Guide to the Human Genome
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Name: RNF26 Sequence: fasta or formatted (433aa) NCBI GI: 14042925
Description:

ring finger protein 26

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         41           2
 C cysteine            3.9         17           2
 D aspartate           2.5         11           1
 E glutamate           4.8         21           4
 F phenylalanine       1.8          8           1
 G glycine             5.5         24           2
 H histidine           3.0         13           1
 I isoleucine          3.0         13           1
 K lysine              1.4          6           2
 L leucine            20.1         87           3
 M methionine          1.6          7           1
 N asparagine          2.8         12           1
 P proline             3.9         17           2
 Q glutamine           3.5         15           1
 R arginine            8.1         35           2
 S serine              6.9         30           3
 T threonine           4.8         21           1
 V valine              9.2         40           2
 W tryptophan          1.8          8           1
 Y tyrosine            1.6          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 26 
MGRN1                 0.036   mahogunin, ring finger 1 isoform 4 
MGRN1                 0.036   mahogunin, ring finger 1 isoform 3 
MGRN1                 0.036   mahogunin, ring finger 1 isoform 2 
MGRN1                 0.036   mahogunin, ring finger 1 isoform 1 
LRSAM1                0.035   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.035   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.035   leucine rich repeat and sterile alpha motif containi...
CGRRF1                0.035   cell growth regulator with ring finger domain 1 [Homo...
RNF157                0.032   ring finger protein 157 
BIRC2                 0.030   baculoviral IAP repeat-containing protein 2 
BIRC3                 0.029   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.029   baculoviral IAP repeat-containing protein 3 
BIRC7                 0.029   livin inhibitor of apoptosis isoform alpha 
NEURL                 0.024   neuralized-like 
BIRC8                 0.024   baculoviral IAP repeat-containing 8 
BIRC7                 0.023   livin inhibitor of apoptosis isoform beta 
MUL1                  0.023   mitochondrial ubiquitin ligase activator of NFKB 1 ...
NEURL1B               0.023   neuralized homolog 1B 
XIAP                  0.022   baculoviral IAP repeat-containing protein 4 
MIB1                  0.020   mindbomb homolog 1 
UNK                   0.020   zinc finger CCCH-type domain containing 5 
RNF141                0.020   ring finger protein 141 
RNF34                 0.018   ring finger protein 34 isoform 1 
RNF34                 0.018   ring finger protein 34 isoform 2 
RFFL                  0.017   rififylin 
RFFL                  0.017   rififylin 
MYLIP                 0.017   myosin regulatory light chain interacting protein [H...
MEX3C                 0.016   ring finger and KH domain containing 2 
HLTF                  0.014   helicase-like transcription factor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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