Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 169203519

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169203519 PREDICTED: hypothetical protein [Homo sapiens]
         (527 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169203519 PREDICTED: hypothetical protein [Homo sapiens]          1083   0.0  
gi|169202863 PREDICTED: hypothetical protein [Homo sapiens]          1082   0.0  
gi|239744373 PREDICTED: hypothetical protein XP_002343130 [Homo ...   508   e-144
gi|239744369 PREDICTED: similar to hCG1729961 isoform 3 [Homo sa...   501   e-142
gi|239744367 PREDICTED: similar to hCG1729961 isoform 1 [Homo sa...   465   e-131
gi|239744371 PREDICTED: similar to hCG1729961 isoform 2 [Homo sa...   438   e-123
gi|31543157 glycine-N-acyltransferase-like 1 [Homo sapiens]           401   e-112
gi|150010619 glycine-N-acyltransferase-like 2 [Homo sapiens]          240   3e-63
gi|111038137 glycine-N-acyltransferase isoform a [Homo sapiens]       208   1e-53
gi|222831633 glycine N-acyltransferase-like protein 3 [Homo sapi...   154   1e-37
gi|111038143 glycine-N-acyltransferase isoform b [Homo sapiens]       149   6e-36
gi|239744365 PREDICTED: hypothetical protein XP_002343129 [Homo ...    63   8e-10
gi|28178843 TG-interacting factor isoform a [Homo sapiens]             36   0.076
gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo ...    34   0.29 
gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo ...    34   0.29 
gi|211059441 zinc finger protein 843 [Homo sapiens]                    34   0.38 
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]           32   1.1  
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]           32   1.1  
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]           32   1.1  
gi|7019535 B-cell linker isoform 1 [Homo sapiens]                      31   2.4  
gi|169234951 coiled-coil domain containing 17 [Homo sapiens]           31   2.4  
gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]            31   2.4  
gi|123701326 zinc finger protein 831 [Homo sapiens]                    31   2.4  
gi|217035164 coiled-coil domain containing 27 [Homo sapiens]           31   3.2  
gi|169160905 PREDICTED: similar to nuclear transport factor 2 [H...    30   4.2  
gi|189011568 adenomatous polyposis coli [Homo sapiens]                 30   5.4  
gi|189011566 adenomatous polyposis coli [Homo sapiens]                 30   5.4  
gi|53759122 adenomatous polyposis coli [Homo sapiens]                  30   5.4  
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]                 30   5.4  
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]                 30   5.4  

>gi|169203519 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 527

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 527/527 (100%), Positives = 527/527 (100%)

Query: 1   MVYVKDLKEKVPKVWKKYKKQVWQGSGFLARKAFGHFTNSKGYTLAFSKVFSSFRYLKGF 60
           MVYVKDLKEKVPKVWKKYKKQVWQGSGFLARKAFGHFTNSKGYTLAFSKVFSSFRYLKGF
Sbjct: 1   MVYVKDLKEKVPKVWKKYKKQVWQGSGFLARKAFGHFTNSKGYTLAFSKVFSSFRYLKGF 60

Query: 61  EEFVLNIETLSFFLKGSRTEASHKMILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGS 120
           EEFVLNIETLSFFLKGSRTEASHKMILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGS
Sbjct: 61  EEFVLNIETLSFFLKGSRTEASHKMILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGS 120

Query: 121 LFHINHGNPFNMEVLVDSWPGYQMVIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLK 180
           LFHINHGNPFNMEVLVDSWPGYQMVIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLK
Sbjct: 121 LFHINHGNPFNMEVLVDSWPGYQMVIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLK 180

Query: 181 NSEIINWKQKLQIQGFQESLGEGIKAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLG 240
           NSEIINWKQKLQIQGFQESLGEGIKAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLG
Sbjct: 181 NSEIINWKQKLQIQGFQESLGEGIKAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLG 240

Query: 241 SWAETGHPDDELESETPNFKYAQLNVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCM 300
           SWAETGHPDDELESETPNFKYAQLNVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCM
Sbjct: 241 SWAETGHPDDELESETPNFKYAQLNVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCM 300

Query: 301 LGPEGVPVSWVTMDPSCEIGMGYSVEKYRRRGNATRMMIQMSVLSDTKCFYSSTVQPPEP 360
           LGPEGVPVSWVTMDPSCEIGMGYSVEKYRRRGNATRMMIQMSVLSDTKCFYSSTVQPPEP
Sbjct: 301 LGPEGVPVSWVTMDPSCEIGMGYSVEKYRRRGNATRMMIQMSVLSDTKCFYSSTVQPPEP 360

Query: 361 DVLVPRVLVPGQIPGDFTQTRVQPALGLEVRWSLSLCIIRVELSLLLPKDPAWMLIPPPS 420
           DVLVPRVLVPGQIPGDFTQTRVQPALGLEVRWSLSLCIIRVELSLLLPKDPAWMLIPPPS
Sbjct: 361 DVLVPRVLVPGQIPGDFTQTRVQPALGLEVRWSLSLCIIRVELSLLLPKDPAWMLIPPPS 420

Query: 421 PTPQLQNGSNCHTPKQLGWLFALQLPPARCPSWQSKVWESAKAPRASHSAQLPRSSSLAS 480
           PTPQLQNGSNCHTPKQLGWLFALQLPPARCPSWQSKVWESAKAPRASHSAQLPRSSSLAS
Sbjct: 421 PTPQLQNGSNCHTPKQLGWLFALQLPPARCPSWQSKVWESAKAPRASHSAQLPRSSSLAS 480

Query: 481 TGRQGTPMRRKEQGSDCLVYPGTRELSPWTEWRGEGITETGKGHPDK 527
           TGRQGTPMRRKEQGSDCLVYPGTRELSPWTEWRGEGITETGKGHPDK
Sbjct: 481 TGRQGTPMRRKEQGSDCLVYPGTRELSPWTEWRGEGITETGKGHPDK 527


>gi|169202863 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 527

 Score = 1082 bits (2797), Expect = 0.0
 Identities = 526/527 (99%), Positives = 527/527 (100%)

Query: 1   MVYVKDLKEKVPKVWKKYKKQVWQGSGFLARKAFGHFTNSKGYTLAFSKVFSSFRYLKGF 60
           MVYVKDLKEKVPKVWKKYKKQVWQGSGFLARKAFGHFTNSKGYTLAFSKVFSSFRYLKGF
Sbjct: 1   MVYVKDLKEKVPKVWKKYKKQVWQGSGFLARKAFGHFTNSKGYTLAFSKVFSSFRYLKGF 60

Query: 61  EEFVLNIETLSFFLKGSRTEASHKMILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGS 120
           EEFVLNIETLSFFLKGSRTEASHKMILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGS
Sbjct: 61  EEFVLNIETLSFFLKGSRTEASHKMILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGS 120

Query: 121 LFHINHGNPFNMEVLVDSWPGYQMVIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLK 180
           LFHINHGNPFNMEVLVDSWPGYQMVIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLK
Sbjct: 121 LFHINHGNPFNMEVLVDSWPGYQMVIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLK 180

Query: 181 NSEIINWKQKLQIQGFQESLGEGIKAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLG 240
           NSEIINWKQKLQIQGFQESLGEGI+AAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLG
Sbjct: 181 NSEIINWKQKLQIQGFQESLGEGIRAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLG 240

Query: 241 SWAETGHPDDELESETPNFKYAQLNVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCM 300
           SWAETGHPDDELESETPNFKYAQLNVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCM
Sbjct: 241 SWAETGHPDDELESETPNFKYAQLNVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCM 300

Query: 301 LGPEGVPVSWVTMDPSCEIGMGYSVEKYRRRGNATRMMIQMSVLSDTKCFYSSTVQPPEP 360
           LGPEGVPVSWVTMDPSCEIGMGYSVEKYRRRGNATRMMIQMSVLSDTKCFYSSTVQPPEP
Sbjct: 301 LGPEGVPVSWVTMDPSCEIGMGYSVEKYRRRGNATRMMIQMSVLSDTKCFYSSTVQPPEP 360

Query: 361 DVLVPRVLVPGQIPGDFTQTRVQPALGLEVRWSLSLCIIRVELSLLLPKDPAWMLIPPPS 420
           DVLVPRVLVPGQIPGDFTQTRVQPALGLEVRWSLSLCIIRVELSLLLPKDPAWMLIPPPS
Sbjct: 361 DVLVPRVLVPGQIPGDFTQTRVQPALGLEVRWSLSLCIIRVELSLLLPKDPAWMLIPPPS 420

Query: 421 PTPQLQNGSNCHTPKQLGWLFALQLPPARCPSWQSKVWESAKAPRASHSAQLPRSSSLAS 480
           PTPQLQNGSNCHTPKQLGWLFALQLPPARCPSWQSKVWESAKAPRASHSAQLPRSSSLAS
Sbjct: 421 PTPQLQNGSNCHTPKQLGWLFALQLPPARCPSWQSKVWESAKAPRASHSAQLPRSSSLAS 480

Query: 481 TGRQGTPMRRKEQGSDCLVYPGTRELSPWTEWRGEGITETGKGHPDK 527
           TGRQGTPMRRKEQGSDCLVYPGTRELSPWTEWRGEGITETGKGHPDK
Sbjct: 481 TGRQGTPMRRKEQGSDCLVYPGTRELSPWTEWRGEGITETGKGHPDK 527


>gi|239744373 PREDICTED: hypothetical protein XP_002343130 [Homo
           sapiens]
          Length = 339

 Score =  508 bits (1308), Expect = e-144
 Identities = 256/287 (89%), Positives = 265/287 (92%), Gaps = 8/287 (2%)

Query: 72  FFLKGSRTEASHKMILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGSLFHINHGNPFN 131
           FFLKG RTEASHKMILLNNSE+LLALFKSLARSIPESLKV      YGSLFHINHGNPFN
Sbjct: 25  FFLKGLRTEASHKMILLNNSERLLALFKSLARSIPESLKV------YGSLFHINHGNPFN 78

Query: 132 MEVLVDSWPGYQMVIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKL 191
           MEVLVDSWP YQMVIIRPQKQEMTDDMDSYTNVYR+FSKDPQKSQEVLKNSEIINWKQKL
Sbjct: 79  MEVLVDSWPEYQMVIIRPQKQEMTDDMDSYTNVYRVFSKDPQKSQEVLKNSEIINWKQKL 138

Query: 192 QIQGFQESLGEGIKAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLGSWAETGHPDDE 251
           QIQGFQESLGEGI+AAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLGSWAETGHPDDE
Sbjct: 139 QIQGFQESLGEGIRAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLGSWAETGHPDDE 198

Query: 252 LESETPNFKYAQLNVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWV 311
           LESETPNFKYAQLNVSYSGLVNDNWKLGMNKRSL YIKRCLGALPA CMLGPEGVPVSWV
Sbjct: 199 LESETPNFKYAQLNVSYSGLVNDNWKLGMNKRSLRYIKRCLGALPAACMLGPEGVPVSWV 258

Query: 312 TMDPSCEIGMGYSVEKYRRRGNATRMMIQ-MSVLSDTKC-FYSSTVQ 356
           TMDPSCEIGMGYSVEKYRRRGN TR++++ M  L      FY S ++
Sbjct: 259 TMDPSCEIGMGYSVEKYRRRGNGTRLIMRCMKYLCQKNIPFYGSVLE 305


>gi|239744369 PREDICTED: similar to hCG1729961 isoform 3 [Homo
           sapiens]
          Length = 302

 Score =  501 bits (1289), Expect = e-142
 Identities = 254/286 (88%), Positives = 262/286 (91%), Gaps = 8/286 (2%)

Query: 85  MILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGSLFHINHGNPFNMEVLVDSWPGYQM 144
           MILLNNSEQLLALFKSLARSIPESLKV      YGSLFHINHGNPFNMEVLVDSWPGYQM
Sbjct: 1   MILLNNSEQLLALFKSLARSIPESLKV------YGSLFHINHGNPFNMEVLVDSWPGYQM 54

Query: 145 VIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGI 204
           VIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGI
Sbjct: 55  VIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGI 114

Query: 205 KAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQL 264
           KAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQL
Sbjct: 115 KAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQL 174

Query: 265 NVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWVTMDPSCEIGMGYS 324
           NVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWVTMDPSCEIGMGYS
Sbjct: 175 NVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWVTMDPSCEIGMGYS 234

Query: 325 VEKYRRRGNATRMMIQ-MSVLSDTKC-FYSSTVQPPEPDVLVPRVL 368
           VEKYRRRGNATRMM++ M  L      FY S ++  +  + + + L
Sbjct: 235 VEKYRRRGNATRMMVRYMKYLCQKNIPFYGSVLEENQGAIRMNKAL 280


>gi|239744367 PREDICTED: similar to hCG1729961 isoform 1 [Homo
           sapiens]
          Length = 333

 Score =  465 bits (1197), Expect = e-131
 Identities = 232/274 (84%), Positives = 247/274 (90%), Gaps = 6/274 (2%)

Query: 101 LARSIPESLKVKEQW----EVYGSLFHINHGNPFNMEVLVDSWPGYQMVIIRPQKQEMTD 156
           ++  + E L++KE +    +VYGSLFHINHGNPFNMEVLVDSWPGYQMVIIRPQKQEMTD
Sbjct: 38  VSTDLSEQLRIKEFFLEGLQVYGSLFHINHGNPFNMEVLVDSWPGYQMVIIRPQKQEMTD 97

Query: 157 DMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGIKAAAFSNSVKVE 216
           DMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGIKAAAFSNSVKVE
Sbjct: 98  DMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGIKAAAFSNSVKVE 157

Query: 217 HSRALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQLNVSYSGLVNDNW 276
           HSRALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQLNVSYSGLVNDNW
Sbjct: 158 HSRALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQLNVSYSGLVNDNW 217

Query: 277 KLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWVTMDPSCEIGMGYSVEKYRRRGNATR 336
           KLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWVTMDPSCEIGMGYSVEKYRRRGNATR
Sbjct: 218 KLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWVTMDPSCEIGMGYSVEKYRRRGNATR 277

Query: 337 MMIQ-MSVLSDTKC-FYSSTVQPPEPDVLVPRVL 368
           MM++ M  L      FY S ++  +  + + + L
Sbjct: 278 MMVRYMKYLCQKNIPFYGSVLEENQGAIRMNKAL 311


>gi|239744371 PREDICTED: similar to hCG1729961 isoform 2 [Homo
           sapiens]
          Length = 279

 Score =  438 bits (1126), Expect = e-123
 Identities = 230/286 (80%), Positives = 238/286 (83%), Gaps = 31/286 (10%)

Query: 85  MILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGSLFHINHGNPFNMEVLVDSWPGYQM 144
           MILLNNSEQLLALFKSLARSIPESLKV      YGSLFHINHGNPFNMEVLVDSWPGYQM
Sbjct: 1   MILLNNSEQLLALFKSLARSIPESLKV------YGSLFHINHGNPFNMEVLVDSWPGYQM 54

Query: 145 VIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGI 204
           VIIRPQKQ                        EVLKNSEIINWKQKLQIQGFQESLGEGI
Sbjct: 55  VIIRPQKQV-----------------------EVLKNSEIINWKQKLQIQGFQESLGEGI 91

Query: 205 KAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQL 264
           KAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQL
Sbjct: 92  KAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQL 151

Query: 265 NVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWVTMDPSCEIGMGYS 324
           NVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWVTMDPSCEIGMGYS
Sbjct: 152 NVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWVTMDPSCEIGMGYS 211

Query: 325 VEKYRRRGNATRMMIQ-MSVLSDTKC-FYSSTVQPPEPDVLVPRVL 368
           VEKYRRRGNATRMM++ M  L      FY S ++  +  + + + L
Sbjct: 212 VEKYRRRGNATRMMVRYMKYLCQKNIPFYGSVLEENQGAIRMNKAL 257


>gi|31543157 glycine-N-acyltransferase-like 1 [Homo sapiens]
          Length = 333

 Score =  401 bits (1031), Expect = e-112
 Identities = 194/246 (78%), Positives = 215/246 (87%), Gaps = 2/246 (0%)

Query: 116 EVYGSLFHINHGNPFNMEVLVDSWPGYQMVIIRPQKQEMTDDMDSYTNVYRIFSKDPQKS 175
           +VYGS++HINHGNPFNMEVLVDSWP YQMVIIRPQKQEMTDDMDSYTNVYR+FSK+PQKS
Sbjct: 57  KVYGSVYHINHGNPFNMEVLVDSWPEYQMVIIRPQKQEMTDDMDSYTNVYRMFSKEPQKS 116

Query: 176 QEVLKNSEIINWKQKLQIQGFQESLGEGIKAAAFSNSVKVEHSRALLFVTEDILKLYATN 235
           +EVLKN EI+NWKQ+LQIQG QESLGEGI+ A FS SVKVEHSRALL VTEDILKL A++
Sbjct: 117 EEVLKNCEIVNWKQRLQIQGLQESLGEGIRVATFSKSVKVEHSRALLLVTEDILKLNASS 176

Query: 236 KSKLGSWAETGHPDDELESETPNFKYAQLNVSYSGLVNDNWKLGMNKRSLHYIKRCLGAL 295
           KSKLGSWAETGHPDDE ESETPNFKYAQL+VSYSGLVNDNWK G N+RSLHYIKRC+  L
Sbjct: 177 KSKLGSWAETGHPDDEFESETPNFKYAQLDVSYSGLVNDNWKRGKNERSLHYIKRCIEDL 236

Query: 296 PAVCMLGPEGVPVSWVTMDPSCEIGMGYSVEKYRRRGNATRMMIQ-MSVLSDTKC-FYSS 353
           PA CMLGPEGVPVSWVTMDPSCE+GM YS+EKYRR GN  R+M++ M  L      FY S
Sbjct: 237 PAACMLGPEGVPVSWVTMDPSCEVGMAYSMEKYRRTGNMARVMVRYMKYLRQKNIPFYIS 296

Query: 354 TVQPPE 359
            ++  E
Sbjct: 297 VLEENE 302


>gi|150010619 glycine-N-acyltransferase-like 2 [Homo sapiens]
          Length = 294

 Score =  240 bits (612), Expect = 3e-63
 Identities = 125/249 (50%), Positives = 168/249 (67%), Gaps = 12/249 (4%)

Query: 85  MILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGSLFHINHGNPFNMEVLVDSWPGYQM 144
           M++L+NS++L  L+KSL +SIPES+KV      YG++F+I   NPFNMEVLVD+WP YQ+
Sbjct: 1   MLVLHNSQKLQILYKSLEKSIPESIKV------YGAIFNIKDKNPFNMEVLVDAWPDYQI 54

Query: 145 VIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGI 204
           VI RPQKQEM DD D YTN Y IF+K P K +EVL  S +I+W+Q LQIQG QE L E I
Sbjct: 55  VITRPQKQEMKDDQDHYTNTYHIFTKAPDKLEEVLSYSNVISWEQTLQIQGCQEGLDEAI 114

Query: 205 KAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQL 264
           +  A S SV+V++ + +LF+ E    L   +K+      E    DD  +++  NF    L
Sbjct: 115 RKVATSKSVQVDYMKTILFIPE----LPKKHKTSSNDKMELFEVDD--DNKEGNFSNMFL 168

Query: 265 NVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWVTMDPSCEIGMGYS 324
           + S++GLVN++W  G N+RSL YI+RCL       +LGPEG  VSW+ M+ SCE+ MGY+
Sbjct: 169 DASHAGLVNEHWAFGKNERSLKYIERCLQDFLGFGVLGPEGQLVSWIVMEQSCELRMGYT 228

Query: 325 VEKYRRRGN 333
           V KYR +GN
Sbjct: 229 VPKYRHQGN 237


>gi|111038137 glycine-N-acyltransferase isoform a [Homo sapiens]
          Length = 296

 Score =  208 bits (529), Expect = 1e-53
 Identities = 107/251 (42%), Positives = 153/251 (60%), Gaps = 8/251 (3%)

Query: 85  MILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGSLFHINHGNPFNMEVLVDSWPGYQM 144
           M+ L  ++ L  L KSL +S+P SLKV      YG++FHINHGNPFN++ +VD WP +  
Sbjct: 2   MLPLQGAQMLQMLEKSLRKSLPASLKV------YGTVFHINHGNPFNLKAVVDKWPDFNT 55

Query: 145 VIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGI 204
           V++ PQ+Q+MTDD+D YTN Y+I+SKDPQ  QE L + E+INWKQ LQIQ  Q SL E I
Sbjct: 56  VVVCPQEQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAI 115

Query: 205 KAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQL 264
           +  A   S KV+ ++ +L++  +  K       K    +  G     +  E   FK + +
Sbjct: 116 QNLAAIKSFKVKQTQRILYMAAETAKELTPFLLKSKILSPNGGKPKAINQEM--FKLSSM 173

Query: 265 NVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWVTMDPSCEIGMGYS 324
           +V+++ LVN  W  G N+RS  +I+RC+   P  C+LGPEG PV W  MD + E+ M  +
Sbjct: 174 DVTHAHLVNKFWHFGGNERSQRFIERCIQTFPTCCLLGPEGTPVCWDLMDQTGEMRMAGT 233

Query: 325 VEKYRRRGNAT 335
           + +YR  G  T
Sbjct: 234 LPEYRLHGLVT 244


>gi|222831633 glycine N-acyltransferase-like protein 3 [Homo
           sapiens]
          Length = 288

 Score =  154 bits (390), Expect = 1e-37
 Identities = 88/248 (35%), Positives = 136/248 (54%), Gaps = 23/248 (9%)

Query: 85  MILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGSLFHINHGNPFNMEVLVDSWPGYQM 144
           M++LN S +LL L K L    PESLKV      YG++ +IN GNPF  EV++DSWP ++ 
Sbjct: 1   MLVLNCSTKLLILEKMLKSCFPESLKV------YGAVMNINRGNPFQKEVVLDSWPDFKA 54

Query: 145 VIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGI 204
           VI R Q++  TD++D YTN Y +F KD +  +++L+  ++ NW Q  QIQG Q  L +  
Sbjct: 55  VITRRQREAETDNLDHYTNAYAVFYKDVRAYRQLLEECDVFNWDQVFQIQGLQSELYDVS 114

Query: 205 KAAAFSNSVKVEHSRALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQL 264
           KA A S  + ++           +    A + S + S  +T      L+  +P   Y  L
Sbjct: 115 KAVANSKQLNIK-----------LTSFKAVHFSPVSSLPDTSF----LKGPSPRLTY--L 157

Query: 265 NVSYSGLVNDNWKLGMNKRSLHYIKRCLGALPAVCMLGPEGVPVSWVTMDPSCEIGMGYS 324
           +V+ + L+N  W  G N++ L YI   +   P+VC+   +G PVSW   D    +  GY+
Sbjct: 158 SVANADLLNRTWSRGGNEQCLRYIANLISCFPSVCVRDEKGNPVSWSITDQFATMCHGYT 217

Query: 325 VEKYRRRG 332
           + ++RR+G
Sbjct: 218 LPEHRRKG 225


>gi|111038143 glycine-N-acyltransferase isoform b [Homo sapiens]
          Length = 163

 Score =  149 bits (376), Expect = 6e-36
 Identities = 72/146 (49%), Positives = 100/146 (68%), Gaps = 6/146 (4%)

Query: 85  MILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGSLFHINHGNPFNMEVLVDSWPGYQM 144
           M+ L  ++ L  L KSL +S+P SLKV      YG++FHINHGNPFN++ +VD WP +  
Sbjct: 2   MLPLQGAQMLQMLEKSLRKSLPASLKV------YGTVFHINHGNPFNLKAVVDKWPDFNT 55

Query: 145 VIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGI 204
           V++ PQ+Q+MTDD+D YTN Y+I+SKDPQ  QE L + E+INWKQ LQIQ  Q SL E I
Sbjct: 56  VVVCPQEQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAI 115

Query: 205 KAAAFSNSVKVEHSRALLFVTEDILK 230
           +  A   S KV+ ++ +L++  +  K
Sbjct: 116 QNLAAIKSFKVKQTQRILYMAAETAK 141


>gi|239744365 PREDICTED: hypothetical protein XP_002343129 [Homo
           sapiens]
          Length = 123

 Score = 62.8 bits (151), Expect = 8e-10
 Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 1/57 (1%)

Query: 447 PARCPSWQSKVWESAKAPRASH-SAQLPRSSSLASTGRQGTPMRRKEQGSDCLVYPG 502
           P R    +++  E A+  +AS    +LPR+ SLASTGRQGTPM RK+QGSDCLVYPG
Sbjct: 17  PQRAAPTRNQKAEKARNRQASPIPTRLPRNPSLASTGRQGTPMSRKKQGSDCLVYPG 73


>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
          Length = 401

 Score = 36.2 bits (82), Expect = 0.076
 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 20/81 (24%)

Query: 418 PPSP-----TPQLQNGSNCHTPKQLGWLFALQLPPARCPSWQSKVWE--SAKAPRASHSA 470
           PP+P     TP    GS+C  P           PPARCP  ++   E  +   PR  H  
Sbjct: 61  PPAPWSSLATPSALLGSSCAPPP----------PPARCPQPRALSPELGTKAGPRRPHRW 110

Query: 471 QLPRSSSLASTGRQGTPMRRK 491
           +LPRS    S G QG   RR+
Sbjct: 111 ELPRS---PSQGAQGPAPRRR 128


>gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo
           sapiens]
          Length = 177

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 446 PPARCPSWQSKVWESAKAPR-ASHSAQLP-RSSSLASTGRQGTPMRRKEQ--GSDCLVYP 501
           PP   P   +  W     PR  S +   P R+  L + GR   P RR+E+  G+D  V  
Sbjct: 86  PPRPVPG--AARWRGRPEPRPGSPAGPAPTRARPLGAPGRSAPPARRRERELGTDARVGD 143

Query: 502 GTRELSPWTEWRGEGI 517
           G REL P    R E +
Sbjct: 144 GERELRPDARGRAEAV 159


>gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo
           sapiens]
          Length = 177

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 446 PPARCPSWQSKVWESAKAPR-ASHSAQLP-RSSSLASTGRQGTPMRRKEQ--GSDCLVYP 501
           PP   P   +  W     PR  S +   P R+  L + GR   P RR+E+  G+D  V  
Sbjct: 86  PPRPVPG--AARWRGRPEPRPGSPAGPAPTRARPLGAPGRSAPPARRRERELGTDARVGD 143

Query: 502 GTRELSPWTEWRGEGI 517
           G REL P    R E +
Sbjct: 144 GERELRPDARGRAEAV 159


>gi|211059441 zinc finger protein 843 [Homo sapiens]
          Length = 348

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 4/90 (4%)

Query: 404 SLLLPKDPAWMLIPPPSPTPQLQNGSNCHTPKQLGWLFALQLPPARCPSWQSKVWESAKA 463
           S LLP+ P     PP S  P + +G        LG L   Q+PPA  P+ Q    E A  
Sbjct: 212 STLLPRPPFLYPGPPLSLQPLVPSGLPAVPAVPLGGLEVAQVPPATQPAAQQ---EGAMG 268

Query: 464 PRASHSAQLPRSSSLASTGRQGTPMRRKEQ 493
           PR+  SA      ++ + G    P R+  Q
Sbjct: 269 PRSCASAGRDSREAVQAPG-YPEPARKASQ 297


>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 296

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 415 LIPPPSPTPQLQNGSNCHTPKQLGWLFALQLPPARC 450
           L PPP+  PQ  + +    P QL  L  L LP ARC
Sbjct: 158 LPPPPTSQPQSGHSTEVRAPTQLLGLLVLWLPGARC 193


>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 242

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 415 LIPPPSPTPQLQNGSNCHTPKQLGWLFALQLPPARC 450
           L PPP+  PQ  + +    P QL  L  L LP ARC
Sbjct: 104 LPPPPTSQPQSGHSTEVRAPTQLLGLLVLWLPGARC 139


>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 242

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 415 LIPPPSPTPQLQNGSNCHTPKQLGWLFALQLPPARC 450
           L PPP+  PQ  + +    P QL  L  L LP ARC
Sbjct: 104 LPPPPTSQPQSGHSTEVRAPTQLLGLLVLWLPGARC 139


>gi|7019535 B-cell linker isoform 1 [Homo sapiens]
          Length = 456

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 12/81 (14%)

Query: 417 PPPSPTPQLQNGS--NCHTPKQLGWLFALQLPPARCPSWQSKVWESAKAPRASHSAQLPR 474
           PPP   P +   +  N  TP           PP       S  WE+   P A+ S  LPR
Sbjct: 198 PPPEKAPMVNRSTKPNSSTPAS---------PPGTASGRNSGAWETKSPPPAAPSP-LPR 247

Query: 475 SSSLASTGRQGTPMRRKEQGS 495
           +    +T  + TP+  ++  S
Sbjct: 248 AGKKPTTPLKTTPVASQQNAS 268


>gi|169234951 coiled-coil domain containing 17 [Homo sapiens]
          Length = 590

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 44/158 (27%), Positives = 54/158 (34%), Gaps = 50/158 (31%)

Query: 358 PEPDVLVPRVLVPGQ---IPGDFTQTRVQPALGLEVRWSLSLCIIRVELSLLLPKD---- 410
           P  D+L P    PG    I  DF +       GLE  W      I V+L   L +D    
Sbjct: 350 PTSDMLGPAPYDPGAGLVIFYDFLR-------GLEASW------IWVQLRTGLARDGRDT 396

Query: 411 -------PAWMLIPPPSPTPQLQNGSNCHTPKQLGWLFALQLPPARCPS----------- 452
                  PA  L PPP+P P      NC        + A + P  R P            
Sbjct: 397 GRTTALPPALCLPPPPAPGPM----GNCA-------ILASRQPVPRLPPSSSVSLVCELQ 445

Query: 453 -WQSKVWESAKAPRASHSAQLPRSSSLASTGRQGTPMR 489
            WQ   W  A  P+A  S  L        +GR   P+R
Sbjct: 446 VWQGLAWARAPQPKAWVSLGLFDQDQRVLSGRWRLPLR 483


>gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]
          Length = 4265

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 33/147 (22%), Positives = 56/147 (38%), Gaps = 33/147 (22%)

Query: 82  SHKMILLNNSEQLLALFKSLARSIPESL--------KVKEQWEVYGSLFHINHGNPFNME 133
           S K+    NS + LA  +   + IPE L        KV + ++V     +    + FN +
Sbjct: 851 SRKIYEKPNSIEELAELREWMKGIPERLVGLEERIVKVMDDYQVMDEFLYNLSSDDFNDK 910

Query: 134 VLVDSWPGYQMVIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQI 193
            +  +WP   +  I   +Q+  +D + +  +                        Q +  
Sbjct: 911 WIASNWPSKILGQIELVQQQHVEDEEKFRKI------------------------QIMDQ 946

Query: 194 QGFQESLGEGIKAAAFSNSVKVEHSRA 220
             FQE L EG++      S+ VE SRA
Sbjct: 947 NNFQEKL-EGLQLVVAGFSIHVEISRA 972


>gi|123701326 zinc finger protein 831 [Homo sapiens]
          Length = 1677

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 395  SLCIIRVELSLLLPKDPAWMLIPPPSPTPQLQN-----GSNCHTPKQLG-WLFALQLPPA 448
            +L   R+   +L P  P W L  PP   P+  +     G +  +P Q G +L AL  P  
Sbjct: 1083 TLARARLSGDVLNPWVPNWELGEPPGNAPEDPSSGPLVGPDPCSPLQPGSFLTALTRPQG 1142

Query: 449  RCPSWQSKVWESAKAPRASHSAQLPRSS 476
              P W      S      SHS + P S+
Sbjct: 1143 VPPGWPELALSSHSGTSRSHSTRSPHST 1170


>gi|217035164 coiled-coil domain containing 27 [Homo sapiens]
          Length = 656

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)

Query: 21  QVWQGSG--FLARKAFGHFTNSKGYTLAFSKVFSSFRYLK 58
           + W+G+   FLAR+  G  TN  GY L FSK    F YL+
Sbjct: 164 ETWRGTQDLFLARR--GSDTNVDGYLLPFSKSICEFDYLR 201


>gi|169160905 PREDICTED: similar to nuclear transport factor 2 [Homo
           sapiens]
          Length = 340

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 408 PKDPAWMLIPPPSPTPQLQNGSNCHTPKQLGWLFALQLPPARCPSWQSKVWESAKAPRAS 467
           P+ PA ++  PP+P   +  GS C   +++G  F +     R    +S VW S    R++
Sbjct: 145 PRWPASIVSVPPTP---INAGSRCGGFRRVGAAFGVLREQVRRTCLESVVWTSGLWVRSN 201

Query: 468 HSAQLPRSSSLASTG 482
            S Q      L  TG
Sbjct: 202 PSRQDCNRGGLQLTG 216


>gi|189011568 adenomatous polyposis coli [Homo sapiens]
          Length = 2843

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 25/183 (13%)

Query: 332  GNATRMMIQMSVLSDTKCFYSSTVQPPEPDVLVPRVLVPGQIPGDFTQTRVQPALGLEV- 390
            GN     +++S +S TK   S + +   P VLV +     + P    + +++ +   E  
Sbjct: 2407 GNGANKKVELSRMSSTKSSGSESDRSERP-VLVRQSTFIKEAPSPTLRRKLEESASFESL 2465

Query: 391  ---RWSLSLCIIRVELSLLLPKDP-------------AWMLIPPP-SPTPQLQNGSNCHT 433
                   S    + +  +L P  P              W  +PP  SPT +  +G     
Sbjct: 2466 SPSSRPASPTRSQAQTPVLSPSLPDMSLSTHSSVQAGGWRKLPPNLSPTIEYNDG---RP 2522

Query: 434  PKQLGWLFALQLPPARCPSWQSKVWESAKAPRASHSAQLPRSSSLASTGRQGTPMRRKEQ 493
             K+     +    P+R P  +S  W   K   + HS+ LPR S+   TG   + +    +
Sbjct: 2523 AKRHDIARSHSESPSRLPINRSGTW---KREHSKHSSSLPRVSTWRRTGSSSSILSASSE 2579

Query: 494  GSD 496
             S+
Sbjct: 2580 SSE 2582


>gi|189011566 adenomatous polyposis coli [Homo sapiens]
          Length = 2843

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 25/183 (13%)

Query: 332  GNATRMMIQMSVLSDTKCFYSSTVQPPEPDVLVPRVLVPGQIPGDFTQTRVQPALGLEV- 390
            GN     +++S +S TK   S + +   P VLV +     + P    + +++ +   E  
Sbjct: 2407 GNGANKKVELSRMSSTKSSGSESDRSERP-VLVRQSTFIKEAPSPTLRRKLEESASFESL 2465

Query: 391  ---RWSLSLCIIRVELSLLLPKDP-------------AWMLIPPP-SPTPQLQNGSNCHT 433
                   S    + +  +L P  P              W  +PP  SPT +  +G     
Sbjct: 2466 SPSSRPASPTRSQAQTPVLSPSLPDMSLSTHSSVQAGGWRKLPPNLSPTIEYNDG---RP 2522

Query: 434  PKQLGWLFALQLPPARCPSWQSKVWESAKAPRASHSAQLPRSSSLASTGRQGTPMRRKEQ 493
             K+     +    P+R P  +S  W   K   + HS+ LPR S+   TG   + +    +
Sbjct: 2523 AKRHDIARSHSESPSRLPINRSGTW---KREHSKHSSSLPRVSTWRRTGSSSSILSASSE 2579

Query: 494  GSD 496
             S+
Sbjct: 2580 SSE 2582


>gi|53759122 adenomatous polyposis coli [Homo sapiens]
          Length = 2843

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 25/183 (13%)

Query: 332  GNATRMMIQMSVLSDTKCFYSSTVQPPEPDVLVPRVLVPGQIPGDFTQTRVQPALGLEV- 390
            GN     +++S +S TK   S + +   P VLV +     + P    + +++ +   E  
Sbjct: 2407 GNGANKKVELSRMSSTKSSGSESDRSERP-VLVRQSTFIKEAPSPTLRRKLEESASFESL 2465

Query: 391  ---RWSLSLCIIRVELSLLLPKDP-------------AWMLIPPP-SPTPQLQNGSNCHT 433
                   S    + +  +L P  P              W  +PP  SPT +  +G     
Sbjct: 2466 SPSSRPASPTRSQAQTPVLSPSLPDMSLSTHSSVQAGGWRKLPPNLSPTIEYNDG---RP 2522

Query: 434  PKQLGWLFALQLPPARCPSWQSKVWESAKAPRASHSAQLPRSSSLASTGRQGTPMRRKEQ 493
             K+     +    P+R P  +S  W   K   + HS+ LPR S+   TG   + +    +
Sbjct: 2523 AKRHDIARSHSESPSRLPINRSGTW---KREHSKHSSSLPRVSTWRRTGSSSSILSASSE 2579

Query: 494  GSD 496
             S+
Sbjct: 2580 SSE 2582


>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
          Length = 638

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 27/116 (23%), Positives = 41/116 (35%), Gaps = 28/116 (24%)

Query: 406 LLPKDPAWMLIPPPSPTPQLQNGSNCHTPKQLGWLFALQLPPARCPSWQSKVWESAKAPR 465
           ++P  P  M+ PPP P       S    P           P    P WQ +  +    P 
Sbjct: 469 MMPPPPMGMMPPPPPPP------SGQPPPP----------PSGPLPPWQQQQQQPPPPP- 511

Query: 466 ASHSAQLPRSSSLASTGRQGTPMRRKEQGSDCLVYPGTRELSPWTEWRGEGITETG 521
                  P SSS+AS+    TP+  ++  +      GT  + PW + +       G
Sbjct: 512 -------PPSSSMASS----TPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPG 556


>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
          Length = 639

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 27/116 (23%), Positives = 41/116 (35%), Gaps = 28/116 (24%)

Query: 406 LLPKDPAWMLIPPPSPTPQLQNGSNCHTPKQLGWLFALQLPPARCPSWQSKVWESAKAPR 465
           ++P  P  M+ PPP P       S    P           P    P WQ +  +    P 
Sbjct: 469 MMPPPPMGMMPPPPPPP------SGQPPPP----------PSGPLPPWQQQQQQPPPPP- 511

Query: 466 ASHSAQLPRSSSLASTGRQGTPMRRKEQGSDCLVYPGTRELSPWTEWRGEGITETG 521
                  P SSS+AS+    TP+  ++  +      GT  + PW + +       G
Sbjct: 512 -------PPSSSMASS----TPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPG 556


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,658,293
Number of Sequences: 37866
Number of extensions: 1084790
Number of successful extensions: 3226
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 3183
Number of HSP's gapped (non-prelim): 53
length of query: 527
length of database: 18,247,518
effective HSP length: 107
effective length of query: 420
effective length of database: 14,195,856
effective search space: 5962259520
effective search space used: 5962259520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press