Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 169214602

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169214602 PREDICTED: similar to hCG2041260 [Homo sapiens]
         (388 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|113429036 PREDICTED: hypothetical protein [Homo sapiens]           825   0.0  
gi|169214602 PREDICTED: similar to hCG2041260 [Homo sapiens]          825   0.0  
gi|169214870 PREDICTED: similar to hCG2041260 [Homo sapiens]          797   0.0  
gi|209969800 RPE-spondin [Homo sapiens]                               150   2e-36
gi|7710145 methyl-CpG binding domain protein 2 testis-specific i...    37   0.030
gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo s...    37   0.030
gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens]                35   0.12 
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]            35   0.12 
gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]            35   0.12 
gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]            35   0.12 
gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]            35   0.12 
gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]            35   0.12 
gi|40255047 pleckstrin homology domain containing, family H (wit...    35   0.12 
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ...    35   0.15 
gi|239755342 PREDICTED: hypothetical protein [Homo sapiens]            35   0.15 
gi|239754599 PREDICTED: hypothetical protein [Homo sapiens]            35   0.15 
gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo ...    35   0.15 
gi|239749829 PREDICTED: hypothetical protein XP_002347170 [Homo ...    35   0.15 
gi|239744119 PREDICTED: hypothetical protein XP_002343063 [Homo ...    35   0.15 
gi|10863889 squamous cell carcinoma antigen recognized by T cell...    35   0.15 
gi|61743975 SORCS receptor 1 isoform b [Homo sapiens]                  34   0.20 
gi|61743973 SORCS receptor 1 isoform a [Homo sapiens]                  34   0.20 
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]            34   0.26 
gi|9966841 cell death regulator aven [Homo sapiens]                    34   0.26 
gi|222446611 R-spondin family, member 2 [Homo sapiens]                 33   0.33 
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            33   0.33 
gi|239756562 PREDICTED: hypothetical protein [Homo sapiens]            33   0.33 
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]            33   0.33 
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]            33   0.33 
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ...    33   0.33 

>gi|113429036 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 388

 Score =  825 bits (2131), Expect = 0.0
 Identities = 388/388 (100%), Positives = 388/388 (100%)

Query: 1   MGMRGVARILSLSLVLAAVATGAWERGPLGVLLPWQGSAALGRCCPGRDPMFVARGPPRC 60
           MGMRGVARILSLSLVLAAVATGAWERGPLGVLLPWQGSAALGRCCPGRDPMFVARGPPRC
Sbjct: 1   MGMRGVARILSLSLVLAAVATGAWERGPLGVLLPWQGSAALGRCCPGRDPMFVARGPPRC 60

Query: 61  FCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLG 120
           FCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLG
Sbjct: 61  FCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLG 120

Query: 121 GVTRAEGGARRLGTGRLRAEKDAQVMNLGAFISGDLKERDSWRVEGCFGGGAQGLLTGLE 180
           GVTRAEGGARRLGTGRLRAEKDAQVMNLGAFISGDLKERDSWRVEGCFGGGAQGLLTGLE
Sbjct: 121 GVTRAEGGARRLGTGRLRAEKDAQVMNLGAFISGDLKERDSWRVEGCFGGGAQGLLTGLE 180

Query: 181 GRQEGGGFGPDTTFSSSSLLHCGTVEWLQSLCETCQVSYHVHRRRVLQEPRNGGVPFPLL 240
           GRQEGGGFGPDTTFSSSSLLHCGTVEWLQSLCETCQVSYHVHRRRVLQEPRNGGVPFPLL
Sbjct: 181 GRQEGGGFGPDTTFSSSSLLHCGTVEWLQSLCETCQVSYHVHRRRVLQEPRNGGVPFPLL 240

Query: 241 EERAGCVEYWSHQGVECQQSLHEWGWAPGVALSGNIPALITTGSYGKEWEKYCVQFQLGS 300
           EERAGCVEYWSHQGVECQQSLHEWGWAPGVALSGNIPALITTGSYGKEWEKYCVQFQLGS
Sbjct: 241 EERAGCVEYWSHQGVECQQSLHEWGWAPGVALSGNIPALITTGSYGKEWEKYCVQFQLGS 300

Query: 301 IPGSCGQARAPHAQWTRYLSQGHTVCVRSEWPAQDTRSRRCYGDGGGAKGNKMWLWQAAS 360
           IPGSCGQARAPHAQWTRYLSQGHTVCVRSEWPAQDTRSRRCYGDGGGAKGNKMWLWQAAS
Sbjct: 301 IPGSCGQARAPHAQWTRYLSQGHTVCVRSEWPAQDTRSRRCYGDGGGAKGNKMWLWQAAS 360

Query: 361 HPRCRGTWEKLGQLRHCSCPVVHSLVFI 388
           HPRCRGTWEKLGQLRHCSCPVVHSLVFI
Sbjct: 361 HPRCRGTWEKLGQLRHCSCPVVHSLVFI 388


>gi|169214602 PREDICTED: similar to hCG2041260 [Homo sapiens]
          Length = 388

 Score =  825 bits (2131), Expect = 0.0
 Identities = 388/388 (100%), Positives = 388/388 (100%)

Query: 1   MGMRGVARILSLSLVLAAVATGAWERGPLGVLLPWQGSAALGRCCPGRDPMFVARGPPRC 60
           MGMRGVARILSLSLVLAAVATGAWERGPLGVLLPWQGSAALGRCCPGRDPMFVARGPPRC
Sbjct: 1   MGMRGVARILSLSLVLAAVATGAWERGPLGVLLPWQGSAALGRCCPGRDPMFVARGPPRC 60

Query: 61  FCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLG 120
           FCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLG
Sbjct: 61  FCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLG 120

Query: 121 GVTRAEGGARRLGTGRLRAEKDAQVMNLGAFISGDLKERDSWRVEGCFGGGAQGLLTGLE 180
           GVTRAEGGARRLGTGRLRAEKDAQVMNLGAFISGDLKERDSWRVEGCFGGGAQGLLTGLE
Sbjct: 121 GVTRAEGGARRLGTGRLRAEKDAQVMNLGAFISGDLKERDSWRVEGCFGGGAQGLLTGLE 180

Query: 181 GRQEGGGFGPDTTFSSSSLLHCGTVEWLQSLCETCQVSYHVHRRRVLQEPRNGGVPFPLL 240
           GRQEGGGFGPDTTFSSSSLLHCGTVEWLQSLCETCQVSYHVHRRRVLQEPRNGGVPFPLL
Sbjct: 181 GRQEGGGFGPDTTFSSSSLLHCGTVEWLQSLCETCQVSYHVHRRRVLQEPRNGGVPFPLL 240

Query: 241 EERAGCVEYWSHQGVECQQSLHEWGWAPGVALSGNIPALITTGSYGKEWEKYCVQFQLGS 300
           EERAGCVEYWSHQGVECQQSLHEWGWAPGVALSGNIPALITTGSYGKEWEKYCVQFQLGS
Sbjct: 241 EERAGCVEYWSHQGVECQQSLHEWGWAPGVALSGNIPALITTGSYGKEWEKYCVQFQLGS 300

Query: 301 IPGSCGQARAPHAQWTRYLSQGHTVCVRSEWPAQDTRSRRCYGDGGGAKGNKMWLWQAAS 360
           IPGSCGQARAPHAQWTRYLSQGHTVCVRSEWPAQDTRSRRCYGDGGGAKGNKMWLWQAAS
Sbjct: 301 IPGSCGQARAPHAQWTRYLSQGHTVCVRSEWPAQDTRSRRCYGDGGGAKGNKMWLWQAAS 360

Query: 361 HPRCRGTWEKLGQLRHCSCPVVHSLVFI 388
           HPRCRGTWEKLGQLRHCSCPVVHSLVFI
Sbjct: 361 HPRCRGTWEKLGQLRHCSCPVVHSLVFI 388


>gi|169214870 PREDICTED: similar to hCG2041260 [Homo sapiens]
          Length = 412

 Score =  797 bits (2058), Expect = 0.0
 Identities = 381/412 (92%), Positives = 383/412 (92%), Gaps = 24/412 (5%)

Query: 1   MGMRGVARILSLSLVLAAVATGAWERGPLGVLLPWQGSAALGRCCPGRDPMFVARGPPRC 60
           MGMRGVARILSLSLVLAAVATGAWERGPLGVLLPWQGSAALGRCCPGRDPMFVARGPPRC
Sbjct: 1   MGMRGVARILSLSLVLAAVATGAWERGPLGVLLPWQGSAALGRCCPGRDPMFVARGPPRC 60

Query: 61  FCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLG 120
           FCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLG
Sbjct: 61  FCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLG 120

Query: 121 GVTRAEGGARRLGTGRLRAEKDAQVMNLGAFISGDLKERDSWRVEGCFGGGAQGLLTGLE 180
           GVTRAEGGARRLGTGRLRAEKDAQVMNLGAFISGDLKERDSWRVEGCFGGGAQGLLTGLE
Sbjct: 121 GVTRAEGGARRLGTGRLRAEKDAQVMNLGAFISGDLKERDSWRVEGCFGGGAQGLLTGLE 180

Query: 181 GRQEGGGFGP------------------------DTTFSSSSLLHCGTVEWLQSLCETCQ 216
           GRQEGGGFGP                        +    + SLLHCGTVEWLQSLCETCQ
Sbjct: 181 GRQEGGGFGPGAGRRRWKGNEHKRRRQEGERLVRERKERTRSLLHCGTVEWLQSLCETCQ 240

Query: 217 VSYHVHRRRVLQEPRNGGVPFPLLEERAGCVEYWSHQGVECQQSLHEWGWAPGVALSGNI 276
           VSYHVHRRRVLQEPRNGGVPFPLLEERAGCVEYWSHQGVECQQSLHEWGWAPGVALSGNI
Sbjct: 241 VSYHVHRRRVLQEPRNGGVPFPLLEERAGCVEYWSHQGVECQQSLHEWGWAPGVALSGNI 300

Query: 277 PALITTGSYGKEWEKYCVQFQLGSIPGSCGQARAPHAQWTRYLSQGHTVCVRSEWPAQDT 336
           PALITTGSYGKEWEKYCVQFQLGSIPGSCGQARAPHAQWTRYLSQGHTVCVRSEWPAQDT
Sbjct: 301 PALITTGSYGKEWEKYCVQFQLGSIPGSCGQARAPHAQWTRYLSQGHTVCVRSEWPAQDT 360

Query: 337 RSRRCYGDGGGAKGNKMWLWQAASHPRCRGTWEKLGQLRHCSCPVVHSLVFI 388
           RSRRCYGDGGGAKGNKMWLWQAASHPRCRGTWEKLGQLRHCSCPVVHSLVFI
Sbjct: 361 RSRRCYGDGGGAKGNKMWLWQAASHPRCRGTWEKLGQLRHCSCPVVHSLVFI 412


>gi|209969800 RPE-spondin [Homo sapiens]
          Length = 264

 Score =  150 bits (378), Expect = 2e-36
 Identities = 79/204 (38%), Positives = 110/204 (53%), Gaps = 31/204 (15%)

Query: 202 CGTVEWL--QSLCETCQVSYHVHRRRVLQEPRNGGVPFPLLEERAGCVEYWSHQGVECQQ 259
           C   EW       + C+ +  V RR V QEP+NGG P P LEERAGC+EY + QG +C  
Sbjct: 75  CFVGEWSPWSGCADQCKPTTRVRRRSVQQEPQNGGAPCPPLEERAGCLEYSTPQGQDCGH 134

Query: 260 SLHEWGWAPGVALSGNIPALITTGSYGKE---------WEK------YCVQFQLGSIPGS 304
           +               +PA ITT ++ KE         W        YC++F+  S+   
Sbjct: 135 TY--------------VPAFITTSAFNKERTRQATSPHWSTHTEDAGYCMEFKTESLTPH 180

Query: 305 CGQARAPHAQWTRYLSQGHTVCVRSEWPAQDTRSRRCYGDGGGAKGNKMWLWQAASHPRC 364
           C     P  +W +YL +G+TVCV  + PA ++ S RC GDG  + GN+   WQA  +PRC
Sbjct: 181 CALENWPLTRWMQYLREGYTVCVDCQPPAMNSVSLRCSGDGLDSDGNQTLHWQAIGNPRC 240

Query: 365 RGTWEKLGQLRHCSCPVVHSLVFI 388
           +GTW+K+ ++  CSCP VHS +FI
Sbjct: 241 QGTWKKVRRVDQCSCPAVHSFIFI 264



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 21/36 (58%), Positives = 21/36 (58%), Gaps = 6/36 (16%)

Query: 37 GSAALGRCCPGRDPMFVARG------PPRCFCDQAC 66
          G A  GRCCPGRDP   ARG         CFCDQAC
Sbjct: 21 GCAEAGRCCPGRDPACFARGWRLDRVYGTCFCDQAC 56


>gi|7710145 methyl-CpG binding domain protein 2 testis-specific
           isoform [Homo sapiens]
          Length = 302

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 38/136 (27%), Positives = 51/136 (37%), Gaps = 28/136 (20%)

Query: 42  GRCCPGRDPMFVARGPPRCFCDQACGAARRGTAAQTIRGSAQVHPGKGKALAER---SER 98
           GRCCP ++             + A G +  G  +   +G      G+G ALA       R
Sbjct: 8   GRCCPEQEEG-----------ESAAGGSGAGGDSAIEQG------GQGSALAPSPVSGVR 50

Query: 99  RGAGAGDERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAEKDAQVMNLGAFISGDLKE 158
           R    G  R +G     G G G   R  G  R  G GR R     +  + G+ + GD   
Sbjct: 51  REGARGGGRGRGRWKQAGRGGGVCGRGRGRGRGRGRGRGRGRGRGRPPSGGSGLGGD--- 107

Query: 159 RDSWRVEGCFGGGAQG 174
                  GC GGG+ G
Sbjct: 108 -----GGGCGGGGSGG 118



 Score = 37.0 bits (84), Expect = 0.030
 Identities = 28/74 (37%), Positives = 30/74 (40%), Gaps = 5/74 (6%)

Query: 67  GAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLGGVTRAE 126
           G   RG   Q  RG      G+G     R   RG G G  R +G    GGSGLGG     
Sbjct: 57  GGRGRGRWKQAGRGGGVCGRGRG-----RGRGRGRGRGRGRGRGRPPSGGSGLGGDGGGC 111

Query: 127 GGARRLGTGRLRAE 140
           GG    G G  R E
Sbjct: 112 GGGGSGGGGAPRRE 125



 Score = 30.4 bits (67), Expect = 2.8
 Identities = 35/108 (32%), Positives = 41/108 (37%), Gaps = 21/108 (19%)

Query: 83  QVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAEKD 142
           + HPG G+   E+ E   A             GGSG GG +  E G    G G   A   
Sbjct: 2   RAHPGGGRCCPEQEEGESAA------------GGSGAGGDSAIEQG----GQGSALAPSP 45

Query: 143 AQ-VMNLGAFISGDLKERDSWRVEGCFGGGAQGLLTGLEGRQEGGGFG 189
              V   GA   G  + R  W+  G  GGG  G   G  GR  G G G
Sbjct: 46  VSGVRREGA--RGGGRGRGRWKQAG-RGGGVCGRGRG-RGRGRGRGRG 89


>gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo
           sapiens]
          Length = 411

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 38/136 (27%), Positives = 51/136 (37%), Gaps = 28/136 (20%)

Query: 42  GRCCPGRDPMFVARGPPRCFCDQACGAARRGTAAQTIRGSAQVHPGKGKALAER---SER 98
           GRCCP ++             + A G +  G  +   +G      G+G ALA       R
Sbjct: 8   GRCCPEQEEG-----------ESAAGGSGAGGDSAIEQG------GQGSALAPSPVSGVR 50

Query: 99  RGAGAGDERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAEKDAQVMNLGAFISGDLKE 158
           R    G  R +G     G G G   R  G  R  G GR R     +  + G+ + GD   
Sbjct: 51  REGARGGGRGRGRWKQAGRGGGVCGRGRGRGRGRGRGRGRGRGRGRPPSGGSGLGGD--- 107

Query: 159 RDSWRVEGCFGGGAQG 174
                  GC GGG+ G
Sbjct: 108 -----GGGCGGGGSGG 118



 Score = 37.0 bits (84), Expect = 0.030
 Identities = 28/74 (37%), Positives = 30/74 (40%), Gaps = 5/74 (6%)

Query: 67  GAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLGGVTRAE 126
           G   RG   Q  RG      G+G     R   RG G G  R +G    GGSGLGG     
Sbjct: 57  GGRGRGRWKQAGRGGGVCGRGRG-----RGRGRGRGRGRGRGRGRPPSGGSGLGGDGGGC 111

Query: 127 GGARRLGTGRLRAE 140
           GG    G G  R E
Sbjct: 112 GGGGSGGGGAPRRE 125



 Score = 30.4 bits (67), Expect = 2.8
 Identities = 35/108 (32%), Positives = 41/108 (37%), Gaps = 21/108 (19%)

Query: 83  QVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAEKD 142
           + HPG G+   E+ E   A             GGSG GG +  E G    G G   A   
Sbjct: 2   RAHPGGGRCCPEQEEGESAA------------GGSGAGGDSAIEQG----GQGSALAPSP 45

Query: 143 AQ-VMNLGAFISGDLKERDSWRVEGCFGGGAQGLLTGLEGRQEGGGFG 189
              V   GA   G  + R  W+  G  GGG  G   G  GR  G G G
Sbjct: 46  VSGVRREGA--RGGGRGRGRWKQAG-RGGGVCGRGRG-RGRGRGRGRG 89


>gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens]
          Length = 462

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 36/102 (35%), Positives = 40/102 (39%), Gaps = 15/102 (14%)

Query: 65  ACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGA-GAGDERRKGAQHLGGSGLGGVT 123
           A GA   G  A      A V P +  A AER  RRGA   G  RR GA+  GG+      
Sbjct: 267 AAGAGENGHCAPP---PADVEPDESSAAAERRRRRGALRRGGRRRAGAE--GGA------ 315

Query: 124 RAEGGARRLGTGRLRAEKDAQVMNLGAFISGDLKERDSWRVE 165
              GGA   G G   AE  A   +      G L    S  VE
Sbjct: 316 ---GGADGQGAGPGAAESGALTASRSPGPGGRLSRASSRSVE 354


>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 13/80 (16%)

Query: 63  DQACGAARRGTAAQTIRGSAQVHPGKGKALAERSE-RRGAGAGDERRKGAQHLGGSGLGG 121
           ++  G AR G AA    G  Q  PG G+  A ++  RRG GA +   +GA+        G
Sbjct: 28  EEVQGLARAGLAA----GKGQRPPGPGRVRAAQARARRGGGARERPAEGAR--------G 75

Query: 122 VTRAEGGARRLGTGRLRAEK 141
              A GGAR     +LRA +
Sbjct: 76  PRAARGGARAGPDAQLRAAR 95


>gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1128

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 20/103 (19%)

Query: 46  PGRDPMFVARGPPRCFCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAG- 104
           PGR P+       R       GA   G  AQ++RG     PG  + +AE +++ G   G 
Sbjct: 450 PGRQPV------GRAAVTGEAGAGAAGRGAQSVRG-----PGVERRVAEGAQQFGPRVGL 498

Query: 105 -------DERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAE 140
                  +  ++ A+  GG G GG   A+   R +G G++R E
Sbjct: 499 RQHAERVERAQRAAEGRGGGG-GGGCGAQAHRRVVGQGQVRWE 540


>gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 801

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 20/103 (19%)

Query: 46  PGRDPMFVARGPPRCFCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAG- 104
           PGR P+       R       GA   G  AQ++RG     PG  + +AE +++ G   G 
Sbjct: 123 PGRQPV------GRAAVTGEAGAGAAGRGAQSVRG-----PGVERRVAEGAQQFGPRVGL 171

Query: 105 -------DERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAE 140
                  +  ++ A+  GG G GG   A+   R +G G++R E
Sbjct: 172 RQHAERVERAQRAAEGRGGGG-GGGCGAQAHRRVVGQGQVRWE 213


>gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 801

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 20/103 (19%)

Query: 46  PGRDPMFVARGPPRCFCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAG- 104
           PGR P+       R       GA   G  AQ++RG     PG  + +AE +++ G   G 
Sbjct: 123 PGRQPV------GRAAVTGEAGAGAAGRGAQSVRG-----PGVERRVAEGAQQFGPRVGL 171

Query: 105 -------DERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAE 140
                  +  ++ A+  GG G GG   A+   R +G G++R E
Sbjct: 172 RQHAERVERAQRAAEGRGGGG-GGGCGAQAHRRVVGQGQVRWE 213


>gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 801

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 20/103 (19%)

Query: 46  PGRDPMFVARGPPRCFCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAG- 104
           PGR P+       R       GA   G  AQ++RG     PG  + +AE +++ G   G 
Sbjct: 123 PGRQPV------GRAAVTGEAGAGAAGRGAQSVRG-----PGVERRVAEGAQQFGPRVGL 171

Query: 105 -------DERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAE 140
                  +  ++ A+  GG G GG   A+   R +G G++R E
Sbjct: 172 RQHAERVERAQRAAEGRGGGG-GGGCGAQAHRRVVGQGQVRWE 213


>gi|40255047 pleckstrin homology domain containing, family H (with
           MyTH4 domain) member 3 [Homo sapiens]
          Length = 793

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 45/152 (29%), Positives = 57/152 (37%), Gaps = 22/152 (14%)

Query: 46  PGRDPMFVARGPPRCFCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAG--A 103
           P  D +     PPR   +       R   +  +   A   PG  K  AER+ R GAG  A
Sbjct: 557 PRLDRLLPPPAPPR---EDPPRPTPRPPPSAALLAGALWSPGLAKRRAERARRGGAGRTA 613

Query: 104 GDERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAEKDAQVMNLGAFISG------DLK 157
           G   R+G     G G G      GG +RL  G  RAE  A  + L A   G      D+ 
Sbjct: 614 GSIAREG-----GGGAGTAAAVLGGWKRL-RGMGRAEAMAAYLALAAQCPGFGAARYDVL 667

Query: 158 ERDSWRVEG-----CFGGGAQGLLTGLEGRQE 184
           E  +    G     C G GA+ +     G  E
Sbjct: 668 ELSTEPGRGAPQKLCLGLGAKAMSLSRPGETE 699


>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
           sapiens]
          Length = 321

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 18/117 (15%)

Query: 40  ALGRCCPGRDP----MFVARGPPRCFCDQACGAARRGTAAQT-IRGSAQVHPGKG-KALA 93
           +LGR C G++P         GP RC    A  +  R   ++   RG     P +G KA  
Sbjct: 101 SLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAAT 160

Query: 94  ERSERRGAGAGDERRK------------GAQHLGGSGLGGVTRAEGGARRLGTGRLR 138
             ++ RG G      K            GA+  GG G         GARR G  +LR
Sbjct: 161 AGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLR 217


>gi|239755342 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 220

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 47/138 (34%), Positives = 56/138 (40%), Gaps = 17/138 (12%)

Query: 5   GVARILSLSLVLAAVA-TGAWERGPLGV--LLPWQGS--AALGRC---CPGRDPMFVARG 56
           GV   L   +    VA TG  ERG LG      W G+    LGR    C  +        
Sbjct: 16  GVTGRLGAGMYRELVAVTGPEERGVLGEPETGAWLGTPEVKLGRGVGPCEDKKGGGAGLR 75

Query: 57  PPRCFCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLG- 115
           PPR     A   A+     + + G     PG  K LA+R +  GAG G     G + LG 
Sbjct: 76  PPRL--SFALLGAKGRKITEVVVGRCPCRPGV-KGLADRLKMLGAGVGAPP-PGWKGLGL 131

Query: 116 ----GSGLGGVTRAEGGA 129
               G GLGG T A GGA
Sbjct: 132 ATGAGKGLGGSTAASGGA 149


>gi|239754599 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 294

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 14/119 (11%)

Query: 37  GSAALGRCCPGRDP----MFVARGPPRCFCDQACGAARRGTAAQT-IRGSAQVHPGKGKA 91
           GS  LGR   G++P     +    P RC C  A  A      ++   RG     P + KA
Sbjct: 93  GSPGLGRL--GKEPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKPRRQKA 150

Query: 92  LAERSERRGAGAGDERRKGAQHLGGSGL-------GGVTRAEGGARRLGTGRLRAEKDA 143
            A +++  G G    RR+     G           GG     GG + +G G  + +K A
Sbjct: 151 AAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGAGAKKPQKAA 209


>gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo
           sapiens]
          Length = 231

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 18/117 (15%)

Query: 40  ALGRCCPGRDP----MFVARGPPRCFCDQACGAARRGTAAQT-IRGSAQVHPGKG-KALA 93
           +LGR C G++P         GP RC    A  +  R   ++   RG     P +G KA  
Sbjct: 101 SLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAAT 160

Query: 94  ERSERRGAGAGDERRK------------GAQHLGGSGLGGVTRAEGGARRLGTGRLR 138
             ++ RG G      K            GA+  GG G         GARR G  +LR
Sbjct: 161 AGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLR 217


>gi|239749829 PREDICTED: hypothetical protein XP_002347170 [Homo
           sapiens]
          Length = 220

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 47/138 (34%), Positives = 56/138 (40%), Gaps = 17/138 (12%)

Query: 5   GVARILSLSLVLAAVA-TGAWERGPLGV--LLPWQGS--AALGRC---CPGRDPMFVARG 56
           GV   L   +    VA TG  ERG LG      W G+    LGR    C  +        
Sbjct: 16  GVTGRLGAGMYRELVAVTGPEERGVLGEPETGAWLGTPEVKLGRGVGPCEDKKGGGAGLR 75

Query: 57  PPRCFCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLG- 115
           PPR     A   A+     + + G     PG  K LA+R +  GAG G     G + LG 
Sbjct: 76  PPRL--SFALLGAKGRKITEVVVGRCPCRPGV-KGLADRLKMLGAGVGAPP-PGWKGLGL 131

Query: 116 ----GSGLGGVTRAEGGA 129
               G GLGG T A GGA
Sbjct: 132 ATGAGKGLGGSTAASGGA 149


>gi|239744119 PREDICTED: hypothetical protein XP_002343063 [Homo
           sapiens]
          Length = 220

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 47/138 (34%), Positives = 56/138 (40%), Gaps = 17/138 (12%)

Query: 5   GVARILSLSLVLAAVA-TGAWERGPLGV--LLPWQGS--AALGRC---CPGRDPMFVARG 56
           GV   L   +    VA TG  ERG LG      W G+    LGR    C  +        
Sbjct: 16  GVTGRLGAGMYRELVAVTGPEERGVLGEPETGAWLGTPEVKLGRGVGPCEDKKGGGAGLR 75

Query: 57  PPRCFCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLG- 115
           PPR     A   A+     + + G     PG  K LA+R +  GAG G     G + LG 
Sbjct: 76  PPRL--SFALLGAKGRKITEVVVGRCPCRPGV-KGLADRLKMLGAGVGAPP-PGWKGLGL 131

Query: 116 ----GSGLGGVTRAEGGA 129
               G GLGG T A GGA
Sbjct: 132 ATGAGKGLGGSTAASGGA 149


>gi|10863889 squamous cell carcinoma antigen recognized by T cells 1
           [Homo sapiens]
          Length = 800

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 72  GTAAQTIRGSAQVHPGKGKALAERSERRGA--GAGDERRKGAQHLGGSGLGGVTRAEGGA 129
           GT A    G A   P + +   +   R G   G+G ERRK ++  GG    G   AE  A
Sbjct: 15  GTTAAAGTGGATEQPPRHREHKKHKHRSGGSGGSGGERRKRSRERGGERGSGRRGAEAEA 74

Query: 130 RRLGTGRLRAEKD 142
           R    GR R++ +
Sbjct: 75  RSSTHGRERSQAE 87


>gi|61743975 SORCS receptor 1 isoform b [Homo sapiens]
          Length = 1198

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 34/126 (26%), Positives = 41/126 (32%), Gaps = 11/126 (8%)

Query: 16  LAAVATGAWERGPLGVLLPWQGSAAL--------GRCCPGRDPMFVARGP--PRCFCDQA 65
           +  V  G   +  L  LL   G   L        G CCP   P    R    PR F  Q 
Sbjct: 1   MGKVGAGGGSQARLSALLAGAGLLILCAPGVCGGGSCCPSPHPSSAPRSASTPRGFSHQG 60

Query: 66  C-GAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLGGVTR 124
             G A        +R    V PG      ER+   GA      R G +   G+      R
Sbjct: 61  RPGRAPATPLPLVVRPLFSVAPGDRALSLERARGTGASMAVAARSGRRRRSGADQEKAER 120

Query: 125 AEGGAR 130
            EG +R
Sbjct: 121 GEGASR 126


>gi|61743973 SORCS receptor 1 isoform a [Homo sapiens]
          Length = 1168

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 34/126 (26%), Positives = 41/126 (32%), Gaps = 11/126 (8%)

Query: 16  LAAVATGAWERGPLGVLLPWQGSAAL--------GRCCPGRDPMFVARGP--PRCFCDQA 65
           +  V  G   +  L  LL   G   L        G CCP   P    R    PR F  Q 
Sbjct: 1   MGKVGAGGGSQARLSALLAGAGLLILCAPGVCGGGSCCPSPHPSSAPRSASTPRGFSHQG 60

Query: 66  C-GAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLGGVTR 124
             G A        +R    V PG      ER+   GA      R G +   G+      R
Sbjct: 61  RPGRAPATPLPLVVRPLFSVAPGDRALSLERARGTGASMAVAARSGRRRRSGADQEKAER 120

Query: 125 AEGGAR 130
            EG +R
Sbjct: 121 GEGASR 126


>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 465

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 29/114 (25%), Positives = 41/114 (35%), Gaps = 19/114 (16%)

Query: 42  GRCCPGRDP----MFVARGPPRCFCDQACGAARR----------GTAAQTIRGSAQV--- 84
           GR C G++P     +    P RC    A  +  R          G   Q  R  A V   
Sbjct: 103 GRGCLGKEPPSQESWTRSDPRRCLSQDAVRSGSRVCRSRPQTRGGGGKQPRRQKAAVAGA 162

Query: 85  --HPGKGKALAERSERRGAGAGDERRKGAQHLGGSGLGGVTRAEGGARRLGTGR 136
               G+GK    R ++        R  G + LGG  +    +   GA+R G G+
Sbjct: 163 KSRGGEGKKPQRRGQKAATAGAKSRGGGVRSLGGKKMRRGQKGAAGAKRCGGGK 216


>gi|9966841 cell death regulator aven [Homo sapiens]
          Length = 362

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 36/100 (36%), Positives = 44/100 (44%), Gaps = 17/100 (17%)

Query: 74  AAQTIRGSAQVHPGKGKALAER-SERRGAGAGDERRKGAQHLGGSGLGGVTRAEGGARRL 132
           A +  RG     PG+G+   +R SER GA A   R       GG G GG    +GG RR 
Sbjct: 3   AERGARGGRGRRPGRGRPGGDRHSERPGAAAAVAR-------GGGGGGG---GDGGGRR- 51

Query: 133 GTGRLRAEKDAQVMNLGAFISGDLKERDSWRVEGCFGGGA 172
           G GR R  + A+         G    R S R  G +G GA
Sbjct: 52  GRGRGRGFRGAR-----GGRGGGGAPRGSRREPGGWGAGA 86


>gi|222446611 R-spondin family, member 2 [Homo sapiens]
          Length = 243

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 9/67 (13%)

Query: 209 QSLCETCQVSYHVHRRRVLQEPRNGGVPFPLLEERAGCVE-----YWSHQGVECQQSLHE 263
           +  C  C+V +++HR R   E  +G  P   LEE   CVE     +WS  G  C ++   
Sbjct: 107 KDFCTKCKVGFYLHRGRCFDECPDGFAP---LEETMECVEGCEVGHWSEWGT-CSRNNRT 162

Query: 264 WGWAPGV 270
            G+  G+
Sbjct: 163 CGFKWGL 169


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 6/106 (5%)

Query: 37  GSAALGRCCPGRDPMFVARGPPRCFCDQACGAARRGTAAQTIRGSAQVHPGKG-KALAER 95
           G + +G+   G D     +G          GA RRG A    + +A+   G+G K+L  +
Sbjct: 259 GKSRVGKSRGGGDKKLRRQGQNAALA----GAKRRGAATAGEKPAAKGRGGRGPKSLGGQ 314

Query: 96  SERRGAGAGDERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAEK 141
           + R G G    RR+G Q    +   G  R  GG ++     +++ K
Sbjct: 315 NPRWGRGGKKPRRRG-QKATKAAAAGTKRGGGGQQKAAVVGVKSRK 359



 Score = 29.6 bits (65), Expect = 4.8
 Identities = 42/161 (26%), Positives = 59/161 (36%), Gaps = 38/161 (23%)

Query: 18  AVATGAWERGPLGVLLPWQGSAALGRCCPGRDPMFVARGPPRCFCDQACGAARRGTAAQT 77
           A ATGA  RG  G    WQ  AA G                     ++  AA  G  A+ 
Sbjct: 646 AWATGATSRGSGGKQPRWQKPAAAG--------------------SESSAAAAVGQEAE- 684

Query: 78  IRGSAQVHPGKGKALAERSERRGAGAGD---ERRKGAQHLGGS--GLGGVTRAEGGARRL 132
               A+  P + +A +     + A  G    +RR     LG S  G G  +R  GGA+  
Sbjct: 685 ----ARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSR 740

Query: 133 GTGRLRAEKDAQVMNLGAFISGDLKERDSWRVEGCFGGGAQ 173
           G+G  ++    +     +   G  K R         GGGA+
Sbjct: 741 GSGGAKSRSGKKAAASKSHGGGGAKRRR--------GGGAK 773



 Score = 29.6 bits (65), Expect = 4.8
 Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 3/68 (4%)

Query: 67  GAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGDERRKGAQHLGGS---GLGGVT 123
           GA  RG+     RGS       GK  A      G GA   R  GA+   G      GG  
Sbjct: 728 GAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQK 787

Query: 124 RAEGGARR 131
            A  G ++
Sbjct: 788 AAAAGGKK 795


>gi|239756562 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 45/173 (26%), Positives = 58/173 (33%), Gaps = 37/173 (21%)

Query: 38  SAALGRCCPGRDPMFVARGPPRC-----FCDQACGAARRGTAAQTIRGSAQVHPGKGKAL 92
           +AA     PGR    V +GPP          Q C +   G A   +  S     G  KA 
Sbjct: 87  AAAAKAGSPGRRR--VGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAA 144

Query: 93  AERSERRGAGAGDERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAEKDAQVMNLGAFI 152
           A  ++RRG G  + RR+     G    GG +  +         R R +K A   N G   
Sbjct: 145 ASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKK--------PRRRGQKAAPAKNSG--- 193

Query: 153 SGDLKERDSWRVEGCFGGG---AQGLLTGLEGRQEGGGFGPDTTFSSSSLLHC 202
                           GGG    +    G + R  GGG  P        LL C
Sbjct: 194 ----------------GGGNKPQKAAAAGAKNRGGGGGKKPRRGRRLLGLLPC 230


>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 449

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 42/161 (26%), Positives = 59/161 (36%), Gaps = 45/161 (27%)

Query: 60  CFCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGD--ERRKGAQHLGGS 117
           C C   CG     + +  +RG A+  P +GK +      RG G G   + R G  H   S
Sbjct: 33  CCC---CGRRSLPSVSGPVRGRAERRPARGKHV------RGGGVGGCRDSRAGGSHAAPS 83

Query: 118 GLGGVTRAE--------------------GGARRLGTGRLRA-----EKDAQVMNLGAFI 152
           GLG    +E                    G A R G     +        ++V    +  
Sbjct: 84  GLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPSSR 143

Query: 153 SGDLKERDSWRVE--------GCFGGGAQGLLTGLEGRQEG 185
            G  K R+SWR +        GC  G A+G    L+ R+EG
Sbjct: 144 RGASKRRESWRTDGERLRSGRGC-AGAARGPDASLDTRREG 183


>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 13/80 (16%)

Query: 63  DQACGAARRGTAAQTIRGSAQVHPGKGKALAERSE-RRGAGAGDERRKGAQHLGGSGLGG 121
           ++  G AR G A     G  Q  PG G+  A ++  RRG GA +   +GA+        G
Sbjct: 28  EEVQGLARAGLAT----GKGQRPPGPGRVRAAQARARRGGGARERPAEGAR--------G 75

Query: 122 VTRAEGGARRLGTGRLRAEK 141
              A GGAR     +LRA +
Sbjct: 76  PRAARGGARAGPDAQLRAAR 95


>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
           sapiens]
          Length = 402

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 42/161 (26%), Positives = 59/161 (36%), Gaps = 45/161 (27%)

Query: 60  CFCDQACGAARRGTAAQTIRGSAQVHPGKGKALAERSERRGAGAGD--ERRKGAQHLGGS 117
           C C   CG     + +  +RG A+  P +GK +      RG G G   + R G  H   S
Sbjct: 33  CCC---CGRRSLPSVSGPVRGRAERRPARGKHV------RGGGVGGCRDSRAGGSHAAPS 83

Query: 118 GLGGVTRAE--------------------GGARRLGTGRLRA-----EKDAQVMNLGAFI 152
           GLG    +E                    G A R G     +        ++V    +  
Sbjct: 84  GLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPSSR 143

Query: 153 SGDLKERDSWRVE--------GCFGGGAQGLLTGLEGRQEG 185
            G  K R+SWR +        GC  G A+G    L+ R+EG
Sbjct: 144 RGASKRRESWRTDGERLRSGRGC-AGAARGPDASLDTRREG 183


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,862,184
Number of Sequences: 37866
Number of extensions: 932565
Number of successful extensions: 3042
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 2871
Number of HSP's gapped (non-prelim): 216
length of query: 388
length of database: 18,247,518
effective HSP length: 104
effective length of query: 284
effective length of database: 14,309,454
effective search space: 4063884936
effective search space used: 4063884936
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press