Guide to the Human Genome
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Name: NOL10 Sequence: fasta or formatted (688aa) NCBI GI: 171460958
Description:

nucleolar protein 10

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         25           2
 C cysteine            1.5         10           1
 D aspartate           6.1         42           2
 E glutamate           9.6         66           5
 F phenylalanine       4.1         28           2
 G glycine             4.1         28           1
 H histidine           2.0         14           1
 I isoleucine          4.1         28           1
 K lysine             10.0         69           3
 L leucine            11.0         76           2
 M methionine          1.6         11           1
 N asparagine          3.8         26           2
 P proline             3.8         26           1
 Q glutamine           4.7         32           2
 R arginine            6.8         47           3
 S serine              7.6         52           2
 T threonine           5.2         36           3
 V valine              5.8         40           2
 W tryptophan          0.9          6           1
 Y tyrosine            3.8         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleolar protein 10 
TCHH                  0.031   trichohyalin 
LOC400352             0.030   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.030   PREDICTED: similar to Putative golgin subfamily A m...
LOC283685             0.027   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC645202             0.027   PREDICTED: hypothetical protein LOC645202 
LOC727832             0.027   golgi autoantigen, golgin subfamily a-like 
LOC283685             0.027   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283767             0.027   golgi autoantigen, golgin subfamily a-like 
GIGYF2                0.027   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.027   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.027   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.027   GRB10 interacting GYF protein 2 isoform b 
MNS1                  0.026   meiosis-specific nuclear structural 1 
WDR87                 0.025   NYD-SP11 protein 
LRRIQ1                0.025   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.025   leucine-rich repeats and IQ motif containing 1 isof...
LOC440243             0.024   PREDICTED: Putative golgin subfamily A member 6-lik...
INCENP                0.024   inner centromere protein antigens 135/155kDa isofor...
CALD1                 0.024   caldesmon 1 isoform 1 
INCENP                0.024   inner centromere protein antigens 135/155kDa isofor...
CCDC19                0.023   nasopharyngeal epithelium specific protein 1 
LOC100133758          0.022   PREDICTED: hypothetical protein, partial 
CEP164                0.022   centrosomal protein 164kDa 
LOC651807             0.022   PREDICTED: hypothetical protein 
SFRS12                0.022   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.022   splicing factor, arginine/serine-rich 12 isoform b [...
CCDC11                0.021   coiled-coil domain containing 11 
DNAJC2                0.021   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ...
LOC100133220          0.021   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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