RPL23A 9501

Name: RPL23A	Sequence: fasta or formatted (156aa)		NCBI GI: 17105394
Description: ribosomal protein L23a		Referenced in: Ribosomes Small RNAs in RNA Processing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.8 20 1 C cysteine 0.0 0 0 D aspartate 5.8 9 1 E glutamate 3.2 5 1 F phenylalanine 1.9 3 1 G glycine 1.9 3 1 H histidine 2.6 4 1 I isoleucine 7.1 11 2 K lysine 19.2 30 4 L leucine 7.1 11 1 M methionine 1.3 2 1 N asparagine 3.8 6 2 P proline 7.7 12 2 Q glutamine 1.9 3 1 R arginine 7.1 11 2 S serine 2.6 4 1 T threonine 4.5 7 2 V valine 6.4 10 1 W tryptophan 0.0 0 0 Y tyrosine 3.2 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ribosomal protein L23a LOC731985 0.387 PREDICTED: similar to ribosomal protein L23a LOC100293728 0.327 PREDICTED: similar to hCG1776279 LOC100288802 0.327 PREDICTED: similar to hCG1776279 LOC100288802 0.327 PREDICTED: hypothetical protein XP_002342458 LOC100290257 0.208 PREDICTED: hypothetical protein XP_002346971 LOC100287434 0.208 PREDICTED: hypothetical protein XP_002342821 HIST1H1B 0.025 histone cluster 1, H1b MAP1B 0.021 microtubule-associated protein 1B POLRMT 0.021 mitochondrial DNA-directed RNA polymerase precursor... H1F0 0.021 H1 histone family, member 0 KIAA0922 0.021 hypothetical protein LOC23240 isoform 2 KIAA0922 0.021 hypothetical protein LOC23240 isoform 1 HIST1H1T 0.021 histone cluster 1, H1t L3MBTL2 0.018 l(3)mbt-like 2 PHRF1 0.018 PHD and ring finger domains 1 DOCK6 0.018 dedicator of cytokinesis 6 GDE1 0.014 glycerophosphodiester phosphodiesterase 1 MAP7D3 0.014 MAP7 domain containing 3 MAP1A 0.011 microtubule-associated protein 1A HIST1H1A 0.011 histone cluster 1, H1a BSN 0.011 bassoon protein NEFH 0.011 neurofilament, heavy polypeptide 200kDa TCEA3 0.011 transcription elongation factor A (SII), 3 SRRM2 0.011 splicing coactivator subunit SRm300 HMGXB4 0.011 high-mobility group protein 2-like 1 ANO10 0.011 transmembrane protein 16K ZFP91 0.011 zinc finger protein 91 LBR 0.007 lamin B receptor LBR 0.007 lamin B receptor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.