LOC646879 8506

Name: LOC646879	Sequence: fasta or formatted (172aa)		NCBI GI: 169206470
Description: PREDICTED: similar to hCG1780976		Referenced in: ADP-Ribosylation Factors
Other entries for this name: alt mRNA [172aa] PREDICTED: similar to hCG1780976 alt mRNA [172aa] PREDICTED: similar to hCG1780976
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 9 2 C cysteine 1.2 2 1 D aspartate 7.0 12 1 E glutamate 11.6 20 2 F phenylalanine 7.6 13 1 G glycine 4.7 8 1 H histidine 1.7 3 2 I isoleucine 6.4 11 2 K lysine 5.2 9 1 L leucine 11.6 20 2 M methionine 3.5 6 1 N asparagine 4.1 7 2 P proline 1.2 2 1 Q glutamine 7.0 12 2 R arginine 2.9 5 1 S serine 5.8 10 3 T threonine 5.8 10 2 V valine 2.9 5 2 W tryptophan 0.0 0 0 Y tyrosine 4.7 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1780976 LOC646879 1.000 PREDICTED: similar to hCG1780976 LOC646879 1.000 PREDICTED: similar to hCG1780976 ARL2BP 0.633 binder of Arl Two CCDC104 0.063 coiled-coil domain containing 104 DNMT1 0.013 DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho... DNMT1 0.013 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo... FLJ32682 0.013 hypothetical protein LOC220081 CASP8AP2 0.013 caspase 8 associated protein 2 CASP8AP2 0.013 caspase 8 associated protein 2 CASP8AP2 0.013 caspase 8 associated protein 2 INTU 0.013 PDZ domain containing 6 ACCN1 0.013 amiloride-sensitive cation channel 1, neuronal isofor... ACCN1 0.013 amiloride-sensitive cation channel 1, neuronal isofo... TRPM1 0.013 transient receptor potential cation channel, subfami... CCDC146 0.013 coiled-coil domain containing 146 SNX5 0.009 sorting nexin 5 SNX5 0.009 sorting nexin 5 HEATR1 0.009 protein BAP28 GOLGB1 0.006 golgi autoantigen, golgin subfamily b, macrogolgin ... LYST 0.006 lysosomal trafficking regulator IMMT 0.006 inner membrane protein, mitochondrial isoform 3 [Ho... IMMT 0.006 inner membrane protein, mitochondrial isoform 2 [Ho... IMMT 0.006 inner membrane protein, mitochondrial isoform 1 [Ho... IQGAP2 0.006 IQ motif containing GTPase activating protein 2 [Ho... TRIM65 0.006 tripartite motif-containing 65 TIMM44 0.006 translocase of inner mitochondrial membrane 44 [Homo... ACCN5 0.006 amiloride-sensitive cation channel 5, intestinal [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.