Search of human proteins with 169218238

Search of human proteins with 169218238

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169218238 PREDICTED: similar to ataxia telangiectasia and
Rad3 related protein, partial [Homo sapiens]
         (2105 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157266317 ataxia telangiectasia and Rad3 related protein [Hom...  4196   0.0  
gi|169218238 PREDICTED: similar to ataxia telangiectasia and Rad...  4196   0.0  
gi|169165926 PREDICTED: similar to ataxia telangiectasia and Rad...   187   9e-47
gi|20336199 ataxia telangiectasia mutated isoform 2 [Homo sapiens]    119   3e-26
gi|71902540 ataxia telangiectasia mutated isoform 1 [Homo sapiens]    119   3e-26
gi|169218268 PREDICTED: similar to Serine-protein kinase ATM, pa...   119   3e-26
gi|126032350 protein kinase, DNA-activated, catalytic polypeptid...    52   8e-06
gi|13654237 protein kinase, DNA-activated, catalytic polypeptide...    52   8e-06
gi|113430845 PREDICTED: similar to protein kinase, DNA-activated...    52   8e-06
gi|4826730 FK506 binding protein 12-rapamycin associated protein...    50   3e-05
gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens]            43   0.003
gi|21361794 TIP120 protein [Homo sapiens]                              36   0.35 
gi|153791158 keratin 75 [Homo sapiens]                                 35   1.0  
gi|4507947 tyrosyl-tRNA synthetase [Homo sapiens]                      33   2.3  
gi|89886470 hypothetical protein LOC84960 [Homo sapiens]               33   3.8  
gi|24415404 MDN1, midasin homolog [Homo sapiens]                       32   5.0  
gi|19913369 transducin beta-like 3 [Homo sapiens]                      32   5.0  
gi|118582255 ATP-binding cassette, sub-family C, member 8 [Homo ...    32   6.6  
gi|40217803 leucine rich repeat containing 8 family, member E [H...    32   6.6  
gi|110815798 ovochymase 1 [Homo sapiens]                               32   6.6  

>gi|157266317 ataxia telangiectasia and Rad3 related protein [Homo
            sapiens]
          Length = 2644

 Score = 4196 bits (10882), Expect = 0.0
 Identities = 2105/2105 (100%), Positives = 2105/2105 (100%)

Query: 1    KIKSLAISFLTELFQLGGLPAQPASTFFSSFLELLKHLVEMDTDQLKLYEEPLSKLIKTL 60
            KIKSLAISFLTELFQLGGLPAQPASTFFSSFLELLKHLVEMDTDQLKLYEEPLSKLIKTL
Sbjct: 243  KIKSLAISFLTELFQLGGLPAQPASTFFSSFLELLKHLVEMDTDQLKLYEEPLSKLIKTL 302

Query: 61   FPFEAEAYRNIEPVYLNMLLEKLCVMFEDGVLMRLKSDLLKAALCHLLQYFLKFVPAGYE 120
            FPFEAEAYRNIEPVYLNMLLEKLCVMFEDGVLMRLKSDLLKAALCHLLQYFLKFVPAGYE
Sbjct: 303  FPFEAEAYRNIEPVYLNMLLEKLCVMFEDGVLMRLKSDLLKAALCHLLQYFLKFVPAGYE 362

Query: 121  SALQVRKVYVRNICKALLDVLGIEVDAEYLLGPLYAALKMESMEIIEEIQCQTQQENLSS 180
            SALQVRKVYVRNICKALLDVLGIEVDAEYLLGPLYAALKMESMEIIEEIQCQTQQENLSS
Sbjct: 363  SALQVRKVYVRNICKALLDVLGIEVDAEYLLGPLYAALKMESMEIIEEIQCQTQQENLSS 422

Query: 181  NSDGISPKRRRLSSSLNPSKRAPKQTEEIKHVDMNQKSILWSALKQKAESLQISLEYSGL 240
            NSDGISPKRRRLSSSLNPSKRAPKQTEEIKHVDMNQKSILWSALKQKAESLQISLEYSGL
Sbjct: 423  NSDGISPKRRRLSSSLNPSKRAPKQTEEIKHVDMNQKSILWSALKQKAESLQISLEYSGL 482

Query: 241  KNPVIEMLEGIAVVLQLTALCTVHCSHQNMNCRTFKDCQHKSKKKPSVVITWMSLDFYTK 300
            KNPVIEMLEGIAVVLQLTALCTVHCSHQNMNCRTFKDCQHKSKKKPSVVITWMSLDFYTK
Sbjct: 483  KNPVIEMLEGIAVVLQLTALCTVHCSHQNMNCRTFKDCQHKSKKKPSVVITWMSLDFYTK 542

Query: 301  VLKSCRSLLESVQKLDLEATIDKVVKIYDALIYMQVNSSFEDHILEDLCGMLSLPWIYSH 360
            VLKSCRSLLESVQKLDLEATIDKVVKIYDALIYMQVNSSFEDHILEDLCGMLSLPWIYSH
Sbjct: 543  VLKSCRSLLESVQKLDLEATIDKVVKIYDALIYMQVNSSFEDHILEDLCGMLSLPWIYSH 602

Query: 361  SDDGCLKLTTFAANLLTLSCRISDSYSPQAQSRCVFLLTLFPRRIFLEWRTAVYNWALQS 420
            SDDGCLKLTTFAANLLTLSCRISDSYSPQAQSRCVFLLTLFPRRIFLEWRTAVYNWALQS
Sbjct: 603  SDDGCLKLTTFAANLLTLSCRISDSYSPQAQSRCVFLLTLFPRRIFLEWRTAVYNWALQS 662

Query: 421  SHEVIRASCVSGFFILLQQQNSCNRVPKILIDKVKDDSDIVKKEFASILGQLVCTLHGMF 480
            SHEVIRASCVSGFFILLQQQNSCNRVPKILIDKVKDDSDIVKKEFASILGQLVCTLHGMF
Sbjct: 663  SHEVIRASCVSGFFILLQQQNSCNRVPKILIDKVKDDSDIVKKEFASILGQLVCTLHGMF 722

Query: 481  YLTSSLTEPFSEHGHVDLFCRNLKATSQHECSSSQLKASVCKPFLFLLKKKIPSPVKLAF 540
            YLTSSLTEPFSEHGHVDLFCRNLKATSQHECSSSQLKASVCKPFLFLLKKKIPSPVKLAF
Sbjct: 723  YLTSSLTEPFSEHGHVDLFCRNLKATSQHECSSSQLKASVCKPFLFLLKKKIPSPVKLAF 782

Query: 541  IDNLHHLCKHLDFREDETDVKAVLGTLLNLMEDPDKDVRVAFSGNIKHILESLDSEDGFI 600
            IDNLHHLCKHLDFREDETDVKAVLGTLLNLMEDPDKDVRVAFSGNIKHILESLDSEDGFI
Sbjct: 783  IDNLHHLCKHLDFREDETDVKAVLGTLLNLMEDPDKDVRVAFSGNIKHILESLDSEDGFI 842

Query: 601  KELFVLRMKEAYTHAQISRNNELKDTLILTTGDIGRAAKGDLVPFALLHLLHCLLSKSAS 660
            KELFVLRMKEAYTHAQISRNNELKDTLILTTGDIGRAAKGDLVPFALLHLLHCLLSKSAS
Sbjct: 843  KELFVLRMKEAYTHAQISRNNELKDTLILTTGDIGRAAKGDLVPFALLHLLHCLLSKSAS 902

Query: 661  VSGAAYTEIRALVAAKSVKLQSFFSQYKKPICQFLVESLHSSQMTALPNTPCQNADVRKQ 720
            VSGAAYTEIRALVAAKSVKLQSFFSQYKKPICQFLVESLHSSQMTALPNTPCQNADVRKQ
Sbjct: 903  VSGAAYTEIRALVAAKSVKLQSFFSQYKKPICQFLVESLHSSQMTALPNTPCQNADVRKQ 962

Query: 721  DVAHQREMALNTLSEIANVFDFPDLNRFLTRTLQVLLPDLAAKASPAASALIRTLGKQLN 780
            DVAHQREMALNTLSEIANVFDFPDLNRFLTRTLQVLLPDLAAKASPAASALIRTLGKQLN
Sbjct: 963  DVAHQREMALNTLSEIANVFDFPDLNRFLTRTLQVLLPDLAAKASPAASALIRTLGKQLN 1022

Query: 781  VNRREILINNFKYIFSHLVCSCSKDELERALHYLKNETEIELGSLLRQDFQGLHNELLLR 840
            VNRREILINNFKYIFSHLVCSCSKDELERALHYLKNETEIELGSLLRQDFQGLHNELLLR
Sbjct: 1023 VNRREILINNFKYIFSHLVCSCSKDELERALHYLKNETEIELGSLLRQDFQGLHNELLLR 1082

Query: 841  IGEHYQQVFNGLSILASFASSDDPYQGPRDIISPELMADYLQPKLLGILAFFNMQLLSSS 900
            IGEHYQQVFNGLSILASFASSDDPYQGPRDIISPELMADYLQPKLLGILAFFNMQLLSSS
Sbjct: 1083 IGEHYQQVFNGLSILASFASSDDPYQGPRDIISPELMADYLQPKLLGILAFFNMQLLSSS 1142

Query: 901  VGIEDKKMALNSLMSLMKLMGPKHVSSVRVKMMTTLRTGLRFKDDFPELCCRAWDCFVRC 960
            VGIEDKKMALNSLMSLMKLMGPKHVSSVRVKMMTTLRTGLRFKDDFPELCCRAWDCFVRC
Sbjct: 1143 VGIEDKKMALNSLMSLMKLMGPKHVSSVRVKMMTTLRTGLRFKDDFPELCCRAWDCFVRC 1202

Query: 961  LDHACLGSLLSHVIVALLPLIHIQPKETAAIFHYLIIENRDAVQDFLHEIYFLPDHPELK 1020
            LDHACLGSLLSHVIVALLPLIHIQPKETAAIFHYLIIENRDAVQDFLHEIYFLPDHPELK
Sbjct: 1203 LDHACLGSLLSHVIVALLPLIHIQPKETAAIFHYLIIENRDAVQDFLHEIYFLPDHPELK 1262

Query: 1021 KIKAVLQEYRKETSESTDLQTTLQLSMKAIQHENVDVRIHALTSLKETLYKNQEKLIKYA 1080
            KIKAVLQEYRKETSESTDLQTTLQLSMKAIQHENVDVRIHALTSLKETLYKNQEKLIKYA
Sbjct: 1263 KIKAVLQEYRKETSESTDLQTTLQLSMKAIQHENVDVRIHALTSLKETLYKNQEKLIKYA 1322

Query: 1081 TDSETVEPIISQLVTVLLKGCQDANSQARLLCGECLGELGAIDPGRLDFSTTETQGKDFT 1140
            TDSETVEPIISQLVTVLLKGCQDANSQARLLCGECLGELGAIDPGRLDFSTTETQGKDFT
Sbjct: 1323 TDSETVEPIISQLVTVLLKGCQDANSQARLLCGECLGELGAIDPGRLDFSTTETQGKDFT 1382

Query: 1141 FVTGVEDSSFAYGLLMELTRAYLAYADNSRAQDSAAYAIQELLSIYDCREMETNGPGHQL 1200
            FVTGVEDSSFAYGLLMELTRAYLAYADNSRAQDSAAYAIQELLSIYDCREMETNGPGHQL
Sbjct: 1383 FVTGVEDSSFAYGLLMELTRAYLAYADNSRAQDSAAYAIQELLSIYDCREMETNGPGHQL 1442

Query: 1201 WRRFPEHVREILEPHLNTRYKSSQKSTDWSGVKKPIYLSKLGSNFAEWSASWAGYLITKV 1260
            WRRFPEHVREILEPHLNTRYKSSQKSTDWSGVKKPIYLSKLGSNFAEWSASWAGYLITKV
Sbjct: 1443 WRRFPEHVREILEPHLNTRYKSSQKSTDWSGVKKPIYLSKLGSNFAEWSASWAGYLITKV 1502

Query: 1261 RHDLASKIFTCCSIMMKHDFKVTIYLLPHILVYVLLGCNQEDQQEVYAEIMAVLKHDDQH 1320
            RHDLASKIFTCCSIMMKHDFKVTIYLLPHILVYVLLGCNQEDQQEVYAEIMAVLKHDDQH
Sbjct: 1503 RHDLASKIFTCCSIMMKHDFKVTIYLLPHILVYVLLGCNQEDQQEVYAEIMAVLKHDDQH 1562

Query: 1321 TINTQDIASDLCQLSTQTVFSMLDHLTQWARHKFQALKAEKCPHSKSNRNKVDSMVSTVD 1380
            TINTQDIASDLCQLSTQTVFSMLDHLTQWARHKFQALKAEKCPHSKSNRNKVDSMVSTVD
Sbjct: 1563 TINTQDIASDLCQLSTQTVFSMLDHLTQWARHKFQALKAEKCPHSKSNRNKVDSMVSTVD 1622

Query: 1381 YEDYQSVTRFLDLIPQDTLAVASFRSKAYTRAVMHFESFITEKKQNIQEHLGFLQKLYAA 1440
            YEDYQSVTRFLDLIPQDTLAVASFRSKAYTRAVMHFESFITEKKQNIQEHLGFLQKLYAA
Sbjct: 1623 YEDYQSVTRFLDLIPQDTLAVASFRSKAYTRAVMHFESFITEKKQNIQEHLGFLQKLYAA 1682

Query: 1441 MHEPDGVAGVSAIRKAEPSLKEQILEHESLGLLRDATACYDRAIQLEPDQIIHYHGVVKS 1500
            MHEPDGVAGVSAIRKAEPSLKEQILEHESLGLLRDATACYDRAIQLEPDQIIHYHGVVKS
Sbjct: 1683 MHEPDGVAGVSAIRKAEPSLKEQILEHESLGLLRDATACYDRAIQLEPDQIIHYHGVVKS 1742

Query: 1501 MLGLGQLSTVITQVNGVHANRSEWTDELNTYRVEAAWKLSQWDLVENYLAADGKSTTWSV 1560
            MLGLGQLSTVITQVNGVHANRSEWTDELNTYRVEAAWKLSQWDLVENYLAADGKSTTWSV
Sbjct: 1743 MLGLGQLSTVITQVNGVHANRSEWTDELNTYRVEAAWKLSQWDLVENYLAADGKSTTWSV 1802

Query: 1561 RLGQLLLSAKKRDITAFYDSLKLVRAEQIVPLSAASFERGSYQRGYEYIVRLHMLCELEH 1620
            RLGQLLLSAKKRDITAFYDSLKLVRAEQIVPLSAASFERGSYQRGYEYIVRLHMLCELEH
Sbjct: 1803 RLGQLLLSAKKRDITAFYDSLKLVRAEQIVPLSAASFERGSYQRGYEYIVRLHMLCELEH 1862

Query: 1621 SIKPLFQHSPGDSSQEDSLNWVARLEMTQNSYRAKEPILALRRALLSLNKRPDYNEMVGE 1680
            SIKPLFQHSPGDSSQEDSLNWVARLEMTQNSYRAKEPILALRRALLSLNKRPDYNEMVGE
Sbjct: 1863 SIKPLFQHSPGDSSQEDSLNWVARLEMTQNSYRAKEPILALRRALLSLNKRPDYNEMVGE 1922

Query: 1681 CWLQSARVARKAGHHQTAYNALLNAGESRLAELYVERAKWLWSKGDVHQALIVLQKGVEL 1740
            CWLQSARVARKAGHHQTAYNALLNAGESRLAELYVERAKWLWSKGDVHQALIVLQKGVEL
Sbjct: 1923 CWLQSARVARKAGHHQTAYNALLNAGESRLAELYVERAKWLWSKGDVHQALIVLQKGVEL 1982

Query: 1741 CFPENETPPEGKNMLIHGRAMLLVGRFMEETANFESNAIMKKYKDVTACLPEWEDGHFYL 1800
            CFPENETPPEGKNMLIHGRAMLLVGRFMEETANFESNAIMKKYKDVTACLPEWEDGHFYL
Sbjct: 1983 CFPENETPPEGKNMLIHGRAMLLVGRFMEETANFESNAIMKKYKDVTACLPEWEDGHFYL 2042

Query: 1801 AKYYDKLMPMVTDNKMEKQGDLIRYIVLHFGRSLQYGNQFIYQSMPRMLTLWLDYGTKAY 1860
            AKYYDKLMPMVTDNKMEKQGDLIRYIVLHFGRSLQYGNQFIYQSMPRMLTLWLDYGTKAY
Sbjct: 2043 AKYYDKLMPMVTDNKMEKQGDLIRYIVLHFGRSLQYGNQFIYQSMPRMLTLWLDYGTKAY 2102

Query: 1861 EWEKAGRSDRVQMRNDLGKINKVITEHTNYLAPYQFLTAFSQLISRICHSHDEVFVVLME 1920
            EWEKAGRSDRVQMRNDLGKINKVITEHTNYLAPYQFLTAFSQLISRICHSHDEVFVVLME
Sbjct: 2103 EWEKAGRSDRVQMRNDLGKINKVITEHTNYLAPYQFLTAFSQLISRICHSHDEVFVVLME 2162

Query: 1921 IIAKVFLAYPQQAMWMMTAVSKSSYPMRVNRCKEILNKAIHMKKSLEKFVGDATRLTDKL 1980
            IIAKVFLAYPQQAMWMMTAVSKSSYPMRVNRCKEILNKAIHMKKSLEKFVGDATRLTDKL
Sbjct: 2163 IIAKVFLAYPQQAMWMMTAVSKSSYPMRVNRCKEILNKAIHMKKSLEKFVGDATRLTDKL 2222

Query: 1981 LELCNKPVDGSSSTLSMSTHFKMLKKLVEEATFSEILIPLQSVMIPTLPSILGTHANHAS 2040
            LELCNKPVDGSSSTLSMSTHFKMLKKLVEEATFSEILIPLQSVMIPTLPSILGTHANHAS
Sbjct: 2223 LELCNKPVDGSSSTLSMSTHFKMLKKLVEEATFSEILIPLQSVMIPTLPSILGTHANHAS 2282

Query: 2041 HEPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFN 2100
            HEPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFN
Sbjct: 2283 HEPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFN 2342

Query: 2101 SLINK 2105
            SLINK
Sbjct: 2343 SLINK 2347


>gi|169218238 PREDICTED: similar to ataxia telangiectasia and Rad3
            related protein, partial [Homo sapiens]
          Length = 2105

 Score = 4196 bits (10882), Expect = 0.0
 Identities = 2105/2105 (100%), Positives = 2105/2105 (100%)

Query: 1    KIKSLAISFLTELFQLGGLPAQPASTFFSSFLELLKHLVEMDTDQLKLYEEPLSKLIKTL 60
            KIKSLAISFLTELFQLGGLPAQPASTFFSSFLELLKHLVEMDTDQLKLYEEPLSKLIKTL
Sbjct: 1    KIKSLAISFLTELFQLGGLPAQPASTFFSSFLELLKHLVEMDTDQLKLYEEPLSKLIKTL 60

Query: 61   FPFEAEAYRNIEPVYLNMLLEKLCVMFEDGVLMRLKSDLLKAALCHLLQYFLKFVPAGYE 120
            FPFEAEAYRNIEPVYLNMLLEKLCVMFEDGVLMRLKSDLLKAALCHLLQYFLKFVPAGYE
Sbjct: 61   FPFEAEAYRNIEPVYLNMLLEKLCVMFEDGVLMRLKSDLLKAALCHLLQYFLKFVPAGYE 120

Query: 121  SALQVRKVYVRNICKALLDVLGIEVDAEYLLGPLYAALKMESMEIIEEIQCQTQQENLSS 180
            SALQVRKVYVRNICKALLDVLGIEVDAEYLLGPLYAALKMESMEIIEEIQCQTQQENLSS
Sbjct: 121  SALQVRKVYVRNICKALLDVLGIEVDAEYLLGPLYAALKMESMEIIEEIQCQTQQENLSS 180

Query: 181  NSDGISPKRRRLSSSLNPSKRAPKQTEEIKHVDMNQKSILWSALKQKAESLQISLEYSGL 240
            NSDGISPKRRRLSSSLNPSKRAPKQTEEIKHVDMNQKSILWSALKQKAESLQISLEYSGL
Sbjct: 181  NSDGISPKRRRLSSSLNPSKRAPKQTEEIKHVDMNQKSILWSALKQKAESLQISLEYSGL 240

Query: 241  KNPVIEMLEGIAVVLQLTALCTVHCSHQNMNCRTFKDCQHKSKKKPSVVITWMSLDFYTK 300
            KNPVIEMLEGIAVVLQLTALCTVHCSHQNMNCRTFKDCQHKSKKKPSVVITWMSLDFYTK
Sbjct: 241  KNPVIEMLEGIAVVLQLTALCTVHCSHQNMNCRTFKDCQHKSKKKPSVVITWMSLDFYTK 300

Query: 301  VLKSCRSLLESVQKLDLEATIDKVVKIYDALIYMQVNSSFEDHILEDLCGMLSLPWIYSH 360
            VLKSCRSLLESVQKLDLEATIDKVVKIYDALIYMQVNSSFEDHILEDLCGMLSLPWIYSH
Sbjct: 301  VLKSCRSLLESVQKLDLEATIDKVVKIYDALIYMQVNSSFEDHILEDLCGMLSLPWIYSH 360

Query: 361  SDDGCLKLTTFAANLLTLSCRISDSYSPQAQSRCVFLLTLFPRRIFLEWRTAVYNWALQS 420
            SDDGCLKLTTFAANLLTLSCRISDSYSPQAQSRCVFLLTLFPRRIFLEWRTAVYNWALQS
Sbjct: 361  SDDGCLKLTTFAANLLTLSCRISDSYSPQAQSRCVFLLTLFPRRIFLEWRTAVYNWALQS 420

Query: 421  SHEVIRASCVSGFFILLQQQNSCNRVPKILIDKVKDDSDIVKKEFASILGQLVCTLHGMF 480
            SHEVIRASCVSGFFILLQQQNSCNRVPKILIDKVKDDSDIVKKEFASILGQLVCTLHGMF
Sbjct: 421  SHEVIRASCVSGFFILLQQQNSCNRVPKILIDKVKDDSDIVKKEFASILGQLVCTLHGMF 480

Query: 481  YLTSSLTEPFSEHGHVDLFCRNLKATSQHECSSSQLKASVCKPFLFLLKKKIPSPVKLAF 540
            YLTSSLTEPFSEHGHVDLFCRNLKATSQHECSSSQLKASVCKPFLFLLKKKIPSPVKLAF
Sbjct: 481  YLTSSLTEPFSEHGHVDLFCRNLKATSQHECSSSQLKASVCKPFLFLLKKKIPSPVKLAF 540

Query: 541  IDNLHHLCKHLDFREDETDVKAVLGTLLNLMEDPDKDVRVAFSGNIKHILESLDSEDGFI 600
            IDNLHHLCKHLDFREDETDVKAVLGTLLNLMEDPDKDVRVAFSGNIKHILESLDSEDGFI
Sbjct: 541  IDNLHHLCKHLDFREDETDVKAVLGTLLNLMEDPDKDVRVAFSGNIKHILESLDSEDGFI 600

Query: 601  KELFVLRMKEAYTHAQISRNNELKDTLILTTGDIGRAAKGDLVPFALLHLLHCLLSKSAS 660
            KELFVLRMKEAYTHAQISRNNELKDTLILTTGDIGRAAKGDLVPFALLHLLHCLLSKSAS
Sbjct: 601  KELFVLRMKEAYTHAQISRNNELKDTLILTTGDIGRAAKGDLVPFALLHLLHCLLSKSAS 660

Query: 661  VSGAAYTEIRALVAAKSVKLQSFFSQYKKPICQFLVESLHSSQMTALPNTPCQNADVRKQ 720
            VSGAAYTEIRALVAAKSVKLQSFFSQYKKPICQFLVESLHSSQMTALPNTPCQNADVRKQ
Sbjct: 661  VSGAAYTEIRALVAAKSVKLQSFFSQYKKPICQFLVESLHSSQMTALPNTPCQNADVRKQ 720

Query: 721  DVAHQREMALNTLSEIANVFDFPDLNRFLTRTLQVLLPDLAAKASPAASALIRTLGKQLN 780
            DVAHQREMALNTLSEIANVFDFPDLNRFLTRTLQVLLPDLAAKASPAASALIRTLGKQLN
Sbjct: 721  DVAHQREMALNTLSEIANVFDFPDLNRFLTRTLQVLLPDLAAKASPAASALIRTLGKQLN 780

Query: 781  VNRREILINNFKYIFSHLVCSCSKDELERALHYLKNETEIELGSLLRQDFQGLHNELLLR 840
            VNRREILINNFKYIFSHLVCSCSKDELERALHYLKNETEIELGSLLRQDFQGLHNELLLR
Sbjct: 781  VNRREILINNFKYIFSHLVCSCSKDELERALHYLKNETEIELGSLLRQDFQGLHNELLLR 840

Query: 841  IGEHYQQVFNGLSILASFASSDDPYQGPRDIISPELMADYLQPKLLGILAFFNMQLLSSS 900
            IGEHYQQVFNGLSILASFASSDDPYQGPRDIISPELMADYLQPKLLGILAFFNMQLLSSS
Sbjct: 841  IGEHYQQVFNGLSILASFASSDDPYQGPRDIISPELMADYLQPKLLGILAFFNMQLLSSS 900

Query: 901  VGIEDKKMALNSLMSLMKLMGPKHVSSVRVKMMTTLRTGLRFKDDFPELCCRAWDCFVRC 960
            VGIEDKKMALNSLMSLMKLMGPKHVSSVRVKMMTTLRTGLRFKDDFPELCCRAWDCFVRC
Sbjct: 901  VGIEDKKMALNSLMSLMKLMGPKHVSSVRVKMMTTLRTGLRFKDDFPELCCRAWDCFVRC 960

Query: 961  LDHACLGSLLSHVIVALLPLIHIQPKETAAIFHYLIIENRDAVQDFLHEIYFLPDHPELK 1020
            LDHACLGSLLSHVIVALLPLIHIQPKETAAIFHYLIIENRDAVQDFLHEIYFLPDHPELK
Sbjct: 961  LDHACLGSLLSHVIVALLPLIHIQPKETAAIFHYLIIENRDAVQDFLHEIYFLPDHPELK 1020

Query: 1021 KIKAVLQEYRKETSESTDLQTTLQLSMKAIQHENVDVRIHALTSLKETLYKNQEKLIKYA 1080
            KIKAVLQEYRKETSESTDLQTTLQLSMKAIQHENVDVRIHALTSLKETLYKNQEKLIKYA
Sbjct: 1021 KIKAVLQEYRKETSESTDLQTTLQLSMKAIQHENVDVRIHALTSLKETLYKNQEKLIKYA 1080

Query: 1081 TDSETVEPIISQLVTVLLKGCQDANSQARLLCGECLGELGAIDPGRLDFSTTETQGKDFT 1140
            TDSETVEPIISQLVTVLLKGCQDANSQARLLCGECLGELGAIDPGRLDFSTTETQGKDFT
Sbjct: 1081 TDSETVEPIISQLVTVLLKGCQDANSQARLLCGECLGELGAIDPGRLDFSTTETQGKDFT 1140

Query: 1141 FVTGVEDSSFAYGLLMELTRAYLAYADNSRAQDSAAYAIQELLSIYDCREMETNGPGHQL 1200
            FVTGVEDSSFAYGLLMELTRAYLAYADNSRAQDSAAYAIQELLSIYDCREMETNGPGHQL
Sbjct: 1141 FVTGVEDSSFAYGLLMELTRAYLAYADNSRAQDSAAYAIQELLSIYDCREMETNGPGHQL 1200

Query: 1201 WRRFPEHVREILEPHLNTRYKSSQKSTDWSGVKKPIYLSKLGSNFAEWSASWAGYLITKV 1260
            WRRFPEHVREILEPHLNTRYKSSQKSTDWSGVKKPIYLSKLGSNFAEWSASWAGYLITKV
Sbjct: 1201 WRRFPEHVREILEPHLNTRYKSSQKSTDWSGVKKPIYLSKLGSNFAEWSASWAGYLITKV 1260

Query: 1261 RHDLASKIFTCCSIMMKHDFKVTIYLLPHILVYVLLGCNQEDQQEVYAEIMAVLKHDDQH 1320
            RHDLASKIFTCCSIMMKHDFKVTIYLLPHILVYVLLGCNQEDQQEVYAEIMAVLKHDDQH
Sbjct: 1261 RHDLASKIFTCCSIMMKHDFKVTIYLLPHILVYVLLGCNQEDQQEVYAEIMAVLKHDDQH 1320

Query: 1321 TINTQDIASDLCQLSTQTVFSMLDHLTQWARHKFQALKAEKCPHSKSNRNKVDSMVSTVD 1380
            TINTQDIASDLCQLSTQTVFSMLDHLTQWARHKFQALKAEKCPHSKSNRNKVDSMVSTVD
Sbjct: 1321 TINTQDIASDLCQLSTQTVFSMLDHLTQWARHKFQALKAEKCPHSKSNRNKVDSMVSTVD 1380

Query: 1381 YEDYQSVTRFLDLIPQDTLAVASFRSKAYTRAVMHFESFITEKKQNIQEHLGFLQKLYAA 1440
            YEDYQSVTRFLDLIPQDTLAVASFRSKAYTRAVMHFESFITEKKQNIQEHLGFLQKLYAA
Sbjct: 1381 YEDYQSVTRFLDLIPQDTLAVASFRSKAYTRAVMHFESFITEKKQNIQEHLGFLQKLYAA 1440

Query: 1441 MHEPDGVAGVSAIRKAEPSLKEQILEHESLGLLRDATACYDRAIQLEPDQIIHYHGVVKS 1500
            MHEPDGVAGVSAIRKAEPSLKEQILEHESLGLLRDATACYDRAIQLEPDQIIHYHGVVKS
Sbjct: 1441 MHEPDGVAGVSAIRKAEPSLKEQILEHESLGLLRDATACYDRAIQLEPDQIIHYHGVVKS 1500

Query: 1501 MLGLGQLSTVITQVNGVHANRSEWTDELNTYRVEAAWKLSQWDLVENYLAADGKSTTWSV 1560
            MLGLGQLSTVITQVNGVHANRSEWTDELNTYRVEAAWKLSQWDLVENYLAADGKSTTWSV
Sbjct: 1501 MLGLGQLSTVITQVNGVHANRSEWTDELNTYRVEAAWKLSQWDLVENYLAADGKSTTWSV 1560

Query: 1561 RLGQLLLSAKKRDITAFYDSLKLVRAEQIVPLSAASFERGSYQRGYEYIVRLHMLCELEH 1620
            RLGQLLLSAKKRDITAFYDSLKLVRAEQIVPLSAASFERGSYQRGYEYIVRLHMLCELEH
Sbjct: 1561 RLGQLLLSAKKRDITAFYDSLKLVRAEQIVPLSAASFERGSYQRGYEYIVRLHMLCELEH 1620

Query: 1621 SIKPLFQHSPGDSSQEDSLNWVARLEMTQNSYRAKEPILALRRALLSLNKRPDYNEMVGE 1680
            SIKPLFQHSPGDSSQEDSLNWVARLEMTQNSYRAKEPILALRRALLSLNKRPDYNEMVGE
Sbjct: 1621 SIKPLFQHSPGDSSQEDSLNWVARLEMTQNSYRAKEPILALRRALLSLNKRPDYNEMVGE 1680

Query: 1681 CWLQSARVARKAGHHQTAYNALLNAGESRLAELYVERAKWLWSKGDVHQALIVLQKGVEL 1740
            CWLQSARVARKAGHHQTAYNALLNAGESRLAELYVERAKWLWSKGDVHQALIVLQKGVEL
Sbjct: 1681 CWLQSARVARKAGHHQTAYNALLNAGESRLAELYVERAKWLWSKGDVHQALIVLQKGVEL 1740

Query: 1741 CFPENETPPEGKNMLIHGRAMLLVGRFMEETANFESNAIMKKYKDVTACLPEWEDGHFYL 1800
            CFPENETPPEGKNMLIHGRAMLLVGRFMEETANFESNAIMKKYKDVTACLPEWEDGHFYL
Sbjct: 1741 CFPENETPPEGKNMLIHGRAMLLVGRFMEETANFESNAIMKKYKDVTACLPEWEDGHFYL 1800

Query: 1801 AKYYDKLMPMVTDNKMEKQGDLIRYIVLHFGRSLQYGNQFIYQSMPRMLTLWLDYGTKAY 1860
            AKYYDKLMPMVTDNKMEKQGDLIRYIVLHFGRSLQYGNQFIYQSMPRMLTLWLDYGTKAY
Sbjct: 1801 AKYYDKLMPMVTDNKMEKQGDLIRYIVLHFGRSLQYGNQFIYQSMPRMLTLWLDYGTKAY 1860

Query: 1861 EWEKAGRSDRVQMRNDLGKINKVITEHTNYLAPYQFLTAFSQLISRICHSHDEVFVVLME 1920
            EWEKAGRSDRVQMRNDLGKINKVITEHTNYLAPYQFLTAFSQLISRICHSHDEVFVVLME
Sbjct: 1861 EWEKAGRSDRVQMRNDLGKINKVITEHTNYLAPYQFLTAFSQLISRICHSHDEVFVVLME 1920

Query: 1921 IIAKVFLAYPQQAMWMMTAVSKSSYPMRVNRCKEILNKAIHMKKSLEKFVGDATRLTDKL 1980
            IIAKVFLAYPQQAMWMMTAVSKSSYPMRVNRCKEILNKAIHMKKSLEKFVGDATRLTDKL
Sbjct: 1921 IIAKVFLAYPQQAMWMMTAVSKSSYPMRVNRCKEILNKAIHMKKSLEKFVGDATRLTDKL 1980

Query: 1981 LELCNKPVDGSSSTLSMSTHFKMLKKLVEEATFSEILIPLQSVMIPTLPSILGTHANHAS 2040
            LELCNKPVDGSSSTLSMSTHFKMLKKLVEEATFSEILIPLQSVMIPTLPSILGTHANHAS
Sbjct: 1981 LELCNKPVDGSSSTLSMSTHFKMLKKLVEEATFSEILIPLQSVMIPTLPSILGTHANHAS 2040

Query: 2041 HEPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFN 2100
            HEPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFN
Sbjct: 2041 HEPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFN 2100

Query: 2101 SLINK 2105
            SLINK
Sbjct: 2101 SLINK 2105


>gi|169165926 PREDICTED: similar to ataxia telangiectasia and Rad3
            related protein, partial [Homo sapiens]
          Length = 386

 Score =  187 bits (475), Expect = 9e-47
 Identities = 89/89 (100%), Positives = 89/89 (100%)

Query: 2017 LIPLQSVMIPTLPSILGTHANHASHEPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSD 2076
            LIPLQSVMIPTLPSILGTHANHASHEPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSD
Sbjct: 1    LIPLQSVMIPTLPSILGTHANHASHEPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSD 60

Query: 2077 GKFYIMMCKPKDDLRKDCRLMEFNSLINK 2105
            GKFYIMMCKPKDDLRKDCRLMEFNSLINK
Sbjct: 61   GKFYIMMCKPKDDLRKDCRLMEFNSLINK 89


>gi|20336199 ataxia telangiectasia mutated isoform 2 [Homo sapiens]
          Length = 1708

 Score =  119 bits (298), Expect = 3e-26
 Identities = 198/919 (21%), Positives = 368/919 (40%), Gaps = 135/919 (14%)

Query: 949  LCCRAWDCFVRCLDHACLGSLLSH---VIVALLPLIHIQ---PKETAAIFHYLIIENRDA 1002
            LCC       +     C  +L +H   ++  L+PL++ Q    K+   +  YL+I+N+D 
Sbjct: 145  LCCDLLSQVCQTAVTYCKDALENHLHVIVGTLIPLVYEQVEVQKQVLDLLKYLVIDNKDN 204

Query: 1003 VQDFLHEIYFL---PDHPELKKIKAVLQEYRKETSESTDLQTTLQLSMKAIQHENVDVRI 1059
               ++  I  L   PDH   K ++   Q+ +      + L+        ++       R+
Sbjct: 205  ENLYI-TIKLLDPFPDHVVFKDLRITQQKIKYSRGPFSLLEEINHFLSVSVYDALPLTRL 263

Query: 1060 HALTSLKETL--YKNQEKLIKYATDSETVEPIISQLVTVLLKGCQDA-----NSQARLLC 1112
              L  L+  L  +K+Q   I  A+     + I+ +LV  LL+  + A       +     
Sbjct: 264  EGLKDLRRQLELHKDQMVDIMRASQDNPQDGIMVKLVVNLLQLSKMAINHTGEKEVLEAV 323

Query: 1113 GECLGELGAIDPGRLDFSTTETQ-GKDFTFVTGV---EDSSFAYGLLMELTRAYLAYADN 1168
            G CLGE+G ID     FST   Q  KD ++   +   ED    +  +M      L Y +N
Sbjct: 324  GSCLGEVGPID-----FSTIAIQHSKDASYTKALKLFEDKELQWTFIM------LTYLNN 372

Query: 1169 SRAQDSAAYAIQELLSIYDCREMETNGPGHQLWRRFPEHVREILEPHLNTRYKSSQ---- 1224
            +  +D        +  + +    +T     ++++   + +   L+P   +R K  +    
Sbjct: 373  TLVEDCVKVRSAAVTCLKNILATKTGHSFWEIYKMTTDPMLAYLQPFRTSRKKFLEVPRF 432

Query: 1225 -KSTDWSGVKKPIYLSKLGSNFAEWSASWAGYLITK--VRHDLASKIFTCCSIMMKHDFK 1281
             K   + G+        L  N   W  +     +     + ++   +   C +  K DF 
Sbjct: 433  DKENPFEGLDDINLWIPLSENHDIWIKTLTCAFLDSGGTKCEILQLLKPMCEV--KTDFC 490

Query: 1282 VTIYLLPHILVYVLLGCNQEDQQEVYAEIMAVLKHDDQHTINTQDIASDLCQLSTQTVFS 1341
             T+  LP+++  +LL    +D  E +  +++          + Q   +   +  +QT  S
Sbjct: 491  QTV--LPYLIHDILL----QDTNESWRNLLST---------HVQGFFTSCLRHFSQTSRS 535

Query: 1342 MLD-HLTQWARHKFQALKAEKCPHSKSNRNKVDSMVSTVDYEDYQ----SVTRFLDLIPQ 1396
                +L   + H F+      C   KS R    +M++ VDY   Q    S T F D    
Sbjct: 536  TTPANLDSESEHFFRC-----CLDKKSQR----TMLAVVDYMRRQKRPSSGTIFNDAFWL 586

Query: 1397 DT----LAVASFRSKAYTRAVMHFESFITEKKQNIQEH--LGF----------------- 1433
            D     +A  +    A+  A+++ E +  +K  + QE   L F                 
Sbjct: 587  DLNYLEVAKVAQSCAAHFTALLYAEIYADKKSMDDQEKRSLAFEEGSQSTTISSLSEKSK 646

Query: 1434 ----------LQKLYAAMHEPDGVAGVSAIRKAEPSLKEQILEHESLGLLRDATACYDRA 1483
                      L ++Y ++ EPD + G    +  +P  + +  EHE++      T   + A
Sbjct: 647  EETGISLQDLLLEIYRSIGEPDSLYGCGGGKMLQPITRLRTYEHEAMWGKALVTYDLETA 706

Query: 1484 IQLEPDQIIHYHGVVKSMLGLGQLSTVITQVNGVHANRSEWTDELNTYRVEAAWKLSQWD 1543
            I     Q     G+++++  LG    +   + G+     +W  EL     +AAW+  QWD
Sbjct: 707  IPSSTRQA----GIIQALQNLGLCHILSVYLKGLDYENKDWCPELEELHYQAAWRNMQWD 762

Query: 1544 LVENYLAADGKSTTWSVRLGQLLLSAKKRDITAFYDSLKLVRAEQIVPLSAASFERGSYQ 1603
               + ++ + + T++   L   L S + R+ + FY+SLK  R +++  +   S E  S  
Sbjct: 763  HCTS-VSKEVEGTSYHESLYNALQSLRDREFSTFYESLKYARVKEVEEMCKRSLE--SVY 819

Query: 1604 RGYEYIVRLHMLCELEHSIKPLFQHSPGDSS-QEDSLNWVARLEMTQNS-YRAKEPILAL 1661
              Y  + RL  + ELE SI  LF  S       E  + W    ++ ++S +  +EPI+AL
Sbjct: 820  SLYPTLSRLQAIGELE-SIGELFSRSVTHRQLSEVYIKWQKHSQLLKDSDFSFQEPIMAL 878

Query: 1662 RRALLSLNKRPDYNEMVGEC--------WLQSARVARKAGHHQTAYNALL-----NAGES 1708
            R  +L +    + +    EC         ++ + +AR   + Q    A+      N+   
Sbjct: 879  RTVILEILMEKEMDNSQRECIKDILTKHLVELSILARTFKNTQLPERAIFQIKQYNSVSC 938

Query: 1709 RLAELYVERAKWLWSKGDVHQALIVLQKGVE----LCFPENETPPEGKNMLIHGRAMLLV 1764
             ++E  +E A+  W+K +   AL +L++ ++     C   N   P  K  L +   + + 
Sbjct: 939  GVSEWQLEEAQVFWAKKEQSLALSILKQMIKKLDASCAANN---PSLK--LTYTECLRVC 993

Query: 1765 GRFMEETANFESNAIMKKY 1783
            G ++ ET       IM+ Y
Sbjct: 994  GNWLAETCLENPAVIMQTY 1012



 Score = 38.9 bits (89), Expect = 0.054
 Identities = 53/225 (23%), Positives = 83/225 (36%), Gaps = 25/225 (11%)

Query: 1888 TNYLAPYQFLTAFSQLISRIC--HSHDEVFVVLMEIIAK--VFLAYPQQAMWMMTA--VS 1941
            T  +    F    + LISRI   H H  +F++L    A    FL  P+ A        V 
Sbjct: 1181 TKMMGGLGFHEVLNNLISRISMDHPHHTLFIILALANANRDEFLTKPEVARRSRITKNVP 1240

Query: 1942 KSSYPMRVNRCKEILNKAIHMKKSLEKFVGDATRLTDKLLELCNKPVDGSSSTLSMSTHF 2001
            K S  +  +R +        ++    + V     L D  + L N            +T +
Sbjct: 1241 KQSSQLDEDRTEAANRIICTIRSRRPQMVRSVEALCDAYIILANLD----------ATQW 1290

Query: 2002 KMLKKLVEEATFSEI--LIPLQSVMIPTLPSILGTHANHASHEPFPGHWAYIAGFDDMVE 2059
            K  +K +       I  L  L+ V++PT+            H    G+   I  F     
Sbjct: 1291 KTQRKGINIPADQPITKLKNLEDVVVPTMEI-------KVDHTGEYGNLVTIQSFKAEFR 1343

Query: 2060 ILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFNSLIN 2104
            +   +  PK I   GSDGK    + K +DDLR+D  + +   + N
Sbjct: 1344 LAGGVNLPKIIDCVGSDGKERRQLVKGRDDLRQDAVMQQVFQMCN 1388


>gi|71902540 ataxia telangiectasia mutated isoform 1 [Homo sapiens]
          Length = 3056

 Score =  119 bits (298), Expect = 3e-26
 Identities = 198/919 (21%), Positives = 368/919 (40%), Gaps = 135/919 (14%)

Query: 949  LCCRAWDCFVRCLDHACLGSLLSH---VIVALLPLIHIQ---PKETAAIFHYLIIENRDA 1002
            LCC       +     C  +L +H   ++  L+PL++ Q    K+   +  YL+I+N+D 
Sbjct: 1493 LCCDLLSQVCQTAVTYCKDALENHLHVIVGTLIPLVYEQVEVQKQVLDLLKYLVIDNKDN 1552

Query: 1003 VQDFLHEIYFL---PDHPELKKIKAVLQEYRKETSESTDLQTTLQLSMKAIQHENVDVRI 1059
               ++  I  L   PDH   K ++   Q+ +      + L+        ++       R+
Sbjct: 1553 ENLYI-TIKLLDPFPDHVVFKDLRITQQKIKYSRGPFSLLEEINHFLSVSVYDALPLTRL 1611

Query: 1060 HALTSLKETL--YKNQEKLIKYATDSETVEPIISQLVTVLLKGCQDA-----NSQARLLC 1112
              L  L+  L  +K+Q   I  A+     + I+ +LV  LL+  + A       +     
Sbjct: 1612 EGLKDLRRQLELHKDQMVDIMRASQDNPQDGIMVKLVVNLLQLSKMAINHTGEKEVLEAV 1671

Query: 1113 GECLGELGAIDPGRLDFSTTETQ-GKDFTFVTGV---EDSSFAYGLLMELTRAYLAYADN 1168
            G CLGE+G ID     FST   Q  KD ++   +   ED    +  +M      L Y +N
Sbjct: 1672 GSCLGEVGPID-----FSTIAIQHSKDASYTKALKLFEDKELQWTFIM------LTYLNN 1720

Query: 1169 SRAQDSAAYAIQELLSIYDCREMETNGPGHQLWRRFPEHVREILEPHLNTRYKSSQ---- 1224
            +  +D        +  + +    +T     ++++   + +   L+P   +R K  +    
Sbjct: 1721 TLVEDCVKVRSAAVTCLKNILATKTGHSFWEIYKMTTDPMLAYLQPFRTSRKKFLEVPRF 1780

Query: 1225 -KSTDWSGVKKPIYLSKLGSNFAEWSASWAGYLITK--VRHDLASKIFTCCSIMMKHDFK 1281
             K   + G+        L  N   W  +     +     + ++   +   C +  K DF 
Sbjct: 1781 DKENPFEGLDDINLWIPLSENHDIWIKTLTCAFLDSGGTKCEILQLLKPMCEV--KTDFC 1838

Query: 1282 VTIYLLPHILVYVLLGCNQEDQQEVYAEIMAVLKHDDQHTINTQDIASDLCQLSTQTVFS 1341
             T+  LP+++  +LL    +D  E +  +++          + Q   +   +  +QT  S
Sbjct: 1839 QTV--LPYLIHDILL----QDTNESWRNLLST---------HVQGFFTSCLRHFSQTSRS 1883

Query: 1342 MLD-HLTQWARHKFQALKAEKCPHSKSNRNKVDSMVSTVDYEDYQ----SVTRFLDLIPQ 1396
                +L   + H F+      C   KS R    +M++ VDY   Q    S T F D    
Sbjct: 1884 TTPANLDSESEHFFRC-----CLDKKSQR----TMLAVVDYMRRQKRPSSGTIFNDAFWL 1934

Query: 1397 DT----LAVASFRSKAYTRAVMHFESFITEKKQNIQEH--LGF----------------- 1433
            D     +A  +    A+  A+++ E +  +K  + QE   L F                 
Sbjct: 1935 DLNYLEVAKVAQSCAAHFTALLYAEIYADKKSMDDQEKRSLAFEEGSQSTTISSLSEKSK 1994

Query: 1434 ----------LQKLYAAMHEPDGVAGVSAIRKAEPSLKEQILEHESLGLLRDATACYDRA 1483
                      L ++Y ++ EPD + G    +  +P  + +  EHE++      T   + A
Sbjct: 1995 EETGISLQDLLLEIYRSIGEPDSLYGCGGGKMLQPITRLRTYEHEAMWGKALVTYDLETA 2054

Query: 1484 IQLEPDQIIHYHGVVKSMLGLGQLSTVITQVNGVHANRSEWTDELNTYRVEAAWKLSQWD 1543
            I     Q     G+++++  LG    +   + G+     +W  EL     +AAW+  QWD
Sbjct: 2055 IPSSTRQA----GIIQALQNLGLCHILSVYLKGLDYENKDWCPELEELHYQAAWRNMQWD 2110

Query: 1544 LVENYLAADGKSTTWSVRLGQLLLSAKKRDITAFYDSLKLVRAEQIVPLSAASFERGSYQ 1603
               + ++ + + T++   L   L S + R+ + FY+SLK  R +++  +   S E  S  
Sbjct: 2111 HCTS-VSKEVEGTSYHESLYNALQSLRDREFSTFYESLKYARVKEVEEMCKRSLE--SVY 2167

Query: 1604 RGYEYIVRLHMLCELEHSIKPLFQHSPGDSS-QEDSLNWVARLEMTQNS-YRAKEPILAL 1661
              Y  + RL  + ELE SI  LF  S       E  + W    ++ ++S +  +EPI+AL
Sbjct: 2168 SLYPTLSRLQAIGELE-SIGELFSRSVTHRQLSEVYIKWQKHSQLLKDSDFSFQEPIMAL 2226

Query: 1662 RRALLSLNKRPDYNEMVGEC--------WLQSARVARKAGHHQTAYNALL-----NAGES 1708
            R  +L +    + +    EC         ++ + +AR   + Q    A+      N+   
Sbjct: 2227 RTVILEILMEKEMDNSQRECIKDILTKHLVELSILARTFKNTQLPERAIFQIKQYNSVSC 2286

Query: 1709 RLAELYVERAKWLWSKGDVHQALIVLQKGVE----LCFPENETPPEGKNMLIHGRAMLLV 1764
             ++E  +E A+  W+K +   AL +L++ ++     C   N   P  K  L +   + + 
Sbjct: 2287 GVSEWQLEEAQVFWAKKEQSLALSILKQMIKKLDASCAANN---PSLK--LTYTECLRVC 2341

Query: 1765 GRFMEETANFESNAIMKKY 1783
            G ++ ET       IM+ Y
Sbjct: 2342 GNWLAETCLENPAVIMQTY 2360



 Score = 38.9 bits (89), Expect = 0.054
 Identities = 53/225 (23%), Positives = 83/225 (36%), Gaps = 25/225 (11%)

Query: 1888 TNYLAPYQFLTAFSQLISRIC--HSHDEVFVVLMEIIAK--VFLAYPQQAMWMMTA--VS 1941
            T  +    F    + LISRI   H H  +F++L    A    FL  P+ A        V 
Sbjct: 2529 TKMMGGLGFHEVLNNLISRISMDHPHHTLFIILALANANRDEFLTKPEVARRSRITKNVP 2588

Query: 1942 KSSYPMRVNRCKEILNKAIHMKKSLEKFVGDATRLTDKLLELCNKPVDGSSSTLSMSTHF 2001
            K S  +  +R +        ++    + V     L D  + L N            +T +
Sbjct: 2589 KQSSQLDEDRTEAANRIICTIRSRRPQMVRSVEALCDAYIILANLD----------ATQW 2638

Query: 2002 KMLKKLVEEATFSEI--LIPLQSVMIPTLPSILGTHANHASHEPFPGHWAYIAGFDDMVE 2059
            K  +K +       I  L  L+ V++PT+            H    G+   I  F     
Sbjct: 2639 KTQRKGINIPADQPITKLKNLEDVVVPTMEI-------KVDHTGEYGNLVTIQSFKAEFR 2691

Query: 2060 ILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFNSLIN 2104
            +   +  PK I   GSDGK    + K +DDLR+D  + +   + N
Sbjct: 2692 LAGGVNLPKIIDCVGSDGKERRQLVKGRDDLRQDAVMQQVFQMCN 2736


>gi|169218268 PREDICTED: similar to Serine-protein kinase ATM, partial
            [Homo sapiens]
          Length = 2934

 Score =  119 bits (298), Expect = 3e-26
 Identities = 198/919 (21%), Positives = 368/919 (40%), Gaps = 135/919 (14%)

Query: 949  LCCRAWDCFVRCLDHACLGSLLSH---VIVALLPLIHIQ---PKETAAIFHYLIIENRDA 1002
            LCC       +     C  +L +H   ++  L+PL++ Q    K+   +  YL+I+N+D 
Sbjct: 1371 LCCDLLSQVCQTAVTYCKDALENHLHVIVGTLIPLVYEQVEVQKQVLDLLKYLVIDNKDN 1430

Query: 1003 VQDFLHEIYFL---PDHPELKKIKAVLQEYRKETSESTDLQTTLQLSMKAIQHENVDVRI 1059
               ++  I  L   PDH   K ++   Q+ +      + L+        ++       R+
Sbjct: 1431 ENLYI-TIKLLDPFPDHVVFKDLRITQQKIKYSRGPFSLLEEINHFLSVSVYDALPLTRL 1489

Query: 1060 HALTSLKETL--YKNQEKLIKYATDSETVEPIISQLVTVLLKGCQDA-----NSQARLLC 1112
              L  L+  L  +K+Q   I  A+     + I+ +LV  LL+  + A       +     
Sbjct: 1490 EGLKDLRRQLELHKDQMVDIMRASQDNPQDGIMVKLVVNLLQLSKMAINHTGEKEVLEAV 1549

Query: 1113 GECLGELGAIDPGRLDFSTTETQ-GKDFTFVTGV---EDSSFAYGLLMELTRAYLAYADN 1168
            G CLGE+G ID     FST   Q  KD ++   +   ED    +  +M      L Y +N
Sbjct: 1550 GSCLGEVGPID-----FSTIAIQHSKDASYTKALKLFEDKELQWTFIM------LTYLNN 1598

Query: 1169 SRAQDSAAYAIQELLSIYDCREMETNGPGHQLWRRFPEHVREILEPHLNTRYKSSQ---- 1224
            +  +D        +  + +    +T     ++++   + +   L+P   +R K  +    
Sbjct: 1599 TLVEDCVKVRSAAVTCLKNILATKTGHSFWEIYKMTTDPMLAYLQPFRTSRKKFLEVPRF 1658

Query: 1225 -KSTDWSGVKKPIYLSKLGSNFAEWSASWAGYLITK--VRHDLASKIFTCCSIMMKHDFK 1281
             K   + G+        L  N   W  +     +     + ++   +   C +  K DF 
Sbjct: 1659 DKENPFEGLDDINLWIPLSENHDIWIKTLTCAFLDSGGTKCEILQLLKPMCEV--KTDFC 1716

Query: 1282 VTIYLLPHILVYVLLGCNQEDQQEVYAEIMAVLKHDDQHTINTQDIASDLCQLSTQTVFS 1341
             T+  LP+++  +LL    +D  E +  +++          + Q   +   +  +QT  S
Sbjct: 1717 QTV--LPYLIHDILL----QDTNESWRNLLST---------HVQGFFTSCLRHFSQTSRS 1761

Query: 1342 MLD-HLTQWARHKFQALKAEKCPHSKSNRNKVDSMVSTVDYEDYQ----SVTRFLDLIPQ 1396
                +L   + H F+      C   KS R    +M++ VDY   Q    S T F D    
Sbjct: 1762 TTPANLDSESEHFFRC-----CLDKKSQR----TMLAVVDYMRRQKRPSSGTIFNDAFWL 1812

Query: 1397 DT----LAVASFRSKAYTRAVMHFESFITEKKQNIQEH--LGF----------------- 1433
            D     +A  +    A+  A+++ E +  +K  + QE   L F                 
Sbjct: 1813 DLNYLEVAKVAQSCAAHFTALLYAEIYADKKSMDDQEKRSLAFEEGSQSTTISSLSEKSK 1872

Query: 1434 ----------LQKLYAAMHEPDGVAGVSAIRKAEPSLKEQILEHESLGLLRDATACYDRA 1483
                      L ++Y ++ EPD + G    +  +P  + +  EHE++      T   + A
Sbjct: 1873 EETGISLQDLLLEIYRSIGEPDSLYGCGGGKMLQPITRLRTYEHEAMWGKALVTYDLETA 1932

Query: 1484 IQLEPDQIIHYHGVVKSMLGLGQLSTVITQVNGVHANRSEWTDELNTYRVEAAWKLSQWD 1543
            I     Q     G+++++  LG    +   + G+     +W  EL     +AAW+  QWD
Sbjct: 1933 IPSSTRQA----GIIQALQNLGLCHILSVYLKGLDYENKDWCPELEELHYQAAWRNMQWD 1988

Query: 1544 LVENYLAADGKSTTWSVRLGQLLLSAKKRDITAFYDSLKLVRAEQIVPLSAASFERGSYQ 1603
               + ++ + + T++   L   L S + R+ + FY+SLK  R +++  +   S E  S  
Sbjct: 1989 HCTS-VSKEVEGTSYHESLYNALQSLRDREFSTFYESLKYARVKEVEEMCKRSLE--SVY 2045

Query: 1604 RGYEYIVRLHMLCELEHSIKPLFQHSPGDSS-QEDSLNWVARLEMTQNS-YRAKEPILAL 1661
              Y  + RL  + ELE SI  LF  S       E  + W    ++ ++S +  +EPI+AL
Sbjct: 2046 SLYPTLSRLQAIGELE-SIGELFSRSVTHRQLSEVYIKWQKHSQLLKDSDFSFQEPIMAL 2104

Query: 1662 RRALLSLNKRPDYNEMVGEC--------WLQSARVARKAGHHQTAYNALL-----NAGES 1708
            R  +L +    + +    EC         ++ + +AR   + Q    A+      N+   
Sbjct: 2105 RTVILEILMEKEMDNSQRECIKDILTKHLVELSILARTFKNTQLPERAIFQIKQYNSVSC 2164

Query: 1709 RLAELYVERAKWLWSKGDVHQALIVLQKGVE----LCFPENETPPEGKNMLIHGRAMLLV 1764
             ++E  +E A+  W+K +   AL +L++ ++     C   N   P  K  L +   + + 
Sbjct: 2165 GVSEWQLEEAQVFWAKKEQSLALSILKQMIKKLDASCAANN---PSLK--LTYTECLRVC 2219

Query: 1765 GRFMEETANFESNAIMKKY 1783
            G ++ ET       IM+ Y
Sbjct: 2220 GNWLAETCLENPAVIMQTY 2238



 Score = 38.9 bits (89), Expect = 0.054
 Identities = 53/225 (23%), Positives = 83/225 (36%), Gaps = 25/225 (11%)

Query: 1888 TNYLAPYQFLTAFSQLISRIC--HSHDEVFVVLMEIIAK--VFLAYPQQAMWMMTA--VS 1941
            T  +    F    + LISRI   H H  +F++L    A    FL  P+ A        V 
Sbjct: 2407 TKMMGGLGFHEVLNNLISRISMDHPHHTLFIILALANANRDEFLTKPEVARRSRITKNVP 2466

Query: 1942 KSSYPMRVNRCKEILNKAIHMKKSLEKFVGDATRLTDKLLELCNKPVDGSSSTLSMSTHF 2001
            K S  +  +R +        ++    + V     L D  + L N            +T +
Sbjct: 2467 KQSSQLDEDRTEAANRIICTIRSRRPQMVRSVEALCDAYIILANLD----------ATQW 2516

Query: 2002 KMLKKLVEEATFSEI--LIPLQSVMIPTLPSILGTHANHASHEPFPGHWAYIAGFDDMVE 2059
            K  +K +       I  L  L+ V++PT+            H    G+   I  F     
Sbjct: 2517 KTQRKGINIPADQPITKLKNLEDVVVPTMEI-------KVDHTGEYGNLVTIQSFKAEFR 2569

Query: 2060 ILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFNSLIN 2104
            +   +  PK I   GSDGK    + K +DDLR+D  + +   + N
Sbjct: 2570 LAGGVNLPKIIDCVGSDGKERRQLVKGRDDLRQDAVMQQVFQMCN 2614


>gi|126032350 protein kinase, DNA-activated, catalytic polypeptide
            isoform 2 [Homo sapiens]
          Length = 4097

 Score = 51.6 bits (122), Expect = 8e-06
 Identities = 23/63 (36%), Positives = 42/63 (66%)

Query: 2042 EPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFNS 2101
            +P P +   IAGFD+ V ++ASL++PK+I ++G D + +  + K  +DLR+D R+ +   
Sbjct: 3710 KPLPEYHVRIAGFDERVTVMASLRRPKRIIIRGHDEREHPFLVKGGEDLRQDQRVEQLFQ 3769

Query: 2102 LIN 2104
            ++N
Sbjct: 3770 VMN 3772


>gi|13654237 protein kinase, DNA-activated, catalytic polypeptide
            isoform 1 [Homo sapiens]
          Length = 4128

 Score = 51.6 bits (122), Expect = 8e-06
 Identities = 23/63 (36%), Positives = 42/63 (66%)

Query: 2042 EPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFNS 2101
            +P P +   IAGFD+ V ++ASL++PK+I ++G D + +  + K  +DLR+D R+ +   
Sbjct: 3710 KPLPEYHVRIAGFDERVTVMASLRRPKRIIIRGHDEREHPFLVKGGEDLRQDQRVEQLFQ 3769

Query: 2102 LIN 2104
            ++N
Sbjct: 3770 VMN 3772


>gi|113430845 PREDICTED: similar to protein kinase, DNA-activated,
            catalytic polypeptide [Homo sapiens]
          Length = 4096

 Score = 51.6 bits (122), Expect = 8e-06
 Identities = 23/63 (36%), Positives = 42/63 (66%)

Query: 2042 EPFPGHWAYIAGFDDMVEILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFNS 2101
            +P P +   IAGFD+ V ++ASL++PK+I ++G D + +  + K  +DLR+D R+ +   
Sbjct: 3709 KPLPEYHVRIAGFDERVTVMASLRRPKRIIIRGHDEREHPFLVKGGEDLRQDQRVEQLFQ 3768

Query: 2102 LIN 2104
            ++N
Sbjct: 3769 VMN 3771


>gi|4826730 FK506 binding protein 12-rapamycin associated protein 1
            [Homo sapiens]
          Length = 2549

 Score = 49.7 bits (117), Expect = 3e-05
 Identities = 78/307 (25%), Positives = 127/307 (41%), Gaps = 29/307 (9%)

Query: 1405 RSKAYTRAVMHFESFITEKKQNIQEHLGFLQKLYAAMHEPDGVAGV-SAIRKAEPSLKEQ 1463
            + +AY +A+ + E  +  +K      L  L  +   + +P+  AGV     K    L+ Q
Sbjct: 1389 KCRAYAKALHYKE--LEFQKGPTPAILESLISINNKLQQPEAAAGVLEYAMKHFGELEIQ 1446

Query: 1464 ILEHESLGLLRDATACYDRAIQLEPDQIIHYHGVVKSMLGLGQLSTVITQVNGVHANRSE 1523
               +E L    DA   YD+ +    D      G ++ +  LG+   +  Q        ++
Sbjct: 1447 ATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCCEKWTLVND 1506

Query: 1524 WTD-ELNTYRVEAAWKLSQWDLVENYLAA------DGKSTTWSVRLGQLLLSAKKRDITA 1576
             T  ++      AAW L QWD +E Y         DG      + L Q L S  ++ I  
Sbjct: 1507 ETQAKMARMAAAAAWGLGQWDSMEEYTCMIPRDTHDGAFYRAVLALHQDLFSLAQQCIDK 1566

Query: 1577 FYDSLKLVRAEQIVPLSAASFERGSYQRGYEYIVRLHMLCELEHSIKPLFQHSPGDSSQE 1636
              D   L+ AE    L+A + E  SY R Y  +V  HML ELE  I+  ++  P +  + 
Sbjct: 1567 ARD---LLDAE----LTAMAGE--SYSRAYGAMVSCHMLSELEEVIQ--YKLVP-ERREI 1614

Query: 1637 DSLNWVARLEMTQNSYRAKEPILALRRALLSLNKRPDYNEMVGECWLQSARVARKAGHHQ 1696
                W  RL+  Q      + IL +R  ++S      + +M    WL+ A +  K+G   
Sbjct: 1615 IRQIWWERLQGCQRIVEDWQKILMVRSLVVS-----PHEDM--RTWLKYASLCGKSGRLA 1667

Query: 1697 TAYNALL 1703
             A+  L+
Sbjct: 1668 LAHKTLV 1674



 Score = 43.9 bits (102), Expect = 0.002
 Identities = 17/47 (36%), Positives = 34/47 (72%)

Query: 2058 VEILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFNSLIN 2104
            ++++ S Q+P+K++L GS+G  ++ + K  +DLR+D R+M+   L+N
Sbjct: 2160 LQVITSKQRPRKLTLMGSNGHEFVFLLKGHEDLRQDERVMQLFGLVN 2206



 Score = 41.2 bits (95), Expect = 0.011
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 24/151 (15%)

Query: 1833 SLQYGNQFIYQSMPRMLTLWLDYGTKAYEWEKAGRSDRVQMRNDLGKINKVITEHTNYLA 1892
            SL  GN    Q   R+LTLW DYG     W                 +N+ + E    + 
Sbjct: 1893 SLSRGNNL--QDTLRVLTLWFDYG----HWPD---------------VNEALVEGVKAIQ 1931

Query: 1893 PYQFLTAFSQLISRICHSHDEVFVVLMEIIAKVFLAYPQQAMWMMTAVSKSSYPMRVNRC 1952
               +L    QLI+RI      V  ++ +++  +   +PQ  ++ +T  SKS+   R N  
Sbjct: 1932 IDTWLQVIPQLIARIDTPRPLVGRLIHQLLTDIGRYHPQALIYPLTVASKSTTTARHNAA 1991

Query: 1953 KEILNKAIHMKKSLEKFVGDATRLTDKLLEL 1983
             +IL        +L   V  A  ++++L+ +
Sbjct: 1992 NKILKNMCEHSNTL---VQQAMMVSEELIRV 2019


>gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens]
          Length = 3661

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 21/47 (44%), Positives = 30/47 (63%)

Query: 2058 VEILASLQKPKKISLKGSDGKFYIMMCKPKDDLRKDCRLMEFNSLIN 2104
            + IL +  KPKK+   GSDGK Y  + K  +DL  D R+M+F S++N
Sbjct: 2128 ITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLSIVN 2174


>gi|21361794 TIP120 protein [Homo sapiens]
          Length = 1230

 Score = 36.2 bits (82), Expect = 0.35
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 1021 KIKAVLQEYRKETSESTDLQTTLQLSMKAIQH--ENVDVRIHALTSLKETLYKNQEKLIK 1078
            ++K+V+ E     SE      +  L   ++ +  E +   +  +TS  +  Y     L +
Sbjct: 856  ELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKE 915

Query: 1079 YATDSETV--EPIISQLVTVLLKGCQDANSQARLLCGECLGELGAIDPGRL 1127
              + +  V  +P +  +  +LLK C+ A    R +  ECLG+L  IDP  L
Sbjct: 916  IISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETL 966


>gi|153791158 keratin 75 [Homo sapiens]
          Length = 551

 Score = 34.7 bits (78), Expect = 1.0
 Identities = 42/211 (19%), Positives = 88/211 (41%), Gaps = 28/211 (13%)

Query: 1355 QALKAEKCPHSKSNRNKVDSMVSTVDYEDYQSVTRFLDLIPQDTLAVASFRSKAYTRAVM 1414
            Q ++AE+    K+  NK  S +  V + + Q+       + +   A+   +     R  +
Sbjct: 143  QRVRAEEREQIKTLNNKFASFIDKVRFLEQQNK------VLETKWALLQEQGSRTVRQNL 196

Query: 1415 H--FESFITEKKQNIQEHLGFLQKLYAAMHEPDGVAGVSAIRKAEPSLKEQILEHESLGL 1472
               F+S+ +E ++ ++       +L A +     V     +R  +   K    E+E + L
Sbjct: 197  EPLFDSYTSELRRQLESITTERGRLEAELRNMQDVVEDFKVRYEDEINKRTAAENEFVAL 256

Query: 1473 LRDATACYDRAIQLE------PDQIIHYHGVVKSMLG-----LGQLSTVITQVNGVHAN- 1520
             +D  A Y   ++LE      P++I   H V  + L      +G  S V++  N  + + 
Sbjct: 257  KKDVDAAYMNKVELEAKVKSLPEEINFIHSVFDAELSQLQTQVGDTSVVLSMDNNRNLDL 316

Query: 1521 -------RSEWTDELNTYRVEA-AWKLSQWD 1543
                   ++++ D  N  R EA +W  ++++
Sbjct: 317  DSIIAEVKAQYEDIANRSRAEAESWYQTKYE 347


>gi|4507947 tyrosyl-tRNA synthetase [Homo sapiens]
          Length = 528

 Score = 33.5 bits (75), Expect = 2.3
 Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 15/165 (9%)

Query: 97  SDLLKAALCHL------LQYFLKFVPAGYESALQVRKVYVRNICKALLDVLGIEVD-AEY 149
           +D LKA  C +      L  +L  + A +E  L++R  Y  N+ KA+L+ +G+ ++  ++
Sbjct: 60  ADFLKAG-CEVTILFADLHAYLDNMKAPWE-LLELRVSYYENVIKAMLESIGVPLEKLKF 117

Query: 150 LLGPLYAALKMESMEIIEEIQCQTQQENLSSNSDGISP-KRRRLSSSLNPSKRAPKQTEE 208
           + G  Y   K  ++++       TQ ++  + ++ +   +   LS  L P  +A    EE
Sbjct: 118 IKGTDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPLLSGLLYPGLQA--LDEE 175

Query: 209 IKHVDMNQKSILWSALKQKAESLQISLEYS---GLKNPVIEMLEG 250
              VD     I    +   AE    +L YS    L NP++  L G
Sbjct: 176 YLKVDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTG 220


>gi|89886470 hypothetical protein LOC84960 [Homo sapiens]
          Length = 534

 Score = 32.7 bits (73), Expect = 3.8
 Identities = 48/235 (20%), Positives = 89/235 (37%), Gaps = 30/235 (12%)

Query: 34  LLKHLVEMDTDQLKLYEEPLSKLIKTLFPFEAEAYRNIEPVYLNMLLEKLCVMFEDGVLM 93
           LL HLV     +L+  +  L  L        ++   + E + L  ++ +L    E  ++ 
Sbjct: 109 LLIHLVRRRGQKLESMQLELDSL-------RSQPDASKEELRLLQIIRQLENNIEKTMIK 161

Query: 94  RLKSDLLKAALCHLLQYFLKFVPAGYESALQVRKVYVRNICKALLDVLGIEVDAEYLLGP 153
            + S  +      LL Y LK V AGY   L   +  V N C  L D+  +  DA  +   
Sbjct: 162 IITSQNIHLLYLDLLDY-LKTVLAGYPIELDKLQNLVVNYCSELSDMKIMSQDAMMITDE 220

Query: 154 LYAALKMESMEIIEEIQCQTQQENLSSNSDGISPKRRRLSSSLNPSKRAPKQTEEIKHVD 213
           +   ++      IEE + +  + N          ++++L   ++  + + K       +D
Sbjct: 221 VKRNMRQREASFIEERRARENRLN----------QQKKLIDKIHTKETSEKYRRGQMDLD 270

Query: 214 MNQKSILWSALK-QKAESLQISLEYSGLKNPVIEMLEGIAVVLQLTALCTVHCSH 267
                +    LK ++ E+    +EY      V+E ++             V CSH
Sbjct: 271 FPSNLMSTETLKLRRKETSTAEMEYQSGVTAVVEKVKS-----------AVRCSH 314


>gi|24415404 MDN1, midasin homolog [Homo sapiens]
          Length = 5596

 Score = 32.3 bits (72), Expect = 5.0
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 11/85 (12%)

Query: 894  MQLLSSSVGIEDKKMALNSLMSLMKLMGP-----------KHVSSVRVKMMTTLRTGLRF 942
            +QLL+   G   K MA+NS M   +L+G            + +  V   +   LR  L  
Sbjct: 2076 VQLLAHLTGHTLKIMAMNSAMDTTELLGGFEQVDLIRPWRRLLEKVEGTVRALLRDSLLI 2135

Query: 943  KDDFPELCCRAWDCFVRCLDHACLG 967
              D  E+  RAW  F+      CLG
Sbjct: 2136 SADDAEVVLRAWSHFLLTYKPKCLG 2160


>gi|19913369 transducin beta-like 3 [Homo sapiens]
          Length = 808

 Score = 32.3 bits (72), Expect = 5.0
 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 12/96 (12%)

Query: 629 LTTGDIG-----RAAKGDLV------PFALLHLLHCLLSKSASVSGAAYTEIRALV-AAK 676
           LT GD G      AA G  V      P     L HC L+ +A V   A  +   L+  A+
Sbjct: 263 LTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEAR 322

Query: 677 SVKLQSFFSQYKKPICQFLVESLHSSQMTALPNTPC 712
           S++LQ  F+ Y + +          S +    N+PC
Sbjct: 323 SLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPC 358


>gi|118582255 ATP-binding cassette, sub-family C, member 8 [Homo
           sapiens]
          Length = 1581

 Score = 32.0 bits (71), Expect = 6.6
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 7/90 (7%)

Query: 601 KELFVLRMKEAYTHAQISRNNELKDTLILTT--GDIGRAAKGDLVP---FALLHLLHCLL 655
           KE+  LR    YT   I  N  +    +L T  G +    + D  P   FA L L H L+
Sbjct: 528 KEMTSLRAFAIYTSISIFMNTAIPIAAVLITFVGHVSFFKEADFSPSVAFASLSLFHILV 587

Query: 656 SKSASVSGAAYTEIRALVAAKSVKLQSFFS 685
           +    +S    + ++ALV+ +  KL  F S
Sbjct: 588 TPLFLLSSVVRSTVKALVSVQ--KLSEFLS 615


>gi|40217803 leucine rich repeat containing 8 family, member E [Homo
            sapiens]
          Length = 796

 Score = 32.0 bits (71), Expect = 6.6
 Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 28/200 (14%)

Query: 1012 FLPDHPELKKIKAVLQEYRKETSESTDLQTTLQLSMKAIQHENVDVRIHALTSLKETLYK 1071
            FL DH ++ ++K   +E R+       L+   +L ++ +  + +  R   L SL+E    
Sbjct: 481  FLRDHLKVMRVKC--EELREVPLWVFGLRGLEELHLEGLFPQEL-ARAATLESLREL--- 534

Query: 1072 NQEKLIKYATDSETVEPIISQLVTVLLKGCQDANSQARLLCGECLGELGAIDPGRLDFST 1131
             Q K++   +++  V   ++  V   L+     N  ARL+    L +L A+    L    
Sbjct: 535  KQLKVLSLRSNAGKVPASVTD-VAGHLQRLSLHNDGARLVALNSLKKLAALRELELVACG 593

Query: 1132 TETQGKDFTFVTGVEDSSFAYGLLMELTRAYLAYADNSRAQDSAAYAIQELLSIYDCREM 1191
             E           +  + F+ G L EL             +D+   +I+E+LS   CR++
Sbjct: 594  LER----------IPHAVFSLGALQELD-----------LKDNHLRSIEEILSFQHCRKL 632

Query: 1192 ETNGPGHQLWRRFPEHVREI 1211
             T    H      PEHVR++
Sbjct: 633  VTLRLWHNQIAYVPEHVRKL 652


>gi|110815798 ovochymase 1 [Homo sapiens]
          Length = 1134

 Score = 32.0 bits (71), Expect = 6.6
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 10/71 (14%)

Query: 327 IYDALIYMQVNSSFEDHILEDLCGMLSLPWIYSHSD--------DGCLKLTTFAANLLTL 378
           IYDA++      S E H L  LCGML++  I+S S+        DG  +L  F A    L
Sbjct: 474 IYDAVVIY--GDSEEKHKLAKLCGMLTITSIFSSSNMTVIYFKSDGKNRLQGFKARFTIL 531

Query: 379 SCRISDSYSPQ 389
                + + P+
Sbjct: 532 PSESLNKFEPK 542


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,516,479
Number of Sequences: 37866
Number of extensions: 3068781
Number of successful extensions: 7817
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7745
Number of HSP's gapped (non-prelim): 59
length of query: 2105
length of database: 18,247,518
effective HSP length: 118
effective length of query: 1987
effective length of database: 13,779,330
effective search space: 27379528710
effective search space used: 27379528710
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.