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Search of human proteins with 169210552
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169210552 PREDICTED: hypothetical protein [Homo sapiens]
(220 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169210552 PREDICTED: hypothetical protein [Homo sapiens] 470 e-133
gi|169209547 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|113426180 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239751035 PREDICTED: hypothetical protein XP_002347680 [Homo ... 42 4e-04
gi|18079216 CASK interacting protein 1 [Homo sapiens] 40 0.002
gi|239747741 PREDICTED: hypothetical protein XP_002348258 [Homo ... 35 0.038
gi|239741607 PREDICTED: hypothetical protein XP_002342248 [Homo ... 35 0.038
gi|149944536 ichthyin protein [Homo sapiens] 34 0.11
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 33 0.15
gi|5174751 Yes-associated protein 1, 65kDa isoform 2 [Homo sapiens] 33 0.15
gi|194306653 Yes-associated protein 1, 65kDa isoform 1 [Homo sap... 33 0.15
gi|239748599 PREDICTED: hypothetical protein XP_002346728 [Homo ... 32 0.33
gi|239742616 PREDICTED: hypothetical protein XP_002342550 [Homo ... 32 0.33
gi|46487911 zinc finger protein 406 isoform ZFAT-1 [Homo sapiens] 32 0.33
gi|71480169 zinc finger protein 406 isoform TR-ZFAT [Homo sapiens] 32 0.33
gi|71143119 signal-induced proliferation-associated 1 like 3 [Ho... 32 0.33
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 32 0.33
gi|91208420 bassoon protein [Homo sapiens] 31 0.73
gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo s... 31 0.73
gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H... 31 0.73
gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H... 31 0.73
gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo s... 31 0.73
gi|24431975 hypothetical protein LOC26148 [Homo sapiens] 31 0.73
gi|157311635 FAM83H [Homo sapiens] 31 0.95
gi|41281612 zinc finger protein 828 [Homo sapiens] 31 0.95
gi|17511255 poly(A) binding protein interacting protein 1 isofor... 31 0.95
gi|158534059 formin binding protein 4 [Homo sapiens] 31 0.95
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 30 1.2
gi|197333868 T-box 2 [Homo sapiens] 30 1.6
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 30 1.6
>gi|169210552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 220
Score = 470 bits (1209), Expect = e-133
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MRATACPRGSHLFPSSQDSGGGTSPGTLESREHRPPWMPGRRECCCLWTLRRKEHCCLWT 60
MRATACPRGSHLFPSSQDSGGGTSPGTLESREHRPPWMPGRRECCCLWTLRRKEHCCLWT
Sbjct: 1 MRATACPRGSHLFPSSQDSGGGTSPGTLESREHRPPWMPGRRECCCLWTLRRKEHCCLWT 60
Query: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKS 120
PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKS
Sbjct: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKS 120
Query: 121 KLFFQSSVSPTSSSFPLRVPVGVLHPQSTVQEPRIHGRPRATARQIIRSLLDIWGFQLSV 180
KLFFQSSVSPTSSSFPLRVPVGVLHPQSTVQEPRIHGRPRATARQIIRSLLDIWGFQLSV
Sbjct: 121 KLFFQSSVSPTSSSFPLRVPVGVLHPQSTVQEPRIHGRPRATARQIIRSLLDIWGFQLSV 180
Query: 181 FIKDTVSAPGQRLLWSSSPRTSGVKFCSQLRPCPGRCTIP 220
FIKDTVSAPGQRLLWSSSPRTSGVKFCSQLRPCPGRCTIP
Sbjct: 181 FIKDTVSAPGQRLLWSSSPRTSGVKFCSQLRPCPGRCTIP 220
>gi|169209547 PREDICTED: hypothetical protein [Homo sapiens]
Length = 130
Score = 43.9 bits (102), Expect = 1e-04
Identities = 24/48 (50%), Positives = 28/48 (58%)
Query: 69 PVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHP 116
P +P K+GA +DA KE L PVDP KEGAL PV G +P P
Sbjct: 83 PWNPGKQGAPTALDARKEGVLLPVDPEKEGALLPVDAGKEKAPAARGP 130
Score = 43.1 bits (100), Expect = 2e-04
Identities = 21/41 (51%), Positives = 24/41 (58%)
Query: 59 WTPARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGA 99
W P ++ +D KEG L PVD KE AL PVD GKE A
Sbjct: 84 WNPGKQGAPTALDARKEGVLLPVDPEKEGALLPVDAGKEKA 124
>gi|113426180 PREDICTED: hypothetical protein [Homo sapiens]
Length = 130
Score = 43.9 bits (102), Expect = 1e-04
Identities = 24/48 (50%), Positives = 28/48 (58%)
Query: 69 PVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHP 116
P +P K+GA +DA KE L PVDP KEGAL PV G +P P
Sbjct: 83 PWNPGKQGAPTALDARKEGVLLPVDPEKEGALLPVDAGKEKAPAARGP 130
Score = 43.1 bits (100), Expect = 2e-04
Identities = 21/41 (51%), Positives = 24/41 (58%)
Query: 59 WTPARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGA 99
W P ++ +D KEG L PVD KE AL PVD GKE A
Sbjct: 84 WNPGKQGAPTALDARKEGVLLPVDPEKEGALLPVDAGKEKA 124
>gi|239751035 PREDICTED: hypothetical protein XP_002347680 [Homo
sapiens]
Length = 130
Score = 42.0 bits (97), Expect = 4e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 69 PVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHP 116
P +P K+GA +DA KE + P+DP KEGAL PV G +P P
Sbjct: 83 PWNPGKQGAPTALDARKEGVMLPLDPEKEGALLPVDAGKEKAPAARGP 130
Score = 41.2 bits (95), Expect = 7e-04
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 59 WTPARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGA 99
W P ++ +D KEG + P+D KE AL PVD GKE A
Sbjct: 84 WNPGKQGAPTALDARKEGVMLPLDPEKEGALLPVDAGKEKA 124
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 39.7 bits (91), Expect = 0.002
Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
Query: 68 PPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKSKLFFQSS 127
PP +P PP D A LPP+ P + A +P P P P L P K Q S
Sbjct: 1196 PPAEP------PPTDL---AHLPPLPPPEGEARKPAKPPVSPKPVLTQPVPK----LQGS 1242
Query: 128 VSPTSSSFPLRVPVGVLHPQSTVQEPRIHGRP 159
+PTS PL P + + R HG P
Sbjct: 1243 PTPTSKKVPLPGP-------GSPEVKRAHGTP 1267
>gi|239747741 PREDICTED: hypothetical protein XP_002348258 [Homo
sapiens]
Length = 118
Score = 35.4 bits (80), Expect = 0.038
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Query: 14 PSSQDSGGGTSPGTLE---SREHRPPWMPGRRECCCLWTLRRKEHCCLW 59
P + GG +PG H P PG CCLW RK+ CC W
Sbjct: 46 PQRKVPGGRPAPGRRRPWPENHHEAPPSPGDPGDCCLW---RKQRCCSW 91
>gi|239741607 PREDICTED: hypothetical protein XP_002342248 [Homo
sapiens]
Length = 118
Score = 35.4 bits (80), Expect = 0.038
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Query: 14 PSSQDSGGGTSPGTLE---SREHRPPWMPGRRECCCLWTLRRKEHCCLW 59
P + GG +PG H P PG CCLW RK+ CC W
Sbjct: 46 PQRKVPGGRPAPGRRRPWPENHHEAPPSPGDPGDCCLW---RKQRCCSW 91
>gi|149944536 ichthyin protein [Homo sapiens]
Length = 466
Score = 33.9 bits (76), Expect = 0.11
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 68 PPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSP 111
PP+ P+ G AG ++ P + G GA+RP V C P P
Sbjct: 19 PPLGPDPGGFSRASHAGDKSRPPAPELGSPGAVRPRVGSCAPGP 62
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 33.5 bits (75), Expect = 0.15
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 68 PPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVP----GCVPSPRLLHPRAKSKLF 123
PPV P + PPV ++ PPV P + PV P G P P P S+
Sbjct: 682 PPVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTGDSGAPPVP----PTGDSE-- 735
Query: 124 FQSSVSPTSSSFPLRVP 140
+ V PT S ++P
Sbjct: 736 -AAPVPPTDDSKEAQMP 751
Score = 33.1 bits (74), Expect = 0.19
Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 11/84 (13%)
Query: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVP----GCVPSPRLLHP 116
P PPV P + PPV ++ PPV P + PV P G P P P
Sbjct: 609 PTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVP----P 664
Query: 117 RAKSKLFFQSSVSPTSSSFPLRVP 140
S V PT + P VP
Sbjct: 665 TGDSG---APPVPPTGDAGPPPVP 685
Score = 32.7 bits (73), Expect = 0.25
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVP----GCVPSP 111
P PPV P + PPV ++ PPV P + PV P G P P
Sbjct: 587 PTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVP 641
Score = 32.7 bits (73), Expect = 0.25
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVP----GCVPSP 111
P PPV P + PPV ++ PPV P + PV P G P P
Sbjct: 598 PTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVP 652
Score = 32.7 bits (73), Expect = 0.25
Identities = 18/60 (30%), Positives = 23/60 (38%)
Query: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKS 120
P PPV P + PPV ++ PPV P + PV P P + P S
Sbjct: 631 PTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTGDS 690
Score = 32.7 bits (73), Expect = 0.25
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVP 105
P PPV P + PPV +A PPV P + PV P
Sbjct: 653 PTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPVPP 697
Score = 32.3 bits (72), Expect = 0.33
Identities = 15/45 (33%), Positives = 19/45 (42%)
Query: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVP 105
P PPV P + PPV ++ PPV P + PV P
Sbjct: 664 PTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPPVTP 708
Score = 30.4 bits (67), Expect = 1.2
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVP----GCVPSP 111
P PV P + PPV ++ PPV P + PV P G P P
Sbjct: 576 PTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVP 630
Score = 28.9 bits (63), Expect = 3.6
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVP 105
P PPV P + PPV ++ PV P + PV P
Sbjct: 686 PTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTGDSGAPPVPP 730
Score = 28.9 bits (63), Expect = 3.6
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVP 105
P PPV P + PV ++ PPV P + PV P
Sbjct: 697 PTGDSGAPPVTPTGDSETAPVPPTGDSGAPPVPPTGDSEAAPVPP 741
Score = 28.5 bits (62), Expect = 4.7
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Query: 60 TPARKKHQPPVDPEKEGALPPVDA---GKEAALPPVDPGKEGALRPVV 104
TP PV P + PPV + A +PP D KE + V+
Sbjct: 707 TPTGDSETAPVPPTGDSGAPPVPPTGDSEAAPVPPTDDSKEAQMPAVI 754
>gi|5174751 Yes-associated protein 1, 65kDa isoform 2 [Homo sapiens]
Length = 454
Score = 33.5 bits (75), Expect = 0.15
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 67 QPPVDPEKEGALPPVDAGKEAALPPVDPGKEG-ALRPVVPGCVPS-PRLLHPRAKS---- 120
QPP P +G P + PP PG+ A P P+ +++H R S
Sbjct: 6 QPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGDSETDL 65
Query: 121 KLFFQSSVSPTSSSFPLRVPVGVLH-PQSTVQ--EPRIHGRPRAT 162
+ F + ++P +++ P VP+ + P S + EP+ H R +T
Sbjct: 66 EALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQAST 110
>gi|194306653 Yes-associated protein 1, 65kDa isoform 1 [Homo
sapiens]
Length = 504
Score = 33.5 bits (75), Expect = 0.15
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 67 QPPVDPEKEGALPPVDAGKEAALPPVDPGKEG-ALRPVVPGCVPS-PRLLHPRAKS---- 120
QPP P +G P + PP PG+ A P P+ +++H R S
Sbjct: 6 QPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGDSETDL 65
Query: 121 KLFFQSSVSPTSSSFPLRVPVGVLH-PQSTVQ--EPRIHGRPRAT 162
+ F + ++P +++ P VP+ + P S + EP+ H R +T
Sbjct: 66 EALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQAST 110
>gi|239748599 PREDICTED: hypothetical protein XP_002346728 [Homo
sapiens]
Length = 285
Score = 32.3 bits (72), Expect = 0.33
Identities = 40/151 (26%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 29 ESREHRPPWMPG---RRECCCLWTLRRKEHCCLWTPARKKHQPPVDPEKEGALPPVDAGK 85
ES PW PG C W+L + + A + QPP + GA+ + +
Sbjct: 81 ESATSGYPWAPGYCTTERCKPNWSLLKAS----FQGAASQTQPPAISQSPGAMQIISSVL 136
Query: 86 EAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKS-----KLFFQSSVSPTSSSFPLRVP 140
+ + G G P +PSP LL PR S + + + S SSS +P
Sbjct: 137 QTRVSLC--GCSGHPAPASFPPLPSPSLLRPRPSSCRGRGQCWVPHAYSDRSSSSLHLLP 194
Query: 141 VGVLHPQSTVQEPRIHGRPRATARQIIRSLL 171
P ++ P GR RA R ++R+L+
Sbjct: 195 ----PPAASSLFP---GRARAPGRAVLRALV 218
>gi|239742616 PREDICTED: hypothetical protein XP_002342550 [Homo
sapiens]
Length = 285
Score = 32.3 bits (72), Expect = 0.33
Identities = 40/151 (26%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 29 ESREHRPPWMPG---RRECCCLWTLRRKEHCCLWTPARKKHQPPVDPEKEGALPPVDAGK 85
ES PW PG C W+L + + A + QPP + GA+ + +
Sbjct: 81 ESATSGYPWAPGYCTTERCKPNWSLLKAS----FQGAASQTQPPAISQSPGAMQIISSVL 136
Query: 86 EAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKS-----KLFFQSSVSPTSSSFPLRVP 140
+ + G G P +PSP LL PR S + + + S SSS +P
Sbjct: 137 QTRVSLC--GCSGHPAPASFPPLPSPSLLRPRPSSCRGRGQCWVPHAYSDRSSSSLHLLP 194
Query: 141 VGVLHPQSTVQEPRIHGRPRATARQIIRSLL 171
P ++ P GR RA R ++R+L+
Sbjct: 195 ----PPAASSLFP---GRARAPGRAVLRALV 218
>gi|46487911 zinc finger protein 406 isoform ZFAT-1 [Homo sapiens]
Length = 1243
Score = 32.3 bits (72), Expect = 0.33
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 9/154 (5%)
Query: 73 EKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSP--RLLHPRAKSKLF----FQS 126
E+E AL V+A KE A P +EG P PG +P+P L P+A+S ++
Sbjct: 520 EEEFALQGVNALKEEACPGDTQLEEGRKEPEAPGEMPAPAVHLASPQAESTALPPCELET 579
Query: 127 SVSPTSSSFPLRVPVGVLHPQSTVQEPRIHGRPRATARQIIRSLLDIWGFQLSVFIKDTV 186
+V +S V ++ H P RS + G +++ +
Sbjct: 580 TVVSSSDLHSQEVVSDDFLLKNDTSSAEAHAAPEKPPDMQHRSSVQTQGEVITLLLSKAQ 639
Query: 187 SA-PGQRLLWSSSPRTSG--VKFCSQLRPCPGRC 217
SA Q + SP G + S P P RC
Sbjct: 640 SAGSDQESHGAQSPLGEGQNMAVLSAGDPDPSRC 673
>gi|71480169 zinc finger protein 406 isoform TR-ZFAT [Homo sapiens]
Length = 846
Score = 32.3 bits (72), Expect = 0.33
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 9/154 (5%)
Query: 73 EKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSP--RLLHPRAKSKLF----FQS 126
E+E AL V+A KE A P +EG P PG +P+P L P+A+S ++
Sbjct: 508 EEEFALQGVNALKEEACPGDTQLEEGRKEPEAPGEMPAPAVHLASPQAESTALPPCELET 567
Query: 127 SVSPTSSSFPLRVPVGVLHPQSTVQEPRIHGRPRATARQIIRSLLDIWGFQLSVFIKDTV 186
+V +S V ++ H P RS + G +++ +
Sbjct: 568 TVVSSSDLHSQEVVSDDFLLKNDTSSAEAHAAPEKPPDMQHRSSVQTQGEVITLLLSKAQ 627
Query: 187 SA-PGQRLLWSSSPRTSG--VKFCSQLRPCPGRC 217
SA Q + SP G + S P P RC
Sbjct: 628 SAGSDQESHGAQSPLGEGQNMAVLSAGDPDPSRC 661
>gi|71143119 signal-induced proliferation-associated 1 like 3 [Homo
sapiens]
Length = 1781
Score = 32.3 bits (72), Expect = 0.33
Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 23/144 (15%)
Query: 61 PARKKHQPPVDPEKEGALPPVDAG---KEAALPPVD----PGKEGALRPVVPGCVPSPRL 113
PAR++HQ P P GA P +G K++ + + G++ LR + PG +P P
Sbjct: 1585 PARRQHQHPHPPVGPGATPAAGSGFPEKKSTISASELSLADGRDRPLRRLDPGLMPLPDT 1644
Query: 114 LHPRAKSKLFFQS---SVSPTSSSFPLRVPVGVLHPQSTVQEPRIHGR---------PRA 161
S L + V S F L P L P +H PR
Sbjct: 1645 AAGLEWSSLVNAAKAYEVQRAVSLFSLNDP--ALSPDIPPAHSPVHSHLSLERGPPTPRT 1702
Query: 162 TARQIIRSLLDIWG--FQLSVFIK 183
T LD+ G +QL V +K
Sbjct: 1703 TPTMSEEPPLDLTGKVYQLEVMLK 1726
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 32.3 bits (72), Expect = 0.33
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 21/92 (22%)
Query: 68 PPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKSKLFFQSS 127
P V P G PP G P V P + P PG P+ +HP+A
Sbjct: 341 PGVHPPAPGVHPPAP-GVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPG------- 392
Query: 128 VSPTSSSFPLRVPVGVLHPQSTVQEPRIHGRP 159
+ P +HPQ+ P +H +P
Sbjct: 393 ---------VHPPAPGMHPQA----PGVHPQP 411
Score = 30.8 bits (68), Expect = 0.95
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 61 PARKKHQPP---VDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPR 117
PA H PP V P+ G P A A P V P G + P PG P P +HP
Sbjct: 360 PAPGVHPPPSAGVHPQAPGVHPAAPAVHPQA-PGVHPPAPG-MHPQAPGVHPQPPGVHPS 417
Query: 118 A 118
A
Sbjct: 418 A 418
Score = 28.9 bits (63), Expect = 3.6
Identities = 27/95 (28%), Positives = 33/95 (34%), Gaps = 8/95 (8%)
Query: 68 PPVDPEKEGA-----LPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKSKL 122
PP P G LPP G P V P G + P PG P +HP A
Sbjct: 265 PPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASG-VHPPAPGVHPPAPGVHPPAPGVH 323
Query: 123 FFQSSVSPTSSSFPLRVPVGVLHPQSTVQEPRIHG 157
S V P + + P +HP + P G
Sbjct: 324 PPTSGVHPPAPG--VHPPAPGVHPPAPGVHPPAPG 356
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 31.2 bits (69), Expect = 0.73
Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 67 QPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKSKLFFQS 126
+PP P G LP A + A+PPV PG P PG + R L P K L Q
Sbjct: 35 KPPSAPAGGGQLPAAGAARSTAVPPV-PGPGPGPGP-GPGPGSTSRRLDP--KEPLGNQR 90
Query: 127 SVSPTSSSFPLRVP 140
+ SPT P
Sbjct: 91 AASPTPKQASATTP 104
>gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo
sapiens]
Length = 1074
Score = 31.2 bits (69), Expect = 0.73
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Query: 31 REHRPPWMPGRRECCCLWTLRRKEHCCLWTPARKKHQPPVDPEKEGALPPVDAGKEAALP 90
R R P P R E + + R +E TP + P+ E LPP + P
Sbjct: 170 RNRRHPRSPPRSELSLI-SSRGEEAIPSPTPRAEPFSANGSPQTE--LPPTELSVHTPSP 226
Query: 91 PVDP-GKEGALRPVVPGCVPSPRLLHPRAKS 120
+P E A V P P+P HPRA++
Sbjct: 227 QAEPLSPETAQTEVAPRTRPAPLRHHPRAQA 257
>gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform b [Homo sapiens]
Length = 2347
Score = 31.2 bits (69), Expect = 0.73
Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 67 QPPVDPEKEGA--LPPVDAGKEAALPPVD-PGKEGALRPVVPGCVPSPRLLHP------R 117
+PP+ E GA P + A K + + P RPVVP P PR L
Sbjct: 1892 RPPLPQESPGARDAPNLVARKVSVSRMLSLPNDSYMFRPVVPASAPHPRPLQEVEMETYG 1951
Query: 118 AKSKLFFQSSV--SPTSSSFPLRVPVGVLHPQSTVQEPRIHGRPRATAR 164
A + L +SV P S L++P+ V P + EP PR TAR
Sbjct: 1952 AGTPLGSVASVHSPPAESCASLQIPLAVSSPARS-GEPLHALSPRGTAR 1999
>gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform a [Homo sapiens]
Length = 2353
Score = 31.2 bits (69), Expect = 0.73
Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 67 QPPVDPEKEGA--LPPVDAGKEAALPPVD-PGKEGALRPVVPGCVPSPRLLHP------R 117
+PP+ E GA P + A K + + P RPVVP P PR L
Sbjct: 1898 RPPLPQESPGARDAPNLVARKVSVSRMLSLPNDSYMFRPVVPASAPHPRPLQEVEMETYG 1957
Query: 118 AKSKLFFQSSV--SPTSSSFPLRVPVGVLHPQSTVQEPRIHGRPRATAR 164
A + L +SV P S L++P+ V P + EP PR TAR
Sbjct: 1958 AGTPLGSVASVHSPPAESCASLQIPLAVSSPARS-GEPLHALSPRGTAR 2005
>gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo
sapiens]
Length = 877
Score = 31.2 bits (69), Expect = 0.73
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Query: 31 REHRPPWMPGRRECCCLWTLRRKEHCCLWTPARKKHQPPVDPEKEGALPPVDAGKEAALP 90
R R P P R E + + R +E TP + P+ E LPP + P
Sbjct: 170 RNRRHPRSPPRSELSLI-SSRGEEAIPSPTPRAEPFSANGSPQTE--LPPTELSVHTPSP 226
Query: 91 PVDP-GKEGALRPVVPGCVPSPRLLHPRAKS 120
+P E A V P P+P HPRA++
Sbjct: 227 QAEPLSPETAQTEVAPRTRPAPLRHHPRAQA 257
>gi|24431975 hypothetical protein LOC26148 [Homo sapiens]
Length = 1247
Score = 31.2 bits (69), Expect = 0.73
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 7 PRGSHLFPSSQDSGGGTSPGTLESREHRPPWMPGRRE 43
P+ HL PS++ GG S + SR H PP + R E
Sbjct: 355 PQDCHLLPSTESFSGGVSEDVI-SRPHSPPEIVSREE 390
>gi|157311635 FAM83H [Homo sapiens]
Length = 1179
Score = 30.8 bits (68), Expect = 0.95
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKS 120
P R+ P PE+ G+L +G+ P + G G + + G + +LL P+ +
Sbjct: 920 PERRSSPVPPVPERRGSLTLTISGESPKAGPAEEGPSGPMEVLRKGSLRLRQLLSPKGER 979
Query: 121 KL 122
++
Sbjct: 980 RM 981
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 30.8 bits (68), Expect = 0.95
Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Query: 60 TPARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAK 119
+P K PP P + P +G P G +P+ P P P P
Sbjct: 308 SPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPI-PSVSPGPWKPTPSVS 366
Query: 120 SKLFFQSSVSPTSSSFPLRVP 140
S + SSVSP+S P P
Sbjct: 367 SASWKSSSVSPSSWKSPPASP 387
Score = 29.6 bits (65), Expect = 2.1
Identities = 24/80 (30%), Positives = 29/80 (36%), Gaps = 12/80 (15%)
Query: 61 PARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKS 120
P +K P + PE A+PPV PP L P + SP L P
Sbjct: 395 PELRKTAPTLSPEHWKAVPPVSPELRKPGPP--------LSPEIRSPAGSPELRKPSGSP 446
Query: 121 KLF----FQSSVSPTSSSFP 136
L+ Q SP S FP
Sbjct: 447 DLWKLSPDQRKTSPASLDFP 466
Score = 29.3 bits (64), Expect = 2.8
Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 10/140 (7%)
Query: 7 PRGSHLFPSSQDSGGGTSPGTLESREHRPPWMPGRRECCCLWTLRRKEHCCLWTPARKKH 66
P+ FP + +SP + PW P + ++ +P +K
Sbjct: 227 PQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAA-----SPESRKSARTTSPEPRKP 281
Query: 67 QPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPSPRLLHPRAKSKLFFQS 126
P PE P V P V P G+ +P PG P P +P A S + +
Sbjct: 282 SPSESPEPWKPFPAVSPEPRRPAPAVSP---GSWKPGPPGS-PRPWKSNPSASSGPWKPA 337
Query: 127 SVSPTSSSFPLRVPVGVLHP 146
+P+ S P + P+ + P
Sbjct: 338 KPAPSVSPGPWK-PIPSVSP 356
>gi|17511255 poly(A) binding protein interacting protein 1 isoform 1
[Homo sapiens]
Length = 479
Score = 30.8 bits (68), Expect = 0.95
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 63 RKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKE-----GALRPVVPGCVPS---PRLL 114
R +HQPP P+ G L P + PP PG + RP PG +P P
Sbjct: 40 RARHQPP-QPKAPGFLQPPPLRQPRTTPP--PGAQCEVPASPQRPSRPGALPEQTRPLRA 96
Query: 115 HPRAKSKLFFQSSVSPTSSSFPLRVPVGVLHPQSTVQEPRIH 156
P ++ K+ Q+S S + P V VL + +V P +
Sbjct: 97 PPSSQDKIPQQNSESAMAK--PQVVVAPVLMSKLSVNAPEFY 136
>gi|158534059 formin binding protein 4 [Homo sapiens]
Length = 1017
Score = 30.8 bits (68), Expect = 0.95
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Query: 48 WTLRRKEHCCLWTPARKKHQPPVDPEKEGALPPVDA---GKEAALPPVDPGKEGALRPVV 104
WTL + L P + PP P E PP ++ + V+ EG+ P
Sbjct: 693 WTLLQSNVPVLQPPLPLEMPPPPPPPPESPPPPPPPPPPAEDGEIQEVEMEDEGSEEPPA 752
Query: 105 PGCVPSPRLLHPRAKSKLFFQSSVSPTSSS 134
PG L + + QSSV T SS
Sbjct: 753 PGTEEDTPLKPSAQTTVVTSQSSVDSTISS 782
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 30.4 bits (67), Expect = 1.2
Identities = 30/105 (28%), Positives = 37/105 (35%), Gaps = 21/105 (20%)
Query: 58 LWTPARKKHQPPVDPEKEGALPPVDAGKEAALPPVD-PGKEGALRPVVPGCVPSPRLLHP 116
L P PP+ P A PP A A PP+ P A P+ P P PR
Sbjct: 704 LQVPPSPPASPPMSPS---ATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPR---- 756
Query: 117 RAKSKLFFQSSVSPTSSSFPLRVPVGVLHPQSTVQEPRIHGRPRA 161
V P ++ PL+VP P S P P+A
Sbjct: 757 -----------VPPLLAAPPLQVPPS--PPASLPMSPLAKPPPQA 788
>gi|197333868 T-box 2 [Homo sapiens]
Length = 712
Score = 30.0 bits (66), Expect = 1.6
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 51 RRKEHCCLWTPARKKHQPPVDPEKEGALPPVDAGKEAALPPVDPGKEGALRPVVPGCVPS 110
RR++ L P+ + ++ PE++GA ++ + PP P +E P PG PS
Sbjct: 292 RREKRKQLTLPSLRLYEEHCKPERDGA----ESDASSCDPP--PAREP---PTSPGAAPS 342
Query: 111 PRLLH-PRAKSK 121
P LH RA+ K
Sbjct: 343 PLRLHRARAEEK 354
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 30.0 bits (66), Expect = 1.6
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 14/78 (17%)
Query: 61 PARKKHQPPVDPE---KEGALPPVDA-----GKEAALPPVDPGKEGALRPVVPGCVPSPR 112
P+ H P + P + A P +A EA PP P EGA P GCVP
Sbjct: 6811 PSPVTHSPLLHPRGFLRPSASLPEEAEASERSTEAPAPPASP--EGAGPPAAQGCVPR-- 6866
Query: 113 LLHPRAKSKLFFQSSVSP 130
H +S + Q+ SP
Sbjct: 6867 --HSVIRSLFYHQAGESP 6882
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,612,808
Number of Sequences: 37866
Number of extensions: 640049
Number of successful extensions: 2642
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 2525
Number of HSP's gapped (non-prelim): 205
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.