Guide to the Human Genome
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Name: VN1R5 Sequence: fasta or formatted (357aa) NCBI GI: 27777675
Description:

vomeronasal 1 receptor 5

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         17           2
 C cysteine            2.5          9           2
 D aspartate           3.1         11           2
 E glutamate           1.4          5           1
 F phenylalanine      10.1         36           2
 G glycine             3.9         14           2
 H histidine           3.6         13           1
 I isoleucine          9.2         33           2
 K lysine              4.8         17           2
 L leucine            14.6         52           3
 M methionine          2.8         10           1
 N asparagine          3.1         11           1
 P proline             4.5         16           2
 Q glutamine           4.2         15           1
 R arginine            3.1         11           1
 S serine              9.2         33           2
 T threonine           5.0         18           1
 V valine              6.2         22           1
 W tryptophan          1.4          5           1
 Y tyrosine            2.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   vomeronasal 1 receptor 5 
LOC100129315          0.184   PREDICTED: similar to vomeronasal 1 receptor, C3 [H...
LOC100129315          0.183   PREDICTED: similar to vomeronasal 1 receptor, C3 [H...
LOC100129315          0.183   PREDICTED: similar to vomeronasal 1 receptor, C3 [H...
LOC100133928          0.125   PREDICTED: similar to vomeronasal 1 receptor, A5 [H...
LOC100131688          0.110   PREDICTED: similar to hCG2041551 
LOC100131688          0.110   PREDICTED: similar to hCG2041551 
VN1R4                 0.066   vomeronasal 1 receptor 4 
VN1R2                 0.061   vomeronasal 1 receptor 2 
LOC100294489          0.061   PREDICTED: similar to hCG1817096 
VN1R1                 0.058   vomeronasal 1 receptor 1 
FKSG83                0.014   FKSG83 
CACNA1E               0.010   calcium channel, voltage-dependent, R type, alpha 1E...
CACNA1B               0.007   calcium channel, voltage-dependent, N type, alpha 1B ...
HISPPD2A              0.006   histidine acid phosphatase domain containing 2A iso...
HISPPD2A              0.006   histidine acid phosphatase domain containing 2A isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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