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Search of human proteins with 169211642
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169211642 PREDICTED: hypothetical protein [Homo sapiens]
(378 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169211642 PREDICTED: hypothetical protein [Homo sapiens] 758 0.0
gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo s... 758 0.0
gi|239756693 PREDICTED: similar to coiled-coil domain containing... 402 e-112
gi|13376725 coiled-coil domain containing 92 [Homo sapiens] 96 7e-20
gi|13994287 BTE-binding protein 4 [Homo sapiens] 54 3e-07
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 52 1e-06
gi|154146199 sal-like 3 [Homo sapiens] 49 6e-06
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 47 2e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 47 3e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 45 8e-05
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 45 1e-04
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 45 1e-04
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 45 1e-04
gi|157785645 SPEG complex locus [Homo sapiens] 45 1e-04
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens] 44 2e-04
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 44 2e-04
gi|59853099 dynamin 1 isoform 1 [Homo sapiens] 44 2e-04
gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens] 44 2e-04
gi|115527070 alpha 2 type VI collagen isoform 2C2a' precursor [H... 44 2e-04
gi|115527066 alpha 2 type VI collagen isoform 2C2a precursor [Ho... 44 2e-04
gi|115527062 alpha 2 type VI collagen isoform 2C2 precursor [Hom... 44 2e-04
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 44 2e-04
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|178557734 microtubule-associated protein tau isoform 6 [Homo ... 43 4e-04
gi|242332545 coiled-coil domain containing 121-like [Homo sapiens] 43 4e-04
gi|169167297 PREDICTED: similar to hCG18094 [Homo sapiens] 43 4e-04
>gi|169211642 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 758 bits (1956), Expect = 0.0
Identities = 378/378 (100%), Positives = 378/378 (100%)
Query: 1 MDTVSLEHQIQSVQRHISFLKKEQMALLRDLHLEILRLQKRCSGHGPDPKMWSRQEQSAL 60
MDTVSLEHQIQSVQRHISFLKKEQMALLRDLHLEILRLQKRCSGHGPDPKMWSRQEQSAL
Sbjct: 1 MDTVSLEHQIQSVQRHISFLKKEQMALLRDLHLEILRLQKRCSGHGPDPKMWSRQEQSAL 60
Query: 61 THAMLLRWRRHLWQSPGSLEEPVRAVRRRGRGVTRPLKALLGGGPRDVPPSFPNPRFTPP 120
THAMLLRWRRHLWQSPGSLEEPVRAVRRRGRGVTRPLKALLGGGPRDVPPSFPNPRFTPP
Sbjct: 61 THAMLLRWRRHLWQSPGSLEEPVRAVRRRGRGVTRPLKALLGGGPRDVPPSFPNPRFTPP 120
Query: 121 PRGHQTVSLQVYTELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRRE 180
PRGHQTVSLQVYTELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRRE
Sbjct: 121 PRGHQTVSLQVYTELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRRE 180
Query: 181 VAQREALVSALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQR 240
VAQREALVSALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQR
Sbjct: 181 VAQREALVSALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQR 240
Query: 241 LQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAA 300
LQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAA
Sbjct: 241 LQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAA 300
Query: 301 RSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGH 360
RSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGH
Sbjct: 301 RSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGH 360
Query: 361 LLYREDSPSRSWPGPTCL 378
LLYREDSPSRSWPGPTCL
Sbjct: 361 LLYREDSPSRSWPGPTCL 378
>gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo
sapiens]
Length = 378
Score = 758 bits (1956), Expect = 0.0
Identities = 378/378 (100%), Positives = 378/378 (100%)
Query: 1 MDTVSLEHQIQSVQRHISFLKKEQMALLRDLHLEILRLQKRCSGHGPDPKMWSRQEQSAL 60
MDTVSLEHQIQSVQRHISFLKKEQMALLRDLHLEILRLQKRCSGHGPDPKMWSRQEQSAL
Sbjct: 1 MDTVSLEHQIQSVQRHISFLKKEQMALLRDLHLEILRLQKRCSGHGPDPKMWSRQEQSAL 60
Query: 61 THAMLLRWRRHLWQSPGSLEEPVRAVRRRGRGVTRPLKALLGGGPRDVPPSFPNPRFTPP 120
THAMLLRWRRHLWQSPGSLEEPVRAVRRRGRGVTRPLKALLGGGPRDVPPSFPNPRFTPP
Sbjct: 61 THAMLLRWRRHLWQSPGSLEEPVRAVRRRGRGVTRPLKALLGGGPRDVPPSFPNPRFTPP 120
Query: 121 PRGHQTVSLQVYTELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRRE 180
PRGHQTVSLQVYTELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRRE
Sbjct: 121 PRGHQTVSLQVYTELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRRE 180
Query: 181 VAQREALVSALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQR 240
VAQREALVSALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQR
Sbjct: 181 VAQREALVSALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQR 240
Query: 241 LQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAA 300
LQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAA
Sbjct: 241 LQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAA 300
Query: 301 RSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGH 360
RSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGH
Sbjct: 301 RSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGH 360
Query: 361 LLYREDSPSRSWPGPTCL 378
LLYREDSPSRSWPGPTCL
Sbjct: 361 LLYREDSPSRSWPGPTCL 378
>gi|239756693 PREDICTED: similar to coiled-coil domain containing 92
[Homo sapiens]
Length = 272
Score = 402 bits (1033), Expect = e-112
Identities = 212/240 (88%), Positives = 214/240 (89%), Gaps = 18/240 (7%)
Query: 139 LEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRREVAQREALVSALRCSLRTE 198
LE+ Q EAASRELESKCRALESQLEARAAANAELRREVAQREALVSALRCSLRTE
Sbjct: 51 LEILRLQKRCSEAASRELESKCRALESQLEARAAANAELRREVAQREALVSALRCSLRTE 110
Query: 199 ERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAAAQRPQPAPAASPG 258
ERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQA P+P PA
Sbjct: 111 ERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQA-----PRPGPA---- 161
Query: 259 APGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGSEGSRPSSRK 318
RAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGSEGSRPSSRK
Sbjct: 162 ---------RAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGSEGSRPSSRK 212
Query: 319 RGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGHLLYREDSPSRSWPGPTCL 378
RGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGHLLYREDSPSRSWPGPTCL
Sbjct: 213 RGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGHLLYREDSPSRSWPGPTCL 272
Score = 86.7 bits (213), Expect = 3e-17
Identities = 43/43 (100%), Positives = 43/43 (100%)
Query: 1 MDTVSLEHQIQSVQRHISFLKKEQMALLRDLHLEILRLQKRCS 43
MDTVSLEHQIQSVQRHISFLKKEQMALLRDLHLEILRLQKRCS
Sbjct: 19 MDTVSLEHQIQSVQRHISFLKKEQMALLRDLHLEILRLQKRCS 61
>gi|13376725 coiled-coil domain containing 92 [Homo sapiens]
Length = 331
Score = 95.5 bits (236), Expect = 7e-20
Identities = 47/148 (31%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Query: 133 TELTHDLEMREA-QSHQQEAASRELESKCRALESQLEARAAANAELRREVAQREALVSAL 191
T+LT++L ++ + Q+ + S EL+ +C LE+QL+ + NAEL +E+ Q+ A+++ L
Sbjct: 60 TDLTYELTVKSSEQTGDGTSKSSELKKRCEELEAQLKVKENENAELLKELEQKNAMITVL 119
Query: 192 RCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAAA---QR 248
+++ E+++LEEL+ +SH+ T+L +EL++ AYL+ QLHAA+++L +++
Sbjct: 120 ENTIKEREKKYLEELKAKSHKLTLLSSELEQRASTIAYLTSQLHAAKKKLMSSSGTSDAS 179
Query: 249 PQPAPAASPGAPGPSRPAARAQPAQRAR 276
P +P + P P + P +R +
Sbjct: 180 PSGSPVLASYKPAPPKDKLPETPRRRMK 207
Score = 42.0 bits (97), Expect = 0.001
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 1 MDTVSLEHQIQSVQRHISFLKKEQMALLRDLHLEILRLQKRCS 43
M +LE+Q+ S Q+++ FL++E + L+ LH EI RLQ+ C+
Sbjct: 18 MAATNLENQLHSAQKNLLFLQREHASTLKGLHSEIRRLQQHCT 60
>gi|13994287 BTE-binding protein 4 [Homo sapiens]
Length = 252
Score = 53.5 bits (127), Expect = 3e-07
Identities = 41/107 (38%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Query: 241 LQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGAR----LAGVTRDGRGGPA 296
L AA+R AASPG PGP P PA GPG A A + D RGGP
Sbjct: 41 LDVRAARRE----AASPGTPGPPPPP----PAASGPGPGAAAAPHLLAASILADLRGGPG 92
Query: 297 RDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKA 343
+ A S S PSS + AAP+ +R PF PD +KA
Sbjct: 93 AAPGGASPASSSSAASSPSSGRAPGAAPSAAAKSHRCPF--PDCAKA 137
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 51.6 bits (122), Expect = 1e-06
Identities = 64/238 (26%), Positives = 94/238 (39%), Gaps = 23/238 (9%)
Query: 133 TELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRREVAQREALVSALR 192
T L +L + + E A +E + L +L A+ +R+E+ + +
Sbjct: 1297 TRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQE 1356
Query: 193 CSLRTEERRFLEEL-------RRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAA 245
RT ERR L L +++ A L +L+ AA L +L AA R Q
Sbjct: 1357 GEFRTRERRLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELGLRLSAAEGRAQGLE 1416
Query: 246 AQ--RPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSP 303
A+ R + A+ G R A R RG G+G + R G PARDA P
Sbjct: 1417 AELARVEVQRRAAEAQLGGLRSALR-------RGLGLGRAPSPAPRPVPGSPARDA---P 1466
Query: 304 QAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREF---LRGAER 358
G G + PS+ + + P P P PD+ + REF LR A+R
Sbjct: 1467 AEGSGEGLNSPSTLECSPGSQPPSPGPATSP-ASPDLDPEAVRGALREFLQELRSAQR 1523
Score = 51.2 bits (121), Expect = 1e-06
Identities = 67/249 (26%), Positives = 98/249 (39%), Gaps = 38/249 (15%)
Query: 134 ELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRREVAQREALVSALRC 193
EL ++M ++++ + EL+ + E + LR+ + + EA + +R
Sbjct: 1284 ELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQ 1343
Query: 194 SLRTEERRFLE---ELRRRSHRAT-----VLGTELQKHTEAAAYLSCQLHAARQRLQAAA 245
L+ +R+ E E R R R GTE Q+ A L +L AAR A A
Sbjct: 1344 ELQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQQLDHARG-LELKLEAAR----AEA 1398
Query: 246 AQRPQPAPAASPGAPGPSRPAARAQPAQRA-------------RGPGVGARLAGVTRDGR 292
A+ AA A G AR + +RA RG G+G + R
Sbjct: 1399 AELGLRLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLRSALRRGLGLGRAPSPAPRPVP 1458
Query: 293 GGPARDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREF 352
G PARDA P G G + PS+ + + P P P +SP L E
Sbjct: 1459 GSPARDA---PAEGSGEGLNSPSTLECSPGSQPPSPGPATSP---------ASPDLDPEA 1506
Query: 353 LRGAERGHL 361
+RGA R L
Sbjct: 1507 VRGALREFL 1515
Score = 34.3 bits (77), Expect = 0.19
Identities = 48/186 (25%), Positives = 68/186 (36%), Gaps = 42/186 (22%)
Query: 138 DLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRREVAQREALVSALR----- 192
+LE+ + +EA+ ++ SK AL L A +L R VAQ E SAL+
Sbjct: 719 ELELSMTKLRAEEASLQDSLSKLSALNESL---AQDKLDLNRLVAQLEEEKSALQGRQRQ 775
Query: 193 ----CSLRTEERRFLEELRRRSHRA----------------------TVLGTELQKHTEA 226
++ EE+ LEELR A L E + E
Sbjct: 776 AEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQ 835
Query: 227 AAYLSCQLHAARQRLQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAG 286
A LS QL Q L+ A + + A AAR + A G+ +L
Sbjct: 836 LAQLSRQLSGREQELEQARREAQRQVEAL--------ERAAREKEALAKEHAGLAVQLVA 887
Query: 287 VTRDGR 292
R+GR
Sbjct: 888 AEREGR 893
Score = 33.9 bits (76), Expect = 0.25
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 5/122 (4%)
Query: 122 RGHQTVSLQVYTELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRREV 181
+G Q + Q T + E E +QE A + LE R E EA LR E
Sbjct: 770 QGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHER 829
Query: 182 AQREALVSALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAY----LSCQLHAA 237
+Q + ++ L L E+ LE+ RR + R + EA A L+ QL AA
Sbjct: 830 SQLQEQLAQLSRQLSGREQE-LEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAA 888
Query: 238 RQ 239
+
Sbjct: 889 ER 890
Score = 30.8 bits (68), Expect = 2.1
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 14/164 (8%)
Query: 137 HDLEMREAQSHQQEAASRELESKCRALESQLEAR--------AAANAELRREVAQREALV 188
H+ +++ Q ++EAA RELE++ L+SQL+ A EL E+A AL
Sbjct: 991 HEEDLQRLQ-REKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIA---ALQ 1046
Query: 189 SALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAAAQR 248
L E + L + T L +L + A +S ++ ++ Q+ Q
Sbjct: 1047 QERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQD 1106
Query: 249 PQPAPAASPGAPG--PSRPAARAQPAQRARGPGVGARLAGVTRD 290
A + R A A AQ R AR G RD
Sbjct: 1107 RSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRD 1150
Score = 30.4 bits (67), Expect = 2.7
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 126 TVSLQVYTELTHDLEMREAQSHQQEAAS--RELESKCRALESQLEARAAANAELRREVAQ 183
T+SL++ + + R+AQS Q++ S L S+ R L +Q E AAA+A+ R + +
Sbjct: 1087 TISLEM------ERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQE 1140
Query: 184 REALVSALRCSLRTEERRFLEELR 207
+ + R S E +LR
Sbjct: 1141 QARDLGKQRDSCLREAEELRTQLR 1164
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 49.3 bits (116), Expect = 6e-06
Identities = 43/132 (32%), Positives = 49/132 (37%), Gaps = 13/132 (9%)
Query: 240 RLQAAAAQRPQPAPAASPGA-PGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARD 298
R Q A QRP P P+ SP A P PA P A GA A + G PA
Sbjct: 227 RSQVALMQRPPPRPSLSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAF 286
Query: 299 AARSPQAGPGSEGSRPS-----------SRKRGEAAPAPPKSPNRQPFVLPDVSKASSPL 347
P + P S S P S AAPAP +P P S ++ P
Sbjct: 287 EGAQPLSRPESGASTPGGPAEPSAPAAPSAAPAPAAPAPAPAPQSAASSQPQ-SASTPPA 345
Query: 348 LAREFLRGAERG 359
LA L GA G
Sbjct: 346 LAPGSLLGAAPG 357
Score = 30.4 bits (67), Expect = 2.7
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 249 PQPAPAASPGAPGPSRPA---------ARAQPAQRARGPGVGARLAGVTRDGRGGPARDA 299
P+P+PA+SP S A A+P ++ P + A AG TR R PA A
Sbjct: 95 PEPSPASSPSERAESEAAEEAGAEGAEGEARPVEKEAEP-MDAEPAGDTRAPRPPPAAPA 153
Query: 300 ARSPQAGPGS 309
+P G S
Sbjct: 154 PPTPAYGAPS 163
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 47.4 bits (111), Expect = 2e-05
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 143 EAQSHQQ-------EAASRELESKCRALESQLEARAAANAELR-------REVAQREALV 188
EAQ+ +Q EAA +ELES + E+ +EA AAA E R R AQ EA
Sbjct: 784 EAQAWEQARLREAVEAAGQELESASQEREALVEALAAAGRERRQWEREGSRLRAQSEAAE 843
Query: 189 SALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAAAQR 248
++ L +E R+ LEE R L EL+K L +L ++ L+ AA +R
Sbjct: 844 ERMQV-LESEGRQHLEEAERERREKEALQAELEKAVVRGKELGARLEHLQRELEQAALER 902
Query: 249 PQ 250
+
Sbjct: 903 QE 904
Score = 37.4 bits (85), Expect = 0.022
Identities = 90/366 (24%), Positives = 126/366 (34%), Gaps = 65/366 (17%)
Query: 47 PDPKMWSRQEQSALTHAMLL---RWRRHLWQSPGSLEEPVRAVRRRGRGVTRPLKALLGG 103
P WS QE + RR QSP S+ P +G G LLGG
Sbjct: 569 PQASDWSPQESGSPVETQESPEKAGRRSSLQSPASVAPP------QGPGTKIQAPQLLGG 622
Query: 104 GPRD--------VPPSF----PNPRFTPPPRGHQTVSLQVYTELTHDLEMREAQSHQQEA 151
VP ++ P P P +V L+ L++ Q+ +E
Sbjct: 623 ETEGREAPQGELVPEAWGLRQEGPEHKPGPSEPSSVQLEEQEGPNQGLDLATGQAEAREH 682
Query: 152 ASRELESKCR-------------ALESQL-------EARAAANAE---LRREVAQ----R 184
R LE R ALE Q+ E+ A+ AE LR EVAQ
Sbjct: 683 DQR-LEGTVRDPAWQKPQQKSEGALEVQVWEGPIPGESLASGVAEQEALREEVAQLRRKA 741
Query: 185 EALVSALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAY------LSCQLHAAR 238
EAL L R E + E R A E + H EA A L + AA
Sbjct: 742 EALGDELEAQARKLEAQNTEAARLSKELAQARRAEAEAHREAEAQAWEQARLREAVEAAG 801
Query: 239 QRLQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARD 298
Q L++A+ +R + A A R R RA+ R+ + +GR +
Sbjct: 802 QELESASQER-EALVEALAAAGRERRQWEREGSRLRAQSEAAEERMQVLESEGR-QHLEE 859
Query: 299 AARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAER 358
A R + + + RG+ A + R+ + L +EFLR E
Sbjct: 860 AERERREKEALQAELEKAVVRGKELGARLEHLQRE--------LEQAALERQEFLREKES 911
Query: 359 GHLLYR 364
H Y+
Sbjct: 912 QHQRYQ 917
Score = 35.0 bits (79), Expect = 0.11
Identities = 46/197 (23%), Positives = 70/197 (35%), Gaps = 24/197 (12%)
Query: 139 LEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRREVAQREALVSALRCSLRTE 198
LE+ AQ Q RE + +L + +LR + + A +L E
Sbjct: 1196 LELERAQLEMQSQQLRESNQQLDLSACRLTTQCELLTQLRSAQEEENRQLLAEVQALSRE 1255
Query: 199 ERRFLE-ELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAAAQ--------RP 249
R LE L R H H E YL QL+A R+ Q + P
Sbjct: 1256 NRELLERSLESRDH----------LHREQREYLD-QLNALRREKQKLVEKIMDQYRVLEP 1304
Query: 250 QPAPAASPGAPGPSRPAARAQPAQRARGPG---VGARLAGVTRDGRGGPARDAARSPQAG 306
P P G+ + +P + PG +GA AG T + GGP +
Sbjct: 1305 VPLPRTKKGSWLADKVKRLMRPRREGGPPGGLRLGADGAGST-ESLGGPPETELPEGREA 1363
Query: 307 PGSEGSRPSSRKRGEAA 323
G+ P+ +R +++
Sbjct: 1364 DGTGSPSPAPMRRAQSS 1380
Score = 32.3 bits (72), Expect = 0.72
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 143 EAQSHQQEAASRELESKCRALESQLEARAAANAELRREVAQREALVSALRCSLRTEERRF 202
E SH +++ R L +LE +A + + EV EA + LR +E +
Sbjct: 250 EGPSHHLALQLANAKAQLRRLRQELEEKAELLLDSQAEVQGLEAEIRRLR-----QEAQA 304
Query: 203 LEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAAAQRPQ 250
L +R+ L++ L +L R+RLQAA A + Q
Sbjct: 305 LSGQAKRAELYREEAEALRERAGRLPRLQEELRRCRERLQAAEAYKSQ 352
Score = 30.8 bits (68), Expect = 2.1
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 17/127 (13%)
Query: 122 RGHQTVSLQVYTELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRREV 181
RG Q L+ + L +EA+ R+L++ RALE RE+
Sbjct: 1068 RGQQQALLRDHKALAQLQRRQEAELEGLLVRHRDLKANMRALEL-----------AHREL 1116
Query: 182 AQREALVSALRCSLRTEERRFL---EELRRRSHRATVLGTE---LQKHTEAAAYLSCQLH 235
R + A R S+ +E L E L + HR L E LQ + A L +L
Sbjct: 1117 QGRHEQLQAQRASVEAQEVALLAERERLMQDGHRQRGLEEELRRLQSEHDRAQMLLAELS 1176
Query: 236 AARQRLQ 242
R LQ
Sbjct: 1177 RERGELQ 1183
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 47.0 bits (110), Expect = 3e-05
Identities = 38/119 (31%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 251 PAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARS----PQAG 306
P+P SPG P P A PA P L T +GGP +++ P A
Sbjct: 1318 PSPKGSPGTPPPK--GAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAAT 1375
Query: 307 PGSEGS---RPSSRKRGEAAPAPPKSPNRQPFVLP-DVSKASSPLLAREFLRGAERGHL 361
P +G P S KRG A P+P P P V+P KA + + RE +G L
Sbjct: 1376 PSHKGGPAMTPPSPKRGPAIPSPKGDPT-SPAVIPLSPKKAPATPVTREGAATPSKGDL 1433
Score = 41.2 bits (95), Expect = 0.002
Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 26/110 (23%)
Query: 249 PQPAPAASPGAP--GPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAG 306
P P PAA+P +P GP+ P+ + P A P +GGPA SP+
Sbjct: 940 PTP-PAATPPSPKGGPATPSPKWAPTPPAATPP----------SPKGGPATP---SPKGA 985
Query: 307 PGSEGSRPSSRKRGEAAPAP----------PKSPNRQPFVLPDVSKASSP 346
P + P S K G A P+P P SP P P AS+P
Sbjct: 986 PTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTP 1035
Score = 37.4 bits (85), Expect = 0.022
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 243 AAAAQRPQPAPAASPGAPGPSRPAA------RAQPAQRARGPGVGARLAGVTRDGRGGPA 296
A P+ +PAA+P G S P A + PA G A +GGPA
Sbjct: 1013 AVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPA 1072
Query: 297 RDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSP 330
S + P + P S K G A P+P +P
Sbjct: 1073 TP---SLKGAPTPPAATPPSPKGGPATPSPKGAP 1103
Score = 37.4 bits (85), Expect = 0.022
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 253 PAASPGAP--GPSRPAARAQPAQ-RARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGS 309
PAA+P +P GP+ P + P A P + LA G PA SP+ GP +
Sbjct: 1244 PAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPAT 1303
Query: 310 EGSRPSSRKRGEAAPAPPKSPNRQP 334
+ + P+P SP P
Sbjct: 1304 SPPKGAPTPPAATPPSPKGSPGTPP 1328
Score = 37.0 bits (84), Expect = 0.029
Identities = 31/98 (31%), Positives = 39/98 (39%), Gaps = 16/98 (16%)
Query: 249 PQPAPAASPGAP--GPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAG 306
P P PAA+P +P GP+ P+ + P A P +GGPA SP+
Sbjct: 963 PTP-PAATPPSPKGGPATPSPKGAPTPPAATPP----------SPKGGPATP---SPKGA 1008
Query: 307 PGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKAS 344
P P S K AA PK + P P K S
Sbjct: 1009 PTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGS 1046
Score = 35.4 bits (80), Expect = 0.085
Identities = 34/111 (30%), Positives = 41/111 (36%), Gaps = 8/111 (7%)
Query: 243 AAAAQRPQPAPAASPGAPGPSRPAARAQPAQ--RARGPGVGARLAGVTR--DGRGGPARD 298
AA P+ PA P P+ PAA + A P GA V +GGP
Sbjct: 1245 AATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGP--- 1301
Query: 299 AARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLA 349
A P+ P + P S K P PPK P V P K + L A
Sbjct: 1302 ATSPPKGAPTPPAATPPSPKGSPGTP-PPKGAPTPPAVTPPSPKGTPTLPA 1351
Score = 33.1 bits (74), Expect = 0.42
Identities = 33/121 (27%), Positives = 44/121 (36%), Gaps = 18/121 (14%)
Query: 245 AAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQ 304
A P+ AP +P A PS A P+ + G A +GG A SP+
Sbjct: 1164 ATPPPKGAPT-TPAATPPSPKGGLATPSPK----GAPTTPAATPPSPKGGLATP---SPK 1215
Query: 305 AGPGSEGSRPSSRKRGEAAPAP----------PKSPNRQPFVLPDVSKASSPLLAREFLR 354
P + + P S K G A P+P P SP P P + P L+
Sbjct: 1216 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLK 1275
Query: 355 G 355
G
Sbjct: 1276 G 1276
Score = 33.1 bits (74), Expect = 0.42
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 11/102 (10%)
Query: 251 PAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGSE 310
PAP ++P P+R + + + P A ++G GP A +P +
Sbjct: 1688 PAPESTPIITAPTRKGPQTKKSSATSPPICPDPSA---KNGSKGPLSTVAPAPLLPVQKD 1744
Query: 311 GSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREF 352
S+ + +G+ A PK P + P SKAS+PL A F
Sbjct: 1745 SSKTA---KGKDASHSPKGP-----LAPPESKASTPLTAAAF 1778
Score = 32.7 bits (73), Expect = 0.55
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 22/100 (22%)
Query: 242 QAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAAR 301
+ A P+ APA S + P + ARA PA + G+ A + +G P AA
Sbjct: 898 EGPATPAPKQAPALSMTSSSPKK--ARATPAPK----GIPA-----SPSPKGAPTPPAAT 946
Query: 302 --SPQAGPGSEGSR---------PSSRKRGEAAPAPPKSP 330
SP+ GP + + P S K G A P+P +P
Sbjct: 947 PPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAP 986
Score = 32.7 bits (73), Expect = 0.55
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 251 PAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGSE 310
P+P +P P + P+ + PA G A +G PA A P+ P +
Sbjct: 1003 PSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPA--ATPLPKGAPTTP 1060
Query: 311 GSRPSSRKRGEAAPAPPKSP 330
+ S K G A P+ +P
Sbjct: 1061 AATLPSPKGGPATPSLKGAP 1080
Score = 32.0 bits (71), Expect = 0.94
Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 251 PAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPAR------DAARSPQ 304
P+P +P P P A + + P V T G P + SP+
Sbjct: 1556 PSPKKTPAIPTPKEAPATPSSKEASSPPAVTPS----TYKGAPSPKELLIPPAVTSPSPK 1611
Query: 305 AGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKAS 344
P P S ++G A PAP +P P V P K S
Sbjct: 1612 EAPTPPAVTPPSPEKGPATPAPKGTPTSPP-VTPSSLKDS 1650
Score = 31.6 bits (70), Expect = 1.2
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 9/101 (8%)
Query: 235 HAARQRLQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQR---ARGPGVGARL--AGVTR 289
H AA P+ A P P+ PAA P+ + A P GA A
Sbjct: 1122 HKGAPTTPAATPPSPKGGLATPPPKGAPTTPAA-TPPSPKGGLATPPPKGAPTTPAATPP 1180
Query: 290 DGRGGPARDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSP 330
+GG A SP+ P + + P S K G A P+P +P
Sbjct: 1181 SPKGGLATP---SPKGAPTTPAATPPSPKGGLATPSPKGAP 1218
Score = 31.2 bits (69), Expect = 1.6
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 25/123 (20%)
Query: 244 AAAQRPQPAPAASPGAP--GPSRPAARAQPAQRARGP--GVGARLAGVTRDGRGGPARD- 298
AA + PA +P +P GP+ P+ + P A P A VTR+G P++
Sbjct: 1373 AATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGD 1432
Query: 299 ---------------AARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKA 343
A +P+ GP + PSS+ P SP ++P V+ +
Sbjct: 1433 LTPPAVTPVSLKKAPATSAPKGGPAT----PSSKGDPTLPAVTPPSP-KEPPAPKQVATS 1487
Query: 344 SSP 346
SSP
Sbjct: 1488 SSP 1490
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 45.4 bits (106), Expect = 8e-05
Identities = 60/240 (25%), Positives = 81/240 (33%), Gaps = 33/240 (13%)
Query: 109 PPSFPNPRFTPPPRGHQTVSLQVYTELTHDLEMREAQSHQQEAASRELESKCRALESQLE 168
PP+ P P S + + + S + A +LE CR + +
Sbjct: 4 PPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRRRHG 63
Query: 169 ARAA-ANAELRREVAQREALVSALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAA 227
AEL + + QR L + + S+ ++ RR
Sbjct: 64 PEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRR------------------G 105
Query: 228 AYLSCQLHAARQRLQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGV 287
A A R AAAA P P PA P P P A A PA+ R A A
Sbjct: 106 ATPPAPPRAPRGAPAAAAAAAPPPTPAPPP----PPAPVAAAAPARAPR-----AAAAAA 156
Query: 288 TRDGRGGPARDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPL 347
T GPA+ R+ +A P + P A APP P R P P V+ PL
Sbjct: 157 TAPPSPGPAQPGPRAQRAAP---LAAPPPAPAAPPAVAPPAGPRRAP--PPAVAAREPPL 211
Score = 30.4 bits (67), Expect = 2.7
Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 24/104 (23%)
Query: 264 RPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGS-------EGSRPSS 316
R AAR QP +R GA R RG PA AA +P P + P+
Sbjct: 94 RNAARVQPPRR------GATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPAR 147
Query: 317 RKRGEAA-----PAP------PKSPNRQPFVLPDVSKASSPLLA 349
R AA P+P P++ P P + A+ P +A
Sbjct: 148 APRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVA 191
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 45.1 bits (105), Expect = 1e-04
Identities = 49/161 (30%), Positives = 60/161 (37%), Gaps = 41/161 (25%)
Query: 245 AAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQ 304
AA R P PG P SRP G G GAR G G GGP AA SP
Sbjct: 191 AAPRRSARPFRRPGLPLKSRP-----------GSGTGARSCGTWGSG-GGPGTAAASSPS 238
Query: 305 AGPGSEGSRP-------------SSRKRGEA----------APAPPKSPNRQPFVLP--- 338
A S+ +P R+R +PAPP+ R+P L
Sbjct: 239 ADFSSDSPQPIIIFGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRYRKPLTLSFGG 298
Query: 339 DVSKASSPLLA--REFLRGAERGHLLYREDSPSRSWPGPTC 377
VS + P++A R F R R +R S + P P C
Sbjct: 299 GVSSPTHPVVAPRRHFPRSVPRFPAGFRTHSLGTA-PKPKC 338
Score = 35.4 bits (80), Expect = 0.085
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 16/119 (13%)
Query: 235 HAARQRLQAAAAQRPQPAPAASPGAPGPSRP--AARAQPAQRAR-GPGVGARLAGVTRDG 291
H + RL+ AA P+P +++ +P P+ P AAR P + A G G G+R G + G
Sbjct: 113 HQSGSRLRPAAPG-PRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVG 171
Query: 292 RGGPARDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAR 350
P+R + P P + +R AAP P R+P LP S+ S AR
Sbjct: 172 -ARPSRAGGQPP----------PLTCRRCRAAPRRSARPFRRP-GLPLKSRPGSGTGAR 218
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 45.1 bits (105), Expect = 1e-04
Identities = 49/161 (30%), Positives = 60/161 (37%), Gaps = 41/161 (25%)
Query: 245 AAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQ 304
AA R P PG P SRP G G GAR G G GGP AA SP
Sbjct: 191 AAPRRSARPFRRPGLPLKSRP-----------GSGTGARSCGTWGSG-GGPGTAAASSPS 238
Query: 305 AGPGSEGSRP-------------SSRKRGEA----------APAPPKSPNRQPFVLP--- 338
A S+ +P R+R +PAPP+ R+P L
Sbjct: 239 ADFSSDSPQPIIIFGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRYRKPLTLSFGG 298
Query: 339 DVSKASSPLLA--REFLRGAERGHLLYREDSPSRSWPGPTC 377
VS + P++A R F R R +R S + P P C
Sbjct: 299 GVSSPTHPVVAPRRHFPRSVPRFPAGFRTHSLGTA-PKPKC 338
Score = 35.4 bits (80), Expect = 0.085
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 16/119 (13%)
Query: 235 HAARQRLQAAAAQRPQPAPAASPGAPGPSRP--AARAQPAQRAR-GPGVGARLAGVTRDG 291
H + RL+ AA P+P +++ +P P+ P AAR P + A G G G+R G + G
Sbjct: 113 HQSGSRLRPAAPG-PRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVG 171
Query: 292 RGGPARDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAR 350
P+R + P P + +R AAP P R+P LP S+ S AR
Sbjct: 172 -ARPSRAGGQPP----------PLTCRRCRAAPRRSARPFRRP-GLPLKSRPGSGTGAR 218
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 45.1 bits (105), Expect = 1e-04
Identities = 49/161 (30%), Positives = 60/161 (37%), Gaps = 41/161 (25%)
Query: 245 AAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQ 304
AA R P PG P SRP G G GAR G G GGP AA SP
Sbjct: 191 AAPRRSARPFRRPGLPLKSRP-----------GSGTGARSCGTWGSG-GGPGTAAASSPS 238
Query: 305 AGPGSEGSRP-------------SSRKRGEA----------APAPPKSPNRQPFVLP--- 338
A S+ +P R+R +PAPP+ R+P L
Sbjct: 239 ADFSSDSPQPIIIFGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRYRKPLTLSFGG 298
Query: 339 DVSKASSPLLA--REFLRGAERGHLLYREDSPSRSWPGPTC 377
VS + P++A R F R R +R S + P P C
Sbjct: 299 GVSSPTHPVVAPRRHFPRSVPRFPAGFRTHSLGTA-PKPKC 338
Score = 35.4 bits (80), Expect = 0.085
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 16/119 (13%)
Query: 235 HAARQRLQAAAAQRPQPAPAASPGAPGPSRP--AARAQPAQRAR-GPGVGARLAGVTRDG 291
H + RL+ AA P+P +++ +P P+ P AAR P + A G G G+R G + G
Sbjct: 113 HQSGSRLRPAAPG-PRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVG 171
Query: 292 RGGPARDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAR 350
P+R + P P + +R AAP P R+P LP S+ S AR
Sbjct: 172 -ARPSRAGGQPP----------PLTCRRCRAAPRRSARPFRRP-GLPLKSRPGSGTGAR 218
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 45.1 bits (105), Expect = 1e-04
Identities = 60/263 (22%), Positives = 95/263 (36%), Gaps = 21/263 (7%)
Query: 135 LTHDLEMREAQSHQQEAASREL-ESKCRALESQLEARAAANAELRREVAQR-------EA 186
L ++++ Q EA + L + R +E Q E R + RRE QR +
Sbjct: 369 LKQQQQLQQQQQRDPEAHIKHLLHQRQRRIEEQKEERRRVEEQQRREREQRKLQEKEQQR 428
Query: 187 LVSALRCSLRTEERRFLE---ELRRRSHRATVLGTELQKHTEAA-AYL-SCQLHAARQRL 241
+ ++ R EERR E E +R+ LQ+ + AYL S Q +Q+L
Sbjct: 429 RLEDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHAYLKSLQQQQQQQQL 488
Query: 242 QAAAAQRPQPAPAA-----SPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPA 296
Q Q+ P G +PA + +R R ++ G GP
Sbjct: 489 QKQQQQQLLPGDRKPLYHYGRGMNPADKPAWAREVEERTRMNKQQNSPLAKSKPGSTGPE 548
Query: 297 RDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQP---FVLPDVSKASSPLLAREFL 353
++ PG P ++ E P KS QP S P +
Sbjct: 549 PPIPQASPGPPGPLSQTPPMQRPVEPQEGPHKSLQDQPTRNLAAFPASHDPDPAIPAPTA 608
Query: 354 RGAERGHLLYREDSPSRSWPGPT 376
+ RG ++ + P+ PGP+
Sbjct: 609 TPSARGAVIRQNSDPTSEGPGPS 631
Score = 37.4 bits (85), Expect = 0.022
Identities = 46/209 (22%), Positives = 80/209 (38%), Gaps = 19/209 (9%)
Query: 145 QSHQQEAASRELESKCRALESQLEARAAANAELRREVAQREALVSALRCS-----LRTEE 199
+ ++ A RE E K + LE Q ++ L+R++ Q A + +L+ L+ ++
Sbjct: 438 REEERRQAEREQEYKRKQLEEQRQSE-----RLQRQLQQEHAYLKSLQQQQQQQQLQKQQ 492
Query: 200 RRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAAAQRPQ---PAPAAS 256
++ L R+ G A + + +Q+ A +P P P
Sbjct: 493 QQQLLPGDRKPLYHYGRGMNPADKPAWAREVEERTRMNKQQNSPLAKSKPGSTGPEPPIP 552
Query: 257 PGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGSEGSRPSS 316
+PGP P ++ P QR P G + + R A A+ P + + PS+
Sbjct: 553 QASPGPPGPLSQTPPMQRPVEPQEGPHKSLQDQPTRNLAAFPASHDPDPAIPAPTATPSA 612
Query: 317 R------KRGEAAPAPPKSPNRQPFVLPD 339
R + P SPN +V PD
Sbjct: 613 RGAVIRQNSDPTSEGPGPSPNPPAWVRPD 641
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 44.7 bits (104), Expect = 1e-04
Identities = 65/234 (27%), Positives = 88/234 (37%), Gaps = 30/234 (12%)
Query: 148 QQEAASRELESKCRALESQLEARAAANAELRREVAQREALVSALRCSLRTEERRFLEELR 207
QQ+AAS + ++ R+ S LE R A R RE LV R E LR
Sbjct: 471 QQKAASLDERTRQRSPASDLELRFAQELGRIRRSTSREELV------------RSHESLR 518
Query: 208 RRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAAAQRPQPAPAASPGAPGPSRPAA 267
RA ++ E + + + AAAQ P P+ A PG P RP +
Sbjct: 519 ATLQRA----PSPREPGEPPLFSRPSTPKTSRAVSPAAAQPPSPSSAEKPG-DEPGRPRS 573
Query: 268 RAQPAQRARGPGVGARLAGVTRDG---RGGPARDAARSPQAGPGSEGSRPSSRKR---GE 321
R PA R PG G + RD A RSP P ++ P +R + G
Sbjct: 574 RG-PAGRTE-PGEGPQQEVRRRDQFPLTRSRAIQECRSPVPPPAAD--PPEARTKAPPGR 629
Query: 322 AAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGHLLYR---EDSPSRSW 372
P ++ P+ P + A+ P + G E L R ED P W
Sbjct: 630 KREPPAQAVRFLPWATPGLEGAAVPQTLEKNRAGPEAEKRLRRGPEEDGPWGPW 683
Score = 37.0 bits (84), Expect = 0.029
Identities = 36/115 (31%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Query: 249 PQPAPAASPGAPGPSRPAARAQ--PAQRAR-----GPGV-GARLAGVTRDGRGGPARDAA 300
P P PAA P P R + PAQ R PG+ GA + R GP +
Sbjct: 610 PVPPPAADPPEARTKAPPGRKREPPAQAVRFLPWATPGLEGAAVPQTLEKNRAGPEAEKR 669
Query: 301 --RSPQA-GPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREF 352
R P+ GP R +R +G+ A P SP + VS PL A F
Sbjct: 670 LRRGPEEDGPWGPWDRRGARSQGKGRRARPTSPELESSDDSYVSAGEEPLEAPVF 724
Score = 31.6 bits (70), Expect = 1.2
Identities = 48/190 (25%), Positives = 66/190 (34%), Gaps = 31/190 (16%)
Query: 186 ALVSALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAA 245
AL S R LR E R L R RA G+ + T +C AA ++
Sbjct: 761 ALRSEGRLLLRAEGER--HTLLLREARAADAGSYMATATNELGQATC---AASLTVRPGG 815
Query: 246 AQRPQPAPAAS-------------PGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGR 292
+ P +P S PG P P + P+Q R G+ +
Sbjct: 816 STSPFSSPITSDEEYLSPPEEFPEPGETWPRTPTMKPSPSQNRRSSDTGS---------K 866
Query: 293 GGPARDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPL---LA 349
P + Q+ + S R +GE P NRQP V PD + + L
Sbjct: 867 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQP-VRPDQRRFAEEAEGGLC 925
Query: 350 REFLRGAERG 359
R + AERG
Sbjct: 926 RLRILAAERG 935
>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
Length = 1215
Score = 44.3 bits (103), Expect = 2e-04
Identities = 35/95 (36%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 239 QRLQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARD 298
Q +A A +PA A P P RPAAR + R P G + AG G GGPAR
Sbjct: 67 QHRRAVARLPAEPAHAV----PHPVRPAARLRAPARDPVPLAGRQRAGAAPRGPGGPART 122
Query: 299 ----AARSPQAGPGSEGSRPS-SRKRGEAAPAPPK 328
A R GPG E P +R G + P P+
Sbjct: 123 PAVRAGRRAADGPGEEAPAPGRARFSGLSQPRGPQ 157
Score = 30.0 bits (66), Expect = 3.6
Identities = 43/128 (33%), Positives = 52/128 (40%), Gaps = 23/128 (17%)
Query: 222 KHTEAAAYLSCQ-LHAARQRLQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGV 280
+H A A L + HA ++ AA R APA P P R A A P RGPG
Sbjct: 67 QHRRAVARLPAEPAHAVPHPVRPAARLR---APARDP-VPLAGRQRAGAAP----RGPGG 118
Query: 281 GARLAGV-----TRDGRG--GPARDAAR-SPQAGPGSEGSRPSSR-KRGEAAP-----AP 326
AR V DG G PA AR S + P R + R +RG A P P
Sbjct: 119 PARTPAVRAGRRAADGPGEEAPAPGRARFSGLSQPRGPQPRAAVRPRRGGALPRGTGAVP 178
Query: 327 PKSPNRQP 334
+ P +P
Sbjct: 179 ERGPGTEP 186
Score = 30.0 bits (66), Expect = 3.6
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 253 PAASPGAPGPSRPAARAQ------PAQRARGPGVGARLAGVTRDGRGGPARDAARSP-QA 305
PA P P P + A A+ PA+ AR GA A T +G + R+P Q
Sbjct: 443 PAVLPWVPSPGKGTAHARLHFRXRPAEGARRHRCGAEAAPQTWGVQGQLTPTSTRAPGQG 502
Query: 306 GPGSEGSR 313
G S+GSR
Sbjct: 503 GCLSDGSR 510
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 44.3 bits (103), Expect = 2e-04
Identities = 42/172 (24%), Positives = 66/172 (38%), Gaps = 3/172 (1%)
Query: 125 QTVSLQVYTELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRREVAQR 184
+ ++ Q EL LE A + L C L Q E A A AEL+R +++
Sbjct: 1354 KALAAQSLEELRRQLEEESKAKSALAHAVQALRHDCDLLREQHEEEAEAQAELQRLLSKA 1413
Query: 185 EALVSALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAA 244
A V+ R + + EEL + + E ++ EAA L A+ RLQ
Sbjct: 1414 NAEVAQWRSKYEADAIQRTEELEEAKKKLALRLQEAEEGVEAANAKCSSLEKAKLRLQTE 1473
Query: 245 AAQ---RPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRG 293
+ + A +A+ R RA +R + + L R+ RG
Sbjct: 1474 SEDVTLELERATSAAAALDKKQRHLERALEERRRQEEEMQRELEAAQRESRG 1525
Score = 35.0 bits (79), Expect = 0.11
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 25/133 (18%)
Query: 133 TELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRREVAQREALVSALR 192
++L+ +E + Q + +EL+++ LE +LEA AA A + ++ A+ + L
Sbjct: 1137 SQLSLRVEDEQLLGAQMQKKIKELQARAEELEEELEAERAARARVEKQRAEAARELEELS 1196
Query: 193 ----------------CSLRTEE----RRFLEELRRRSHRATVLGTELQKHTEAAAYLSC 232
C R E RR LEE R H ATV +K E AA L
Sbjct: 1197 ERLEEAGGASAGQREGCRKREAELGRLRRELEEAALR-HEATVAALR-RKQAEGAAELGE 1254
Query: 233 Q---LHAARQRLQ 242
Q L RQ+L+
Sbjct: 1255 QVDSLQRVRQKLE 1267
>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
Length = 864
Score = 43.9 bits (102), Expect = 2e-04
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 228 AYLSCQLHAARQRLQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARG--PGVGARLA 285
++L Q A +R ++ + APA P PG PA PA A G P V +R
Sbjct: 761 SWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARPGSRGPAPGPPPAGSALGGAPPVPSR-P 819
Query: 286 GVTRDGRGGPARDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVL 337
G + D G P + +R +A PG PS + G+A+P+ P+SP R PF L
Sbjct: 820 GASPDPFGPPPQVPSRPNRAPPGV----PS--RSGQASPSRPESP-RPPFDL 864
Score = 35.8 bits (81), Expect = 0.065
Identities = 34/121 (28%), Positives = 41/121 (33%), Gaps = 28/121 (23%)
Query: 241 LQAAAAQRPQPAPAASPGAPGPSRPAAR----AQPAQRARGPGVGARLAGVTRDGRGGPA 296
+ P P P S PA R + P + R P V PA
Sbjct: 745 INTTTVSTPMPPPVDDSWLQVQSVPAGRRSPTSSPTPQRRAPAVP-------------PA 791
Query: 297 RDAARSPQAGPGSEGS----RPSSRKRGEAAPAP-------PKSPNRQPFVLPDVSKASS 345
R +R P GP GS P R A+P P P PNR P +P S +S
Sbjct: 792 RPGSRGPAPGPPPAGSALGGAPPVPSRPGASPDPFGPPPQVPSRPNRAPPGVPSRSGQAS 851
Query: 346 P 346
P
Sbjct: 852 P 852
>gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]
Length = 1235
Score = 43.9 bits (102), Expect = 2e-04
Identities = 58/219 (26%), Positives = 86/219 (39%), Gaps = 33/219 (15%)
Query: 140 EMREAQSHQQEAASRE----LESKCRALESQ-LEARAAANAELRREVAQREALVSALRCS 194
++++ Q+ ++ R E +CR + + L AR + + +L RE ++ L C+
Sbjct: 619 QLQQCQAEEEAGLLRRQRQYFELQCRQYKRKMLLARHSLDQDLLREDLNKKQTQKDLECA 678
Query: 195 LRTEERRFLEELRRRS----HRATVLGTELQKHTEAAAYLSC---------QLHAARQR- 240
L + EL R R T LQ TE L Q HAA+ R
Sbjct: 679 LLLRQHEATRELELRQLQAVQRTRAELTRLQHQTELGNQLEYNKRREQELRQKHAAQVRQ 738
Query: 241 ----LQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPA 296
L+ A QRP P PGA GP P Q+ PG A L D R
Sbjct: 739 QPKSLKVRAGQRPPGLPLPIPGALGP--PNTGTPIEQQPCSPGQEAVL-----DQRMLGE 791
Query: 297 RDAARSPQAGPGSEGSRPSSRKR---GEAAPAPPKSPNR 332
+ A + G EG+ +++ GE + AP SP +
Sbjct: 792 EEEAVGERRILGKEGATLEPKQQRILGEESGAPSPSPQK 830
>gi|115527070 alpha 2 type VI collagen isoform 2C2a' precursor [Homo
sapiens]
Length = 828
Score = 43.9 bits (102), Expect = 2e-04
Identities = 30/89 (33%), Positives = 35/89 (39%), Gaps = 12/89 (13%)
Query: 250 QPAPAASPGAPGPSRPAARAQPAQRA----RGPGVGARLAGVTRDGRGGPARDAARSPQA 305
QP P PG PG S P R P ++ RGP G G+ +G P R + A
Sbjct: 503 QPGPKGDPGRPGFSYPGPRGAPGEKGEPGPRGPEGGRGDFGL----KGEPGRKGEKGEPA 558
Query: 306 GPGSEGSRPSSRKRG----EAAPAPPKSP 330
PG G RG E P PP P
Sbjct: 559 DPGPPGEPGPRGPRGVPGPEGEPGPPGDP 587
Score = 35.0 bits (79), Expect = 0.11
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 15/87 (17%)
Query: 251 PAPAASPGAPG-------PSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSP 303
P A SPG G P RP R P + +GA+ + + G P +
Sbjct: 357 PGEAGSPGERGDQGGKGDPGRPGRRGPPGE------IGAKGSKGYQGNSGAPGSPGVKGA 410
Query: 304 QAGPGSEGSRPSSRKRGEAAPAPPKSP 330
+ GPG G + +RG+ P SP
Sbjct: 411 KGGPGPRGPKGEPGRRGD--PGTKGSP 435
Score = 31.2 bits (69), Expect = 1.6
Identities = 30/101 (29%), Positives = 39/101 (38%), Gaps = 16/101 (15%)
Query: 247 QRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVT--RDGRGGPARDAARSPQ 304
+R P SPG+ GP + P GP LAG + +G R PQ
Sbjct: 425 RRGDPGTKGSPGSDGPK--GEKGDP-----GPEGPRGLAGEVGNKGAKGDRGLPGPRGPQ 477
Query: 305 AG---PGSEGSR---PSSRKRGEAA-PAPPKSPNRQPFVLP 338
PG +GSR + RG++ P P P R F P
Sbjct: 478 GALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYP 518
Score = 28.9 bits (63), Expect = 8.0
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 14/63 (22%)
Query: 251 PAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGSE 310
P + G PGP P + +P +R PG +G P D + + PG E
Sbjct: 405 PGVKGAKGGPGPRGP--KGEPGRRG-DPGT-----------KGSPGSDGPKGEKGDPGPE 450
Query: 311 GSR 313
G R
Sbjct: 451 GPR 453
>gi|115527066 alpha 2 type VI collagen isoform 2C2a precursor [Homo
sapiens]
Length = 918
Score = 43.9 bits (102), Expect = 2e-04
Identities = 30/89 (33%), Positives = 35/89 (39%), Gaps = 12/89 (13%)
Query: 250 QPAPAASPGAPGPSRPAARAQPAQRA----RGPGVGARLAGVTRDGRGGPARDAARSPQA 305
QP P PG PG S P R P ++ RGP G G+ +G P R + A
Sbjct: 503 QPGPKGDPGRPGFSYPGPRGAPGEKGEPGPRGPEGGRGDFGL----KGEPGRKGEKGEPA 558
Query: 306 GPGSEGSRPSSRKRG----EAAPAPPKSP 330
PG G RG E P PP P
Sbjct: 559 DPGPPGEPGPRGPRGVPGPEGEPGPPGDP 587
Score = 35.0 bits (79), Expect = 0.11
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 15/87 (17%)
Query: 251 PAPAASPGAPG-------PSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSP 303
P A SPG G P RP R P + +GA+ + + G P +
Sbjct: 357 PGEAGSPGERGDQGGKGDPGRPGRRGPPGE------IGAKGSKGYQGNSGAPGSPGVKGA 410
Query: 304 QAGPGSEGSRPSSRKRGEAAPAPPKSP 330
+ GPG G + +RG+ P SP
Sbjct: 411 KGGPGPRGPKGEPGRRGD--PGTKGSP 435
Score = 31.2 bits (69), Expect = 1.6
Identities = 30/101 (29%), Positives = 39/101 (38%), Gaps = 16/101 (15%)
Query: 247 QRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVT--RDGRGGPARDAARSPQ 304
+R P SPG+ GP + P GP LAG + +G R PQ
Sbjct: 425 RRGDPGTKGSPGSDGPK--GEKGDP-----GPEGPRGLAGEVGNKGAKGDRGLPGPRGPQ 477
Query: 305 AG---PGSEGSR---PSSRKRGEAA-PAPPKSPNRQPFVLP 338
PG +GSR + RG++ P P P R F P
Sbjct: 478 GALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYP 518
Score = 28.9 bits (63), Expect = 8.0
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 14/63 (22%)
Query: 251 PAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGSE 310
P + G PGP P + +P +R PG +G P D + + PG E
Sbjct: 405 PGVKGAKGGPGPRGP--KGEPGRRG-DPGT-----------KGSPGSDGPKGEKGDPGPE 450
Query: 311 GSR 313
G R
Sbjct: 451 GPR 453
>gi|115527062 alpha 2 type VI collagen isoform 2C2 precursor [Homo
sapiens]
Length = 1019
Score = 43.9 bits (102), Expect = 2e-04
Identities = 30/89 (33%), Positives = 35/89 (39%), Gaps = 12/89 (13%)
Query: 250 QPAPAASPGAPGPSRPAARAQPAQRA----RGPGVGARLAGVTRDGRGGPARDAARSPQA 305
QP P PG PG S P R P ++ RGP G G+ +G P R + A
Sbjct: 503 QPGPKGDPGRPGFSYPGPRGAPGEKGEPGPRGPEGGRGDFGL----KGEPGRKGEKGEPA 558
Query: 306 GPGSEGSRPSSRKRG----EAAPAPPKSP 330
PG G RG E P PP P
Sbjct: 559 DPGPPGEPGPRGPRGVPGPEGEPGPPGDP 587
Score = 35.0 bits (79), Expect = 0.11
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 15/87 (17%)
Query: 251 PAPAASPGAPG-------PSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSP 303
P A SPG G P RP R P + +GA+ + + G P +
Sbjct: 357 PGEAGSPGERGDQGGKGDPGRPGRRGPPGE------IGAKGSKGYQGNSGAPGSPGVKGA 410
Query: 304 QAGPGSEGSRPSSRKRGEAAPAPPKSP 330
+ GPG G + +RG+ P SP
Sbjct: 411 KGGPGPRGPKGEPGRRGD--PGTKGSP 435
Score = 31.2 bits (69), Expect = 1.6
Identities = 30/101 (29%), Positives = 39/101 (38%), Gaps = 16/101 (15%)
Query: 247 QRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVT--RDGRGGPARDAARSPQ 304
+R P SPG+ GP + P GP LAG + +G R PQ
Sbjct: 425 RRGDPGTKGSPGSDGPK--GEKGDP-----GPEGPRGLAGEVGNKGAKGDRGLPGPRGPQ 477
Query: 305 AG---PGSEGSR---PSSRKRGEAA-PAPPKSPNRQPFVLP 338
PG +GSR + RG++ P P P R F P
Sbjct: 478 GALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYP 518
Score = 28.9 bits (63), Expect = 8.0
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 14/63 (22%)
Query: 251 PAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGSE 310
P + G PGP P + +P +R PG +G P D + + PG E
Sbjct: 405 PGVKGAKGGPGPRGP--KGEPGRRG-DPGT-----------KGSPGSDGPKGEKGDPGPE 450
Query: 311 GSR 313
G R
Sbjct: 451 GPR 453
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 43.9 bits (102), Expect = 2e-04
Identities = 31/115 (26%), Positives = 45/115 (39%)
Query: 128 SLQVYTELTHDLEMREAQSHQQEAASRELESKCRALESQLEARAAANAELRREVAQREAL 187
S Q EL H LE + A + C L Q E AEL+R +++ +
Sbjct: 1311 STQQIEELKHQLEEETKAKNALAHALQSSRHDCDLLREQYEEEQEGKAELQRALSKANSE 1370
Query: 188 VSALRCSLRTEERRFLEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQ 242
V+ R T+ + EEL + E ++H EA L +QRLQ
Sbjct: 1371 VAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEEHVEAVNAKCASLEKTKQRLQ 1425
>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 43.5 bits (101), Expect = 3e-04
Identities = 44/155 (28%), Positives = 61/155 (39%), Gaps = 9/155 (5%)
Query: 156 LESKCRALESQLEARAAANAELRREVAQREALVSALRC--SLRTEERRFLEELRRRSHRA 213
L S+ + Q RA+ +R E R+ LV + + R R LRRR R
Sbjct: 378 LRSRSESPAGQCVLRASQQRGVRLEGGGRQQLVPSQVAWRAARAPGRHQAAVLRRRRARV 437
Query: 214 T----VLGTELQKHTEAAAYLSCQLHAARQRLQAAAAQRPQPAPAASPGAPGPSRPAARA 269
+ + +A L QLHA RL + A+ PAP+A P+R A
Sbjct: 438 ARAQQLARLRVGHAVQAPQALQAQLHA---RLPSRRARSSAPAPSAQGRCMTPARSPVAA 494
Query: 270 QPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQ 304
+ A R RG G + TR +G R PQ
Sbjct: 495 REAARLRGARPGPAASAATRMWQGSGRRRPGPDPQ 529
Score = 39.3 bits (90), Expect = 0.006
Identities = 74/291 (25%), Positives = 111/291 (38%), Gaps = 41/291 (14%)
Query: 97 LKALLGGGPRDVPPSFPNPRFTPPP---RGHQTVSLQVYTELTHDLEMREAQSHQQEAAS 153
L L+ G + + S PR +PPP ++ + ++R+ AA
Sbjct: 256 LSLLVSTGTKGLGRSLVTPRPSPPPPLTPQAESGGVDAAPRAPETRQVRKVDGVNPAAAG 315
Query: 154 -RELESKCRALESQLEARAAANAELRREVAQREALVSALRCS----LRTEERRFLEELRR 208
R + C ++S+ A A L + ++ CS LR R L L
Sbjct: 316 PRGGATACSGVQSRRPQGLALRATLLPAKRSADMRWNSGSCSHFHILRKVSRPDLSLLH- 374
Query: 209 RSHRATVLGTELQKHTEAAAYLSCQLHAARQ---RLQAAAAQRPQPAPAASPGAPGPSRP 265
G L+ +E+ A C L A++Q RL+ Q+ P+ A A P R
Sbjct: 375 --------GLGLRSRSESPAG-QCVLRASQQRGVRLEGGGRQQLVPSQVAWRAARAPGRH 425
Query: 266 AARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGSEGSRPSSRKRGEAAPA 325
A +RAR AR + R G A ++PQA +R SR+ +APA
Sbjct: 426 QAAVLRRRRAR----VARAQQLARLRVG----HAVQAPQALQAQLHARLPSRRARSSAPA 477
Query: 326 PPKSPNRQPFVLPDVSKASSPLLAREF--LRGAERGHLLYREDSPSRSWPG 374
P ++ A SP+ ARE LRGA G + +R W G
Sbjct: 478 PSAQGR-------CMTPARSPVAAREAARLRGARPGP---AASAATRMWQG 518
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 43.5 bits (101), Expect = 3e-04
Identities = 46/120 (38%), Positives = 55/120 (45%), Gaps = 20/120 (16%)
Query: 248 RPQPAPAASPGAPGPSRPAAR------AQPAQRARGP--GVGARLAGVTRDG---RGGPA 296
RP PA AA P AP AAR AQP +R+ GP G G +A RG PA
Sbjct: 49 RPAPA-AAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPA 107
Query: 297 RDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGA 356
AA SP P +RPSS P+ P P+R P + P A P LAR +G+
Sbjct: 108 VPAAPSPGPLP----ARPSS---PPPRPSLPSGPHR-PVLPPSALAAPRPPLARPLPQGS 159
>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 43.5 bits (101), Expect = 3e-04
Identities = 44/155 (28%), Positives = 61/155 (39%), Gaps = 9/155 (5%)
Query: 156 LESKCRALESQLEARAAANAELRREVAQREALVSALRC--SLRTEERRFLEELRRRSHRA 213
L S+ + Q RA+ +R E R+ LV + + R R LRRR R
Sbjct: 378 LRSRSESPAGQCVLRASQQRGVRLEGGGRQQLVPSQVAWRAARAPGRHQAAVLRRRRARV 437
Query: 214 T----VLGTELQKHTEAAAYLSCQLHAARQRLQAAAAQRPQPAPAASPGAPGPSRPAARA 269
+ + +A L QLHA RL + A+ PAP+A P+R A
Sbjct: 438 ARAQQLARLRVGHAVQAPQALQAQLHA---RLPSRRARSSAPAPSAQGRCMTPARSPVAA 494
Query: 270 QPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQ 304
+ A R RG G + TR +G R PQ
Sbjct: 495 REAARLRGARPGPAASAATRMWQGSGRRRPGPDPQ 529
Score = 39.3 bits (90), Expect = 0.006
Identities = 74/291 (25%), Positives = 111/291 (38%), Gaps = 41/291 (14%)
Query: 97 LKALLGGGPRDVPPSFPNPRFTPPP---RGHQTVSLQVYTELTHDLEMREAQSHQQEAAS 153
L L+ G + + S PR +PPP ++ + ++R+ AA
Sbjct: 256 LSLLVSTGTKGLGRSLVTPRPSPPPPLTPQAESGGVDAAPRAPETRQVRKVDGVNPAAAG 315
Query: 154 -RELESKCRALESQLEARAAANAELRREVAQREALVSALRCS----LRTEERRFLEELRR 208
R + C ++S+ A A L + ++ CS LR R L L
Sbjct: 316 PRGGATACSGVQSRRPQGLALRATLLPAKRSADMRWNSGSCSHFHILRKVSRPDLSLLH- 374
Query: 209 RSHRATVLGTELQKHTEAAAYLSCQLHAARQ---RLQAAAAQRPQPAPAASPGAPGPSRP 265
G L+ +E+ A C L A++Q RL+ Q+ P+ A A P R
Sbjct: 375 --------GLGLRSRSESPAG-QCVLRASQQRGVRLEGGGRQQLVPSQVAWRAARAPGRH 425
Query: 266 AARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGSEGSRPSSRKRGEAAPA 325
A +RAR AR + R G A ++PQA +R SR+ +APA
Sbjct: 426 QAAVLRRRRAR----VARAQQLARLRVG----HAVQAPQALQAQLHARLPSRRARSSAPA 477
Query: 326 PPKSPNRQPFVLPDVSKASSPLLAREF--LRGAERGHLLYREDSPSRSWPG 374
P ++ A SP+ ARE LRGA G + +R W G
Sbjct: 478 PSAQGR-------CMTPARSPVAAREAARLRGARPGP---AASAATRMWQG 518
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 43.5 bits (101), Expect = 3e-04
Identities = 46/120 (38%), Positives = 55/120 (45%), Gaps = 20/120 (16%)
Query: 248 RPQPAPAASPGAPGPSRPAAR------AQPAQRARGP--GVGARLAGVTRDG---RGGPA 296
RP PA AA P AP AAR AQP +R+ GP G G +A RG PA
Sbjct: 49 RPAPA-AAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPA 107
Query: 297 RDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGA 356
AA SP P +RPSS P+ P P+R P + P A P LAR +G+
Sbjct: 108 VPAAPSPGPLP----ARPSS---PPPRPSLPSGPHR-PVLPPSALAAPRPPLARPLPQGS 159
>gi|178557734 microtubule-associated protein tau isoform 6 [Homo
sapiens]
Length = 776
Score = 43.1 bits (100), Expect = 4e-04
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 239 QRLQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARD 298
Q+ QA A + P P P P P + A + R P G R RG P +
Sbjct: 479 QKGQANATRIPAKTP------PAPKTPPSSATKQVQRRPPPAGPR------SERGEPPKS 526
Query: 299 AARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAR 350
RS + PGS G+ P SR R + P PP ++ V+ K+ S +R
Sbjct: 527 GDRSGYSSPGSPGT-PGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSSAKSR 577
Score = 30.8 bits (68), Expect = 2.1
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 27/116 (23%)
Query: 252 APAASPGAPGPS----------------RPAARAQPAQRARGPGVGARLAGVTRDGRGGP 295
AP P A GPS +PAA + +R P + AR+ ++DG G
Sbjct: 330 APGEGPEARGPSLGEDTKEADLPEPSEKQPAAAPRGKPVSRVPQLKARMVSKSKDGTGSD 389
Query: 296 ARDAARSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLARE 351
+ A S ++ + +RP +P P + P + P SSP + E
Sbjct: 390 DKKAKTSTRSSAKTLKNRPC------LSPKHPTPGSSDPLIQP-----SSPAVCPE 434
>gi|242332545 coiled-coil domain containing 121-like [Homo sapiens]
Length = 439
Score = 43.1 bits (100), Expect = 4e-04
Identities = 68/244 (27%), Positives = 96/244 (39%), Gaps = 51/244 (20%)
Query: 142 REAQSHQQEAASRELESKCRALESQLEARAAANAELRREVAQREALVSALRCSLRTEERR 201
REA+ Q A R RAL + +A A N LR+E+ L+ R L RR
Sbjct: 192 REARQRVQSLARRAEREAVRALVAHTQAIKADNGRLRQEL-----LLLLRRTQLLHHTRR 246
Query: 202 FLEELRRRSHR--------ATVLG--------------TELQKHTEAAAYLSCQLHAARQ 239
L E R + HR A V G + T L+ + +R
Sbjct: 247 QLLEQREQLHREHEDTRDLARVHGWLRRGPGGPPLWERPAFSQPTSRPGSLAAPISPSR- 305
Query: 240 RLQAAAAQRPQPAPA-ASPGAPG--PSRPAARAQ----PAQRARGPG-----VGARLAGV 287
AA+Q P P+ A+P A PSR A+R + +R P VG+R+ +
Sbjct: 306 ----AASQTPSVVPSRAAPRASSVVPSREASRVPSLVLSSMDSRVPSLATSKVGSRMPSL 361
Query: 288 TRDGRGGPARDAARSPQAGPGSEGSRP--SSRKRGEAAPAPPK-----SPNRQPFVLPDV 340
T G A +S + S GS P SS+ + + PK S +R P +LP
Sbjct: 362 TASRAGSRALSLVQSLEGSGISSGSSPRVSSQDTLRSTKSGPKLLSGLSRDRDPALLPPQ 421
Query: 341 SKAS 344
S+ S
Sbjct: 422 SEDS 425
>gi|169167297 PREDICTED: similar to hCG18094 [Homo sapiens]
Length = 459
Score = 43.1 bits (100), Expect = 4e-04
Identities = 69/244 (28%), Positives = 98/244 (40%), Gaps = 51/244 (20%)
Query: 128 SLQVYTELTHDLEMREAQSHQQEAASR-ELESKCRALESQ-------------------- 166
++Q E + L R AQ+ Q+E R EL S+ RALE+Q
Sbjct: 179 TVQEAIEESRGLLQRRAQAAQEEQRRRCELISQLRALETQPTRKGKLVDLTQIPGYGLEG 238
Query: 167 ------LEARAAANAE--LRREVAQREALVSALRCSLRTEERRFLEEL---RRRSHRATV 215
L R A E R+E +R+ ++ R + E + +E++ R R+
Sbjct: 239 EMSIVELRERLALLKENQRRKEEEKRDQIIQGKRTKSQ-ELQNMVEQISLCRAAMGRSAA 297
Query: 216 LGTELQKHTEAAAYLSCQ---LHAARQRLQAAAAQRPQPAPAASPGAPGPSRPAARA--- 269
L E +K AA Q + R+R+ AA+R + A AP +RP R
Sbjct: 298 LRWEEKKALAAAPAAPSQDERVQQLRRRISERAAERSRQAALLHVSAPRTARPKPRVSPD 357
Query: 270 ---QPAQRARGPGVG--ARLAGV---TRDGRGGPARDAA-RSPQAGPGSEGSRPSSRKRG 320
+P + G G G AR AG R RG R AA R AG G G P+ R
Sbjct: 358 WWEEPGRLKAGAGWGWRARRAGTGVPGRGWRGDRVRSAAGRYAAAGAGGGGGVPA---RA 414
Query: 321 EAAP 324
+A P
Sbjct: 415 DAFP 418
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,396,188
Number of Sequences: 37866
Number of extensions: 1102603
Number of successful extensions: 17943
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 1563
Number of HSP's that attempted gapping in prelim test: 11285
Number of HSP's gapped (non-prelim): 6865
length of query: 378
length of database: 18,247,518
effective HSP length: 104
effective length of query: 274
effective length of database: 14,309,454
effective search space: 3920790396
effective search space used: 3920790396
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.