Guide to the Human Genome
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Name: ARL2BP Sequence: fasta or formatted (163aa) NCBI GI: 6912268
Description:

binder of Arl Two

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         11           2
 C cysteine            0.6          1           1
 D aspartate           8.6         14           2
 E glutamate          11.0         18           2
 F phenylalanine       8.6         14           1
 G glycine             3.7          6           1
 H histidine           1.8          3           2
 I isoleucine          4.9          8           2
 K lysine              4.3          7           1
 L leucine            12.9         21           2
 M methionine          3.7          6           1
 N asparagine          3.7          6           2
 P proline             1.8          3           1
 Q glutamine           3.7          6           1
 R arginine            3.1          5           1
 S serine              8.0         13           3
 T threonine           4.9          8           3
 V valine              3.7          6           2
 W tryptophan          0.0          0           0
 Y tyrosine            4.3          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   binder of Arl Two 
LOC646879             0.678   PREDICTED: similar to hCG1780976 
LOC646879             0.678   PREDICTED: similar to hCG1780976 
LOC646879             0.678   PREDICTED: similar to hCG1780976 
CCDC104               0.064   coiled-coil domain containing 104 
RAG1                  0.013   recombination activating gene 1 
BRPF1                 0.010   bromodomain and PHD finger-containing protein 1 isof...
AP1S3                 0.010   adaptor-related protein complex 1, sigma 3 subunit [...
CUL9                  0.007   p53-associated parkin-like cytoplasmic protein [Homo...
PLCB1                 0.007   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.007   phosphoinositide-specific phospholipase C beta 1 iso...
SEPSECS               0.007   Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN...
SEPSECS               0.007   Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN...
SEPSECS               0.007   Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN...
UTP14C                0.007   UTP14, U3 small nucleolar ribonucleoprotein, homolog...
DDX39                 0.007   DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 
C6orf138              0.007   hypothetical protein LOC442213 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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