Guide to the Human Genome
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Name: CGRRF1 Sequence: fasta or formatted (332aa) NCBI GI: 5729765
Description:

cell growth regulator with ring finger domain 1

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         12           2
 C cysteine            4.8         16           1
 D aspartate           5.4         18           2
 E glutamate           7.2         24           2
 F phenylalanine       5.1         17           1
 G glycine             3.3         11           1
 H histidine           1.2          4           1
 I isoleucine          4.8         16           2
 K lysine              5.7         19           2
 L leucine            10.8         36           3
 M methionine          1.5          5           1
 N asparagine          3.6         12           3
 P proline             4.2         14           1
 Q glutamine           6.0         20           2
 R arginine            3.9         13           1
 S serine              8.1         27           3
 T threonine           6.9         23           2
 V valine              7.2         24           2
 W tryptophan          1.2          4           1
 Y tyrosine            5.1         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell growth regulator with ring finger domain 1 [Homo... 
RNF26                 0.044   ring finger protein 26 
MGRN1                 0.038   mahogunin, ring finger 1 isoform 4 
MGRN1                 0.038   mahogunin, ring finger 1 isoform 3 
MGRN1                 0.038   mahogunin, ring finger 1 isoform 2 
MGRN1                 0.038   mahogunin, ring finger 1 isoform 1 
RNF157                0.036   ring finger protein 157 
RNF34                 0.036   ring finger protein 34 isoform 1 
RNF34                 0.036   ring finger protein 34 isoform 2 
MYLIP                 0.035   myosin regulatory light chain interacting protein [H...
BIRC2                 0.033   baculoviral IAP repeat-containing protein 2 
RFFL                  0.030   rififylin 
RFFL                  0.030   rififylin 
LRSAM1                0.030   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.030   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.030   leucine rich repeat and sterile alpha motif containi...
MIB1                  0.029   mindbomb homolog 1 
BIRC8                 0.029   baculoviral IAP repeat-containing 8 
NEURL1B               0.027   neuralized homolog 1B 
XIAP                  0.027   baculoviral IAP repeat-containing protein 4 
MUL1                  0.027   mitochondrial ubiquitin ligase activator of NFKB 1 ...
BIRC3                 0.026   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.026   baculoviral IAP repeat-containing protein 3 
NEURL                 0.024   neuralized-like 
MEX3D                 0.024   ring finger and KH domain containing 1 
UNKL                  0.023   unkempt homolog (Drosophila)-like isoform 1 
MEX3C                 0.023   ring finger and KH domain containing 2 
MEX3B                 0.023   mex-3 homolog B 
BIRC7                 0.018   livin inhibitor of apoptosis isoform alpha 
RNF146                0.017   ring finger protein 146 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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