Guide to the Human Genome
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Name: SIDT2 Sequence: fasta or formatted (832aa) NCBI GI: 94721340
Description:

SID1 transmembrane family, member 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         48           2
 C cysteine            2.5         21           1
 D aspartate           5.4         45           3
 E glutamate           3.6         30           2
 F phenylalanine       6.7         56           4
 G glycine             5.6         47           2
 H histidine           1.7         14           1
 I isoleucine          5.8         48           2
 K lysine              4.1         34           3
 L leucine            11.7         97           3
 M methionine          2.3         19           2
 N asparagine          4.6         38           2
 P proline             3.6         30           2
 Q glutamine           4.1         34           1
 R arginine            4.6         38           2
 S serine              6.9         57           2
 T threonine           5.3         44           2
 V valine              9.4         78           5
 W tryptophan          1.1          9           1
 Y tyrosine            5.4         45           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SID1 transmembrane family, member 2 
SIDT1                 0.557   SID1 transmembrane family, member 1 
BSND                  0.006   barttin 
SLC24A6               0.005   solute carrier family 24 member 6 
MMP10                 0.004   matrix metalloproteinase 10 preproprotein 
AGFG1                 0.004   HIV-1 Rev binding protein isoform 4 
AGFG1                 0.004   HIV-1 Rev binding protein isoform 3 
AGFG1                 0.004   HIV-1 Rev binding protein isoform 1 
AGFG1                 0.004   HIV-1 Rev binding protein isoform 2 
POP4                  0.003   processing of precursor 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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