 bits (105), Expect = 1e-04
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Query: 285 QLLSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAIT 344
Q+ SR K E+ CVVC + +F CGH+C+C C + KKC CR +
Sbjct: 856 QVQSRTKIEE-------CVVCSDKKAAVLFQPCGHMCACENCANLM---KKCVQCRAVVE 905
Query: 345 RVIP 348
R +P
Sbjct: 906 RRVP 909
Score = 41.2 bits (95), Expect = 0.001
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 299 KSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRVIPLY 350
++ C VCL K+ +FL CGH +C C + E CPICR+AI R I LY
Sbjct: 960 QTMCPVCLDRLKNMIFL-CGHG-TCQLCGDRMSE---CPICRKAIERRILLY 1006
Score = 39.7 bits (91), Expect = 0.004
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 294 DRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAI 343
D E+L+ C+VC + +F CGH+ +C+ C P KKC IC++ +
Sbjct: 812 DSETLEE-CMVCSDMKRDTLFGPCGHIATCSLC---SPRVKKCLICKEQV 857
>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
Length = 659
Score = 45.1 bits (105), Expect = 1e-04
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 288 SRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPK--KCPICRQAITR 345
S + PE R K CV+C + + CGH C EC + E + CP+C+ A+T+
Sbjct: 596 SSSPPESRR--KHDCVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQ 653
Query: 346 VIPLYN 351
I +++
Sbjct: 654 AIQIHS 659
>gi|58743365 ring finger protein 157 [Homo sapiens]
Length = 679
Score = 44.7 bits (104), Expect = 1e-04
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 293 EDRESLKSA-CVVCLSSFKSCVFLECGHVCSCTECYRALP-EPKKCPICR 340
ED S SA CVVCLS + + L C H+C C C L + CPICR
Sbjct: 267 EDEVSDNSAECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQANNCPICR 316
>gi|217416388 neuralized homolog 1B [Homo sapiens]
Length = 555
Score = 44.3 bits (103), Expect = 2e-04
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 292 PEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKK--CPICRQAITRVIPL 349
PE C VC V CGH+C C C L + CPICR+ I VI +
Sbjct: 493 PEPAGIKNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552
Query: 350 Y 350
Y
Sbjct: 553 Y 553
>gi|14042925 ring finger protein 26 [Homo sapiens]
Length = 433
Score = 43.9 bits (102), Expect = 2e-04
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 24/110 (21%)
Query: 265 QRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESL--------------------KSACVV 304
+RQ+ L + E +E EA+ + RE L + CV+
Sbjct: 323 RRQDTLPEAGRRSEAEEEEARTIRVTPVRGRERLNEEEPPGGQDPWKLLKEQEERKKCVI 382
Query: 305 CLSSFKSCVFLECGHVCSCTECYRALPE----PKKCPICRQAITRVIPLY 350
C K+ + L C H+C C C L + CP+CR+ I + + +Y
Sbjct: 383 CQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLNVY 432
>gi|5729765 cell growth regulator with ring finger domain 1 [Homo
sapiens]
Length = 332
Score = 42.7 bits (99), Expect = 5e-04
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 287 LSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAI 343
LS ++ E E CVVC + + V L C H C C C + ++CP+CRQ +
Sbjct: 259 LSESEVEPSEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYF---QQCPMCRQFV 312
>gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo
sapiens]
Length = 497
Score = 41.2 bits (95), Expect = 0.001
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 275 MQEEFQEHEAQL-LSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEP 333
MQ+E + Q +S + R + C +C+ + VF+ CGH+ +C +C A+
Sbjct: 422 MQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAV--- 478
Query: 334 KKCPICRQAIT 344
KCP+C IT
Sbjct: 479 DKCPMCYTVIT 489
>gi|223278368 neuralized-like [Homo sapiens]
Length = 574
Score = 40.8 bits (94), Expect = 0.002
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 302 CVVCLSSFKSCVFLECGHVCSCTECYRALPEPKK--CPICRQAITRVIPLYNS 352
C +C V CGH+C C C L + CPICR+ I +I Y S
Sbjct: 521 CTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHACCPICRRPIKDIIKTYRS 573
>gi|44680139 baculoviral IAP repeat-containing 8 [Homo sapiens]
Length = 236
Score = 40.4 bits (93), Expect = 0.002
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 287 LSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAI 343
+S +P R + C +C+ + VF+ CGH+ +C +C A+ +CP+C I
Sbjct: 174 ISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAV---DRCPMCSAVI 227
>gi|5902054 ring finger protein 5 [Homo sapiens]
Length = 180
Score = 40.0 bits (92), Expect = 0.003
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 302 CVVCLSSFKSCVFLECGHVCSCTECYR----ALPEPKKCPICRQAITR--VIPLY 350
C +CL + + V CGH+ C C PE ++CP+C+ I+R V+PLY
Sbjct: 27 CNICLETAREAVVSVCGHLY-CWPCLHQWLETRPERQECPVCKAGISREKVVPLY 80
>gi|47716512 mex-3 homolog B [Homo sapiens]
Length = 569
Score = 40.0 bits (92), Expect = 0.003
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 302 CVVCLSSFKSCVFLECGHVCSCTECYRALPEPK--KCPICRQAITRVIPLYN 351
C VC S + CGH C EC + E +CP+C A+T+ I +++
Sbjct: 518 CSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS 569
>gi|38788243 myosin regulatory light chain interacting protein [Homo
sapiens]
Length = 445
Score = 39.7 bits (91), Expect = 0.004
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 288 SRAKPEDRESLKSA--CVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITR 345
+R E LK A C+VC + F CGH C C L + CP+CR +
Sbjct: 371 TRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQL---QSCPVCRSRVEH 427
Query: 346 VIPLY 350
V +Y
Sbjct: 428 VQHVY 432
>gi|11545910 livin inhibitor of apoptosis isoform beta [Homo
sapiens]
Length = 280
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 11/61 (18%)
Query: 283 EAQLLSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQA 342
EAQL R E+R C VCL S VF+ CGH+ C EC P + CPICR
Sbjct: 222 EAQL--RRLQEER-----TCKVCLDRAVSIVFVPCGHLV-CAEC---APGLQLCPICRAP 270
Query: 343 I 343
+
Sbjct: 271 V 271
>gi|21536421 livin inhibitor of apoptosis isoform alpha [Homo
sapiens]
Length = 298
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 11/61 (18%)
Query: 283 EAQLLSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPEPKKCPICRQA 342
EAQL R E+R C VCL S VF+ CGH+ C EC P + CPICR
Sbjct: 240 EAQL--RRLQEER-----TCKVCLDRAVSIVFVPCGHLV-CAEC---APGLQLCPICRAP 288
Query: 343 I 343
+
Sbjct: 289 V 289
>gi|237858654 ring finger protein 170 isoform a [Homo sapiens]
Length = 258
Score = 38.5 bits (88), Expect = 0.009
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 225 DFDSLLQRQESSVRLWKVLALVFGFATCATLFFILRK---QYLQRQERLRLKQMQEEFQ- 280
D DS+++ V ++A+V FA ATL + L + Q + + + ++ ++E+ Q
Sbjct: 14 DDDSVIEGVSDQV----LVAVVVSFALIATLVYALFRNVHQNIHPENQELVRVLREQLQT 69
Query: 281 EHEAQLLSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCTEC------YRALPEPK 334
E +A +R + C +CL V CGH+ C C Y +
Sbjct: 70 EQDAPAATR----QQFYTDMYCPICLHQASFPVETNCGHLF-CGACIIAYWRYGSWLGAI 124
Query: 335 KCPICRQAITRVIPLY 350
CPICRQ +T ++ ++
Sbjct: 125 SCPICRQTVTLLLTVF 140
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,279,295
Number of Sequences: 37866
Number of extensions: 555121
Number of successful extensions: 2534
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 2419
Number of HSP's gapped (non-prelim): 202
length of query: 352
length of database: 18,247,518
effective HSP length: 103
effective length of query: 249
effective length of database: 14,347,320
effective search space: 3572482680
effective search space used: 3572482680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.