Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169210247
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169210247 PREDICTED: similar to hCG2041551 [Homo sapiens]
(289 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169210247 PREDICTED: similar to hCG2041551 [Homo sapiens] 588 e-168
gi|169210132 PREDICTED: similar to hCG2041551 [Homo sapiens] 391 e-109
gi|239756558 PREDICTED: similar to vomeronasal 1 receptor, C3 [H... 172 2e-43
gi|169210430 PREDICTED: similar to vomeronasal 1 receptor, C3 [H... 172 2e-43
gi|239745522 PREDICTED: similar to vomeronasal 1 receptor, C3 [H... 172 2e-43
gi|27777675 vomeronasal 1 receptor 5 [Homo sapiens] 101 9e-22
gi|169165489 PREDICTED: similar to vomeronasal 1 receptor, A5 [H... 92 5e-19
gi|155029529 vomeronasal 1 receptor 2 [Homo sapiens] 72 4e-13
gi|10190668 vomeronasal 1 receptor 1 [Homo sapiens] 71 1e-12
gi|71361647 vomeronasal 1 receptor 4 [Homo sapiens] 59 4e-09
gi|10880131 5-hydroxytryptamine receptor 7 isoform b [Homo sapiens] 38 0.012
gi|10880129 5-hydroxytryptamine receptor 7 isoform d [Homo sapiens] 38 0.012
gi|4504547 5-hydroxytryptamine receptor 7 isoform a [Homo sapiens] 38 0.012
gi|219689113 two pore segment channel 1 isoform 1 [Homo sapiens] 33 0.38
gi|29725622 two pore segment channel 1 isoform 2 [Homo sapiens] 33 0.38
gi|88758613 CD93 antigen precursor [Homo sapiens] 31 1.4
gi|169173357 PREDICTED: hypothetical protein [Homo sapiens] 30 3.2
gi|223633986 trace amine associated receptor 5 [Homo sapiens] 30 3.2
gi|24497453 nucleoporin 88kDa [Homo sapiens] 30 3.2
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma... 29 4.2
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma... 29 4.2
gi|74048545 leucine carboxyl methyltransferase 1 isoform b [Homo... 29 4.2
gi|110618256 trace amine associated receptor 9 [Homo sapiens] 29 4.2
gi|189011544 ubiquitously transcribed tetratricopeptide repeat, ... 28 7.2
gi|157364957 pancreatic polypeptide receptor 1 [Homo sapiens] 28 7.2
gi|28882035 taste receptor, type 2, member 19 [Homo sapiens] 28 7.2
gi|9789897 leukotriene B4 receptor 2 [Homo sapiens] 28 9.4
gi|4505151 Meis homeobox 1 [Homo sapiens] 28 9.4
gi|61966697 asparagine-linked glycosylation 10 homolog B [Homo s... 28 9.4
gi|155722990 solute carrier family 4 (anion exchanger), member 1... 28 9.4
>gi|169210247 PREDICTED: similar to hCG2041551 [Homo sapiens]
Length = 289
Score = 588 bits (1517), Expect = e-168
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 1 MKQISTKFLLMDSKVFFVEDIMPDQEDSRSLRNMADRARGRREQMPEPRWDTAQCYSHGH 60
MKQISTKFLLMDSKVFFVEDIMPDQEDSRSLRNMADRARGRREQMPEPRWDTAQCYSHGH
Sbjct: 1 MKQISTKFLLMDSKVFFVEDIMPDQEDSRSLRNMADRARGRREQMPEPRWDTAQCYSHGH 60
Query: 61 PGRNVNRETCQKGQCLSERGPCHILFLASPSLCRGTEAKSTLHLGIGHRSCSPDGEMAVS 120
PGRNVNRETCQKGQCLSERGPCHILFLASPSLCRGTEAKSTLHLGIGHRSCSPDGEMAVS
Sbjct: 61 PGRNVNRETCQKGQCLSERGPCHILFLASPSLCRGTEAKSTLHLGIGHRSCSPDGEMAVS 120
Query: 121 STGWGQKVLLTIALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGML 180
STGWGQKVLLTIALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGML
Sbjct: 121 STGWGQKVLLTIALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGML 180
Query: 181 LIVVFLASPDLFESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSA 240
LIVVFLASPDLFESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSA
Sbjct: 181 LIVVFLASPDLFESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSA 240
Query: 241 RIKQKFKGYIFHSFFFLWVLSLSLSSNLLSSTVASSNGTKTVVLSISKY 289
RIKQKFKGYIFHSFFFLWVLSLSLSSNLLSSTVASSNGTKTVVLSISKY
Sbjct: 241 RIKQKFKGYIFHSFFFLWVLSLSLSSNLLSSTVASSNGTKTVVLSISKY 289
>gi|169210132 PREDICTED: similar to hCG2041551 [Homo sapiens]
Length = 222
Score = 391 bits (1005), Expect = e-109
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 95 GTEAKSTLHLGIGHRSCSPDGEMAVSSTGWGQKVLLTIALLFQAGIGLRANNFLLFFQIF 154
GTEAKSTLHLGIGHRSCSPDGEMAVSSTGWGQKVLLTIALLFQAGIGLRANNFLLFFQIF
Sbjct: 28 GTEAKSTLHLGIGHRSCSPDGEMAVSSTGWGQKVLLTIALLFQAGIGLRANNFLLFFQIF 87
Query: 155 SLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLFESLYFQNDFKCKAFFCMHRVMR 214
SLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLFESLYFQNDFKCKAFFCMHRVMR
Sbjct: 88 SLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLFESLYFQNDFKCKAFFCMHRVMR 147
Query: 215 SLSICTTCLLSMLQAVAISPGTSWSARIKQKFKGYIFHSFFFLWVLSLSLSSNLLSSTVA 274
SLSICTTCLLSMLQAVAISPGTSWSARIKQKFKGYIFHSFFFLWVLSLSLSSNLLSSTVA
Sbjct: 148 SLSICTTCLLSMLQAVAISPGTSWSARIKQKFKGYIFHSFFFLWVLSLSLSSNLLSSTVA 207
Query: 275 SSNGTKTVVLSISKY 289
SSNGTKTVVLSISKY
Sbjct: 208 SSNGTKTVVLSISKY 222
>gi|239756558 PREDICTED: similar to vomeronasal 1 receptor, C3 [Homo
sapiens]
Length = 275
Score = 172 bits (437), Expect = 2e-43
Identities = 88/147 (59%), Positives = 104/147 (70%)
Query: 133 ALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLF 192
A +FQAGIG AN FLLFF IF+LL + RPKP D +TCHLAL+H+ MLL V D+F
Sbjct: 13 AFVFQAGIGFSANTFLLFFHIFTLLLNRRPKPRDLLTCHLALIHIQMLLTAVDFLPLDIF 72
Query: 193 ESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIKQKFKGYIFH 252
ESL+F NDFKCKA F +R M+ LSICTTCLL+MLQA++ISP TSW AR K K YI H
Sbjct: 73 ESLHFGNDFKCKALFYTNRAMKGLSICTTCLLNMLQAISISPSTSWLARFKHKSTNYILH 132
Query: 253 SFFFLWVLSLSLSSNLLSSTVASSNGT 279
FFF +LS SS + +V SSN T
Sbjct: 133 VFFFWVCFNLSFSSWPIFFSVHSSNTT 159
>gi|169210430 PREDICTED: similar to vomeronasal 1 receptor, C3 [Homo
sapiens]
Length = 275
Score = 172 bits (437), Expect = 2e-43
Identities = 88/147 (59%), Positives = 104/147 (70%)
Query: 133 ALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLF 192
A +FQAGIG AN FLLFF IF+LL + RPKP D +TCHLAL+H+ MLL V D+F
Sbjct: 13 AFVFQAGIGFSANTFLLFFHIFTLLLNRRPKPRDLLTCHLALIHIQMLLTAVDFLPLDIF 72
Query: 193 ESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIKQKFKGYIFH 252
ESL+F NDFKCKA F +R M+ LSICTTCLL+MLQA++ISP TSW AR K K YI H
Sbjct: 73 ESLHFGNDFKCKALFYTNRAMKGLSICTTCLLNMLQAISISPSTSWLARFKHKSTNYILH 132
Query: 253 SFFFLWVLSLSLSSNLLSSTVASSNGT 279
FFF +LS SS + +V SSN T
Sbjct: 133 VFFFWVCFNLSFSSWPIFFSVHSSNTT 159
>gi|239745522 PREDICTED: similar to vomeronasal 1 receptor, C3 [Homo
sapiens]
Length = 275
Score = 172 bits (437), Expect = 2e-43
Identities = 88/147 (59%), Positives = 104/147 (70%)
Query: 133 ALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLF 192
A +FQAGIG AN FLLFF IF+LL + RPKP D +TCHLAL+H+ MLL V D+F
Sbjct: 13 AFVFQAGIGFSANTFLLFFHIFTLLLNRRPKPRDLLTCHLALIHIQMLLTAVDFLPLDIF 72
Query: 193 ESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIKQKFKGYIFH 252
ESL+F NDFKCKA F +R M+ LSICTTCLL+MLQA++ISP TSW AR K K YI H
Sbjct: 73 ESLHFGNDFKCKALFYTNRAMKGLSICTTCLLNMLQAISISPSTSWLARFKHKSTNYILH 132
Query: 253 SFFFLWVLSLSLSSNLLSSTVASSNGT 279
FFF +LS SS + +V SSN T
Sbjct: 133 VFFFWVCFNLSFSSWPIFFSVHSSNTT 159
>gi|27777675 vomeronasal 1 receptor 5 [Homo sapiens]
Length = 357
Score = 101 bits (251), Expect = 9e-22
Identities = 57/135 (42%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 130 LTIALLF--QAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLA 187
+TI + F QA G+ AN LL F IF+ + HR K D I HL+L+H+ +L L
Sbjct: 43 ITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMIISHLSLIHILLLFTQAILV 102
Query: 188 SPDLFESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIKQKFK 247
S D F S Q+D + K +++VMR LSICT CLLS+LQA+ ISP A++K
Sbjct: 103 SLDFFGSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAI-ISPSIFSLAKLKHPSA 161
Query: 248 GYIFHSFFFLWVLSL 262
+I F F WVL++
Sbjct: 162 SHILGFFLFSWVLNM 176
>gi|169165489 PREDICTED: similar to vomeronasal 1 receptor, A5 [Homo
sapiens]
Length = 165
Score = 92.0 bits (227), Expect = 5e-19
Identities = 51/111 (45%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 133 ALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLF 192
A + GIG+ AN LL F I + L HR KP D I CH+AL+H+ +LL F+A+ D+F
Sbjct: 32 AAFSEVGIGISANAMLLLFHILTCLLKHRTKPADLIVCHVALIHIILLLPTEFIAT-DIF 90
Query: 193 ESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIK 243
S ++D K K+ +R+MR LSI TTCLLS+L A+ SP +S A K
Sbjct: 91 GSQDSEDDIKHKSVIYRYRLMRGLSISTTCLLSILPAITCSPRSSCLAVFK 141
>gi|155029529 vomeronasal 1 receptor 2 [Homo sapiens]
Length = 395
Score = 72.4 bits (176), Expect = 4e-13
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 135 LFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLFES 194
LFQ +G+ N LL++ +F + ++P+ TD I HL + ++L + F
Sbjct: 94 LFQVVVGILGNFSLLYYYMFLYFRGYKPRSTDLILRHLTVADSLVILSKRIPETMATFGL 153
Query: 195 LYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIKQKFKGYIFHSF 254
+F N F CK HRV R +SI +TCLLS+ Q + I+P S A +K K YI S
Sbjct: 154 KHFDNYFGCKFLLYAHRVGRGVSIGSTCLLSVFQVITINPRNSRWAEMKVKAPTYIGLSN 213
Query: 255 FFLWVLSLSLSS 266
W + +++
Sbjct: 214 ILCWAFHMLVNA 225
>gi|10190668 vomeronasal 1 receptor 1 [Homo sapiens]
Length = 353
Score = 71.2 bits (173), Expect = 1e-12
Identities = 45/143 (31%), Positives = 68/143 (47%)
Query: 127 KVLLTIALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFL 186
KV I+ L Q G+G+ N+FLL F L H+ +PTD I LAL + +L
Sbjct: 45 KVKSGISFLIQTGVGILGNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMVLFFKGIP 104
Query: 187 ASPDLFESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIKQKF 246
+ F Y ND CK F HRV +S+ T CLL+ QA+ ++P IK +
Sbjct: 105 QTMAAFGLKYLLNDTGCKFVFYYHRVGTRVSLSTICLLNGFQAIKLNPSICRWMEIKIRS 164
Query: 247 KGYIFHSFFFLWVLSLSLSSNLL 269
+I W + +++++L
Sbjct: 165 PRFIDFCCLLCWAPHVLMNASVL 187
>gi|71361647 vomeronasal 1 receptor 4 [Homo sapiens]
Length = 301
Score = 59.3 bits (142), Expect = 4e-09
Identities = 38/129 (29%), Positives = 61/129 (47%)
Query: 134 LLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLFE 193
+L Q +G+ + +L + R + TD I HL + + L + F
Sbjct: 11 ILSQTVVGVLGSFSVLLHYLSFYCTGCRLRSTDLIVKHLIVANFLALRCKGVPQTMAAFG 70
Query: 194 SLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIKQKFKGYIFHS 253
YF N CK F +HRV R +SI TTCLLS+ Q + +S S A++K+K ++ S
Sbjct: 71 VRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSVFQVITVSSRKSRWAKLKEKAPKHVGFS 130
Query: 254 FFFLWVLSL 262
W++ +
Sbjct: 131 VLLCWIVCM 139
>gi|10880131 5-hydroxytryptamine receptor 7 isoform b [Homo sapiens]
Length = 432
Score = 37.7 bits (86), Expect = 0.012
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 163 KPTDPITCHLALVHLGMLLIVV-FLASPDLFESLYFQNDFKCKAFFCMHRVMRSLSICTT 221
+P++ + LAL L + + V+ F++ DL + F C F M + + SI T
Sbjct: 114 QPSNYLIVSLALADLSVAVAVMPFVSVTDLIGGKWIFGHFFCNVFIAMDVMCCTASIMTL 173
Query: 222 CLLSMLQAVAISPGTSWSARIKQKFKGYIFHSFFFLWVLSLSLSSNLLSSTVASSNGTKT 281
C++S+ + + I+ ++ R K + S +W+LS S++ L + N K
Sbjct: 174 CVISIDRYLGITRPLTYPVRQNGKCMAKMILS---VWLLSASITLPPLFGWAQNVNDDKV 230
Query: 282 VVLS 285
++S
Sbjct: 231 CLIS 234
>gi|10880129 5-hydroxytryptamine receptor 7 isoform d [Homo sapiens]
Length = 479
Score = 37.7 bits (86), Expect = 0.012
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 163 KPTDPITCHLALVHLGMLLIVV-FLASPDLFESLYFQNDFKCKAFFCMHRVMRSLSICTT 221
+P++ + LAL L + + V+ F++ DL + F C F M + + SI T
Sbjct: 114 QPSNYLIVSLALADLSVAVAVMPFVSVTDLIGGKWIFGHFFCNVFIAMDVMCCTASIMTL 173
Query: 222 CLLSMLQAVAISPGTSWSARIKQKFKGYIFHSFFFLWVLSLSLSSNLLSSTVASSNGTKT 281
C++S+ + + I+ ++ R K + S +W+LS S++ L + N K
Sbjct: 174 CVISIDRYLGITRPLTYPVRQNGKCMAKMILS---VWLLSASITLPPLFGWAQNVNDDKV 230
Query: 282 VVLS 285
++S
Sbjct: 231 CLIS 234
>gi|4504547 5-hydroxytryptamine receptor 7 isoform a [Homo sapiens]
Length = 445
Score = 37.7 bits (86), Expect = 0.012
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 163 KPTDPITCHLALVHLGMLLIVV-FLASPDLFESLYFQNDFKCKAFFCMHRVMRSLSICTT 221
+P++ + LAL L + + V+ F++ DL + F C F M + + SI T
Sbjct: 114 QPSNYLIVSLALADLSVAVAVMPFVSVTDLIGGKWIFGHFFCNVFIAMDVMCCTASIMTL 173
Query: 222 CLLSMLQAVAISPGTSWSARIKQKFKGYIFHSFFFLWVLSLSLSSNLLSSTVASSNGTKT 281
C++S+ + + I+ ++ R K + S +W+LS S++ L + N K
Sbjct: 174 CVISIDRYLGITRPLTYPVRQNGKCMAKMILS---VWLLSASITLPPLFGWAQNVNDDKV 230
Query: 282 VVLS 285
++S
Sbjct: 231 CLIS 234
>gi|219689113 two pore segment channel 1 isoform 1 [Homo sapiens]
Length = 888
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 148 LLFFQI-FSLLQDH--RPKPTDPITCHLALVHLGMLLIVVFLASPDLFESLYFQNDFKCK 204
LLFF I F++L + P P+DP L + + +++ PD+ Y +N + C
Sbjct: 311 LLFFMIIFAILGFYLFSPNPSDPYFSTLENSIVSLFVLLTTANFPDVMMPSYSRNPWSC- 369
Query: 205 AFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIKQKFKGYIFH 252
FF ++ LSI ++++L AV +++ K+KFK + H
Sbjct: 370 VFFIVY-----LSIELYFIMNLLLAVVFD---TFNDIEKRKFKSLLLH 409
>gi|29725622 two pore segment channel 1 isoform 2 [Homo sapiens]
Length = 816
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 148 LLFFQI-FSLLQDH--RPKPTDPITCHLALVHLGMLLIVVFLASPDLFESLYFQNDFKCK 204
LLFF I F++L + P P+DP L + + +++ PD+ Y +N + C
Sbjct: 239 LLFFMIIFAILGFYLFSPNPSDPYFSTLENSIVSLFVLLTTANFPDVMMPSYSRNPWSC- 297
Query: 205 AFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIKQKFKGYIFH 252
FF ++ LSI ++++L AV +++ K+KFK + H
Sbjct: 298 VFFIVY-----LSIELYFIMNLLLAVVFD---TFNDIEKRKFKSLLLH 337
>gi|88758613 CD93 antigen precursor [Homo sapiens]
Length = 652
Score = 30.8 bits (68), Expect = 1.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 48 PRWDTAQCYSHGHPGRNVNRETCQKGQCLSERGPCHILFLASP 90
P+W C S G PG N+ C+ S +G C L L P
Sbjct: 158 PKWSEGPCGSPGSPGSNIEGFVCK----FSFKGMCRPLALGGP 196
>gi|169173357 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 29.6 bits (65), Expect = 3.2
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 46 PEPRWDTAQCYSHGHPG---RNVNRETCQKG----QCLSERGPCHILFLASPSLCRGTEA 98
P P+ A+ +HGHP R+ +R G QC + G L P + GT
Sbjct: 52 PHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTNP 111
Query: 99 KSTLHLG 105
K + LG
Sbjct: 112 KGSAQLG 118
>gi|223633986 trace amine associated receptor 5 [Homo sapiens]
Length = 337
Score = 29.6 bits (65), Expect = 3.2
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 164 PTDPITCHLALVHLGMLLIVVFLASPDLFESLYFQNDFKCKAFFCMHRVMRSLSICTTCL 223
PT+ + LAL + + L+V+ L++ ES +F DF C+ + + SI C
Sbjct: 68 PTNFLLLSLALADMFLGLLVLPLSTIRSVESCWFFGDFLCRLHTYLDTLFCLTSIFHLCF 127
Query: 224 LSMLQAVAI 232
+S+ + AI
Sbjct: 128 ISIDRHCAI 136
>gi|24497453 nucleoporin 88kDa [Homo sapiens]
Length = 741
Score = 29.6 bits (65), Expect = 3.2
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 9 LLMDSKVFFVEDIMPDQEDSRSLRNMADRARGRREQMPEPRWD 51
LL D K +ED+ +E+ +SLR MA+R + E+ E + D
Sbjct: 593 LLCDQKKKQLEDLSYCREERKSLREMAERLADKYEEAKEKQED 635
>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 29.3 bits (64), Expect = 4.2
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 20 DIMPDQEDSRSLRNMADRARG--RREQMPEPRWDTAQCYSHGHPGRNVNRETCQKGQCLS 77
D++PD+ ++ AD E EP WD Q +SH P ++ R T + Q
Sbjct: 2543 DLLPDERKVQATSLSADSFESLPNTETDREP-WDPVQAFSHAAPAQDRKRRTGELRQFAG 2601
Query: 78 ERGP--CH 83
P CH
Sbjct: 2602 ASEPFICH 2609
>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 29.3 bits (64), Expect = 4.2
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 20 DIMPDQEDSRSLRNMADRARG--RREQMPEPRWDTAQCYSHGHPGRNVNRETCQKGQCLS 77
D++PD+ ++ AD E EP WD Q +SH P ++ R T + Q
Sbjct: 2543 DLLPDERKVQATSLSADSFESLPNTETDREP-WDPVQAFSHAAPAQDRKRRTGELRQFAG 2601
Query: 78 ERGP--CH 83
P CH
Sbjct: 2602 ASEPFICH 2609
>gi|74048545 leucine carboxyl methyltransferase 1 isoform b [Homo
sapiens]
Length = 279
Score = 29.3 bits (64), Expect = 4.2
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 170 CHLALVHLGMLLIVVF--LASPDLFESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSML 227
CH +V+LG + F L DL S YF+ DF +H + + C+L +
Sbjct: 90 CHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEVDFPMIVTRKLHSIKLPTLLIAECVLVYM 149
Query: 228 QAVAISPGTSWSA 240
+ W+A
Sbjct: 150 TPEQSANLLKWAA 162
>gi|110618256 trace amine associated receptor 9 [Homo sapiens]
Length = 348
Score = 29.3 bits (64), Expect = 4.2
Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 8/143 (5%)
Query: 146 NFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLFESLYFQNDFKCKA 205
N L+ I Q H P T+ + LA + + V+ ++ ES ++ D CK
Sbjct: 50 NLLVMIAILHFKQLHTP--TNFLIASLACADFLVGVTVMPFSTVRSVESCWYFGDSYCKF 107
Query: 206 FFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIKQKFKGY-IFHSFFFLWVLSLSL 264
C S+ C +S+ + +A++ ++ + G I S+FF S S
Sbjct: 108 HTCFDTSFCFASLFHLCCISVDRYIAVTDPLTYPTKFTVSVSGICIVLSWFFSVTYSFS- 166
Query: 265 SSNLLSSTVASSNGTKTVVLSIS 287
+ T A+ G + +V++++
Sbjct: 167 ----IFYTGANEEGIEELVVALT 185
>gi|189011544 ubiquitously transcribed tetratricopeptide repeat, X
chromosome [Homo sapiens]
Length = 1401
Score = 28.5 bits (62), Expect = 7.2
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 19/76 (25%)
Query: 102 LHLGIGHRSCSPDGEMAVSSTGWGQKVLLTIALLFQAGIGLRANNFLLFFQIFSLLQDHR 161
LH G S P+GE +SSTG Q L AG G++ N H
Sbjct: 643 LHKGQSSHSAGPNGERPLSSTGPSQH-------LQAAGSGIQNQN------------GHP 683
Query: 162 PKPTDPITCHLALVHL 177
P++ +T AL HL
Sbjct: 684 TLPSNSVTQGAALNHL 699
>gi|157364957 pancreatic polypeptide receptor 1 [Homo sapiens]
Length = 375
Score = 28.5 bits (62), Expect = 7.2
Identities = 27/146 (18%), Positives = 60/146 (41%), Gaps = 8/146 (5%)
Query: 128 VLLTIALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLA 187
V + + + +G+ N L ++ Q + T+ + +LA M L+ L
Sbjct: 42 VFIVTSYSIETVVGVLGN---LCLMCVTVRQKEKANVTNLLIANLAFSDFLMCLLCQPLT 98
Query: 188 SPDLFESLYFQNDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIKQKFK 247
+ + + CK + + ++SI + L+++ + I T W I Q +
Sbjct: 99 AVYTIMDYWIFGETLCKMSAFIQCMSVTVSILSLVLVALERHQLIINPTGWKPSISQAYL 158
Query: 248 GYIFHSFFFLWVLSLSLSSNLLSSTV 273
G + +WV++ LS L++++
Sbjct: 159 GIV-----LIWVIACVLSLPFLANSI 179
>gi|28882035 taste receptor, type 2, member 19 [Homo sapiens]
Length = 299
Score = 28.5 bits (62), Expect = 7.2
Identities = 14/70 (20%), Positives = 33/70 (47%)
Query: 128 VLLTIALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLA 187
++ +I ++F +G AN F+ + + + + I L + +G+L +++FL
Sbjct: 7 IISSILVVFAFVLGNVANGFIALVNVIDWVNTRKISSAEQILTALVVSRIGLLWVMLFLW 66
Query: 188 SPDLFESLYF 197
+F S +
Sbjct: 67 YATVFNSALY 76
>gi|9789897 leukotriene B4 receptor 2 [Homo sapiens]
Length = 389
Score = 28.1 bits (61), Expect = 9.4
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 131 TIALLFQAGIGLRANNFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPD 190
T LL A +GL N F+++ L RP P+ L L HL + V L +P
Sbjct: 55 TAFLLLAALLGLPGNGFVVWS-----LAGWRPARGRPLAATLVL-HLALADGAVLLLTPL 108
Query: 191 LFESLYFQ----NDFKCKAFFCMHRVMRSLSICTTCLLSMLQAVAIS 233
L Q CKA + + + S+ T LLS+ + +A++
Sbjct: 109 FVAFLTRQAWPLGQAGCKAVYYVCALSMYASVLLTGLLSLQRCLAVT 155
>gi|4505151 Meis homeobox 1 [Homo sapiens]
Length = 390
Score = 28.1 bits (61), Expect = 9.4
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 24 DQEDSRSLRNMADRARGRREQMPEPRWDTAQCYSHGHPGRNVNRETCQKGQCLSERGPCH 83
D ED N+ D+ R+ DTA S G PG + T G SE+G
Sbjct: 197 DSEDITRSANLTDQPSWNRDHD-----DTASTRSGGTPGPSSGGHTSHSGDNSSEQGDGL 251
Query: 84 ILFLASPS 91
+ASPS
Sbjct: 252 DNSVASPS 259
>gi|61966697 asparagine-linked glycosylation 10 homolog B [Homo
sapiens]
Length = 473
Score = 28.1 bits (61), Expect = 9.4
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 146 NFLLFFQIFSLLQDHRPKPTDPITCHLALVHLGMLLIVVFLASPDLFESLYFQNDFKCKA 205
+F LFF LL + K + ++ L + L+ VFL + Y D +
Sbjct: 296 SFTLFFSFPHLLSPSKIKTFLSLVWKHGILFLVVTLVSVFLVWKFTYAHKYLLADNRHYT 355
Query: 206 FFCMHRVMRSLSICTTCLLSMLQAVAISPGTSWSARIKQKFKGYIFHSFFFLWVLSLSLS 265
F+ RV + +I L +L I G WS K K ++ FF+ + + +
Sbjct: 356 FYVWKRVFQRYAI----LKYLLVPAYIFAG--WSIADSLKSKPIFWNLMFFICLFIVIVP 409
Query: 266 SNLL 269
LL
Sbjct: 410 QKLL 413
>gi|155722990 solute carrier family 4 (anion exchanger), member 1,
adaptor protein [Homo sapiens]
Length = 796
Score = 28.1 bits (61), Expect = 9.4
Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 21/116 (18%)
Query: 23 PDQEDSRSLRNMADR---------ARGRREQMPEPRWDTAQCYSHGHPGRNVNRETCQKG 73
PD D RSL+ R R EP W G + ET + G
Sbjct: 123 PDCGDFRSLQEEQSRPPTAVSSPGGPARAPPYQEPPWG-------GPATAPYSLETLKGG 175
Query: 74 QCLSER---GPCHILF--LASPSLCRGTEAKSTLHLGIGHRSCSPDGEMAVSSTGW 124
L R G + LF L+ +C + S H + HR+ PDGE + G+
Sbjct: 176 TILGTRSLKGTSYCLFGRLSGCDVCLEHPSVSRYHAVLQHRASGPDGECDSNGPGF 231
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,085,799
Number of Sequences: 37866
Number of extensions: 488509
Number of successful extensions: 1372
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1354
Number of HSP's gapped (non-prelim): 32
length of query: 289
length of database: 18,247,518
effective HSP length: 101
effective length of query: 188
effective length of database: 14,423,052
effective search space: 2711533776
effective search space used: 2711533776
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.