Search of human proteins with 169204777

Search of human proteins with 169204777

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
         (327 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   661   0.0  
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            661   0.0  
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            661   0.0  
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           396   e-110
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]           266   2e-71
gi|16933567 mel transforming oncogene [Homo sapiens]                  262   4e-70
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      248   4e-66
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   219   3e-57
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          214   1e-55
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]           196   2e-50
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]          191   8e-49
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]          186   2e-47
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...   185   4e-47
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]           184   9e-47
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]           183   2e-46
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]          182   3e-46
gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                    182   4e-46
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]           182   5e-46
gi|50234889 RAB43 protein [Homo sapiens]                              179   2e-45
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]         178   5e-45
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]         174   7e-44
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa...   171   8e-43
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]        171   1e-42
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                 171   1e-42
gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]         167   9e-42
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          166   2e-41
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]          164   1e-40
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]         162   3e-40
gi|5729997 RAB27B, member RAS oncogene family [Homo sapiens]          161   6e-40
gi|19923483 GTPase Rab14 [Homo sapiens]                               160   1e-39

>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  661 bits (1705), Expect = 0.0
 Identities = 327/327 (100%), Positives = 327/327 (100%)

Query: 1   MGIGAVFTLPLGHGTITLSATYLNASSLFVLDQSSAGRADSQSPYRVQCLQHCNFTSPAL 60
           MGIGAVFTLPLGHGTITLSATYLNASSLFVLDQSSAGRADSQSPYRVQCLQHCNFTSPAL
Sbjct: 1   MGIGAVFTLPLGHGTITLSATYLNASSLFVLDQSSAGRADSQSPYRVQCLQHCNFTSPAL 60

Query: 61  RVLEKGRGQRRYVRLHPESIIPLVCKEWDPCAPGLYVRSSGSVEEICTYGRAHPIPSPAP 120
           RVLEKGRGQRRYVRLHPESIIPLVCKEWDPCAPGLYVRSSGSVEEICTYGRAHPIPSPAP
Sbjct: 61  RVLEKGRGQRRYVRLHPESIIPLVCKEWDPCAPGLYVRSSGSVEEICTYGRAHPIPSPAP 120

Query: 121 PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKK 180
           PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKK
Sbjct: 121 PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKK 180

Query: 181 IKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEH 240
           IKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEH
Sbjct: 181 IKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEH 240

Query: 241 LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGR 300
           LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGR
Sbjct: 241 LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGR 300

Query: 301 RSGNGNKPPSTDLKTCDIKNTNKCSLS 327
           RSGNGNKPPSTDLKTCDIKNTNKCSLS
Sbjct: 301 RSGNGNKPPSTDLKTCDIKNTNKCSLS 327


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  661 bits (1705), Expect = 0.0
 Identities = 327/327 (100%), Positives = 327/327 (100%)

Query: 1   MGIGAVFTLPLGHGTITLSATYLNASSLFVLDQSSAGRADSQSPYRVQCLQHCNFTSPAL 60
           MGIGAVFTLPLGHGTITLSATYLNASSLFVLDQSSAGRADSQSPYRVQCLQHCNFTSPAL
Sbjct: 1   MGIGAVFTLPLGHGTITLSATYLNASSLFVLDQSSAGRADSQSPYRVQCLQHCNFTSPAL 60

Query: 61  RVLEKGRGQRRYVRLHPESIIPLVCKEWDPCAPGLYVRSSGSVEEICTYGRAHPIPSPAP 120
           RVLEKGRGQRRYVRLHPESIIPLVCKEWDPCAPGLYVRSSGSVEEICTYGRAHPIPSPAP
Sbjct: 61  RVLEKGRGQRRYVRLHPESIIPLVCKEWDPCAPGLYVRSSGSVEEICTYGRAHPIPSPAP 120

Query: 121 PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKK 180
           PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKK
Sbjct: 121 PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKK 180

Query: 181 IKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEH 240
           IKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEH
Sbjct: 181 IKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEH 240

Query: 241 LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGR 300
           LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGR
Sbjct: 241 LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGR 300

Query: 301 RSGNGNKPPSTDLKTCDIKNTNKCSLS 327
           RSGNGNKPPSTDLKTCDIKNTNKCSLS
Sbjct: 301 RSGNGNKPPSTDLKTCDIKNTNKCSLS 327


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  661 bits (1705), Expect = 0.0
 Identities = 327/327 (100%), Positives = 327/327 (100%)

Query: 1   MGIGAVFTLPLGHGTITLSATYLNASSLFVLDQSSAGRADSQSPYRVQCLQHCNFTSPAL 60
           MGIGAVFTLPLGHGTITLSATYLNASSLFVLDQSSAGRADSQSPYRVQCLQHCNFTSPAL
Sbjct: 1   MGIGAVFTLPLGHGTITLSATYLNASSLFVLDQSSAGRADSQSPYRVQCLQHCNFTSPAL 60

Query: 61  RVLEKGRGQRRYVRLHPESIIPLVCKEWDPCAPGLYVRSSGSVEEICTYGRAHPIPSPAP 120
           RVLEKGRGQRRYVRLHPESIIPLVCKEWDPCAPGLYVRSSGSVEEICTYGRAHPIPSPAP
Sbjct: 61  RVLEKGRGQRRYVRLHPESIIPLVCKEWDPCAPGLYVRSSGSVEEICTYGRAHPIPSPAP 120

Query: 121 PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKK 180
           PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKK
Sbjct: 121 PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKK 180

Query: 181 IKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEH 240
           IKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEH
Sbjct: 181 IKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEH 240

Query: 241 LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGR 300
           LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGR
Sbjct: 241 LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGR 300

Query: 301 RSGNGNKPPSTDLKTCDIKNTNKCSLS 327
           RSGNGNKPPSTDLKTCDIKNTNKCSLS
Sbjct: 301 RSGNGNKPPSTDLKTCDIKNTNKCSLS 327


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  396 bits (1017), Expect = e-110
 Identities = 198/202 (98%), Positives = 198/202 (98%)

Query: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184
           MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ
Sbjct: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60

Query: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244
           VWDTAGQERFKTITTAYYRGAMGIIL YDITDEKSFENIQNWMKSI ENASAGVE LLLG
Sbjct: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120

Query: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304
           NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180

Query: 305 GNKPPSTDLKTCDIKNTNKCSL 326
           GNKPPSTDLKTCD KNTNKCSL
Sbjct: 181 GNKPPSTDLKTCDKKNTNKCSL 202


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  266 bits (680), Expect = 2e-71
 Identities = 129/206 (62%), Positives = 168/206 (81%), Gaps = 4/206 (1%)

Query: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184
           MAK YD+LFKLLLIGDSGVGKTCL+ RF+ED FN T+ISTIGIDFKIRT++++GKKIKLQ
Sbjct: 1   MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60

Query: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244
           +WDTAGQERF+TITTAYYRGAMGI+L YDIT+EKSF+NI+NW+++I E+AS+ VE ++LG
Sbjct: 61  IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG 120

Query: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304
           NKCDM  KR+V KE+ +KLA ++GI+F ETSAKSS NV+EAF +LARDI+ K   + + +
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDS 180

Query: 305 GNKPPSTDLKTCDIKNTN----KCSL 326
            +      +K  + ++      +CSL
Sbjct: 181 NSAGAGGPVKITENRSKKTSFFRCSL 206


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score =  262 bits (669), Expect = 4e-70
 Identities = 123/190 (64%), Positives = 162/190 (85%)

Query: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184
           MAK YD+LFKLLLIGDSGVGKTC++ RF+ED FN+T+ISTIGIDFKIRT++++GK+IKLQ
Sbjct: 1   MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60

Query: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244
           +WDTAGQERF+TITTAYYRGAMGI+L YDIT+EKSF+NI+NW+++I E+ASA VE ++LG
Sbjct: 61  IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120

Query: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304
           NKCD+  KR+V KE+ +KLA ++GI+F ETSAK+++NV+ AF +LARDI  K   +  GN
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180

Query: 305 GNKPPSTDLK 314
             +  +  +K
Sbjct: 181 SPQGSNQGVK 190


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  248 bits (634), Expect = 4e-66
 Identities = 118/180 (65%), Positives = 151/180 (83%)

Query: 127 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 186
           K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TV+++GKKIKLQ+W
Sbjct: 4   KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63

Query: 187 DTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNK 246
           DTAGQERF TITT+YYRGAMGI+L YDIT+ KSFENI  W+++I E+A+  VE +LLGNK
Sbjct: 64  DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123

Query: 247 CDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGN 306
           CDM+ KR V K +  ++AREHGIRFFETSAK+++N+++AF +LA DIL K+  +   + N
Sbjct: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  219 bits (558), Expect = 3e-57
 Identities = 101/200 (50%), Positives = 148/200 (74%)

Query: 122 VSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI 181
           +S+M   YD+LFKLLLIGDSGVGK+CL++RFA+D +  +YISTIG+DFKIRT++++GK I
Sbjct: 1   MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 60

Query: 182 KLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHL 241
           KLQ+WDTAGQERF+TIT++YYRGA GII+ YD+TD++SF N++ W++ I   AS  V  L
Sbjct: 61  KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL 120

Query: 242 LLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRR 301
           L+GNKCD+  K+ V    A + A   GI F ETSAK++ NV+++F ++A +I  + G   
Sbjct: 121 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA 180

Query: 302 SGNGNKPPSTDLKTCDIKNT 321
           +  G +  +  +++  +K +
Sbjct: 181 TAGGAEKSNVKIQSTPVKQS 200


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  214 bits (544), Expect = 1e-55
 Identities = 99/184 (53%), Positives = 138/184 (75%)

Query: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184
           M   YD+LFKLLLIGDSGVGK+CL++RFA+D +  +YISTIG+DFKIRT++++GK IKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60

Query: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244
           +WDTAGQERF+TIT++YYRGA GII+ YD+TD++S+ N++ W++ I   AS  V  LL+G
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120

Query: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304
           NK D+  K+ V    A + A   GI F ETSAK++ NV++AF ++A +I  + G   +  
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180

Query: 305 GNKP 308
           G +P
Sbjct: 181 GERP 184


>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  196 bits (499), Expect = 2e-50
 Identities = 92/170 (54%), Positives = 130/170 (76%), Gaps = 1/170 (0%)

Query: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184
           MA+ YDHLFKLL+IGDSGVGK+ L++RFA++ F+ +YI+TIG+DFKIRTV+I G+K+KLQ
Sbjct: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60

Query: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244
           +WDTAGQERF+TIT+ YYRG  G+I+ YD+T  +SF N++ W+  I +N    V  +L+G
Sbjct: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119

Query: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 294
           NK D   ++ V+ E A K A + GI+ FETSAK ++NV+E F+ +   +L
Sbjct: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVL 169


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score =  191 bits (485), Expect = 8e-49
 Identities = 90/185 (48%), Positives = 134/185 (72%), Gaps = 1/185 (0%)

Query: 114 PIPSPAPPVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIR 172
           P+    P +      YD  FK++L+GDSGVGKTCL++RF +  F   T+IST+GIDF+ +
Sbjct: 45  PLQPGRPSLGGGVDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNK 104

Query: 173 TVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIME 232
            +D++G K+KLQ+WDTAGQERF+++T AYYR A  ++L YD+T++ SF+NIQ W+  I E
Sbjct: 105 VLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHE 164

Query: 233 NASAGVEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARD 292
            A   V  +LLGNK D   +R V++E  +KLA+E+G+ F ETSAK+ +NVD AF+++A++
Sbjct: 165 YAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKE 224

Query: 293 ILLKS 297
           +  +S
Sbjct: 225 LKQRS 229


>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
          Length = 227

 Score =  186 bits (473), Expect = 2e-47
 Identities = 85/161 (52%), Positives = 119/161 (73%)

Query: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188
           +D++FKLL+IG+S VGKT  + R+A+D+F + ++ST+GIDFK++TV    K+IKLQ+WDT
Sbjct: 27  FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDT 86

Query: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248
           AGQER++TITTAYYRGAMG IL YDIT+E+SF  +Q+W   I   +    + +L+GNKCD
Sbjct: 87  AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCD 146

Query: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 289
           ME +R +  E+   L  + G  FFETSAK ++NV + F  L
Sbjct: 147 MEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERL 187


>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score =  185 bits (470), Expect = 4e-47
 Identities = 87/184 (47%), Positives = 134/184 (72%), Gaps = 4/184 (2%)

Query: 116 PSPAPPVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTV 174
           P  +PP S    +YD   K++L+GD+GVGKTC +I+F +  F + T+I+T+GIDF+ + V
Sbjct: 16  PERSPPCSP---SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVV 72

Query: 175 DIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENA 234
            ++G ++KLQ+WDTAGQERF+++T AYYR A  ++L YDIT++ SF+NI+ W+  I E A
Sbjct: 73  TVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYA 132

Query: 235 SAGVEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 294
              V  +LLGNK DM ++R ++ E  + LARE+G+ F ETSAK+ MNV+ AF ++A+++ 
Sbjct: 133 QRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELK 192

Query: 295 LKSG 298
            ++G
Sbjct: 193 YRAG 196


>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
          Length = 220

 Score =  184 bits (467), Expect = 9e-47
 Identities = 85/161 (52%), Positives = 118/161 (73%)

Query: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188
           +D++FK+L+IG+S VGKT  + R+A+D+F   ++ST+GIDFK++T+    K+IKLQ+WDT
Sbjct: 19  FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 78

Query: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248
           AGQER++TITTAYYRGAMG IL YDIT+E+SF  +Q+W   I   +    + LL+GNKCD
Sbjct: 79  AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 138

Query: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 289
           ME +R V  E+  +LA   G  FFE SAK ++NV + F  L
Sbjct: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERL 179


>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  183 bits (465), Expect = 2e-46
 Identities = 92/197 (46%), Positives = 129/197 (65%), Gaps = 5/197 (2%)

Query: 119 APPVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEG 178
           A P  A  + +D++FKLLLIG+S VGKT  + R+A+D+F   ++ST+GIDFK++TV    
Sbjct: 9   AGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHD 68

Query: 179 KKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGV 238
           K+IKLQ+WDTAGQER++TITTAYYRGAMG +L YDI +++SF  +Q+W   I   +    
Sbjct: 69  KRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNA 128

Query: 239 EHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSG 298
           + +L+GNKCD+E +R V  E   +LA + G  FFE SAK ++NV + F  L   I  K  
Sbjct: 129 QVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMN 188

Query: 299 -----GRRSGNGNKPPS 310
                   SG+  K P+
Sbjct: 189 ESLEPSSSSGSNGKGPA 205


>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  182 bits (463), Expect = 3e-46
 Identities = 85/161 (52%), Positives = 118/161 (73%)

Query: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188
           +D++FKLL+IG+S VGKT  + R+A+D F   ++ST+GIDFK++TV    K++KLQ+WDT
Sbjct: 19  FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDT 78

Query: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248
           AGQER++TITTAYYRGAMG IL YDIT+E+SF  +Q+W   I   +    + +L+GNKCD
Sbjct: 79  AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCD 138

Query: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 289
           ME +R V  E+   LA + G  FFE SAK +++V +AF  L
Sbjct: 139 MEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERL 179


>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score =  182 bits (462), Expect = 4e-46
 Identities = 80/168 (47%), Positives = 128/168 (76%)

Query: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188
           Y +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R V+I+GK+IKLQ+WDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62

Query: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248
           AGQE F++IT +YYRGA G +L YDIT  ++F ++ +W++   +++S+ +  +L+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122

Query: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296
           +E++R V++E+ +  AREHG+ F ETSAK++ NV+EAF + A++I  K
Sbjct: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 170


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  182 bits (461), Expect = 5e-46
 Identities = 80/169 (47%), Positives = 127/169 (75%)

Query: 128 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 187
           AY +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R + I+GK+IKLQ+WD
Sbjct: 2   AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61

Query: 188 TAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKC 247
           TAGQE F++IT +YYRGA G +L YDIT   +F ++  W++   +++++ +  +L+GNK 
Sbjct: 62  TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121

Query: 248 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296
           D+E++R+V+KE+ +  AREHG+ F ETSAK++ NV+EAF + A++I  K
Sbjct: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 170


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score =  179 bits (455), Expect = 2e-45
 Identities = 89/189 (47%), Positives = 128/189 (67%), Gaps = 5/189 (2%)

Query: 112 AHPIPSPAPPVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKI 171
           A P P P  P     + YD LFKL+L+GD+ VGKTC++ RF    F+    STIG+DF +
Sbjct: 2   AGPGPGPGDP----DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTM 57

Query: 172 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIM 231
           +T++I+GK++KLQ+WDTAGQERF+TIT +YYR A G ILAYDIT   SF ++ +W++ + 
Sbjct: 58  KTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVR 117

Query: 232 ENASAGVEHLLLGNKCDMEAKRKVQKEQADKLAREHGIR-FFETSAKSSMNVDEAFSSLA 290
           + A + +  LL+GNK D+   R+V   +A  LA  + I    ETSAK S NV+EAF  +A
Sbjct: 118 KYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVA 177

Query: 291 RDILLKSGG 299
            +++++ GG
Sbjct: 178 TELIMRHGG 186


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score =  178 bits (452), Expect = 5e-45
 Identities = 88/168 (52%), Positives = 120/168 (71%), Gaps = 1/168 (0%)

Query: 130 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTA 189
           D   ++++IG  GVGKT L+ RF +D F     ST+G+DFKI+TV++ GKKI+LQ+WDTA
Sbjct: 40  DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTA 99

Query: 190 GQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDM 249
           GQERF +IT+AYYR A GIIL YDIT +++F+++  WMK I + AS   E LL+GNK D 
Sbjct: 100 GQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDC 159

Query: 250 EAKRKVQKEQADKLARE-HGIRFFETSAKSSMNVDEAFSSLARDILLK 296
           E  R++ ++Q +K A++  G+RF E SAK + NVDE F  L  DIL K
Sbjct: 160 ETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKK 207


>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score =  174 bits (442), Expect = 7e-44
 Identities = 82/170 (48%), Positives = 122/170 (71%), Gaps = 1/170 (0%)

Query: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188
           +D+LFK++LIGDS VGKTC++  F    +  T  +TIG+DF +R++DI+GKK+K+QVWDT
Sbjct: 14  FDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDT 73

Query: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248
           AGQERF+TIT +YYR A   I+AYD+T   +FE+I +W+  I +  +A V  +L+GNKCD
Sbjct: 74  AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCD 133

Query: 249 MEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKS 297
           +  KR V  E A  LA ++G +   ETSAK S N++E F  +A++++ ++
Sbjct: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARN 183


>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
           sapiens]
          Length = 216

 Score =  171 bits (433), Expect = 8e-43
 Identities = 81/171 (47%), Positives = 124/171 (72%), Gaps = 2/171 (1%)

Query: 130 DH-LFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTVDIEGKKIKLQVWD 187
           DH L K +L+GDSGVGKT L+++F +  F   ++ +T+GI F  + V ++G ++KLQ+WD
Sbjct: 19  DHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWD 78

Query: 188 TAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKC 247
           TAGQERF+++T AYYR A  ++L YDIT++ SF+NI+ W+  I E A   V  +LLGNK 
Sbjct: 79  TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKA 138

Query: 248 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSG 298
           DM ++R ++ E  + LARE+G+ F ETSAK+ MNV+ AF ++A+++  ++G
Sbjct: 139 DMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAG 189


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  171 bits (432), Expect = 1e-42
 Identities = 77/165 (46%), Positives = 117/165 (70%)

Query: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188
           YD+LFK++LIGDSGVGK+ L+ RF  + FN    STIG++F  R++ ++GK IK Q+WDT
Sbjct: 8   YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67

Query: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248
           AGQER++ IT+AYYRGA+G +L YDI    ++EN++ W+K + ++A + +  +L+GNK D
Sbjct: 68  AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127

Query: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 293
           +   R V  ++A   A ++ + F ETSA  S NV+EAF ++  +I
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score =  171 bits (432), Expect = 1e-42
 Identities = 77/165 (46%), Positives = 117/165 (70%)

Query: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188
           YD+LFK++LIGDSGVGK+ L+ RF  + FN    STIG++F  R++ ++GK IK Q+WDT
Sbjct: 8   YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67

Query: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248
           AGQER++ IT+AYYRGA+G +L YDI    ++EN++ W+K + ++A + +  +L+GNK D
Sbjct: 68  AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127

Query: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 293
           +   R V  ++A   A ++G+ F ETSA  S NV+ AF ++  +I
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI 172


>gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]
          Length = 213

 Score =  167 bits (424), Expect = 9e-42
 Identities = 81/170 (47%), Positives = 125/170 (73%), Gaps = 4/170 (2%)

Query: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE-GKKIKLQVWDTAGQ 191
           F+L++IGDS VGK+CLI RF E  F      T+G+DF  R V+IE GK+IKLQ+WDTAGQ
Sbjct: 9   FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQ 68

Query: 192 ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASA-GVEHLLLGNKCDME 250
           ERF++IT AYYR ++G +L +DIT+ +SF+N+  W++    +     +  +L+G+KCD++
Sbjct: 69  ERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLD 128

Query: 251 AKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI--LLKSG 298
            +R+V + +A+KLA  +G+++ ETSA+ ++NV++AF+ L RDI  L+K G
Sbjct: 129 TQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRG 178


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  166 bits (421), Expect = 2e-41
 Identities = 80/162 (49%), Positives = 117/162 (72%)

Query: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188
           YD LFK++LIG++GVGKTCL+ RF +  F     +TIG+DF I+TV+I G+K+KLQ+WDT
Sbjct: 6   YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDT 65

Query: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248
           AGQERF++IT +YYR A  +IL YDIT E+SF  +  W++ I + AS  V  +L+GNK D
Sbjct: 66  AGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKID 125

Query: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLA 290
           +  +R+V +++A++ +    + + ETSAK S NV++ F  LA
Sbjct: 126 LAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLA 167


>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  164 bits (414), Expect = 1e-40
 Identities = 78/174 (44%), Positives = 118/174 (67%)

Query: 123 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIK 182
           +AM++ YD LFK L+IG++G GK+CL+ +F E  F +    TIG++F  + +++ GK +K
Sbjct: 4   TAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVK 63

Query: 183 LQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLL 242
           LQ+WDTAGQERF+++T +YYRGA G +L YDIT  +++  + NW+      AS  +  +L
Sbjct: 64  LQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIIL 123

Query: 243 LGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296
            GNK D++A R+V   +A + A+E+ + F ETSA +  NV+EAF   AR IL K
Sbjct: 124 CGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNK 177


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score =  162 bits (411), Expect = 3e-40
 Identities = 78/172 (45%), Positives = 115/172 (66%)

Query: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184
           MA+ YD LFK L+IG +G GK+CL+ +F E+ F      TIG++F  R V++ GK +KLQ
Sbjct: 1   MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60

Query: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244
           +WDTAGQERF+++T +YYRGA G +L YDIT  +++ ++  W+      AS  +  +L G
Sbjct: 61  IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120

Query: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296
           NK D++ +R+V   +A + A+E+ + F ETSA +  NV+EAF   AR IL K
Sbjct: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172


>gi|5729997 RAB27B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  161 bits (408), Expect = 6e-40
 Identities = 86/208 (41%), Positives = 131/208 (62%), Gaps = 28/208 (13%)

Query: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGK--------- 179
           YD+L KLL +GDSGVGKT  + R+ ++ FN  +I+T+GIDF+ + V    +         
Sbjct: 6   YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65

Query: 180 -KIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENA-SAG 237
            K+ LQ+WDTAGQERF+++TTA++R AMG +L +D+T ++SF N++NWM  +  NA    
Sbjct: 66  FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125

Query: 238 VEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 297
            + +L+GNK D+  +R+V + QA +LA ++GI +FETSA +  NV++A  +L  D+++K 
Sbjct: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL-DLIMKR 184

Query: 298 --------------GGRRSGN--GNKPP 309
                          G  SGN  G KPP
Sbjct: 185 MEQCVEKTQIPDTVNGGNSGNLDGEKPP 212


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score =  160 bits (406), Expect = 1e-39
 Identities = 72/165 (43%), Positives = 110/165 (66%)

Query: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188
           Y ++FK ++IGD GVGK+CL+ +F E  F      TIG++F  R +++ G+KIKLQ+WDT
Sbjct: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67

Query: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248
           AGQERF+ +T +YYRGA G ++ YDIT   ++ ++ +W+       +     +L+GNK D
Sbjct: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127

Query: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 293
           +EA+R V  E+A + A E+G+ F E SAK+  NV++AF   A+ I
Sbjct: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,388,556
Number of Sequences: 37866
Number of extensions: 546379
Number of successful extensions: 2153
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 1742
Number of HSP's gapped (non-prelim): 275
length of query: 327
length of database: 18,247,518
effective HSP length: 103
effective length of query: 224
effective length of database: 14,347,320
effective search space: 3213799680
effective search space used: 3213799680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.