Guide to the Human Genome
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Name: BSND Sequence: fasta or formatted (320aa) NCBI GI: 17017967
Description:

barttin

Referenced in:

Chloride Channels
Auditory and Vestibular Functions
Kidney

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         23           2
 C cysteine            1.9          6           1
 D aspartate           7.8         25           2
 E glutamate           9.7         31           3
 F phenylalanine       3.8         12           1
 G glycine             9.7         31           2
 H histidine           1.6          5           1
 I isoleucine          3.4         11           2
 K lysine              3.4         11           1
 L leucine             8.8         28           2
 M methionine          3.8         12           1
 N asparagine          1.2          4           2
 P proline             9.4         30           2
 Q glutamine           6.2         20           2
 R arginine            3.4         11           2
 S serine              7.5         24           2
 T threonine           3.1         10           1
 V valine              3.4         11           2
 W tryptophan          1.9          6           1
 Y tyrosine            2.8          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   barttin 
SIDT2                 0.016   SID1 transmembrane family, member 2 
NACAD                 0.014   NAC alpha domain containing 
NACAD                 0.014   PREDICTED: NAC alpha domain containing 
NACAD                 0.014   PREDICTED: NAC alpha domain containing 
NACAD                 0.014   PREDICTED: NAC alpha domain containing 
NACAD                 0.014   PREDICTED: NAC alpha domain containing 
LOC100128071          0.012   PREDICTED: hypothetical protein LOC100128071 
LOC100128071          0.012   PREDICTED: hypothetical protein LOC100128071 
LOC100128071          0.012   PREDICTED: hypothetical protein LOC100128071 
PTCHD3                0.012   patched domain containing 3 
ZAR1                  0.012   zygote arrest 1 
TMEM132E              0.012   transmembrane protein 132E 
ZBTB32                0.011   zinc finger and BTB domain containing 32 
C7orf51               0.011   hypothetical protein FLJ37538 
PELP1                 0.011   proline, glutamic acid and leucine rich protein 1 [...
GAP43                 0.011   growth associated protein 43 isoform 1 
GAP43                 0.011   growth associated protein 43 isoform 2 
MAPK8IP2              0.011   mitogen-activated protein kinase 8 interacting protei...
FCHO1                 0.009   FCH domain only 1 isoform c 
FCHO1                 0.009   FCH domain only 1 isoform b 
FCHO1                 0.009   FCH domain only 1 isoform b 
FCHO1                 0.009   FCH domain only 1 isoform a 
CHD3                  0.009   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.009   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.009   chromodomain helicase DNA binding protein 3 isoform...
ZNF497                0.009   zinc finger protein 497 
DCAF8L2               0.009   DDB1 and CUL4 associated factor 8-like 2 
SETD1A                0.009   SET domain containing 1A 
CCDC37                0.009   coiled-coil domain containing 37 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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