Guide to the Human Genome
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Search of human proteins with 169209545

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169209545 PREDICTED: hypothetical protein [Homo sapiens]
         (237 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169209545 PREDICTED: hypothetical protein [Homo sapiens]           509   e-145
gi|169210556 PREDICTED: hypothetical protein [Homo sapiens]           509   e-145
gi|169210041 PREDICTED: hypothetical protein [Homo sapiens]           504   e-143
gi|239751037 PREDICTED: hypothetical protein [Homo sapiens]           455   e-128
gi|4505777 PHD finger protein 1 isoform a [Homo sapiens]               43   2e-04
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]                    42   4e-04
gi|24497554 homeobox A13 [Homo sapiens]                                40   0.002
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    40   0.002
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    40   0.002
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    40   0.002
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    39   0.005
gi|55956910 meningioma  1 [Homo sapiens]                               38   0.007
gi|40288197 GATA binding protein 6 [Homo sapiens]                      37   0.015
gi|134244285 Notch homolog 3 [Homo sapiens]                            37   0.019
gi|171906567 peripheral benzodiazepine receptor-associated prote...    36   0.025
gi|171906559 peripheral benzodiazepine receptor-associated prote...    36   0.025
gi|58331242 formin homology 2 domain containing 3 [Homo sapiens]       36   0.033
gi|58218984 single stranded DNA binding protein 4 isoform b [Hom...    36   0.033
gi|14249150 single stranded DNA binding protein 4 isoform a [Hom...    36   0.033
gi|4507831 Unc-51-like kinase 1 [Homo sapiens]                         35   0.043
gi|157384971 cyclin G associated kinase [Homo sapiens]                 35   0.043
gi|11037055 sperm associated antigen 4 [Homo sapiens]                  35   0.043
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap...    35   0.057
gi|46409372 G protein-coupled receptor 153 [Homo sapiens]              35   0.057
gi|169166217 PREDICTED: hypothetical protein [Homo sapiens]            35   0.074
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]           35   0.074
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]          35   0.074
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]          35   0.074
gi|116256363 transmembrane protease, serine 13 [Homo sapiens]          35   0.074
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]          35   0.074

>gi|169209545 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score =  509 bits (1311), Expect = e-145
 Identities = 237/237 (100%), Positives = 237/237 (100%)

Query: 1   MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
           MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN
Sbjct: 1   MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60

Query: 61  LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
           LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS
Sbjct: 61  LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120

Query: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVLGLTQPRLSSSLR 180
           PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVLGLTQPRLSSSLR
Sbjct: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVLGLTQPRLSSSLR 180

Query: 181 ISWHLLACVATQVGCACRLTEKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
           ISWHLLACVATQVGCACRLTEKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS
Sbjct: 181 ISWHLLACVATQVGCACRLTEKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237


>gi|169210556 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score =  509 bits (1311), Expect = e-145
 Identities = 237/237 (100%), Positives = 237/237 (100%)

Query: 1   MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
           MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN
Sbjct: 1   MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60

Query: 61  LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
           LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS
Sbjct: 61  LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120

Query: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVLGLTQPRLSSSLR 180
           PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVLGLTQPRLSSSLR
Sbjct: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVLGLTQPRLSSSLR 180

Query: 181 ISWHLLACVATQVGCACRLTEKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
           ISWHLLACVATQVGCACRLTEKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS
Sbjct: 181 ISWHLLACVATQVGCACRLTEKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237


>gi|169210041 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score =  504 bits (1298), Expect = e-143
 Identities = 235/237 (99%), Positives = 235/237 (99%)

Query: 1   MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
           MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN
Sbjct: 1   MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60

Query: 61  LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
           LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS
Sbjct: 61  LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120

Query: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVLGLTQPRLSSSLR 180
           PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVS LGLTQPRLSSSLR
Sbjct: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGLGLTQPRLSSSLR 180

Query: 181 ISWHLLACVATQVGCACRLTEKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
           ISWHLLACVATQVGCACRL EKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS
Sbjct: 181 ISWHLLACVATQVGCACRLREKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237


>gi|239751037 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score =  455 bits (1170), Expect = e-128
 Identities = 219/237 (92%), Positives = 219/237 (92%), Gaps = 6/237 (2%)

Query: 1   MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
           MPVHP WLGSACLPH       QSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN
Sbjct: 1   MPVHPDWLGSACLPHX------QSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 54

Query: 61  LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
           LSPSCPAEAGHGCASTGRQVGVSGAGSSP GPAPCVKCSAWVGTCFPLSLLQAAGGP GS
Sbjct: 55  LSPSCPAEAGHGCASTGRQVGVSGAGSSPPGPAPCVKCSAWVGTCFPLSLLQAAGGPTGS 114

Query: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVLGLTQPRLSSSLR 180
           PNGFCPEPWAPDHA TLHGLNKSL QGPRSGGAQRKPRAHTGEGVS L LTQPRLSSSLR
Sbjct: 115 PNGFCPEPWAPDHASTLHGLNKSLRQGPRSGGAQRKPRAHTGEGVSGLSLTQPRLSSSLR 174

Query: 181 ISWHLLACVATQVGCACRLTEKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
           ISWHLLACVATQVGCA RL EKTLGEDYVSAFLPSTGPSWAH  QTMCKSTRESGRS
Sbjct: 175 ISWHLLACVATQVGCARRLREKTLGEDYVSAFLPSTGPSWAHXGQTMCKSTRESGRS 231


>gi|4505777 PHD finger protein 1 isoform a [Homo sapiens]
          Length = 457

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 37/107 (34%), Positives = 44/107 (41%), Gaps = 15/107 (14%)

Query: 33  VKSPPGDVHAARACAPGR---HSGEGPPQGNLSPSCPAEAGHG-------CASTGRQVGV 82
           V+ P GD    RA   GR     GE P  G  +P   AE   G        A + R  G 
Sbjct: 339 VEPPTGDGALTRAGPWGRGLTSPGEAPEAGARAPEEEAEGESGGAGATLSSAQSARAPGA 398

Query: 83  SGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGSPNGFCPEPW 129
            GAGSS  G A     +A  G   P +LL A  GP G+ +     PW
Sbjct: 399 EGAGSSAEGTA-----AAPSGCLLPSTLLPAPQGPLGTVDPQTGHPW 440


>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
          Length = 1489

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 46/168 (27%), Positives = 55/168 (32%), Gaps = 30/168 (17%)

Query: 3   VHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSP------------PGDVHAARACAPGR 50
           V   W  S   P     PA  S+ G  L+S   P            P +V   R  AP  
Sbjct: 609 VSETW-ASPLFPAPRPFPAQSSASGSFLLSGWDPEGRGAGETLAGDPAEVLGERGTAPWV 667

Query: 51  HSGEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCS-AWVGTCFPLS 109
              E   +G+              S G      G G S  GP PC  CS     +C PL 
Sbjct: 668 EEEEEEEEGS--------------SPGEDSSSLGGGPSRRGPLPCPLCSREGACSCLPLE 713

Query: 110 LLQAAGGPAGSPNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKP 157
              A  G  G P   CP P  P+   +L     SL   P +  A   P
Sbjct: 714 RGDAVAGWGGHPALGCPHP--PEDDSSLRAERGSLADLPMAPPASAPP 759



 Score = 30.0 bits (66), Expect = 1.8
 Identities = 29/102 (28%), Positives = 36/102 (35%), Gaps = 2/102 (1%)

Query: 35  SPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEA-GHGCASTGRQVGVSGAGSSPSGPA 93
           +PP  +      A  ++ G GPP     P  P  A     AS      V+  GS  S P 
Sbjct: 757 APPEFLDPLMGAAAPQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPG 816

Query: 94  PCVKCSAWVGTCFPLSLLQAAGGPAGSPNGFCPEPWAPDHAP 135
           P    S +  T  P S   A  G   +     P P AP   P
Sbjct: 817 PKPGDSGY-ETETPFSPEGAFPGGGAAEEEGVPRPRAPPEPP 857


>gi|24497554 homeobox A13 [Homo sapiens]
          Length = 388

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 43/165 (26%), Positives = 54/165 (32%), Gaps = 30/165 (18%)

Query: 6   AWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARAC----------APGRHSGEG 55
           A  G    PH    PA  ++ G   V+  +      AA  C          APG  S   
Sbjct: 51  AGAGGGGFPH----PAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYS 106

Query: 56  PPQGNLSPSCPAEAGHGCASTGRQVGVSGAGS-SPSGPA------PCVKCSAWVGTCFPL 108
              G   PS  A A    A+       S +G   P+GPA       C  CSA        
Sbjct: 107 SAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSA-------- 158

Query: 109 SLLQAAGGPAGSPNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGA 153
              Q++ GPA  P G+    + P      H      C  P S  A
Sbjct: 159 -AAQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAA 202


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 52/187 (27%), Positives = 67/187 (35%), Gaps = 44/187 (23%)

Query: 14  PHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSC----PAEA 69
           P     P P +SV G  +++   PG                 PP  + SPS     P  A
Sbjct: 586 PRRPPTPGPDTSVSGPRLTLALAPGP----------------PPPPSRSPSSTLSGPDLA 629

Query: 70  GHGCASTGRQVGVSGAGSSPSG-----PAPCVKC-----SAWV-GTCFPLSLLQAAGGP- 117
           GH  ++T     + G  S P G     P P  +      +AW  G   PL+   A G P 
Sbjct: 630 GHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPL 689

Query: 118 -------AGSPNGFCP--EPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVL 168
                   GS +G C   E   P+ A    G   +L  GP  G +  K  A  G G S  
Sbjct: 690 PWPPATGPGSADGLCTIYETEGPESATPAPG---ALDPGPSPGTSGGKAAAGAGAGASSR 746

Query: 169 GLTQPRL 175
              Q RL
Sbjct: 747 SPKQARL 753


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
          Length = 1124

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 52/187 (27%), Positives = 67/187 (35%), Gaps = 44/187 (23%)

Query: 14   PHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSC----PAEA 69
            P     P P +SV G  +++   PG                 PP  + SPS     P  A
Sbjct: 855  PRRPPTPGPDTSVSGPRLTLALAPGP----------------PPPPSRSPSSTLSGPDLA 898

Query: 70   GHGCASTGRQVGVSGAGSSPSG-----PAPCVKC-----SAWV-GTCFPLSLLQAAGGP- 117
            GH  ++T     + G  S P G     P P  +      +AW  G   PL+   A G P 
Sbjct: 899  GHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPL 958

Query: 118  -------AGSPNGFCP--EPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVL 168
                    GS +G C   E   P+ A    G   +L  GP  G +  K  A  G G S  
Sbjct: 959  PWPPATGPGSADGLCTIYETEGPESATPAPG---ALDPGPSPGTSGGKAAAGAGAGASSR 1015

Query: 169  GLTQPRL 175
               Q RL
Sbjct: 1016 SPKQARL 1022


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 52/187 (27%), Positives = 67/187 (35%), Gaps = 44/187 (23%)

Query: 14  PHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSC----PAEA 69
           P     P P +SV G  +++   PG                 PP  + SPS     P  A
Sbjct: 547 PRRPPTPGPDTSVSGPRLTLALAPGP----------------PPPPSRSPSSTLSGPDLA 590

Query: 70  GHGCASTGRQVGVSGAGSSPSG-----PAPCVKC-----SAWV-GTCFPLSLLQAAGGP- 117
           GH  ++T     + G  S P G     P P  +      +AW  G   PL+   A G P 
Sbjct: 591 GHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPL 650

Query: 118 -------AGSPNGFCP--EPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVL 168
                   GS +G C   E   P+ A    G   +L  GP  G +  K  A  G G S  
Sbjct: 651 PWPPATGPGSADGLCTIYETEGPESATPAPG---ALDPGPSPGTSGGKAAAGAGAGASSR 707

Query: 169 GLTQPRL 175
              Q RL
Sbjct: 708 SPKQARL 714


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 53/183 (28%), Positives = 70/183 (38%), Gaps = 29/183 (15%)

Query: 5   PAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPS 64
           P ++G+A  P A   P+P ++      +   PP     A    P  H   GPP    +  
Sbjct: 241 PPFVGAAA-PPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPA-GPPTAAPAVP 298

Query: 65  CPAEAGHG---------CASTGRQVGVS---GAGSSPSGPAPCVKCSA---WVGTCFPLS 109
            PA A +G           + G   GVS   G G++ + PAP VK  +    V    P +
Sbjct: 299 PPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAA 358

Query: 110 LLQAAGGPAGSP---------NGFCPEPWA-PDHAP-TLHGLNKSLCQGPRSGGAQRKPR 158
              AA GPA +           G  P P A P  AP T  GL K    G  +    R P 
Sbjct: 359 QTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKG-AAGAVTQSLSRTPT 417

Query: 159 AHT 161
           A T
Sbjct: 418 ATT 420



 Score = 35.0 bits (79), Expect = 0.057
 Identities = 40/142 (28%), Positives = 48/142 (33%), Gaps = 24/142 (16%)

Query: 39  DVHAARACAPGRHSGEGPPQG--NLSPSCPAEAGHGCASTGRQVGVSGAGSS-------- 88
           +V AA A A G H   G P G     P+ PAE   G A      G +  G          
Sbjct: 49  EVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPP 108

Query: 89  -------PSGPAPCV-----KCSAWVGTCFPLSLLQA-AGGPAGSPNGFCPEPWAPDHAP 135
                  P+GPAP             G+C P+    A A GP  +P G   +P  P    
Sbjct: 109 SPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAG-PAKPAGPAALA 167

Query: 136 TLHGLNKSLCQGPRSGGAQRKP 157
              G       GP  G    KP
Sbjct: 168 ARAGPGPGPGPGPGPGPGPGKP 189



 Score = 32.3 bits (72), Expect = 0.37
 Identities = 38/144 (26%), Positives = 49/144 (34%), Gaps = 16/144 (11%)

Query: 2   PVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRH-----SGEGP 56
           P   A  G A     + G AP+    G     ++ PG     R   P        +G  P
Sbjct: 67  PAGAAGAGPAAPAEGAPGAAPEPPPAG-----RARPGGGGPQRPGPPSPRRPLVPAGPAP 121

Query: 57  PQGNLSPSCPAEAGHGCASTGRQVGVS-GAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAG 115
           P   L P     AG  CA       V+ G   +P+GPA     +A      P        
Sbjct: 122 PAAKLRPPPEGSAG-SCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP----GPGP 176

Query: 116 GPAGSPNGFCPEPWAPDHAPTLHG 139
           GP   P     +P  P  A TL+G
Sbjct: 177 GPGPGPGPGPGKPAGPGAAQTLNG 200


>gi|55956910 meningioma  1 [Homo sapiens]
          Length = 1320

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 12/135 (8%)

Query: 36  PPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCASTG---RQVGVSGAGSSPSGP 92
           PPGD+   R    G  +  GP   +L+P  P   G G    G     + + G G  P+ P
Sbjct: 638 PPGDLLPRRMGGSGLPADCGPHDPSLAPP-PPPGGSGVLFRGPLQEPMRMPGEGHVPALP 696

Query: 93  APCVKCSAWVGTCFPLSLLQAAGGPAGSPNGFCP-EPWAPDHAPTLHGLNKSLCQGPRSG 151
           +P ++    +G    L  LQ+ G   G P+      P  PD A +  G       G   G
Sbjct: 697 SPGLQFGGSLG---GLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQ----PGFPFG 749

Query: 152 GAQRKPRAHTGEGVS 166
            A R+   H+G GV+
Sbjct: 750 AAGRQSTPHSGPGVN 764


>gi|40288197 GATA binding protein 6 [Homo sapiens]
          Length = 595

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 29/86 (33%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 4   HPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHS-GEGPPQGNLS 62
           HP W      P AS    P  S GG      + PG   +A A    R      PP  N +
Sbjct: 222 HPGW------PQASADSPPYGSGGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGA 275

Query: 63  PSCPAEAGHGCASTGRQVGVSGAGSS 88
              P   G+  A +G   GVSG GSS
Sbjct: 276 AREPG--GYAAAGSGGAGGVSGGGSS 299


>gi|134244285 Notch homolog 3 [Homo sapiens]
          Length = 2321

 Score = 36.6 bits (83), Expect = 0.019
 Identities = 44/139 (31%), Positives = 52/139 (37%), Gaps = 20/139 (14%)

Query: 48   PGRHSGEGP---PQGNLSPSCPAEAGHGCASTGRQVGVSGAG-SSPSG---------PAP 94
            PG H G GP   P G   P   A A  G   + R  G +G G   P G         P P
Sbjct: 2034 PGPH-GLGPLLCPPGAFLPGLKA-AQSGSKKSRRPPGKAGLGPQGPRGRGKKLTLACPGP 2091

Query: 95   CVKCSAWVGTCFPLSLLQAAGGPAGSPNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQ 154
                S  +     L   +  GGP  SP GF  E   P  A T   ++ +   GP   G  
Sbjct: 2092 LADSSVTLSPVDSLDSPRPFGGPPASPGGFPLE--GPYAAATATAVSLAQLGGPGRAGLG 2149

Query: 155  RKPRAHTGEGVSVLGLTQP 173
            R+P    G  V  LGL  P
Sbjct: 2150 RQP---PGGCVLSLGLLNP 2165


>gi|171906567 peripheral benzodiazepine receptor-associated protein 1
            isoform b [Homo sapiens]
          Length = 1797

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 46/166 (27%), Positives = 56/166 (33%), Gaps = 25/166 (15%)

Query: 4    HPAWLGSACLPHASHGPAPQSSV--GGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNL 61
            HP+    A L  AS GP   SS       +  + PPG    A   +P R   +G  +   
Sbjct: 1033 HPSPEARAPLASASPGPGDPSSPLQHPAPLGTQEPPG----APPASPSREMAKGSHEDPP 1088

Query: 62   SPSCPAEAGHGCASTG--RQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAG 119
            +P    EAG     T   R    S  G    GPA             P    Q A   AG
Sbjct: 1089 APCSQEEAGAAVLGTSEERTASTSTLGEKDPGPAA------------PSLAKQEAEWTAG 1136

Query: 120  SPNGFCPEPWAPDHAPTLHGLNKSLCQG--PRSGGAQRKPRAHTGE 163
                 CP   +   A      N  +CQG  P SG   R  +  T E
Sbjct: 1137 EA---CPASSSTQGARAQQAPNTEMCQGGDPGSGLRPRAEKEDTAE 1179


>gi|171906559 peripheral benzodiazepine receptor-associated protein 1
            isoform a [Homo sapiens]
          Length = 1857

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 46/166 (27%), Positives = 56/166 (33%), Gaps = 25/166 (15%)

Query: 4    HPAWLGSACLPHASHGPAPQSSV--GGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNL 61
            HP+    A L  AS GP   SS       +  + PPG    A   +P R   +G  +   
Sbjct: 1093 HPSPEARAPLASASPGPGDPSSPLQHPAPLGTQEPPG----APPASPSREMAKGSHEDPP 1148

Query: 62   SPSCPAEAGHGCASTG--RQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAG 119
            +P    EAG     T   R    S  G    GPA             P    Q A   AG
Sbjct: 1149 APCSQEEAGAAVLGTSEERTASTSTLGEKDPGPAA------------PSLAKQEAEWTAG 1196

Query: 120  SPNGFCPEPWAPDHAPTLHGLNKSLCQG--PRSGGAQRKPRAHTGE 163
                 CP   +   A      N  +CQG  P SG   R  +  T E
Sbjct: 1197 EA---CPASSSTQGARAQQAPNTEMCQGGDPGSGLRPRAEKEDTAE 1239


>gi|58331242 formin homology 2 domain containing 3 [Homo sapiens]
          Length = 1439

 Score = 35.8 bits (81), Expect = 0.033
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 11  ACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAG 70
           ACL   SH P+   S   L VS  S PG  H  +A A     G+  P+    P   A AG
Sbjct: 538 ACLAPLSHSPSSSDSQEALTVSASS-PGTPHHPQASA-----GDPEPESEAEPEAEAGAG 591

Query: 71  HGCASTGRQVGVSGAGS 87
                 G+ +  +  G+
Sbjct: 592 QVADEAGQDIASAHEGA 608


>gi|58218984 single stranded DNA binding protein 4 isoform b [Homo
           sapiens]
          Length = 363

 Score = 35.8 bits (81), Expect = 0.033
 Identities = 41/153 (26%), Positives = 52/153 (33%), Gaps = 11/153 (7%)

Query: 14  PHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGC 73
           P       PQS  GG+     S  G    A    PG       P GN  P       +  
Sbjct: 181 PRGMASVGPQSYGGGMRPPPNSLAGPGLPAMNMGPGVRGPWASPSGNSIP-------YSS 233

Query: 74  ASTGRQVGVSGAGSSPSG---PAPCVKCSAWVGTCFPLSLLQAAGGPAGSPNGFCPE-PW 129
           +S G   G  G G  P     P+P    ++       ++ +    G A  P G  PE P 
Sbjct: 234 SSPGSYTGPPGGGGPPGTPIMPSPGDSTNSSENMYTIMNPIGQGAGRANFPLGPGPEGPM 293

Query: 130 APDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTG 162
           A   A   H +N SL  G   G  +  P A  G
Sbjct: 294 AAMSAMEPHHVNGSLGSGDMDGLPKSSPGAVAG 326


>gi|14249150 single stranded DNA binding protein 4 isoform a [Homo
           sapiens]
          Length = 385

 Score = 35.8 bits (81), Expect = 0.033
 Identities = 41/153 (26%), Positives = 52/153 (33%), Gaps = 11/153 (7%)

Query: 14  PHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGC 73
           P       PQS  GG+     S  G    A    PG       P GN  P       +  
Sbjct: 203 PRGMASVGPQSYGGGMRPPPNSLAGPGLPAMNMGPGVRGPWASPSGNSIP-------YSS 255

Query: 74  ASTGRQVGVSGAGSSPSG---PAPCVKCSAWVGTCFPLSLLQAAGGPAGSPNGFCPE-PW 129
           +S G   G  G G  P     P+P    ++       ++ +    G A  P G  PE P 
Sbjct: 256 SSPGSYTGPPGGGGPPGTPIMPSPGDSTNSSENMYTIMNPIGQGAGRANFPLGPGPEGPM 315

Query: 130 APDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTG 162
           A   A   H +N SL  G   G  +  P A  G
Sbjct: 316 AAMSAMEPHHVNGSLGSGDMDGLPKSSPGAVAG 348


>gi|4507831 Unc-51-like kinase 1 [Homo sapiens]
          Length = 1050

 Score = 35.4 bits (80), Expect = 0.043
 Identities = 34/105 (32%), Positives = 42/105 (40%), Gaps = 15/105 (14%)

Query: 50  RHSGEGPPQG--NLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCV----KCSAWVG 103
           R SG   P G    SPS PA A HG     +   +S  G  P  P+P V    +   W G
Sbjct: 463 RRSGSTSPLGFARASPSPPAHAEHGGVLARK---MSLGGGRPYTPSPQVGTIPERPGWSG 519

Query: 104 TCFPLSLLQAAGGPAGSPNGFCPEPWAPDHAPTLHGLNKSLCQGP 148
           T  P    +  GG +  P        AP+H+P   GL   L   P
Sbjct: 520 TPSPQGA-EMRGGRSPRPGSS-----APEHSPRTSGLGCRLHSAP 558


>gi|157384971 cyclin G associated kinase [Homo sapiens]
          Length = 1311

 Score = 35.4 bits (80), Expect = 0.043
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 88   SPSG-PAPCVKCSAWVGTCFP---LSLLQAAGGPAGSPNGFCPEPWAPDHAPTLHGLNKS 143
            SP G PAPC   ++W  +  P     L   + G  GSP GF P  + P  A T  G +  
Sbjct: 1060 SPGGQPAPCGSQASWTKSQNPDPFADLGDLSSGLQGSPAGFPPGGFIPKTATTPKGSSSW 1119

Query: 144  LCQGPRSGGAQRKPRA 159
                P + GA   P+A
Sbjct: 1120 QTSRPPAQGASWPPQA 1135


>gi|11037055 sperm associated antigen 4 [Homo sapiens]
          Length = 437

 Score = 35.4 bits (80), Expect = 0.043
 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 8/71 (11%)

Query: 53  GEGPPQGNLS--PSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSL 110
           G G P+G  +  PSC    G    S G   G + AGSS   PAP  +   W   C   ++
Sbjct: 43  GPGEPEGRRARGPSC----GEPALSAGVPGGTTWAGSSQQKPAP--RSHNWQTACGAATV 96

Query: 111 LQAAGGPAGSP 121
              A  P GSP
Sbjct: 97  RGGASEPTGSP 107


>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sapiens]
          Length = 2365

 Score = 35.0 bits (79), Expect = 0.057
 Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 30/180 (16%)

Query: 7    WLGSACLPHASHGP-------APQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQG 59
            W      P  S GP       + QS V    ++++   GD    +  +P R +   PPQ 
Sbjct: 906  WASFPLRPTQSDGPRTSSPSRSKQSEVPWASIALRPTQGD--RPQTSSPSRPAQHDPPQS 963

Query: 60   NLSPS---CPAEA-------GHGCAS-TGRQVGVSGAGSSPSGPAPCVK-CSAWVGTCFP 107
            +  P+    P+ A       GH   S T   V  +  G+  + P P    C+  +G    
Sbjct: 964  SFGPTQYNLPSRATSSSHNPGHQSTSRTSSPVYPAAYGAPLTSPEPSQPPCAVCIGH--- 1020

Query: 108  LSLLQAAGGPA---GSPNGFCPEPWAPDHAPTLHG---LNKSLCQGPRSGGAQRKPRAHT 161
                +A+  P      P  F PEP AP+  P  H    +  ++C G R       P  HT
Sbjct: 1021 RDAPRASSPPRYLQHDPFPFFPEPRAPESEPPHHEPPYIPPAVCIGHRDAPRASSPPRHT 1080


>gi|46409372 G protein-coupled receptor 153 [Homo sapiens]
          Length = 609

 Score = 35.0 bits (79), Expect = 0.057
 Identities = 38/140 (27%), Positives = 49/140 (35%), Gaps = 36/140 (25%)

Query: 14  PHASHGPAPQSSVGGLLV-------------SVKSPPGDVHAARACAPGRHSGEG--PPQ 58
           P    GP P+S+   LL              +++ PPG   AA A   G   GE   PP 
Sbjct: 483 PRRRPGPGPRSASASLLPDAFALTAFECEPQALRRPPGPFPAAPAAPDGADPGEAPTPPS 542

Query: 59  GNLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPA 118
                  P  + H  A + R  G+S +   P G                   L+AAGG  
Sbjct: 543 SAQRSPGPRPSAHSHAGSLRP-GLSASWGEPGG-------------------LRAAGG-G 581

Query: 119 GSPNGFCPEPWAPDHAPTLH 138
           GS + F   P       TLH
Sbjct: 582 GSTSSFLSSPSESSGYATLH 601


>gi|169166217 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 174

 Score = 34.7 bits (78), Expect = 0.074
 Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 7/100 (7%)

Query: 49  GRHSGEGPP-QGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVK-CSAWVGTCF 106
           GR S + P  Q +L P  PA  G    STG QV  +G G++ + P P V+ CSA  G+  
Sbjct: 73  GRLSTKRPERQASLLPR-PAPRG----STGAQVWWAGPGAAAAPPPPGVRQCSALAGSSV 127

Query: 107 PLSLLQAAGGPAGSPNGFCPEPWAPDHAPTLHGLNKSLCQ 146
           P       GG +GS      +P           L  ++CQ
Sbjct: 128 PWFPGGGGGGGSGSARRALRKPSGGGWKEAARPLGCAVCQ 167


>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
          Length = 571

 Score = 34.7 bits (78), Expect = 0.074
 Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 12/93 (12%)

Query: 14  PHASHGPAPQSSVGGLLVSVKSPPGDVHA-ARACAPGRHSGEGPPQGNLSPSCPAEAGHG 72
           P AS  P PQ  + G       PPG +H  A A  PG  +G  P Q +  P C    G G
Sbjct: 61  PRAS--PPPQGPLPG-------PPGALHRWALAVPPGAVAGPRPQQAS-PPPCGGPGGPG 110

Query: 73  CASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTC 105
               G  +G + AG   +G    V  +  VG C
Sbjct: 111 -GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGC 142


>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
          Length = 566

 Score = 34.7 bits (78), Expect = 0.074
 Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 12/93 (12%)

Query: 14  PHASHGPAPQSSVGGLLVSVKSPPGDVHA-ARACAPGRHSGEGPPQGNLSPSCPAEAGHG 72
           P AS  P PQ  + G       PPG +H  A A  PG  +G  P Q +  P C    G G
Sbjct: 61  PRAS--PPPQGPLPG-------PPGALHRWALAVPPGAVAGPRPQQAS-PPPCGGPGGPG 110

Query: 73  CASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTC 105
               G  +G + AG   +G    V  +  VG C
Sbjct: 111 -GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGC 142


>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
          Length = 566

 Score = 34.7 bits (78), Expect = 0.074
 Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 12/93 (12%)

Query: 14  PHASHGPAPQSSVGGLLVSVKSPPGDVHA-ARACAPGRHSGEGPPQGNLSPSCPAEAGHG 72
           P AS  P PQ  + G       PPG +H  A A  PG  +G  P Q +  P C    G G
Sbjct: 61  PRAS--PPPQGPLPG-------PPGALHRWALAVPPGAVAGPRPQQAS-PPPCGGPGGPG 110

Query: 73  CASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTC 105
               G  +G + AG   +G    V  +  VG C
Sbjct: 111 -GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGC 142


>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
          Length = 567

 Score = 34.7 bits (78), Expect = 0.074
 Identities = 30/83 (36%), Positives = 38/83 (45%), Gaps = 13/83 (15%)

Query: 14 PHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSP--SCPAEAGH 71
          P A   PA  S  G       +PPG    A+A +P + S  G P G  SP  + PA    
Sbjct: 15 PSAGASPAQASPAG-------TPPGRASPAQA-SPAQASPAGTPPGRASPAQASPAGTPP 66

Query: 72 GCASTGRQVGVSGAGSSPSGPAP 94
          G AS GR    S A +SP+  +P
Sbjct: 67 GRASPGR---ASPAQASPAQASP 86



 Score = 28.5 bits (62), Expect = 5.3
 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 10/55 (18%)

Query: 71  HGCASTGR--QVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGSPNG 123
           HG AS  R    G S A +SP+G  P        G   P     A   PAG+P G
Sbjct: 6   HGNASPARTPSAGASPAQASPAGTPP--------GRASPAQASPAQASPAGTPPG 52


>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
          Length = 845

 Score = 34.7 bits (78), Expect = 0.074
 Identities = 41/166 (24%), Positives = 54/166 (32%), Gaps = 27/166 (16%)

Query: 14  PHASHGPAPQSSVGG----------LLVSVKSPPGDVHAA------RACAPGRHSGEGPP 57
           P  S GP+  SS GG          L     S PG    A      +   PG  + + P 
Sbjct: 485 PEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPK 544

Query: 58  QGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGP 117
            G   P  P   G G +++ +    SG  +    P         +GT          GG 
Sbjct: 545 PGTSQPMPP---GVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGT 601

Query: 118 AGSPNGFCPEPWAP------DHAPTLHGLNKSLCQGPRSGGAQRKP 157
           A +P     +P  P       H PT  G      Q P  G +Q  P
Sbjct: 602 AQTPEAGTSQPMPPGMGTSTSHQPTTPG--GGTAQTPEPGTSQPMP 645


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,132,515
Number of Sequences: 37866
Number of extensions: 824147
Number of successful extensions: 3604
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 279
Number of HSP's that attempted gapping in prelim test: 3336
Number of HSP's gapped (non-prelim): 530
length of query: 237
length of database: 18,247,518
effective HSP length: 99
effective length of query: 138
effective length of database: 14,498,784
effective search space: 2000832192
effective search space used: 2000832192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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