TRPM1 37526

Name: TRPM1	Sequence: fasta or formatted (1603aa)		NCBI GI: 94538366
Description: transient receptor potential cation channel, subfamily M, member 1		Referenced in: Calcium and TRP Cation Channels
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 81 2 C cysteine 1.5 24 3 D aspartate 5.2 84 2 E glutamate 8.0 128 3 F phenylalanine 3.2 51 2 G glycine 5.9 95 3 H histidine 2.4 38 2 I isoleucine 6.4 102 3 K lysine 7.7 123 8 L leucine 10.5 168 3 M methionine 3.2 52 2 N asparagine 4.2 67 2 P proline 4.4 71 3 Q glutamine 4.3 69 2 R arginine 4.8 77 2 S serine 7.2 116 3 T threonine 5.1 81 2 V valine 6.3 101 2 W tryptophan 1.4 22 1 Y tyrosine 3.3 53 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transient receptor potential cation channel, subfami... TRPM3 0.379 transient receptor potential cation channel, subfam... TRPM3 0.379 transient receptor potential cation channel, subfam... TRPM3 0.379 transient receptor potential cation channel, subfam... TRPM3 0.376 transient receptor potential cation channel, subfam... TRPM3 0.371 transient receptor potential cation channel, subfam... TRPM3 0.371 transient receptor potential cation channel, subfam... TRPM3 0.368 transient receptor potential cation channel, subfam... TRPM7 0.359 transient receptor potential cation channel, subfam... TRPM6 0.253 transient receptor potential cation channel, subfami... TRPM3 0.121 transient receptor potential cation channel, subfami... TRPM3 0.117 transient receptor potential cation channel, subfami... TRPM5 0.091 transient receptor potential cation channel, subfami... TRPM4 0.090 transient receptor potential cation channel, subfami... TRPM2 0.085 transient receptor potential cation channel, subfamil... TRPM8 0.071 transient receptor potential cation channel, subfam... TRPC4 0.020 transient receptor potential cation channel, subfam... TRPC4 0.020 transient receptor potential cation channel, subfam... TRPC4 0.020 transient receptor potential cation channel, subfamil... TRPC4 0.019 transient receptor potential cation channel, subfam... TRPC4 0.019 transient receptor potential cation channel, subfam... TRPC5 0.019 transient receptor potential cation channel, subfamil... TRPC4 0.017 transient receptor potential cation channel, subfam... TRPC6 0.013 transient receptor potential cation channel, subfamil... TRPC3 0.012 transient receptor potential cation channel, subfam... TRPC3 0.012 transient receptor potential cation channel, subfamil... TRPC7 0.011 transient receptor potential cation channel, subfamil... TRPC1 0.010 transient receptor potential cation channel, subfamil... TRPV3 0.008 transient receptor potential cation channel, subfami... TRPV6 0.007 transient receptor potential cation channel, subfami... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.