LBR 26650

Name: LBR	Sequence: fasta or formatted (615aa)		NCBI GI: 37595750
Description: lamin B receptor		Referenced in: Cholesterol Biosynthesis Nucleus and Nucleolus
Other entries for this name: alt mRNA [615aa] lamin B receptor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 35 2 C cysteine 1.1 7 1 D aspartate 3.4 21 1 E glutamate 5.7 35 2 F phenylalanine 6.3 39 2 G glycine 6.0 37 2 H histidine 2.3 14 1 I isoleucine 5.5 34 2 K lysine 5.7 35 3 L leucine 12.0 74 4 M methionine 2.0 12 1 N asparagine 3.3 20 1 P proline 6.0 37 3 Q glutamine 2.4 15 1 R arginine 6.7 41 3 S serine 8.0 49 3 T threonine 3.6 22 2 V valine 7.2 44 2 W tryptophan 1.8 11 2 Y tyrosine 5.4 33 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lamin B receptor LBR 1.000 lamin B receptor TM7SF2 0.385 transmembrane 7 superfamily member 2 DHCR7 0.194 7-dehydrocholesterol reductase SCAF1 0.015 SR-related CTD-associated factor 1 PRPF38B 0.012 PRP38 pre-mRNA processing factor 38 (yeast) domain ... KDM4A 0.011 jumonji domain containing 2A SFRS4 0.011 splicing factor, arginine/serine-rich 4 NACAD 0.011 NAC alpha domain containing NACAD 0.011 PREDICTED: NAC alpha domain containing NACAD 0.011 PREDICTED: NAC alpha domain containing NACAD 0.011 PREDICTED: NAC alpha domain containing NACAD 0.011 PREDICTED: NAC alpha domain containing SFRS6 0.011 arginine/serine-rich splicing factor 6 SFRS2 0.010 splicing factor, arginine/serine-rich 2 RBM16 0.010 RNA-binding motif protein 16 KDM4C 0.010 jumonji domain containing 2C isoform 2 KDM4C 0.010 jumonji domain containing 2C isoform 1 KDM4B 0.010 jumonji domain containing 2B SFRS7 0.010 splicing factor, arginine/serine-rich 7 CCNL2 0.009 cyclin L2 isoform A ARGLU1 0.009 arginine and glutamate rich 1 SFRS11 0.008 splicing factor, arginine/serine-rich 11 ZRANB2 0.008 zinc finger protein 265 isoform 2 CHERP 0.008 calcium homeostasis endoplasmic reticulum protein [... SRRM2 0.008 splicing coactivator subunit SRm300 LOC100170229 0.007 hypothetical protein LOC100170229 SRRM1 0.007 serine/arginine repetitive matrix 1 FLG 0.007 filaggrin LOC731605 0.007 PREDICTED: similar to BCL2-associated transcription... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.