POLRMT 753

Name: POLRMT	Sequence: fasta or formatted (1230aa)		NCBI GI: 110618253
Description: mitochondrial DNA-directed RNA polymerase precursor		Referenced in: Mitochondria RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 103 3 C cysteine 2.5 31 2 D aspartate 3.8 47 2 E glutamate 6.3 78 2 F phenylalanine 3.0 37 2 G glycine 5.7 70 3 H histidine 3.3 41 2 I isoleucine 1.5 18 1 K lysine 5.1 63 2 L leucine 13.0 160 2 M methionine 2.4 30 2 N asparagine 1.5 19 1 P proline 6.8 84 3 Q glutamine 7.4 91 3 R arginine 7.6 94 2 S serine 5.9 72 3 T threonine 4.1 50 2 V valine 7.9 97 3 W tryptophan 1.5 19 2 Y tyrosine 2.1 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mitochondrial DNA-directed RNA polymerase precursor... FAM186A 0.006 family with sequence similarity 186, member A [Homo... ZNF853 0.006 zinc finger protein 853 TTC9B 0.005 tetratricopeptide repeat domain 9B COL27A1 0.004 collagen, type XXVII, alpha 1 CDC42BPG 0.004 CDC42 binding protein kinase gamma (DMPK-like) [Hom... TP53INP2 0.004 tumor protein p53 inducible nuclear protein 2 TJP3 0.004 tight junction protein 3 FAM184B 0.004 hypothetical protein LOC27146 AGGF1 0.004 angiogenic factor VG5Q MAML3 0.004 mastermind-like 3 WIZ 0.003 widely-interspaced zinc finger motifs EMID2 0.003 EMI domain containing 2 KRBA1 0.003 KRAB A domain containing 1 SEC16A 0.003 SEC16 homolog A HOXB2 0.003 homeobox B2 SMARCA2 0.003 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.003 SWI/SNF-related matrix-associated actin-dependent re... CAST 0.003 calpastatin isoform l CAST 0.003 calpastatin isoform k CAST 0.003 calpastatin isoform j CAST 0.003 calpastatin isoform i CAST 0.003 calpastatin isoform h CAST 0.003 calpastatin isoform g CAST 0.003 calpastatin isoform f CAST 0.003 calpastatin isoform e CAST 0.003 calpastatin isoform b CAST 0.003 calpastatin isoform a METT10D 0.003 methyltransferase 10 domain containing MDN1 0.003 MDN1, midasin homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.