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Search of human proteins with 169209574
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169209574 PREDICTED: hypothetical protein LOC400558 [Homo
sapiens]
(241 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169209574 PREDICTED: hypothetical protein LOC400558 [Homo sap... 536 e-153
gi|169210581 PREDICTED: hypothetical protein LOC400558 [Homo sap... 534 e-152
gi|169210101 PREDICTED: hypothetical protein LOC400558 [Homo sap... 534 e-152
gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapi... 50 2e-06
gi|94536830 DMRT-like family C2 [Homo sapiens] 47 1e-05
gi|112421108 capicua homolog [Homo sapiens] 46 3e-05
gi|188536004 zinc finger protein 469 [Homo sapiens] 45 4e-05
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi... 45 7e-05
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 44 1e-04
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 44 1e-04
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 44 1e-04
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 44 1e-04
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 44 1e-04
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 44 1e-04
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 44 1e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 42 4e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 42 6e-04
gi|150170670 piccolo isoform 2 [Homo sapiens] 40 0.001
gi|150378539 piccolo isoform 1 [Homo sapiens] 40 0.001
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.004
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 39 0.004
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 39 0.005
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 39 0.005
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 39 0.005
gi|38201702 telomerase reverse transcriptase isoform 2 [Homo sap... 38 0.007
gi|109633031 telomerase reverse transcriptase isoform 1 [Homo sa... 38 0.007
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 38 0.009
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 38 0.009
gi|7706501 WW domain binding protein 11 [Homo sapiens] 38 0.009
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 37 0.012
>gi|169209574 PREDICTED: hypothetical protein LOC400558 [Homo
sapiens]
Length = 241
Score = 536 bits (1381), Expect = e-153
Identities = 241/241 (100%), Positives = 241/241 (100%)
Query: 1 MAPATDTAWLPPHPEIQLRLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWP 60
MAPATDTAWLPPHPEIQLRLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWP
Sbjct: 1 MAPATDTAWLPPHPEIQLRLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWP 60
Query: 61 QPFWIHSPPLTHSVGTFICLDGLVCALKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPG 120
QPFWIHSPPLTHSVGTFICLDGLVCALKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPG
Sbjct: 61 QPFWIHSPPLTHSVGTFICLDGLVCALKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPG 120
Query: 121 SRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWT 180
SRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWT
Sbjct: 121 SRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWT 180
Query: 181 QPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVTG 240
QPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVTG
Sbjct: 181 QPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVTG 240
Query: 241 L 241
L
Sbjct: 241 L 241
>gi|169210581 PREDICTED: hypothetical protein LOC400558 [Homo
sapiens]
Length = 241
Score = 534 bits (1375), Expect = e-152
Identities = 240/241 (99%), Positives = 240/241 (99%)
Query: 1 MAPATDTAWLPPHPEIQLRLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWP 60
MAPATDTAWLPPHPEIQLRLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWP
Sbjct: 1 MAPATDTAWLPPHPEIQLRLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWP 60
Query: 61 QPFWIHSPPLTHSVGTFICLDGLVCALKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPG 120
QPFWIHSPPLTHSVGTFICLDGLVCAL APGLGVGLTPAPWRPPGQSRMLEGHGPWPTPG
Sbjct: 61 QPFWIHSPPLTHSVGTFICLDGLVCALTAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPG 120
Query: 121 SRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWT 180
SRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWT
Sbjct: 121 SRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWT 180
Query: 181 QPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVTG 240
QPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVTG
Sbjct: 181 QPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVTG 240
Query: 241 L 241
L
Sbjct: 241 L 241
>gi|169210101 PREDICTED: hypothetical protein LOC400558 [Homo
sapiens]
Length = 241
Score = 534 bits (1375), Expect = e-152
Identities = 240/241 (99%), Positives = 240/241 (99%)
Query: 1 MAPATDTAWLPPHPEIQLRLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWP 60
MAPATDTAWLPPHPEIQLRLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWP
Sbjct: 1 MAPATDTAWLPPHPEIQLRLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWP 60
Query: 61 QPFWIHSPPLTHSVGTFICLDGLVCALKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPG 120
QPFWIHSPPLTHSVGTFICLDGLVCAL APGLGVGLTPAPWRPPGQSRMLEGHGPWPTPG
Sbjct: 61 QPFWIHSPPLTHSVGTFICLDGLVCALTAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPG 120
Query: 121 SRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWT 180
SRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWT
Sbjct: 121 SRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWT 180
Query: 181 QPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVTG 240
QPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVTG
Sbjct: 181 QPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVTG 240
Query: 241 L 241
L
Sbjct: 241 L 241
>gi|113429443 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 492
Score = 49.7 bits (117), Expect = 2e-06
Identities = 68/248 (27%), Positives = 84/248 (33%), Gaps = 76/248 (30%)
Query: 33 GSP--SAGPTTQSQPHALRPGLRGRGGWWPQPFWIHSPPLTHSVGTFICLDGLVCALKA- 89
GSP SAGP T A PG +PF +PP GL A A
Sbjct: 215 GSPHNSAGPRTPRLARASPPG---------EPFMRVAPP------------GLAAAAAAR 253
Query: 90 -------PGLG------VGLTPAPWR-PPGQSRMLEGHGPWPTPGSRP-----GPTCVCL 130
PG G +G P P PPG R G G GP+ V L
Sbjct: 254 DSEPGPVPGAGGCGEDRLGSQPRPENGPPGSHRTASGRGLRRGDSEGGVNRGIGPSRVSL 313
Query: 131 LTPASSSLRPCLSDRGTC-PGAPQG------------------------AVGTCRASPQS 165
L P L + RG+ PG P+G A+ A+P+
Sbjct: 314 LAPDKKRLNN--APRGSAAPGPPRGPRLQGGGSLTLQPDYAKYATFKAAALKAAEAAPRD 371
Query: 166 PCHRHPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTA 225
C R P+L P Q SP L + + PW P P P AA+T+
Sbjct: 372 FCQRFPALEPS------PRQPPARAPRPSPDLPAPLDACPWAPPVYAPPAAPGPYAAWTS 425
Query: 226 ANPCPPAP 233
+ P PAP
Sbjct: 426 SRPARPAP 433
>gi|94536830 DMRT-like family C2 [Homo sapiens]
Length = 367
Score = 47.0 bits (110), Expect = 1e-05
Identities = 61/227 (26%), Positives = 83/227 (36%), Gaps = 35/227 (15%)
Query: 12 PHPEIQLRLLCPGETY--GKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPFWIHSPP 69
PH + L PG+ L+ P A P + + + PG G W P F + P
Sbjct: 136 PHGAVLLAPTPPGKNSCGPLLLSHPPEASPLSWTP---VPPGPWVPGHWLPPGFSMPPP- 191
Query: 70 LTHSVGTFICLDGLVCALKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPT-PGSRPGPTCV 128
+VC L V L P P PG S L HGP+ T PGS P T
Sbjct: 192 -------------VVCRLLYQEPAVSLPPFPGFDPGTSLQLPTHGPFTTCPGSHPVLTAP 238
Query: 129 CLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSG-LEWTQPPDQDQ 187
P +P T P G + PQ+ + SG EW + +
Sbjct: 239 LSGEPQGPPSQP--RTHSTLILQPCGTPDPLQLQPQASGASCLARTSGPSEWQLQQEAAE 296
Query: 188 GLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPC-PPAP 233
L+ + +Q P +P PP P W+ + +PC PPAP
Sbjct: 297 ALVG------LKDSSQAPRVTPSVPPNPA-WI----SLLHPCGPPAP 332
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 45.8 bits (107), Expect = 3e-05
Identities = 64/217 (29%), Positives = 83/217 (38%), Gaps = 33/217 (15%)
Query: 32 GGSPSAGPTTQSQPHALRPGLRGRGGWWPQPFWIHSPPLTHSVGTFICLDGLVCALKAPG 91
GGS P P A P + RGG QP + SPP + V + P
Sbjct: 912 GGSAQLLPGKVLVPLAA-PSMSVRGGGAGQPLPLVSPPFSVPVQN---------GAQPPS 961
Query: 92 LGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVC--LLTPASSSLRPCLS------ 143
+ LTP P P G P +P + PGPT +L P+S+ + S
Sbjct: 962 KIIQLTPVPVSTPS------GLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSAGGHAL 1015
Query: 144 DRGTCPGAPQGAVGTCRASPQSPCHRHPSLR-SGLEWTQPPDQDQGLLTPGSPPLVSG-- 200
GT P + Q T S SL SG + QP LL+ G PL++
Sbjct: 1016 PLGTSPASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQP------LLSAGQAPLLAPGQ 1069
Query: 201 VTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASS 237
V +P SP PP G TA PAPT+S+
Sbjct: 1070 VGVSPVPSPQLPPACAAPGGPVITAFYSGSPAPTSSA 1106
Score = 32.7 bits (73), Expect = 0.29
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 188 GLLTPGSPPLVSGVTQTPWTSPFCPPR----PTPWVGAAFTAANPCPPAPTAS 236
G+L PG+ G+TQ + P P + P P AA P PAPT S
Sbjct: 809 GILQPGALGKAGGITQVQYILPTLPQQLQVAPAPAPAPGTKAAAPSGPAPTTS 861
Score = 30.0 bits (66), Expect = 1.9
Identities = 43/176 (24%), Positives = 53/176 (30%), Gaps = 33/176 (18%)
Query: 68 PPLTHSVGTFICLDGLVCALKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTC 127
P L ++V T K P TPAP P P + G
Sbjct: 1116 PSLVYTVATSTTPPAATILPKGPPAPATATPAPTSP--------------FPSATAGSMT 1161
Query: 128 VCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQPPDQDQ 187
L+ P + RP P APQ + P S R G QP
Sbjct: 1162 YSLVAPKAQ--RPS-------PKAPQKVKAAIASIPVGSFEAGASGRPGPAPRQP----- 1207
Query: 188 GLLTPG---SPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVTG 240
L PG P + T P PP P W A ++ PPA +S G
Sbjct: 1208 --LEPGPVREPTAPESELEGQPTPPAPPPLPETWTPTARSSPPLPPPAEERTSAKG 1261
Score = 27.7 bits (60), Expect = 9.3
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 169 RHPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFT--AA 226
R +++ QPP + L P PP + P SP P PT + T AA
Sbjct: 1515 RQKIMQAATPTEQPPGAEAPLPVP--PPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAA 1572
Query: 227 NPCPPAP 233
P PP P
Sbjct: 1573 PPLPPPP 1579
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 45.4 bits (106), Expect = 4e-05
Identities = 44/136 (32%), Positives = 58/136 (42%), Gaps = 12/136 (8%)
Query: 104 PGQSRMLEGHGP--WPT--PGSRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTC 159
PGQ L P WP P +RP P + +L S P + G QGA+GT
Sbjct: 470 PGQRLCLPQSAPLPWPQVLPTARPSPHGMEML-----SRLPFPAGGPEWQGGSQGALGTA 524
Query: 160 RASPQSPCHRHPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPWTSPF-CPPRPTPW 218
+P P + P++RS + G+ PG+ PL GV Q P SP P P P
Sbjct: 525 GKTP-GPREKLPAVRSSQGGSPALFTYNGMTDPGAQPLFFGVAQ-PQVSPHGTPSLPPPR 582
Query: 219 VGAAFTAANPCPPAPT 234
V A + +P P T
Sbjct: 583 VVGASPSESPLPSPAT 598
Score = 33.9 bits (76), Expect = 0.13
Identities = 41/131 (31%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 88 KAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPG-PTCVCLLTPASSSLRPCLSDRG 146
+AP G +P PPG+S + P G G P +L ASS +P L +
Sbjct: 81 QAPSSTPGKRGSPQTPPGRSPL---QAPSRLAGRAEGSPPQRYILGIASSRTKPTLDETP 137
Query: 147 TCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWT--QPPDQDQGLLTPGSPPLVSGVTQT 204
P + +PQ P P LR GL T QP ++ G P S T T
Sbjct: 138 ENPQLEAAQLPEVD-TPQGPGTGAP-LRPGLPRTEAQPAAEELGFHRCFQEP-PSSFTST 194
Query: 205 PWTSPFCPPRP 215
+TSP PRP
Sbjct: 195 NYTSPSATPRP 205
Score = 32.7 bits (73), Expect = 0.29
Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 17/122 (13%)
Query: 102 RPPGQSRMLEGHGPWPTPG---SRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGT 158
+P G +R + G +PG S P P L SL L +R P + Q +G+
Sbjct: 341 QPGGLNRHSDLSGALSSPGAAHSAPRPFSDSL----HKSLTKILPER---PPSAQDGLGS 393
Query: 159 CRASPQSPCHRH---PSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRP 215
R P S RH + R+ T P D L PG PP P +P+ P
Sbjct: 394 TRGPPSSLPQRHFPGQAYRASGVDTSPGPPDTELAAPGPPPARLPQLWDPTAAPY----P 449
Query: 216 TP 217
TP
Sbjct: 450 TP 451
Score = 30.4 bits (67), Expect = 1.4
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 11 PPHPEIQLRLLCPGE----TYGKLMGGSPSAGPTTQSQ-PHALRPGLRGRGGWWPQP 62
P HP + L PGE T + +P A P SQ + RPG + GG PQP
Sbjct: 3668 PVHPRKAVGSLAPGELARGTENGMKPATPKAKPGPSSQGSGSPRPGTKTGGGSQPQP 3724
Score = 29.3 bits (64), Expect = 3.2
Identities = 40/158 (25%), Positives = 52/158 (32%), Gaps = 36/158 (22%)
Query: 19 RLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPFWIHSPPLTHSVGTFI 78
R+LCPG G +G P+ + G RG W P+ T ++G +
Sbjct: 2700 RMLCPGRMDGAALGEQPTG-----------QKGASARGFWGPRE--------TKALG--V 2738
Query: 79 CLDGLVCALKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSL 138
C + G PA SR EG TP P +PA S+
Sbjct: 2739 CKES------------GSEPAEDSSRAHSRSEEGVWEENTPPLGPLGFPETSSSPADSTT 2786
Query: 139 RPCLS---DRGTCPGAPQGAVGTCRASPQSPCHRHPSL 173
CL D G QG G + S PSL
Sbjct: 2787 SSCLQGLPDNPDTQGGVQGPEGPTPDASGSSAKDPPSL 2824
>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 547
Score = 44.7 bits (104), Expect = 7e-05
Identities = 42/127 (33%), Positives = 51/127 (40%), Gaps = 25/127 (19%)
Query: 117 PTP-GSRPGPTCVCLLTPASSSLRPCLSDRGT-CP----GAPQGAVGTC----RASPQSP 166
P P G RP P PA S P S GT CP GA +G C A+P+
Sbjct: 377 PRPSGPRPRPA------PARS---PSQSPAGTPCPVLSLGARRGVTLPCPVPAEAAPRDF 427
Query: 167 CHRHPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAA 226
C R P+L P Q SP L + + PW P P P AA+T++
Sbjct: 428 CQRFPALEPS------PRQPPARAPRPSPDLPAPLDACPWAPPVYAPPAAPGPYAAWTSS 481
Query: 227 NPCPPAP 233
P PAP
Sbjct: 482 RPARPAP 488
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 43.9 bits (102), Expect = 1e-04
Identities = 60/217 (27%), Positives = 75/217 (34%), Gaps = 32/217 (14%)
Query: 24 GETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPF---WIHSPPLTHSVGTFICL 80
G + G M P P + P AL G + RG P PF +H L + + L
Sbjct: 138 GPSSGPQMSSGPGGAPLDGADPQAL--GQQNRG---PTPFNQNQLHQ--LRAQIMAYKML 190
Query: 81 -------DGLVCALKA----PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVC 129
D L A++ PG+ + P PP S G GP P PG PGP
Sbjct: 191 ARGQPLPDHLQMAVQGKRPMPGMQQQMPTLP--PPSVSATGPGPGPGPGPGPGPGPAPPN 248
Query: 130 LLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQP----PDQ 185
P P + G G P G G P P P + + P P Q
Sbjct: 249 YSRPHGMG-GPNMPPPGP-SGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQ 306
Query: 186 DQGLLTPGS---PPLVSGVTQTPWTSPFCPPRPTPWV 219
G +P PP S V SP P +P P V
Sbjct: 307 PTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMV 343
Score = 28.1 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 90 PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPT 126
P G L P+P PG + + G P P P PT
Sbjct: 22 PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPT 58
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 43.9 bits (102), Expect = 1e-04
Identities = 60/217 (27%), Positives = 75/217 (34%), Gaps = 32/217 (14%)
Query: 24 GETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPF---WIHSPPLTHSVGTFICL 80
G + G M P P + P AL G + RG P PF +H L + + L
Sbjct: 138 GPSSGPQMSSGPGGAPLDGADPQAL--GQQNRG---PTPFNQNQLHQ--LRAQIMAYKML 190
Query: 81 -------DGLVCALKA----PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVC 129
D L A++ PG+ + P PP S G GP P PG PGP
Sbjct: 191 ARGQPLPDHLQMAVQGKRPMPGMQQQMPTLP--PPSVSATGPGPGPGPGPGPGPGPAPPN 248
Query: 130 LLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQP----PDQ 185
P P + G G P G G P P P + + P P Q
Sbjct: 249 YSRPHGMG-GPNMPPPGP-SGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQ 306
Query: 186 DQGLLTPGS---PPLVSGVTQTPWTSPFCPPRPTPWV 219
G +P PP S V SP P +P P V
Sbjct: 307 PTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMV 343
Score = 28.1 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 90 PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPT 126
P G L P+P PG + + G P P P PT
Sbjct: 22 PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPT 58
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 43.9 bits (102), Expect = 1e-04
Identities = 60/217 (27%), Positives = 75/217 (34%), Gaps = 32/217 (14%)
Query: 24 GETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPF---WIHSPPLTHSVGTFICL 80
G + G M P P + P AL G + RG P PF +H L + + L
Sbjct: 138 GPSSGPQMSSGPGGAPLDGADPQAL--GQQNRG---PTPFNQNQLHQ--LRAQIMAYKML 190
Query: 81 -------DGLVCALKA----PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVC 129
D L A++ PG+ + P PP S G GP P PG PGP
Sbjct: 191 ARGQPLPDHLQMAVQGKRPMPGMQQQMPTLP--PPSVSATGPGPGPGPGPGPGPGPAPPN 248
Query: 130 LLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQP----PDQ 185
P P + G G P G G P P P + + P P Q
Sbjct: 249 YSRPHGMG-GPNMPPPGP-SGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQ 306
Query: 186 DQGLLTPGS---PPLVSGVTQTPWTSPFCPPRPTPWV 219
G +P PP S V SP P +P P V
Sbjct: 307 PTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMV 343
Score = 28.1 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 90 PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPT 126
P G L P+P PG + + G P P P PT
Sbjct: 22 PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPT 58
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 43.9 bits (102), Expect = 1e-04
Identities = 60/217 (27%), Positives = 75/217 (34%), Gaps = 32/217 (14%)
Query: 24 GETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPF---WIHSPPLTHSVGTFICL 80
G + G M P P + P AL G + RG P PF +H L + + L
Sbjct: 138 GPSSGPQMSSGPGGAPLDGADPQAL--GQQNRG---PTPFNQNQLHQ--LRAQIMAYKML 190
Query: 81 -------DGLVCALKA----PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVC 129
D L A++ PG+ + P PP S G GP P PG PGP
Sbjct: 191 ARGQPLPDHLQMAVQGKRPMPGMQQQMPTLP--PPSVSATGPGPGPGPGPGPGPGPAPPN 248
Query: 130 LLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQP----PDQ 185
P P + G G P G G P P P + + P P Q
Sbjct: 249 YSRPHGMG-GPNMPPPGP-SGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQ 306
Query: 186 DQGLLTPGS---PPLVSGVTQTPWTSPFCPPRPTPWV 219
G +P PP S V SP P +P P V
Sbjct: 307 PTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMV 343
Score = 28.1 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 90 PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPT 126
P G L P+P PG + + G P P P PT
Sbjct: 22 PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPT 58
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 43.9 bits (102), Expect = 1e-04
Identities = 60/217 (27%), Positives = 75/217 (34%), Gaps = 32/217 (14%)
Query: 24 GETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPF---WIHSPPLTHSVGTFICL 80
G + G M P P + P AL G + RG P PF +H L + + L
Sbjct: 138 GPSSGPQMSSGPGGAPLDGADPQAL--GQQNRG---PTPFNQNQLHQ--LRAQIMAYKML 190
Query: 81 -------DGLVCALKA----PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVC 129
D L A++ PG+ + P PP S G GP P PG PGP
Sbjct: 191 ARGQPLPDHLQMAVQGKRPMPGMQQQMPTLP--PPSVSATGPGPGPGPGPGPGPGPAPPN 248
Query: 130 LLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQP----PDQ 185
P P + G G P G G P P P + + P P Q
Sbjct: 249 YSRPHGMG-GPNMPPPGP-SGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQ 306
Query: 186 DQGLLTPGS---PPLVSGVTQTPWTSPFCPPRPTPWV 219
G +P PP S V SP P +P P V
Sbjct: 307 PTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMV 343
Score = 28.1 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 90 PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPT 126
P G L P+P PG + + G P P P PT
Sbjct: 22 PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPT 58
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 43.9 bits (102), Expect = 1e-04
Identities = 60/217 (27%), Positives = 75/217 (34%), Gaps = 32/217 (14%)
Query: 24 GETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPF---WIHSPPLTHSVGTFICL 80
G + G M P P + P AL G + RG P PF +H L + + L
Sbjct: 138 GPSSGPQMSSGPGGAPLDGADPQAL--GQQNRG---PTPFNQNQLHQ--LRAQIMAYKML 190
Query: 81 -------DGLVCALKA----PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVC 129
D L A++ PG+ + P PP S G GP P PG PGP
Sbjct: 191 ARGQPLPDHLQMAVQGKRPMPGMQQQMPTLP--PPSVSATGPGPGPGPGPGPGPGPAPPN 248
Query: 130 LLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQP----PDQ 185
P P + G G P G G P P P + + P P Q
Sbjct: 249 YSRPHGMG-GPNMPPPGP-SGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQ 306
Query: 186 DQGLLTPGS---PPLVSGVTQTPWTSPFCPPRPTPWV 219
G +P PP S V SP P +P P V
Sbjct: 307 PTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMV 343
Score = 28.1 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 90 PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPT 126
P G L P+P PG + + G P P P PT
Sbjct: 22 PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPT 58
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 43.9 bits (102), Expect = 1e-04
Identities = 60/217 (27%), Positives = 75/217 (34%), Gaps = 32/217 (14%)
Query: 24 GETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPF---WIHSPPLTHSVGTFICL 80
G + G M P P + P AL G + RG P PF +H L + + L
Sbjct: 138 GPSSGPQMSSGPGGAPLDGADPQAL--GQQNRG---PTPFNQNQLHQ--LRAQIMAYKML 190
Query: 81 -------DGLVCALKA----PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVC 129
D L A++ PG+ + P PP S G GP P PG PGP
Sbjct: 191 ARGQPLPDHLQMAVQGKRPMPGMQQQMPTLP--PPSVSATGPGPGPGPGPGPGPGPAPPN 248
Query: 130 LLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQP----PDQ 185
P P + G G P G G P P P + + P P Q
Sbjct: 249 YSRPHGMG-GPNMPPPGP-SGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQ 306
Query: 186 DQGLLTPGS---PPLVSGVTQTPWTSPFCPPRPTPWV 219
G +P PP S V SP P +P P V
Sbjct: 307 PTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMV 343
Score = 28.1 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 90 PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPT 126
P G L P+P PG + + G P P P PT
Sbjct: 22 PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPT 58
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.4 bits (98), Expect = 4e-04
Identities = 51/165 (30%), Positives = 66/165 (40%), Gaps = 22/165 (13%)
Query: 88 KAPGLGVGLT-PAPW---RPPGQ------SRMLEGHGPWPTPGSRPGPTCVC-LLTPASS 136
+A G VGL PAP RPP + S E P+P +R P+ L PAS
Sbjct: 172 RAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASR 231
Query: 137 SLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQPPD--QDQGLLTPGS 194
SL S T +P + + R +P++P H GL+ +PP + P
Sbjct: 232 SL----SSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 287
Query: 195 PPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVT 239
PL S TP SP PP P+ P PPA S T
Sbjct: 288 GPLSSSPLATP--SPSAPPSPS---APPSLQTLPSPPATPPSQAT 327
Score = 35.8 bits (81), Expect = 0.034
Identities = 60/215 (27%), Positives = 80/215 (37%), Gaps = 33/215 (15%)
Query: 34 SPSAGPTTQSQPHALRPGLRGRGGWWPQPFWIHSPPLTHSVGTFICLDGLVCALKAPG-L 92
SP A P Q+ P P L+ P P SPPL+ + +AP L
Sbjct: 348 SPLATPPPQAPPALALPPLQAP----PSP--PASPPLSPLATP---------SPQAPNAL 392
Query: 93 GVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPCLSDRGTCPGAP 152
V L AP+ PP + P +P P T P+ ++ P L + P +P
Sbjct: 393 AVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAA--PPLQVPPSPPASP 450
Query: 153 QGAVGTCRASPQSPCHRHPSLRSGLEWTQPPDQ-DQGLLTPGSPPLVSGVTQTPWTSPFC 211
+ + PQ+P P L+ +PP Q L TP L S P +PF
Sbjct: 451 PMSP-SATPPPQAP---PPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFS 506
Query: 212 P-------PRPTPWVGAAFTAANP---CPPAPTAS 236
P P TP A A P PP+P AS
Sbjct: 507 PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPAS 541
Score = 28.9 bits (63), Expect = 4.2
Identities = 60/207 (28%), Positives = 75/207 (36%), Gaps = 34/207 (16%)
Query: 11 PPHPEIQLRLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPFWIHSPPL 70
PP P +Q P SPSA P +Q+ P P L+ P P SPP+
Sbjct: 404 PPSPPVQAPFSPPASP-----PVSPSATPPSQAPPSLAAPPLQVP----PSP--PASPPM 452
Query: 71 THSVGTFICLDGLVCALKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCL 130
+ S L AP L + P P PP + P P P S PG
Sbjct: 453 SPSATP---PPQAPPPLAAPPLQLA-KPPPQAPPALATPPLQALPSP-PASFPGQA---- 503
Query: 131 LTPASSSLRPCLSDRGTCPG-APQGAVGTCRASPQSPCHRHPSLRSGLEWTQPPDQDQGL 189
P S S +S T P AP P SP P+L++ +PP
Sbjct: 504 --PFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSP-PASPTLQAP---RRPP------ 551
Query: 190 LTPGSPPLVSGVTQTPWTSPFCPPRPT 216
TPG VSG T +P PP P+
Sbjct: 552 -TPGPDTSVSGPRLTLALAPGPPPPPS 577
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 41.6 bits (96), Expect = 6e-04
Identities = 72/249 (28%), Positives = 88/249 (35%), Gaps = 38/249 (15%)
Query: 2 APATDTAWLPPHPEIQLRLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQ 61
AP T A PP P+ G L P PTT P A P +G G P
Sbjct: 1125 APTTPAA-TPPSPK------------GGLATPPPKGAPTT---PAATPPSPKG-GLATPP 1167
Query: 62 PFWIHSPPLTHSVGTFICLDGLVCALKAPGLGVGLTPA--PWRPPGQSRMLEGHGPWPTP 119
P P T + GL A +P G TPA P P G G TP
Sbjct: 1168 P---KGAPTTPAATPPSPKGGL--ATPSPK-GAPTTPAATPPSPKGGLATPSPKGAPTTP 1221
Query: 120 GSRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTC--RASPQSPCHRHPSLRSGL 177
+ P L TP S + + P +P+G T + +P P PSL+ GL
Sbjct: 1222 AATPPSPKGGLATP---SPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGL 1278
Query: 178 EWTQPPDQ---DQGLLTPGSP---PLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPP 231
PP + + ++TP SP P S P PP P G P PP
Sbjct: 1279 --ATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPP 1336
Query: 232 APTASSVTG 240
A T S G
Sbjct: 1337 AVTPPSPKG 1345
Score = 37.4 bits (85), Expect = 0.012
Identities = 55/211 (26%), Positives = 67/211 (31%), Gaps = 34/211 (16%)
Query: 34 SPSAGPTTQSQPHALRPGLRGRGGWWPQPFWIHSPPLTHSVGTFICLDGLVCALKAPGLG 93
SP PT P A P +G G P P W +PP A G
Sbjct: 935 SPKGAPTP---PAATPPSPKG-GPATPSPKWAPTPP---------------AATPPSPKG 975
Query: 94 VGLTPAPW---RPPGQSRMLEGHGP-WPTPGSRPGPTCVCLLTPASSSLRPCLSDRGTCP 149
TP+P PP + GP P+P P P V TP S P +
Sbjct: 976 GPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAV---TPPSPKGSPAATP----- 1027
Query: 150 GAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPWTSP 209
P+GA A+P SP + + L P L +P P + P
Sbjct: 1028 -FPKGASTPPAATPPSP--KGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPA 1084
Query: 210 FCPPRPTPWVGAAFTAANPCPPAPTASSVTG 240
PP P P PPA T S G
Sbjct: 1085 ATPPSPKGGPATPSPKGAPMPPAATPPSPKG 1115
Score = 30.4 bits (67), Expect = 1.4
Identities = 42/149 (28%), Positives = 53/149 (35%), Gaps = 25/149 (16%)
Query: 113 HGPWP-TPGSRPGPTCVCLLTPASSSLRP-----------CLSDRGTCPGAPQGAVGTCR 160
H P P +P P P+ V L+P +L P G AP+ A
Sbjct: 854 HSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSM 913
Query: 161 ASPQSPCHRHPSLRSGLEWTQPPDQDQGLLTP--GSPPLVSGVTQTP---W--TSPFCPP 213
S R G+ + P +G TP +PP G TP W T P P
Sbjct: 914 TSSSPKKARATPAPKGIPASPSP---KGAPTPPAATPPSPKGGPATPSPKWAPTPPAATP 970
Query: 214 RPTPWVGAAFTAAN--PCPPAPTASSVTG 240
P+P G A + P PPA T S G
Sbjct: 971 -PSPKGGPATPSPKGAPTPPAATPPSPKG 998
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 40.4 bits (93), Expect = 0.001
Identities = 57/208 (27%), Positives = 76/208 (36%), Gaps = 16/208 (7%)
Query: 35 PSAGPTTQSQPHALRPGLRGRGGWWPQPFWIHSPPLTHSVGTFICLDGLVCALKAPGLGV 94
P A P ++P A + G P P + PP VG K P V
Sbjct: 361 PPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP---GVGKTPAQQP--GPAKPPTQQV 415
Query: 95 GLTPAPW-RPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQ 153
G TP P + PG + GP TP +PGP + PA + S + T P P
Sbjct: 416 G-TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKI----PAQQAGPGKTSAQQTGPTKPP 470
Query: 154 GAV-GTCRASPQSPCHRHPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCP 212
+ G + PQ P P + +PP Q G P PP G + P
Sbjct: 471 SQLPGPAKPPPQQPGPAKPPPQQPGS-AKPPSQQPGSTKP--PPQQPGPAKPSPQQPGST 527
Query: 213 PRPTPWVGAAF-TAANPCPPAPTASSVT 239
P+ G+A +A P P P+A T
Sbjct: 528 KPPSQQPGSAKPSAQQPSPAKPSAQQST 555
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 40.4 bits (93), Expect = 0.001
Identities = 57/208 (27%), Positives = 76/208 (36%), Gaps = 16/208 (7%)
Query: 35 PSAGPTTQSQPHALRPGLRGRGGWWPQPFWIHSPPLTHSVGTFICLDGLVCALKAPGLGV 94
P A P ++P A + G P P + PP VG K P V
Sbjct: 361 PPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP---GVGKTPAQQP--GPAKPPTQQV 415
Query: 95 GLTPAPW-RPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQ 153
G TP P + PG + GP TP +PGP + PA + S + T P P
Sbjct: 416 G-TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKI----PAQQAGPGKTSAQQTGPTKPP 470
Query: 154 GAV-GTCRASPQSPCHRHPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCP 212
+ G + PQ P P + +PP Q G P PP G + P
Sbjct: 471 SQLPGPAKPPPQQPGPAKPPPQQPGS-AKPPSQQPGSTKP--PPQQPGPAKPSPQQPGST 527
Query: 213 PRPTPWVGAAF-TAANPCPPAPTASSVT 239
P+ G+A +A P P P+A T
Sbjct: 528 KPPSQQPGSAKPSAQQPSPAKPSAQQST 555
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 38.9 bits (89), Expect = 0.004
Identities = 52/180 (28%), Positives = 66/180 (36%), Gaps = 43/180 (23%)
Query: 88 KAPGLGVGLT-PAPW---RPPGQ------SRMLEGHGPWPTPGSRPGPTCVC-LLTPASS 136
+A G VGL PAP RPP + S E P+P +R P+ L PAS
Sbjct: 181 RAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASR 240
Query: 137 SLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQPPD------------ 184
SL S T +P + + R +P++P H GL+ +PP
Sbjct: 241 SL----SSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 296
Query: 185 ---QDQGLLTPGS--------PPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAP 233
L TP PP + T P T P PP TP A P P AP
Sbjct: 297 GPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATP-----LPLAPPSPSAP 351
Score = 31.6 bits (70), Expect = 0.64
Identities = 61/236 (25%), Positives = 74/236 (31%), Gaps = 64/236 (27%)
Query: 11 PPHPEIQLRLLCPGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPFWIHSPPL 70
PP P +Q P SPSA P +Q+ P P L+ P P SPP+
Sbjct: 668 PPSPPVQAPFSPPASP-----PVSPSATPPSQAPPSLAAPPLQVP----PSP--PASPPM 716
Query: 71 THSVGTFICLDGLVCALKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCL 130
+ S TP P PP P P + P+
Sbjct: 717 SPSA----------------------TPPPQAPP----------PLAAPPLQVPPS---- 740
Query: 131 LTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQPPDQDQGLL 190
PAS + P + P P A + P P SL PP L
Sbjct: 741 -PPASPPMSPSATPPPRVP--PLLAAPPLQVPPSPPA----SLPMSPLAKPPPQAPPALA 793
Query: 191 TPGSPPLVSGVTQTPWTSPFCP-------PRPTPWVGAAFTAANP---CPPAPTAS 236
TP L S P +PF P P TP A A P PP+P AS
Sbjct: 794 TPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPAS 849
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 38.9 bits (89), Expect = 0.004
Identities = 34/135 (25%), Positives = 49/135 (36%), Gaps = 13/135 (9%)
Query: 115 PWPTPGSRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASP-----QSPCHR 169
P PTP PT + T ++ + P + T P T +P Q+P
Sbjct: 1439 PTPTPTGTQAPTPTAITTTSTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPT-- 1496
Query: 170 HPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPC 229
P+ + P G TP S P+ + T TP +P PTP + T P
Sbjct: 1497 -PTAITTTTTVTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTPTPTPISTTTTVTPT 1555
Query: 230 P-----PAPTASSVT 239
P PT + +T
Sbjct: 1556 PTPTGTQTPTTTPIT 1570
Score = 36.2 bits (82), Expect = 0.026
Identities = 32/130 (24%), Positives = 45/130 (34%), Gaps = 8/130 (6%)
Query: 115 PWPTPGSRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASP-----QSPCHR 169
P PTP PT + T + + P + T P T +P Q+P
Sbjct: 1485 PTPTPTGTQTPTPTAITTTTTVTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTPT-- 1542
Query: 170 HPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPC 229
P+ S P G TP + P+ + T TP +P PT + T P
Sbjct: 1543 -PTPISTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTVLITTTTTMTPT 1601
Query: 230 PPAPTASSVT 239
P + S T
Sbjct: 1602 PTPTSTKSTT 1611
Score = 35.4 bits (80), Expect = 0.045
Identities = 31/122 (25%), Positives = 43/122 (35%), Gaps = 5/122 (4%)
Query: 115 PWPTPGSRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLR 174
P PTP PT + T + + P + T P T +P + P+
Sbjct: 1347 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTST 1406
Query: 175 SGLEWTQ--PPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPA 232
T P G TP + P+ + T TP +P PTP A T + P
Sbjct: 1407 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQAPTP---TAITTTSTVTPT 1463
Query: 233 PT 234
PT
Sbjct: 1464 PT 1465
Score = 33.5 bits (75), Expect = 0.17
Identities = 55/192 (28%), Positives = 63/192 (32%), Gaps = 48/192 (25%)
Query: 34 SPSAGPTTQSQPHALRPGLRGRGGWWPQPFWIHSPPLTHSVGTFICLDGLVCALKAPGLG 93
S PTT S H L P P SPP T + GT
Sbjct: 1714 STPTAPTTTSGGHTLSP----------PPSTTTSPPGTPTRGTT---------------- 1747
Query: 94 VGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPC--LSDRGTCPGA 151
G + AP Q+ P PTP S P L P SS+ C L+D PG
Sbjct: 1748 TGSSSAPTPSTVQTTTTSAWTPTPTPLSTPSIIRTTGLRPYPSSVLICCVLNDTYYAPGE 1807
Query: 152 P--QGAVG-TCRASPQSPCHRHPSLRSGLE---WTQPPDQDQGLLTPGSPPLVSGVTQTP 205
G G TC + SL LE W+ P TP P S T TP
Sbjct: 1808 EVYNGTYGDTCYFV-------NCSLSCTLEFYNWSCPS-------TPSPTPTPSKSTPTP 1853
Query: 206 WTSPFCPPRPTP 217
P +PTP
Sbjct: 1854 SKPSSTPSKPTP 1865
Score = 30.4 bits (67), Expect = 1.4
Identities = 34/135 (25%), Positives = 46/135 (34%), Gaps = 11/135 (8%)
Query: 115 PWPTPGSRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASP-----QSPCHR 169
P PTP PT + T + + P + T P T +P Q+P
Sbjct: 1370 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTPTTT 1429
Query: 170 HPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPC 229
+ + + T P Q TP + S VT TP + P TP P
Sbjct: 1430 PITTTTTVTPTPTPTGTQAP-TPTAITTTSTVTPTPTPTGTQTPTTTPITTTTTVTPTPT 1488
Query: 230 P-----PAPTASSVT 239
P P PTA + T
Sbjct: 1489 PTGTQTPTPTAITTT 1503
Score = 28.1 bits (61), Expect = 7.1
Identities = 31/121 (25%), Positives = 41/121 (33%), Gaps = 18/121 (14%)
Query: 115 PWPTPGSRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLR 174
P PTP PT V + T + + P + + P T A+P + P
Sbjct: 1577 PTPTPTGTQTPTTVLITTTTTMTPTPTPTSTKSTTVTPITTTTTVTATPTPTGTQTP--- 1633
Query: 175 SGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVG-AAFTAANPCPPAP 233
T P +TP T TP T PP T A T +NP P +
Sbjct: 1634 -----TMIPISTTTTVTP---------TPTPTTGSTGPPTHTSTAPIAELTTSNPPPESS 1679
Query: 234 T 234
T
Sbjct: 1680 T 1680
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 38.5 bits (88), Expect = 0.005
Identities = 44/161 (27%), Positives = 56/161 (34%), Gaps = 29/161 (18%)
Query: 97 TPAPWRPPGQSRM----LEGHGPWPTPGSRPGPTCVCLLTPASS-----------SLRPC 141
TP P P Q+ L G P+ + P P + L+ S+ L P
Sbjct: 380 TPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQ 439
Query: 142 LSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQP-PDQDQGLLTPGSPPLVSG 200
+ P P G + P P HP +GL P P Q PG PP
Sbjct: 440 SQPLPSSPAQPPGLTQSQNLPP--PPASHPP--TGLHQVAPQPPFAQHPFVPGGPP---- 491
Query: 201 VTQTPWTSPFCPPRPTPWVGAAFTAANPCP-PAPTASSVTG 240
P T P CP TP G +A PC A + S+ G
Sbjct: 492 ----PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAG 528
Score = 33.9 bits (76), Expect = 0.13
Identities = 50/170 (29%), Positives = 62/170 (36%), Gaps = 36/170 (21%)
Query: 86 ALKAPGLGVGLTPAP-WRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPCLSD 144
AL+AP G+TPAP PPG ++ PTPG P T V ++S P
Sbjct: 186 ALQAP---TGVTPAPSSAPPGTPQL-------PTPGPTPSATAVPPQGSPTASQAPNQPQ 235
Query: 145 RGTCPGAPQGAVGTCRA-------SPQSPCH--RHPSLR---------SGLEWTQPPDQD 186
T P P + A SP P H HP L+ S QPP
Sbjct: 236 APTAP-VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG 294
Query: 187 QGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTAS 236
QG PG L +G P PP+P A P +P A+
Sbjct: 295 QG--PPGPHSLQAG----PLLQHPGPPQPFGLPPQASQGQAPLGTSPAAA 338
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 38.5 bits (88), Expect = 0.005
Identities = 44/161 (27%), Positives = 56/161 (34%), Gaps = 29/161 (18%)
Query: 97 TPAPWRPPGQSRM----LEGHGPWPTPGSRPGPTCVCLLTPASS-----------SLRPC 141
TP P P Q+ L G P+ + P P + L+ S+ L P
Sbjct: 934 TPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQ 993
Query: 142 LSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQP-PDQDQGLLTPGSPPLVSG 200
+ P P G + P P HP +GL P P Q PG PP
Sbjct: 994 SQPLPSSPAQPPGLTQSQNLPP--PPASHPP--TGLHQVAPQPPFAQHPFVPGGPP---- 1045
Query: 201 VTQTPWTSPFCPPRPTPWVGAAFTAANPCP-PAPTASSVTG 240
P T P CP TP G +A PC A + S+ G
Sbjct: 1046 ----PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAG 1082
Score = 33.9 bits (76), Expect = 0.13
Identities = 50/170 (29%), Positives = 62/170 (36%), Gaps = 36/170 (21%)
Query: 86 ALKAPGLGVGLTPAP-WRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPCLSD 144
AL+AP G+TPAP PPG ++ PTPG P T V ++S P
Sbjct: 740 ALQAP---TGVTPAPSSAPPGTPQL-------PTPGPTPSATAVPPQGSPTASQAPNQPQ 789
Query: 145 RGTCPGAPQGAVGTCRA-------SPQSPCH--RHPSLR---------SGLEWTQPPDQD 186
T P P + A SP P H HP L+ S QPP
Sbjct: 790 APTAP-VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG 848
Query: 187 QGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTAS 236
QG PG L +G P PP+P A P +P A+
Sbjct: 849 QG--PPGPHSLQAG----PLLQHPGPPQPFGLPPQASQGQAPLGTSPAAA 892
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 38.5 bits (88), Expect = 0.005
Identities = 44/161 (27%), Positives = 56/161 (34%), Gaps = 29/161 (18%)
Query: 97 TPAPWRPPGQSRM----LEGHGPWPTPGSRPGPTCVCLLTPASS-----------SLRPC 141
TP P P Q+ L G P+ + P P + L+ S+ L P
Sbjct: 934 TPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQ 993
Query: 142 LSDRGTCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQP-PDQDQGLLTPGSPPLVSG 200
+ P P G + P P HP +GL P P Q PG PP
Sbjct: 994 SQPLPSSPAQPPGLTQSQNLPP--PPASHPP--TGLHQVAPQPPFAQHPFVPGGPP---- 1045
Query: 201 VTQTPWTSPFCPPRPTPWVGAAFTAANPCP-PAPTASSVTG 240
P T P CP TP G +A PC A + S+ G
Sbjct: 1046 ----PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAG 1082
Score = 33.9 bits (76), Expect = 0.13
Identities = 50/170 (29%), Positives = 62/170 (36%), Gaps = 36/170 (21%)
Query: 86 ALKAPGLGVGLTPAP-WRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPCLSD 144
AL+AP G+TPAP PPG ++ PTPG P T V ++S P
Sbjct: 740 ALQAP---TGVTPAPSSAPPGTPQL-------PTPGPTPSATAVPPQGSPTASQAPNQPQ 789
Query: 145 RGTCPGAPQGAVGTCRA-------SPQSPCH--RHPSLR---------SGLEWTQPPDQD 186
T P P + A SP P H HP L+ S QPP
Sbjct: 790 APTAP-VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG 848
Query: 187 QGLLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTAS 236
QG PG L +G P PP+P A P +P A+
Sbjct: 849 QG--PPGPHSLQAG----PLLQHPGPPQPFGLPPQASQGQAPLGTSPAAA 892
>gi|38201702 telomerase reverse transcriptase isoform 2 [Homo
sapiens]
Length = 1120
Score = 38.1 bits (87), Expect = 0.007
Identities = 51/187 (27%), Positives = 59/187 (31%), Gaps = 53/187 (28%)
Query: 38 GPTTQSQPHALRPGLRGRGGWWPQPFWIHSPPLTHSVGTFICLDGLVCALKAPGL----- 92
G TQ++P G R R G + W HS + G+ L APG
Sbjct: 179 GAATQARPPPHASGPRRRLGC--ERAWNHS----------VREAGVPLGLPAPGARRRGG 226
Query: 93 -GVGLTPAPWRP-----PGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPCLSDRG 146
P P RP P R G G W PG GP SDRG
Sbjct: 227 SASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTRGP-----------------SDRG 269
Query: 147 TCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPW 206
C SP P SL L T+ G PP S + PW
Sbjct: 270 FCV-----------VSPARPAEEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPR-PW 317
Query: 207 TSPFCPP 213
+P CPP
Sbjct: 318 DTP-CPP 323
>gi|109633031 telomerase reverse transcriptase isoform 1 [Homo
sapiens]
Length = 1132
Score = 38.1 bits (87), Expect = 0.007
Identities = 51/187 (27%), Positives = 59/187 (31%), Gaps = 53/187 (28%)
Query: 38 GPTTQSQPHALRPGLRGRGGWWPQPFWIHSPPLTHSVGTFICLDGLVCALKAPGL----- 92
G TQ++P G R R G + W HS + G+ L APG
Sbjct: 179 GAATQARPPPHASGPRRRLGC--ERAWNHS----------VREAGVPLGLPAPGARRRGG 226
Query: 93 -GVGLTPAPWRP-----PGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPCLSDRG 146
P P RP P R G G W PG GP SDRG
Sbjct: 227 SASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTRGP-----------------SDRG 269
Query: 147 TCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPW 206
C SP P SL L T+ G PP S + PW
Sbjct: 270 FCV-----------VSPARPAEEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPR-PW 317
Query: 207 TSPFCPP 213
+P CPP
Sbjct: 318 DTP-CPP 323
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 37.7 bits (86), Expect = 0.009
Identities = 66/232 (28%), Positives = 78/232 (33%), Gaps = 28/232 (12%)
Query: 23 PGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPFWI---HSPPLTHSVGTFIC 79
PG L GGS P + S P + RP L P P PP VG
Sbjct: 223 PGNRGTALGGGSIRQSPLSSSSPFSNRPPLP------PTPSRALDDKPPPPPPPVGNRPS 276
Query: 80 LDGLVCALKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASS--S 137
+ P P+ RP S+ P P P SRPGP L P+SS
Sbjct: 277 IHREAVPPPPPQNNKPPVPSTPRPSASSQA----PPPPPPPSRPGPP---PLPPSSSGND 329
Query: 138 LRPCLSDR------GTCPGAPQGAVGTCRASPQS---PCHRHPSLRSGLEWTQPPDQDQG 188
P L R T P G G P P R P RSG PP G
Sbjct: 330 ETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNG 389
Query: 189 LLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVTG 240
+ P +++ SP PRP P +A P PP P+ S G
Sbjct: 390 STSRALPATPQLPSRSGVDSPRSGPRP-PLPPDRPSAGAPPPPPPSTSIRNG 440
Score = 32.3 bits (72), Expect = 0.38
Identities = 47/159 (29%), Positives = 61/159 (38%), Gaps = 22/159 (13%)
Query: 87 LKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPCLSDRG 146
L PG G + P+ PP G P P+PG R GP P + + P D G
Sbjct: 128 LLPPG-GRSTSAKPFSPPSGP----GRFPVPSPGHRSGPP-----EPQRNRMPPPRPDVG 177
Query: 147 TCPGA-PQGAVGTCRASPQSPCHR-HPSLRSGLEWTQPPDQDQGLLTPGSPPLVSG---V 201
+ P + P T R SP +R P + G QP PG+ G +
Sbjct: 178 SKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPR--QPSPGPTPPPFPGNRGTALGGGSI 235
Query: 202 TQTPW--TSPFC--PPRPTPWVGAAFTAANPCPPAPTAS 236
Q+P +SPF PP P P A P PP P +
Sbjct: 236 RQSPLSSSSPFSNRPPLP-PTPSRALDDKPPPPPPPVGN 273
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 37.7 bits (86), Expect = 0.009
Identities = 66/232 (28%), Positives = 78/232 (33%), Gaps = 28/232 (12%)
Query: 23 PGETYGKLMGGSPSAGPTTQSQPHALRPGLRGRGGWWPQPFWI---HSPPLTHSVGTFIC 79
PG L GGS P + S P + RP L P P PP VG
Sbjct: 223 PGNRGTALGGGSIRQSPLSSSSPFSNRPPLP------PTPSRALDDKPPPPPPPVGNRPS 276
Query: 80 LDGLVCALKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASS--S 137
+ P P+ RP S+ P P P SRPGP L P+SS
Sbjct: 277 IHREAVPPPPPQNNKPPVPSTPRPSASSQA----PPPPPPPSRPGPP---PLPPSSSGND 329
Query: 138 LRPCLSDR------GTCPGAPQGAVGTCRASPQS---PCHRHPSLRSGLEWTQPPDQDQG 188
P L R T P G G P P R P RSG PP G
Sbjct: 330 ETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNG 389
Query: 189 LLTPGSPPLVSGVTQTPWTSPFCPPRPTPWVGAAFTAANPCPPAPTASSVTG 240
+ P +++ SP PRP P +A P PP P+ S G
Sbjct: 390 STSRALPATPQLPSRSGVDSPRSGPRP-PLPPDRPSAGAPPPPPPSTSIRNG 440
Score = 32.3 bits (72), Expect = 0.38
Identities = 47/159 (29%), Positives = 61/159 (38%), Gaps = 22/159 (13%)
Query: 87 LKAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPCLSDRG 146
L PG G + P+ PP G P P+PG R GP P + + P D G
Sbjct: 128 LLPPG-GRSTSAKPFSPPSGP----GRFPVPSPGHRSGPP-----EPQRNRMPPPRPDVG 177
Query: 147 TCPGA-PQGAVGTCRASPQSPCHR-HPSLRSGLEWTQPPDQDQGLLTPGSPPLVSG---V 201
+ P + P T R SP +R P + G QP PG+ G +
Sbjct: 178 SKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPR--QPSPGPTPPPFPGNRGTALGGGSI 235
Query: 202 TQTPW--TSPFC--PPRPTPWVGAAFTAANPCPPAPTAS 236
Q+P +SPF PP P P A P PP P +
Sbjct: 236 RQSPLSSSSPFSNRPPLP-PTPSRALDDKPPPPPPPVGN 273
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 37.7 bits (86), Expect = 0.009
Identities = 50/162 (30%), Positives = 56/162 (34%), Gaps = 31/162 (19%)
Query: 90 PGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLR---PCLSDRG 146
P LG P P RPPG G P P PG+ P L P LR P L G
Sbjct: 411 PPLGPPPAP-PLRPPGPPT---GLPPGPPPGAPP-----FLRPPGMPGLRGPLPRLLPPG 461
Query: 147 TCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQTPW 206
PG P G P P P L G PP + PG PP G+ + P
Sbjct: 462 PPPGRPPGP-------PPGP---PPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPL 511
Query: 207 TSPFCP---------PRPTPWVGAAFTAANPCPPAPTASSVT 239
P P P P P V +A P A S+ T
Sbjct: 512 VPPLGPAPPGLFPPAPLPNPGVLSAPPNLIQRPKADDTSAAT 553
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 37.4 bits (85), Expect = 0.012
Identities = 44/151 (29%), Positives = 51/151 (33%), Gaps = 28/151 (18%)
Query: 96 LTPAPWRPPGQSRMLEGHGPWPTPGS--RPGPTCVCLLTPASSSLR------PCLSDRG- 146
L P W + M G + S P P CL TP SS R P S +G
Sbjct: 335 LDPCLWHQDTEDLMDSGGSTLSSAASGLAPYPPAACLSTPYSSIPRGREKAGPMGSHQGP 394
Query: 147 ---TCPGAPQGAVGTCRASPQSPCHRHPSLRSGLEWTQPPDQDQGLLTPGSPPLVSGVTQ 203
C AP G V +C+A + W PP GL P P S
Sbjct: 395 GPPPCQKAPSGLVTSCKAPFLVDQSQKLPAVPASSWKPPP----GLAPPQKAPAAS---- 446
Query: 204 TPWTSPFCPPRPTPWVGAAFTAANPCPPAPT 234
PPR P V A A P PAP+
Sbjct: 447 -------APPRKAPAVPAPSQKA-PAVPAPS 469
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.138 0.490
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,549,640
Number of Sequences: 37866
Number of extensions: 1127945
Number of successful extensions: 5509
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 450
Number of HSP's that attempted gapping in prelim test: 4583
Number of HSP's gapped (non-prelim): 1229
length of query: 241
length of database: 18,247,518
effective HSP length: 99
effective length of query: 142
effective length of database: 14,498,784
effective search space: 2058827328
effective search space used: 2058827328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.