Guide to the Human Genome
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Name: LOC390205 Sequence: fasta or formatted (292aa) NCBI GI: 223005922
Description:

leucine rich repeat containing 10-like

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         24           2
 C cysteine            1.0          3           1
 D aspartate           5.1         15           1
 E glutamate           8.9         26           4
 F phenylalanine       3.8         11           1
 G glycine             9.2         27           2
 H histidine           1.0          3           1
 I isoleucine          2.1          6           1
 K lysine              0.7          2           1
 L leucine            18.8         55           2
 M methionine          1.7          5           1
 N asparagine          2.4          7           1
 P proline             8.9         26           3
 Q glutamine           2.7          8           2
 R arginine           13.4         39           2
 S serine              4.1         12           1
 T threonine           2.7          8           1
 V valine              3.1          9           1
 W tryptophan          0.7          2           1
 Y tyrosine            1.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 10-like 
LRRC10                0.298   leucine rich repeat containing 10 
MFHAS1                0.157   malignant fibrous histiocytoma amplified sequence 1...
LRRC7                 0.145   leucine rich repeat containing 7 
SCRIB                 0.143   scribble isoform b 
SCRIB                 0.143   scribble isoform a 
LRRC1                 0.143   leucine rich repeat containing 1 
ERBB2IP               0.141   ERBB2 interacting protein isoform 7 
ERBB2IP               0.141   ERBB2 interacting protein isoform 2 
LRRIQ4                0.134   leucine-rich repeats and IQ motif containing 4 [Hom...
LOC401387             0.130   leucine-rich repeat and death domain-containing pro...
SHOC2                 0.123   soc-2 suppressor of clear homolog 
LRRC30                0.120   leucine rich repeat containing 30 
LRRC40                0.120   leucine rich repeat containing 40 
LRRC58                0.120   leucine rich repeat containing 58 
RSU1                  0.113   ras suppressor protein 1 isoform 1 
LRDD                  0.111   leucine rich repeat and death domain containing prot...
LRDD                  0.111   leucine rich repeat and death domain containing prot...
LRRC39                0.104   leucine rich repeat containing 39 
LRRC69                0.102   leucine rich repeat containing 69 
LRRC8D                0.102   leucine rich repeat containing 8 family, member D [...
LRRC8D                0.102   leucine rich repeat containing 8 family, member D [H...
LRCH4                 0.102   leucine-rich repeats and calponin homology (CH) doma...
RSU1                  0.102   ras suppressor protein 1 isoform 2 
LRRC8E                0.098   leucine rich repeat containing 8 family, member E [H...
LRDD                  0.095   leucine rich repeat and death domain containing prot...
LRCH3                 0.087   leucine-rich repeats and calponin homology (CH) doma...
LGR4                  0.087   leucine-rich repeat-containing G protein-coupled re...
LRRC8A                0.087   leucine rich repeat containing 8 family, member A [H...
LRRC8A                0.087   leucine rich repeat containing 8 family, member A [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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