Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: VN1R2 Sequence: fasta or formatted (395aa) NCBI GI: 155029529
Description:

vomeronasal 1 receptor 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         25           2
 C cysteine            3.8         15           2
 D aspartate           2.5         10           1
 E glutamate           1.0          4           1
 F phenylalanine       6.3         25           2
 G glycine             4.8         19           1
 H histidine           3.0         12           1
 I isoleucine          5.8         23           2
 K lysine              3.8         15           2
 L leucine            13.4         53           2
 M methionine          2.0          8           1
 N asparagine          4.6         18           3
 P proline             5.1         20           1
 Q glutamine           2.3          9           2
 R arginine            5.1         20           2
 S serine              9.6         38           3
 T threonine           6.1         24           2
 V valine              7.8         31           4
 W tryptophan          1.8          7           2
 Y tyrosine            4.8         19           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   vomeronasal 1 receptor 2 
VN1R4                 0.397   vomeronasal 1 receptor 4 
VN1R1                 0.273   vomeronasal 1 receptor 1 
LOC100129315          0.107   PREDICTED: similar to vomeronasal 1 receptor, C3 [H...
LOC100129315          0.107   PREDICTED: similar to vomeronasal 1 receptor, C3 [H...
LOC100129315          0.107   PREDICTED: similar to vomeronasal 1 receptor, C3 [H...
LOC100131688          0.060   PREDICTED: similar to hCG2041551 
LOC100131688          0.060   PREDICTED: similar to hCG2041551 
VN1R5                 0.054   vomeronasal 1 receptor 5 
LOC100133928          0.043   PREDICTED: similar to vomeronasal 1 receptor, A5 [H...
FKSG83                0.041   FKSG83 
LOC100294489          0.038   PREDICTED: similar to hCG1817096 
BRS3                  0.025   bombesin-like receptor 3 
EDNRB                 0.014   endothelin receptor type B isoform 1 precursor [Hom...
EDNRB                 0.014   endothelin receptor type B isoform 1 precursor 
EDNRB                 0.014   endothelin receptor type B isoform 2 precursor 
APLNR                 0.013   apelin receptor 
GALR1                 0.013   galanin receptor 1 
GPR182                0.013   G protein-coupled receptor 182 
TAS2R41               0.011   taste receptor, type 2, member 41 
GRPR                  0.010   gastrin-releasing peptide receptor 
GPR75                 0.009   G protein-coupled receptor 75 
LOC100293905          0.009   PREDICTED: similar to gastrin-releasing peptide rec...
GPR31                 0.009   G protein-coupled receptor 31 
GPR3                  0.008   G protein-coupled receptor 3 
TAS2R8                0.008   taste receptor, type 2, member 8 
OPRM1                 0.006   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.006   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.006   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.006   opioid receptor, mu 1 isoform MOR-1B2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press