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Search of human proteins with 169210041
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169210041 PREDICTED: hypothetical protein [Homo sapiens]
(237 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169210041 PREDICTED: hypothetical protein [Homo sapiens] 510 e-145
gi|169209545 PREDICTED: hypothetical protein [Homo sapiens] 504 e-143
gi|169210556 PREDICTED: hypothetical protein [Homo sapiens] 504 e-143
gi|239751037 PREDICTED: hypothetical protein [Homo sapiens] 461 e-130
gi|4505777 PHD finger protein 1 isoform a [Homo sapiens] 43 2e-04
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 42 4e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 41 0.001
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 41 0.001
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 41 0.001
gi|24497554 homeobox A13 [Homo sapiens] 40 0.002
gi|110832843 TBP-associated factor 4 [Homo sapiens] 39 0.005
gi|55956910 meningioma 1 [Homo sapiens] 38 0.007
gi|134244285 Notch homolog 3 [Homo sapiens] 37 0.011
gi|40288197 GATA binding protein 6 [Homo sapiens] 37 0.015
gi|171906567 peripheral benzodiazepine receptor-associated prote... 36 0.025
gi|171906559 peripheral benzodiazepine receptor-associated prote... 36 0.025
gi|4507831 Unc-51-like kinase 1 [Homo sapiens] 36 0.033
gi|58331242 formin homology 2 domain containing 3 [Homo sapiens] 36 0.033
gi|58218984 single stranded DNA binding protein 4 isoform b [Hom... 36 0.033
gi|14249150 single stranded DNA binding protein 4 isoform a [Hom... 36 0.033
gi|157384971 cyclin G associated kinase [Homo sapiens] 35 0.043
gi|11037055 sperm associated antigen 4 [Homo sapiens] 35 0.043
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap... 35 0.057
gi|46409372 G protein-coupled receptor 153 [Homo sapiens] 35 0.057
gi|169166217 PREDICTED: hypothetical protein [Homo sapiens] 35 0.074
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 35 0.074
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 35 0.074
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 35 0.074
gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 35 0.074
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 35 0.074
>gi|169210041 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 510 bits (1313), Expect = e-145
Identities = 237/237 (100%), Positives = 237/237 (100%)
Query: 1 MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN
Sbjct: 1 MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
Query: 61 LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS
Sbjct: 61 LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
Query: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGLGLTQPRLSSSLR 180
PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGLGLTQPRLSSSLR
Sbjct: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGLGLTQPRLSSSLR 180
Query: 181 ISWHLLACVATQVGCACRLREKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
ISWHLLACVATQVGCACRLREKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS
Sbjct: 181 ISWHLLACVATQVGCACRLREKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
>gi|169209545 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 504 bits (1298), Expect = e-143
Identities = 235/237 (99%), Positives = 235/237 (99%)
Query: 1 MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN
Sbjct: 1 MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
Query: 61 LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS
Sbjct: 61 LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
Query: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGLGLTQPRLSSSLR 180
PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVS LGLTQPRLSSSLR
Sbjct: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVLGLTQPRLSSSLR 180
Query: 181 ISWHLLACVATQVGCACRLREKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
ISWHLLACVATQVGCACRL EKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS
Sbjct: 181 ISWHLLACVATQVGCACRLTEKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
>gi|169210556 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 504 bits (1298), Expect = e-143
Identities = 235/237 (99%), Positives = 235/237 (99%)
Query: 1 MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN
Sbjct: 1 MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
Query: 61 LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS
Sbjct: 61 LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
Query: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGLGLTQPRLSSSLR 180
PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVS LGLTQPRLSSSLR
Sbjct: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVLGLTQPRLSSSLR 180
Query: 181 ISWHLLACVATQVGCACRLREKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
ISWHLLACVATQVGCACRL EKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS
Sbjct: 181 ISWHLLACVATQVGCACRLTEKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
>gi|239751037 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 461 bits (1185), Expect = e-130
Identities = 221/237 (93%), Positives = 221/237 (93%), Gaps = 6/237 (2%)
Query: 1 MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
MPVHP WLGSACLPH QSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN
Sbjct: 1 MPVHPDWLGSACLPHX------QSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 54
Query: 61 LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
LSPSCPAEAGHGCASTGRQVGVSGAGSSP GPAPCVKCSAWVGTCFPLSLLQAAGGP GS
Sbjct: 55 LSPSCPAEAGHGCASTGRQVGVSGAGSSPPGPAPCVKCSAWVGTCFPLSLLQAAGGPTGS 114
Query: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGLGLTQPRLSSSLR 180
PNGFCPEPWAPDHA TLHGLNKSL QGPRSGGAQRKPRAHTGEGVSGL LTQPRLSSSLR
Sbjct: 115 PNGFCPEPWAPDHASTLHGLNKSLRQGPRSGGAQRKPRAHTGEGVSGLSLTQPRLSSSLR 174
Query: 181 ISWHLLACVATQVGCACRLREKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
ISWHLLACVATQVGCA RLREKTLGEDYVSAFLPSTGPSWAH QTMCKSTRESGRS
Sbjct: 175 ISWHLLACVATQVGCARRLREKTLGEDYVSAFLPSTGPSWAHXGQTMCKSTRESGRS 231
>gi|4505777 PHD finger protein 1 isoform a [Homo sapiens]
Length = 457
Score = 43.1 bits (100), Expect = 2e-04
Identities = 37/107 (34%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 33 VKSPPGDVHAARACAPGR---HSGEGPPQGNLSPSCPAEAGHG-------CASTGRQVGV 82
V+ P GD RA GR GE P G +P AE G A + R G
Sbjct: 339 VEPPTGDGALTRAGPWGRGLTSPGEAPEAGARAPEEEAEGESGGAGATLSSAQSARAPGA 398
Query: 83 SGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGSPNGFCPEPW 129
GAGSS G A +A G P +LL A GP G+ + PW
Sbjct: 399 EGAGSSAEGTA-----AAPSGCLLPSTLLPAPQGPLGTVDPQTGHPW 440
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 42.4 bits (98), Expect = 4e-04
Identities = 46/168 (27%), Positives = 55/168 (32%), Gaps = 30/168 (17%)
Query: 3 VHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSP------------PGDVHAARACAPGR 50
V W S P PA S+ G L+S P P +V R AP
Sbjct: 609 VSETW-ASPLFPAPRPFPAQSSASGSFLLSGWDPEGRGAGETLAGDPAEVLGERGTAPWV 667
Query: 51 HSGEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCS-AWVGTCFPLS 109
E +G+ S G G G S GP PC CS +C PL
Sbjct: 668 EEEEEEEEGS--------------SPGEDSSSLGGGPSRRGPLPCPLCSREGACSCLPLE 713
Query: 110 LLQAAGGPAGSPNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKP 157
A G G P CP P P+ +L SL P + A P
Sbjct: 714 RGDAVAGWGGHPALGCPHP--PEDDSSLRAERGSLADLPMAPPASAPP 759
Score = 30.0 bits (66), Expect = 1.8
Identities = 29/102 (28%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Query: 35 SPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEA-GHGCASTGRQVGVSGAGSSPSGPA 93
+PP + A ++ G GPP P P A AS V+ GS S P
Sbjct: 757 APPEFLDPLMGAAAPQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPG 816
Query: 94 PCVKCSAWVGTCFPLSLLQAAGGPAGSPNGFCPEPWAPDHAP 135
P S + T P S A G + P P AP P
Sbjct: 817 PKPGDSGY-ETETPFSPEGAFPGGGAAEEEGVPRPRAPPEPP 857
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 40.8 bits (94), Expect = 0.001
Identities = 52/187 (27%), Positives = 67/187 (35%), Gaps = 44/187 (23%)
Query: 14 PHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSC----PAEA 69
P P P +SV G +++ PG PP + SPS P A
Sbjct: 586 PRRPPTPGPDTSVSGPRLTLALAPGP----------------PPPPSRSPSSTLSGPDLA 629
Query: 70 GHGCASTGRQVGVSGAGSSPSG-----PAPCVKC-----SAWV-GTCFPLSLLQAAGGP- 117
GH ++T + G S P G P P + +AW G PL+ A G P
Sbjct: 630 GHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPL 689
Query: 118 -------AGSPNGFCP--EPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGL 168
GS +G C E P+ A G +L GP G + K A G G S
Sbjct: 690 PWPPATGPGSADGLCTIYETEGPESATPAPG---ALDPGPSPGTSGGKAAAGAGAGASSR 746
Query: 169 GLTQPRL 175
Q RL
Sbjct: 747 SPKQARL 753
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 40.8 bits (94), Expect = 0.001
Identities = 52/187 (27%), Positives = 67/187 (35%), Gaps = 44/187 (23%)
Query: 14 PHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSC----PAEA 69
P P P +SV G +++ PG PP + SPS P A
Sbjct: 855 PRRPPTPGPDTSVSGPRLTLALAPGP----------------PPPPSRSPSSTLSGPDLA 898
Query: 70 GHGCASTGRQVGVSGAGSSPSG-----PAPCVKC-----SAWV-GTCFPLSLLQAAGGP- 117
GH ++T + G S P G P P + +AW G PL+ A G P
Sbjct: 899 GHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPL 958
Query: 118 -------AGSPNGFCP--EPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGL 168
GS +G C E P+ A G +L GP G + K A G G S
Sbjct: 959 PWPPATGPGSADGLCTIYETEGPESATPAPG---ALDPGPSPGTSGGKAAAGAGAGASSR 1015
Query: 169 GLTQPRL 175
Q RL
Sbjct: 1016 SPKQARL 1022
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 40.8 bits (94), Expect = 0.001
Identities = 52/187 (27%), Positives = 67/187 (35%), Gaps = 44/187 (23%)
Query: 14 PHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSC----PAEA 69
P P P +SV G +++ PG PP + SPS P A
Sbjct: 547 PRRPPTPGPDTSVSGPRLTLALAPGP----------------PPPPSRSPSSTLSGPDLA 590
Query: 70 GHGCASTGRQVGVSGAGSSPSG-----PAPCVKC-----SAWV-GTCFPLSLLQAAGGP- 117
GH ++T + G S P G P P + +AW G PL+ A G P
Sbjct: 591 GHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPL 650
Query: 118 -------AGSPNGFCP--EPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGL 168
GS +G C E P+ A G +L GP G + K A G G S
Sbjct: 651 PWPPATGPGSADGLCTIYETEGPESATPAPG---ALDPGPSPGTSGGKAAAGAGAGASSR 707
Query: 169 GLTQPRL 175
Q RL
Sbjct: 708 SPKQARL 714
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 40.0 bits (92), Expect = 0.002
Identities = 43/165 (26%), Positives = 54/165 (32%), Gaps = 30/165 (18%)
Query: 6 AWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARAC----------APGRHSGEG 55
A G PH PA ++ G V+ + AA C APG S
Sbjct: 51 AGAGGGGFPH----PAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYS 106
Query: 56 PPQGNLSPSCPAEAGHGCASTGRQVGVSGAGS-SPSGPA------PCVKCSAWVGTCFPL 108
G PS A A A+ S +G P+GPA C CSA
Sbjct: 107 SAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSA-------- 158
Query: 109 SLLQAAGGPAGSPNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGA 153
Q++ GPA P G+ + P H C P S A
Sbjct: 159 -AAQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAA 202
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 38.5 bits (88), Expect = 0.005
Identities = 53/183 (28%), Positives = 70/183 (38%), Gaps = 29/183 (15%)
Query: 5 PAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPS 64
P ++G+A P A P+P ++ + PP A P H GPP +
Sbjct: 241 PPFVGAAA-PPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPA-GPPTAAPAVP 298
Query: 65 CPAEAGHG---------CASTGRQVGVS---GAGSSPSGPAPCVKCSA---WVGTCFPLS 109
PA A +G + G GVS G G++ + PAP VK + V P +
Sbjct: 299 PPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAA 358
Query: 110 LLQAAGGPAGSP---------NGFCPEPWA-PDHAP-TLHGLNKSLCQGPRSGGAQRKPR 158
AA GPA + G P P A P AP T GL K G + R P
Sbjct: 359 QTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKG-AAGAVTQSLSRTPT 417
Query: 159 AHT 161
A T
Sbjct: 418 ATT 420
Score = 35.8 bits (81), Expect = 0.033
Identities = 47/178 (26%), Positives = 60/178 (33%), Gaps = 32/178 (17%)
Query: 39 DVHAARACAPGRHSGEGPPQG--NLSPSCPAEAGHGCASTGRQVGVSGAGSS-------- 88
+V AA A A G H G P G P+ PAE G A G + G
Sbjct: 49 EVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPP 108
Query: 89 -------PSGPAPCV-----KCSAWVGTCFPLSLLQA-AGGPAGSPNGFCPEPWAPDHAP 135
P+GPAP G+C P+ A A GP +P G +P P
Sbjct: 109 SPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAG-PAKPAGPAALA 167
Query: 136 TLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGLGLTQPRLSSSLRISWHLLACVATQV 193
G GP G KP +G G Q S+ ++ H A A +
Sbjct: 168 ARAGPGPGPGPGPGPGPGPGKP--------AGPGAAQTLNGSAALLNSHHAAAPAVSL 217
Score = 32.3 bits (72), Expect = 0.37
Identities = 38/144 (26%), Positives = 49/144 (34%), Gaps = 16/144 (11%)
Query: 2 PVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRH-----SGEGP 56
P A G A + G AP+ G ++ PG R P +G P
Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPPPAG-----RARPGGGGPQRPGPPSPRRPLVPAGPAP 121
Query: 57 PQGNLSPSCPAEAGHGCASTGRQVGVS-GAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAG 115
P L P AG CA V+ G +P+GPA +A P
Sbjct: 122 PAAKLRPPPEGSAG-SCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP----GPGP 176
Query: 116 GPAGSPNGFCPEPWAPDHAPTLHG 139
GP P +P P A TL+G
Sbjct: 177 GPGPGPGPGPGKPAGPGAAQTLNG 200
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 38.1 bits (87), Expect = 0.007
Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 36 PPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCASTG---RQVGVSGAGSSPSGP 92
PPGD+ R G + GP +L+P P G G G + + G G P+ P
Sbjct: 638 PPGDLLPRRMGGSGLPADCGPHDPSLAPP-PPPGGSGVLFRGPLQEPMRMPGEGHVPALP 696
Query: 93 APCVKCSAWVGTCFPLSLLQAAGGPAGSPNGFCP-EPWAPDHAPTLHGLNKSLCQGPRSG 151
+P ++ +G L LQ+ G G P+ P PD A + G G G
Sbjct: 697 SPGLQFGGSLG---GLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQ----PGFPFG 749
Query: 152 GAQRKPRAHTGEGVS 166
A R+ H+G GV+
Sbjct: 750 AAGRQSTPHSGPGVN 764
>gi|134244285 Notch homolog 3 [Homo sapiens]
Length = 2321
Score = 37.4 bits (85), Expect = 0.011
Identities = 44/139 (31%), Positives = 52/139 (37%), Gaps = 20/139 (14%)
Query: 48 PGRHSGEGP---PQGNLSPSCPAEAGHGCASTGRQVGVSGAG-SSPSG---------PAP 94
PG H G GP P G P A A G + R G +G G P G P P
Sbjct: 2034 PGPH-GLGPLLCPPGAFLPGLKA-AQSGSKKSRRPPGKAGLGPQGPRGRGKKLTLACPGP 2091
Query: 95 CVKCSAWVGTCFPLSLLQAAGGPAGSPNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQ 154
S + L + GGP SP GF E P A T ++ + GP G
Sbjct: 2092 LADSSVTLSPVDSLDSPRPFGGPPASPGGFPLE--GPYAAATATAVSLAQLGGPGRAGLG 2149
Query: 155 RKPRAHTGEGVSGLGLTQP 173
R+P G V LGL P
Sbjct: 2150 RQP---PGGCVLSLGLLNP 2165
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 37.0 bits (84), Expect = 0.015
Identities = 29/86 (33%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 4 HPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHS-GEGPPQGNLS 62
HP W P AS P S GG + PG +A A R PP N +
Sbjct: 222 HPGW------PQASADSPPYGSGGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGA 275
Query: 63 PSCPAEAGHGCASTGRQVGVSGAGSS 88
P G+ A +G GVSG GSS
Sbjct: 276 AREPG--GYAAAGSGGAGGVSGGGSS 299
Score = 30.0 bits (66), Expect = 1.8
Identities = 42/174 (24%), Positives = 56/174 (32%), Gaps = 29/174 (16%)
Query: 2 PVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQ--- 58
P P + +S GPA +P G VH+A A A + P
Sbjct: 141 PEQPEEMYQTLAALSSQGPAAYDG---------APGGFVHSAAAAAAAAAAASSPVYVPT 191
Query: 59 ---GNLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAG 115
G++ P P + G GAG+ P P + S AAG
Sbjct: 192 TRVGSMLPGLPYHLQGSGSGPANHAG--GAGAHPGWPQASADSPPYG------SGGGAAG 243
Query: 116 GPAGSPNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGLG 169
G A P G A H + S P + GA R+P + G G G
Sbjct: 244 GGAAGPGGAGS---AAAHVSARFPYSPS---PPMANGAAREPGGYAAAGSGGAG 291
>gi|171906567 peripheral benzodiazepine receptor-associated protein 1
isoform b [Homo sapiens]
Length = 1797
Score = 36.2 bits (82), Expect = 0.025
Identities = 46/166 (27%), Positives = 56/166 (33%), Gaps = 25/166 (15%)
Query: 4 HPAWLGSACLPHASHGPAPQSSV--GGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNL 61
HP+ A L AS GP SS + + PPG A +P R +G +
Sbjct: 1033 HPSPEARAPLASASPGPGDPSSPLQHPAPLGTQEPPG----APPASPSREMAKGSHEDPP 1088
Query: 62 SPSCPAEAGHGCASTG--RQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAG 119
+P EAG T R S G GPA P Q A AG
Sbjct: 1089 APCSQEEAGAAVLGTSEERTASTSTLGEKDPGPAA------------PSLAKQEAEWTAG 1136
Query: 120 SPNGFCPEPWAPDHAPTLHGLNKSLCQG--PRSGGAQRKPRAHTGE 163
CP + A N +CQG P SG R + T E
Sbjct: 1137 EA---CPASSSTQGARAQQAPNTEMCQGGDPGSGLRPRAEKEDTAE 1179
>gi|171906559 peripheral benzodiazepine receptor-associated protein 1
isoform a [Homo sapiens]
Length = 1857
Score = 36.2 bits (82), Expect = 0.025
Identities = 46/166 (27%), Positives = 56/166 (33%), Gaps = 25/166 (15%)
Query: 4 HPAWLGSACLPHASHGPAPQSSV--GGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNL 61
HP+ A L AS GP SS + + PPG A +P R +G +
Sbjct: 1093 HPSPEARAPLASASPGPGDPSSPLQHPAPLGTQEPPG----APPASPSREMAKGSHEDPP 1148
Query: 62 SPSCPAEAGHGCASTG--RQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAG 119
+P EAG T R S G GPA P Q A AG
Sbjct: 1149 APCSQEEAGAAVLGTSEERTASTSTLGEKDPGPAA------------PSLAKQEAEWTAG 1196
Query: 120 SPNGFCPEPWAPDHAPTLHGLNKSLCQG--PRSGGAQRKPRAHTGE 163
CP + A N +CQG P SG R + T E
Sbjct: 1197 EA---CPASSSTQGARAQQAPNTEMCQGGDPGSGLRPRAEKEDTAE 1239
>gi|4507831 Unc-51-like kinase 1 [Homo sapiens]
Length = 1050
Score = 35.8 bits (81), Expect = 0.033
Identities = 39/132 (29%), Positives = 52/132 (39%), Gaps = 30/132 (22%)
Query: 50 RHSGEGPPQG--NLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCV----KCSAWVG 103
R SG P G SPS PA A HG + +S G P P+P V + W G
Sbjct: 463 RRSGSTSPLGFARASPSPPAHAEHGGVLARK---MSLGGGRPYTPSPQVGTIPERPGWSG 519
Query: 104 TCFPLSLLQAAGGPAGSPNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGE 163
T P + GG + P AP+H+P GL C R H+
Sbjct: 520 TPSPQGA-EMRGGRSPRPGSS-----APEHSPRTSGLG---C------------RLHSAP 558
Query: 164 GVSGLGLTQPRL 175
+S L + +P+L
Sbjct: 559 NLSDLHVVRPKL 570
>gi|58331242 formin homology 2 domain containing 3 [Homo sapiens]
Length = 1439
Score = 35.8 bits (81), Expect = 0.033
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 11 ACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAG 70
ACL SH P+ S L VS S PG H +A A G+ P+ P A AG
Sbjct: 538 ACLAPLSHSPSSSDSQEALTVSASS-PGTPHHPQASA-----GDPEPESEAEPEAEAGAG 591
Query: 71 HGCASTGRQVGVSGAGS 87
G+ + + G+
Sbjct: 592 QVADEAGQDIASAHEGA 608
>gi|58218984 single stranded DNA binding protein 4 isoform b [Homo
sapiens]
Length = 363
Score = 35.8 bits (81), Expect = 0.033
Identities = 41/153 (26%), Positives = 52/153 (33%), Gaps = 11/153 (7%)
Query: 14 PHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGC 73
P PQS GG+ S G A PG P GN P +
Sbjct: 181 PRGMASVGPQSYGGGMRPPPNSLAGPGLPAMNMGPGVRGPWASPSGNSIP-------YSS 233
Query: 74 ASTGRQVGVSGAGSSPSG---PAPCVKCSAWVGTCFPLSLLQAAGGPAGSPNGFCPE-PW 129
+S G G G G P P+P ++ ++ + G A P G PE P
Sbjct: 234 SSPGSYTGPPGGGGPPGTPIMPSPGDSTNSSENMYTIMNPIGQGAGRANFPLGPGPEGPM 293
Query: 130 APDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTG 162
A A H +N SL G G + P A G
Sbjct: 294 AAMSAMEPHHVNGSLGSGDMDGLPKSSPGAVAG 326
>gi|14249150 single stranded DNA binding protein 4 isoform a [Homo
sapiens]
Length = 385
Score = 35.8 bits (81), Expect = 0.033
Identities = 41/153 (26%), Positives = 52/153 (33%), Gaps = 11/153 (7%)
Query: 14 PHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGC 73
P PQS GG+ S G A PG P GN P +
Sbjct: 203 PRGMASVGPQSYGGGMRPPPNSLAGPGLPAMNMGPGVRGPWASPSGNSIP-------YSS 255
Query: 74 ASTGRQVGVSGAGSSPSG---PAPCVKCSAWVGTCFPLSLLQAAGGPAGSPNGFCPE-PW 129
+S G G G G P P+P ++ ++ + G A P G PE P
Sbjct: 256 SSPGSYTGPPGGGGPPGTPIMPSPGDSTNSSENMYTIMNPIGQGAGRANFPLGPGPEGPM 315
Query: 130 APDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTG 162
A A H +N SL G G + P A G
Sbjct: 316 AAMSAMEPHHVNGSLGSGDMDGLPKSSPGAVAG 348
>gi|157384971 cyclin G associated kinase [Homo sapiens]
Length = 1311
Score = 35.4 bits (80), Expect = 0.043
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 88 SPSG-PAPCVKCSAWVGTCFP---LSLLQAAGGPAGSPNGFCPEPWAPDHAPTLHGLNKS 143
SP G PAPC ++W + P L + G GSP GF P + P A T G +
Sbjct: 1060 SPGGQPAPCGSQASWTKSQNPDPFADLGDLSSGLQGSPAGFPPGGFIPKTATTPKGSSSW 1119
Query: 144 LCQGPRSGGAQRKPRA 159
P + GA P+A
Sbjct: 1120 QTSRPPAQGASWPPQA 1135
>gi|11037055 sperm associated antigen 4 [Homo sapiens]
Length = 437
Score = 35.4 bits (80), Expect = 0.043
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 53 GEGPPQGNLS--PSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSL 110
G G P+G + PSC G S G G + AGSS PAP + W C ++
Sbjct: 43 GPGEPEGRRARGPSC----GEPALSAGVPGGTTWAGSSQQKPAP--RSHNWQTACGAATV 96
Query: 111 LQAAGGPAGSP 121
A P GSP
Sbjct: 97 RGGASEPTGSP 107
>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sapiens]
Length = 2365
Score = 35.0 bits (79), Expect = 0.057
Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 30/180 (16%)
Query: 7 WLGSACLPHASHGP-------APQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQG 59
W P S GP + QS V ++++ GD + +P R + PPQ
Sbjct: 906 WASFPLRPTQSDGPRTSSPSRSKQSEVPWASIALRPTQGD--RPQTSSPSRPAQHDPPQS 963
Query: 60 NLSPS---CPAEA-------GHGCAS-TGRQVGVSGAGSSPSGPAPCVK-CSAWVGTCFP 107
+ P+ P+ A GH S T V + G+ + P P C+ +G
Sbjct: 964 SFGPTQYNLPSRATSSSHNPGHQSTSRTSSPVYPAAYGAPLTSPEPSQPPCAVCIGH--- 1020
Query: 108 LSLLQAAGGPA---GSPNGFCPEPWAPDHAPTLHG---LNKSLCQGPRSGGAQRKPRAHT 161
+A+ P P F PEP AP+ P H + ++C G R P HT
Sbjct: 1021 RDAPRASSPPRYLQHDPFPFFPEPRAPESEPPHHEPPYIPPAVCIGHRDAPRASSPPRHT 1080
>gi|46409372 G protein-coupled receptor 153 [Homo sapiens]
Length = 609
Score = 35.0 bits (79), Expect = 0.057
Identities = 38/140 (27%), Positives = 49/140 (35%), Gaps = 36/140 (25%)
Query: 14 PHASHGPAPQSSVGGLLV-------------SVKSPPGDVHAARACAPGRHSGEG--PPQ 58
P GP P+S+ LL +++ PPG AA A G GE PP
Sbjct: 483 PRRRPGPGPRSASASLLPDAFALTAFECEPQALRRPPGPFPAAPAAPDGADPGEAPTPPS 542
Query: 59 GNLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPA 118
P + H A + R G+S + P G L+AAGG
Sbjct: 543 SAQRSPGPRPSAHSHAGSLRP-GLSASWGEPGG-------------------LRAAGG-G 581
Query: 119 GSPNGFCPEPWAPDHAPTLH 138
GS + F P TLH
Sbjct: 582 GSTSSFLSSPSESSGYATLH 601
>gi|169166217 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 34.7 bits (78), Expect = 0.074
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 49 GRHSGEGPP-QGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVK-CSAWVGTCF 106
GR S + P Q +L P PA G STG QV +G G++ + P P V+ CSA G+
Sbjct: 73 GRLSTKRPERQASLLPR-PAPRG----STGAQVWWAGPGAAAAPPPPGVRQCSALAGSSV 127
Query: 107 PLSLLQAAGGPAGSPNGFCPEPWAPDHAPTLHGLNKSLCQ 146
P GG +GS +P L ++CQ
Sbjct: 128 PWFPGGGGGGGSGSARRALRKPSGGGWKEAARPLGCAVCQ 167
>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
Length = 571
Score = 34.7 bits (78), Expect = 0.074
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 14 PHASHGPAPQSSVGGLLVSVKSPPGDVHA-ARACAPGRHSGEGPPQGNLSPSCPAEAGHG 72
P AS P PQ + G PPG +H A A PG +G P Q + P C G G
Sbjct: 61 PRAS--PPPQGPLPG-------PPGALHRWALAVPPGAVAGPRPQQAS-PPPCGGPGGPG 110
Query: 73 CASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTC 105
G +G + AG +G V + VG C
Sbjct: 111 -GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGC 142
>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 34.7 bits (78), Expect = 0.074
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 14 PHASHGPAPQSSVGGLLVSVKSPPGDVHA-ARACAPGRHSGEGPPQGNLSPSCPAEAGHG 72
P AS P PQ + G PPG +H A A PG +G P Q + P C G G
Sbjct: 61 PRAS--PPPQGPLPG-------PPGALHRWALAVPPGAVAGPRPQQAS-PPPCGGPGGPG 110
Query: 73 CASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTC 105
G +G + AG +G V + VG C
Sbjct: 111 -GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGC 142
>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 34.7 bits (78), Expect = 0.074
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 14 PHASHGPAPQSSVGGLLVSVKSPPGDVHA-ARACAPGRHSGEGPPQGNLSPSCPAEAGHG 72
P AS P PQ + G PPG +H A A PG +G P Q + P C G G
Sbjct: 61 PRAS--PPPQGPLPG-------PPGALHRWALAVPPGAVAGPRPQQAS-PPPCGGPGGPG 110
Query: 73 CASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTC 105
G +G + AG +G V + VG C
Sbjct: 111 -GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGC 142
>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
Length = 567
Score = 34.7 bits (78), Expect = 0.074
Identities = 30/83 (36%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 14 PHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSP--SCPAEAGH 71
P A PA S G +PPG A+A +P + S G P G SP + PA
Sbjct: 15 PSAGASPAQASPAG-------TPPGRASPAQA-SPAQASPAGTPPGRASPAQASPAGTPP 66
Query: 72 GCASTGRQVGVSGAGSSPSGPAP 94
G AS GR S A +SP+ +P
Sbjct: 67 GRASPGR---ASPAQASPAQASP 86
Score = 28.5 bits (62), Expect = 5.3
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 10/55 (18%)
Query: 71 HGCASTGR--QVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGSPNG 123
HG AS R G S A +SP+G P G P A PAG+P G
Sbjct: 6 HGNASPARTPSAGASPAQASPAGTPP--------GRASPAQASPAQASPAGTPPG 52
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 34.7 bits (78), Expect = 0.074
Identities = 41/166 (24%), Positives = 54/166 (32%), Gaps = 27/166 (16%)
Query: 14 PHASHGPAPQSSVGG----------LLVSVKSPPGDVHAA------RACAPGRHSGEGPP 57
P S GP+ SS GG L S PG A + PG + + P
Sbjct: 485 PEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPK 544
Query: 58 QGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGP 117
G P P G G +++ + SG + P +GT GG
Sbjct: 545 PGTSQPMPP---GVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGT 601
Query: 118 AGSPNGFCPEPWAP------DHAPTLHGLNKSLCQGPRSGGAQRKP 157
A +P +P P H PT G Q P G +Q P
Sbjct: 602 AQTPEAGTSQPMPPGMGTSTSHQPTTPG--GGTAQTPEPGTSQPMP 645
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,223,994
Number of Sequences: 37866
Number of extensions: 834380
Number of successful extensions: 3650
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 282
Number of HSP's that attempted gapping in prelim test: 3377
Number of HSP's gapped (non-prelim): 536
length of query: 237
length of database: 18,247,518
effective HSP length: 99
effective length of query: 138
effective length of database: 14,498,784
effective search space: 2000832192
effective search space used: 2000832192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.