Guide to the Human Genome
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Name: CCDC37 Sequence: fasta or formatted (611aa) NCBI GI: 217272874
Description:

coiled-coil domain containing 37

Referenced in:

Coiled-Coil Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         33           2
 C cysteine            0.7          4           1
 D aspartate           4.6         28           1
 E glutamate          12.6         77           4
 F phenylalanine       2.9         18           3
 G glycine             3.3         20           2
 H histidine           2.6         16           1
 I isoleucine          3.8         23           2
 K lysine              9.8         60           3
 L leucine             9.7         59           2
 M methionine          2.8         17           3
 N asparagine          3.3         20           1
 P proline             3.4         21           2
 Q glutamine           7.7         47           3
 R arginine            6.9         42           2
 S serine              8.3         51           5
 T threonine           6.1         37           2
 V valine              3.6         22           1
 W tryptophan          0.8          5           1
 Y tyrosine            1.8         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil domain containing 37 
CCDC38                0.210   coiled-coil domain containing 38 
TCHH                  0.031   trichohyalin 
GOLGB1                0.030   golgi autoantigen, golgin subfamily b, macrogolgin ...
MYH8                  0.030   myosin, heavy chain 8, skeletal muscle, perinatal [...
PLEC1                 0.027   plectin 1 isoform 11 
PLEC1                 0.027   plectin 1 isoform 10 
PLEC1                 0.027   plectin 1 isoform 8 
PLEC1                 0.027   plectin 1 isoform 7 
PLEC1                 0.027   plectin 1 isoform 6 
PLEC1                 0.027   plectin 1 isoform 3 
PLEC1                 0.027   plectin 1 isoform 2 
PLEC1                 0.027   plectin 1 isoform 1 
MYH6                  0.027   myosin heavy chain 6 
MYH1                  0.027   myosin, heavy chain 1, skeletal muscle, adult [Homo...
CCDC18                0.027   sarcoma antigen NY-SAR-41 
MYH2                  0.027   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.027   myosin, heavy chain 2, skeletal muscle, adult [Homo...
LOC283685             0.026   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYH4                  0.025   myosin, heavy polypeptide 4, skeletal muscle 
LOC283685             0.025   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CCDC42                0.025   coiled-coil domain containing 42 isoform 1 
MYH7                  0.025   myosin, heavy chain 7, cardiac muscle, beta 
CALD1                 0.025   caldesmon 1 isoform 1 
MYH9                  0.024   myosin, heavy polypeptide 9, non-muscle 
CENPE                 0.024   centromere protein E 
CCDC42                0.024   coiled-coil domain containing 42 isoform 2 
FBF1                  0.024   Fas (TNFRSF6) binding factor 1 
MYH10                 0.023   myosin, heavy polypeptide 10, non-muscle 
CNTLN                 0.022   centlein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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