BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169172738 PREDICTED: similar to sphingomyelin phosphodiesterase 3, neutral membrane [Homo sapiens] (464 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169174355 PREDICTED: similar to sphingomyelin phosphodiestera... 967 0.0 gi|169172738 PREDICTED: similar to sphingomyelin phosphodiestera... 967 0.0 gi|8923946 neutral sphingomyelin phosphodiesterase 3 [Homo sapiens] 224 1e-58 gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 37 0.029 gi|166999223 glutamate receptor, metabotropic 1 isoform beta pre... 37 0.050 gi|166999098 glutamate receptor, metabotropic 1 isoform alpha pr... 37 0.050 gi|27436927 synoviolin 1 isoform b [Homo sapiens] 33 0.55 gi|27436925 synoviolin 1 isoform a [Homo sapiens] 33 0.55 gi|239743851 PREDICTED: hypothetical protein [Homo sapiens] 33 0.72 gi|239743848 PREDICTED: hypothetical protein [Homo sapiens] 33 0.72 gi|239743837 PREDICTED: hypothetical protein [Homo sapiens] 33 0.72 gi|239743815 PREDICTED: hypothetical protein [Homo sapiens] 33 0.72 gi|239743746 PREDICTED: hypothetical protein [Homo sapiens] 33 0.72 gi|52632381 melanoma antigen family D, 1 isoform a [Homo sapiens] 32 0.94 gi|52632379 melanoma antigen family D, 1 isoform b [Homo sapiens] 32 0.94 gi|52632377 melanoma antigen family D, 1 isoform b [Homo sapiens] 32 0.94 gi|239747126 PREDICTED: hypothetical protein XP_002343919 [Homo ... 32 1.2 gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... 32 1.2 gi|239758169 PREDICTED: hypothetical protein [Homo sapiens] 32 1.6 gi|14861860 testicular acid phosphatase precursor [Homo sapiens] 32 1.6 gi|87116681 lysophosphatidylcholine acyltransferase 4 [Homo sapi... 31 2.1 gi|40255047 pleckstrin homology domain containing, family H (wit... 31 2.1 gi|239751430 PREDICTED: hypothetical protein [Homo sapiens] 31 2.7 gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo ... 31 2.7 gi|93204867 G protein-coupled receptor 158 [Homo sapiens] 31 2.7 gi|195963410 MEF2 activating motif and SAP domain containing tra... 30 3.6 gi|25121987 non-SMC condensin I complex, subunit H [Homo sapiens] 30 3.6 gi|150417989 cyclin K isoform 1 [Homo sapiens] 30 3.6 gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 30 3.6 gi|110611151 snurportin 1 [Homo sapiens] 30 4.6 >gi|169174355 PREDICTED: similar to sphingomyelin phosphodiesterase 3, neutral membrane [Homo sapiens] Length = 464 Score = 967 bits (2500), Expect = 0.0 Identities = 464/464 (100%), Positives = 464/464 (100%) Query: 1 MQSPPDWSPATDAPRPSPFPPPALHALHGLARALLFPAYWALHQLQALLLLLLVVGPPLA 60 MQSPPDWSPATDAPRPSPFPPPALHALHGLARALLFPAYWALHQLQALLLLLLVVGPPLA Sbjct: 1 MQSPPDWSPATDAPRPSPFPPPALHALHGLARALLFPAYWALHQLQALLLLLLVVGPPLA 60 Query: 61 LPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEPGRCFVFLTANLCLLPDGQARFG 120 LPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEPGRCFVFLTANLCLLPDGQARFG Sbjct: 61 LPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEPGRCFVFLTANLCLLPDGQARFG 120 Query: 121 NLPHSQRPAEAIGAARPALYRATDCSQPWSRAPRGTLVASLPVGLDFVCLQEVFDLRRAR 180 NLPHSQRPAEAIGAARPALYRATDCSQPWSRAPRGTLVASLPVGLDFVCLQEVFDLRRAR Sbjct: 121 NLPHSQRPAEAIGAARPALYRATDCSQPWSRAPRGTLVASLPVGLDFVCLQEVFDLRRAR 180 Query: 181 RLVNRLAPNLGPLLYDVGTLGLQPGRHLKLLDSGLLLASRYPLLRATFRCFPHARGEDAL 240 RLVNRLAPNLGPLLYDVGTLGLQPGRHLKLLDSGLLLASRYPLLRATFRCFPHARGEDAL Sbjct: 181 RLVNRLAPNLGPLLYDVGTLGLQPGRHLKLLDSGLLLASRYPLLRATFRCFPHARGEDAL 240 Query: 241 ASKGLPSAQARLGSLDGRRIVGFLHCTHLQALAEDGPLRSKQLTPLLDWAEKFGAEKFEA 300 ASKGLPSAQARLGSLDGRRIVGFLHCTHLQALAEDGPLRSKQLTPLLDWAEKFGAEKFEA Sbjct: 241 ASKGLPSAQARLGSLDGRRIVGFLHCTHLQALAEDGPLRSKQLTPLLDWAEKFGAEKFEA 300 Query: 301 DREQSGEVVAFSVLLGDLNFDNCWKDHRLEQEHELFRCFQDPCRLGTRQKQPWALGTALS 360 DREQSGEVVAFSVLLGDLNFDNCWKDHRLEQEHELFRCFQDPCRLGTRQKQPWALGTALS Sbjct: 301 DREQSGEVVAFSVLLGDLNFDNCWKDHRLEQEHELFRCFQDPCRLGTRQKQPWALGTALS 360 Query: 361 TSVLHQSMASSPKMPRRALEQEKGRHLYLAGLPGRSRRAKPWRGRRLDYITYRGVPGWLG 420 TSVLHQSMASSPKMPRRALEQEKGRHLYLAGLPGRSRRAKPWRGRRLDYITYRGVPGWLG Sbjct: 361 TSVLHQSMASSPKMPRRALEQEKGRHLYLAGLPGRSRRAKPWRGRRLDYITYRGVPGWLG 420 Query: 421 LRHWDDPQPDSRPQEVEQVTFSTALEGLTDHRAVRLQLRVSVSS 464 LRHWDDPQPDSRPQEVEQVTFSTALEGLTDHRAVRLQLRVSVSS Sbjct: 421 LRHWDDPQPDSRPQEVEQVTFSTALEGLTDHRAVRLQLRVSVSS 464 >gi|169172738 PREDICTED: similar to sphingomyelin phosphodiesterase 3, neutral membrane [Homo sapiens] Length = 464 Score = 967 bits (2500), Expect = 0.0 Identities = 464/464 (100%), Positives = 464/464 (100%) Query: 1 MQSPPDWSPATDAPRPSPFPPPALHALHGLARALLFPAYWALHQLQALLLLLLVVGPPLA 60 MQSPPDWSPATDAPRPSPFPPPALHALHGLARALLFPAYWALHQLQALLLLLLVVGPPLA Sbjct: 1 MQSPPDWSPATDAPRPSPFPPPALHALHGLARALLFPAYWALHQLQALLLLLLVVGPPLA 60 Query: 61 LPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEPGRCFVFLTANLCLLPDGQARFG 120 LPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEPGRCFVFLTANLCLLPDGQARFG Sbjct: 61 LPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEPGRCFVFLTANLCLLPDGQARFG 120 Query: 121 NLPHSQRPAEAIGAARPALYRATDCSQPWSRAPRGTLVASLPVGLDFVCLQEVFDLRRAR 180 NLPHSQRPAEAIGAARPALYRATDCSQPWSRAPRGTLVASLPVGLDFVCLQEVFDLRRAR Sbjct: 121 NLPHSQRPAEAIGAARPALYRATDCSQPWSRAPRGTLVASLPVGLDFVCLQEVFDLRRAR 180 Query: 181 RLVNRLAPNLGPLLYDVGTLGLQPGRHLKLLDSGLLLASRYPLLRATFRCFPHARGEDAL 240 RLVNRLAPNLGPLLYDVGTLGLQPGRHLKLLDSGLLLASRYPLLRATFRCFPHARGEDAL Sbjct: 181 RLVNRLAPNLGPLLYDVGTLGLQPGRHLKLLDSGLLLASRYPLLRATFRCFPHARGEDAL 240 Query: 241 ASKGLPSAQARLGSLDGRRIVGFLHCTHLQALAEDGPLRSKQLTPLLDWAEKFGAEKFEA 300 ASKGLPSAQARLGSLDGRRIVGFLHCTHLQALAEDGPLRSKQLTPLLDWAEKFGAEKFEA Sbjct: 241 ASKGLPSAQARLGSLDGRRIVGFLHCTHLQALAEDGPLRSKQLTPLLDWAEKFGAEKFEA 300 Query: 301 DREQSGEVVAFSVLLGDLNFDNCWKDHRLEQEHELFRCFQDPCRLGTRQKQPWALGTALS 360 DREQSGEVVAFSVLLGDLNFDNCWKDHRLEQEHELFRCFQDPCRLGTRQKQPWALGTALS Sbjct: 301 DREQSGEVVAFSVLLGDLNFDNCWKDHRLEQEHELFRCFQDPCRLGTRQKQPWALGTALS 360 Query: 361 TSVLHQSMASSPKMPRRALEQEKGRHLYLAGLPGRSRRAKPWRGRRLDYITYRGVPGWLG 420 TSVLHQSMASSPKMPRRALEQEKGRHLYLAGLPGRSRRAKPWRGRRLDYITYRGVPGWLG Sbjct: 361 TSVLHQSMASSPKMPRRALEQEKGRHLYLAGLPGRSRRAKPWRGRRLDYITYRGVPGWLG 420 Query: 421 LRHWDDPQPDSRPQEVEQVTFSTALEGLTDHRAVRLQLRVSVSS 464 LRHWDDPQPDSRPQEVEQVTFSTALEGLTDHRAVRLQLRVSVSS Sbjct: 421 LRHWDDPQPDSRPQEVEQVTFSTALEGLTDHRAVRLQLRVSVSS 464 >gi|8923946 neutral sphingomyelin phosphodiesterase 3 [Homo sapiens] Length = 655 Score = 224 bits (572), Expect = 1e-58 Identities = 137/344 (39%), Positives = 185/344 (53%), Gaps = 27/344 (7%) Query: 133 GAARPALYRATDCSQPWSRAPRGT-------LVASLPVGLDFVCLQEVFDLRRARRLVNR 185 GA LY+A+ + +R R + A P LDF+CLQEVFD R A +L + Sbjct: 318 GANSKLLYKASVVKKAAARRRRHPDEAFDHEVSAFFPANLDFLCLQEVFDKRAATKLKEQ 377 Query: 186 LAPNLGPLLYDVGTLGLQPGRHLKLLDSGLLLASRYPLLRATFRCFPHARGEDALASKGL 245 L +LYDVG G Q K L+SGLL ASRYP++ + C+P+ +DALASKG Sbjct: 378 LHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPIMDVAYHCYPNKCNDDALASKGA 437 Query: 246 PSAQARLGSL-DGRRIVGFLHCTHLQALAEDGPLRSKQLTPLLDWAEKFGAEKFEADREQ 304 + ++GS +RIVG++ CTHL A ED +R QL L DW F + Sbjct: 438 LFLKVQVGSTPQDQRIVGYIACTHLHAPQEDSAIRCGQLDLLQDWLADFRKSTSSSSAAN 497 Query: 305 SGEVVAFSVLLGDLNFDNCWKDHRLEQEHELFRCFQDPCRLGTRQKQPWALGTALSTSVL 364 E+VAF V+ GD NFDNC D +LEQ+H LF ++DPCRLG +++PWA+GT L T+ L Sbjct: 498 PEELVAFDVVCGDFNFDNCSSDDKLEQQHSLFTHYRDPCRLGPGEEKPWAIGTLLDTNGL 557 Query: 365 HQSMASSPKMPRRALEQEKGRHLYLA-------GLPGRSRRAKPWRGRRLDYITYRGVPG 417 + +P ++ LE E+GR YLA G GR K GRR+DY Sbjct: 558 YDEDVCTPDNLQKVLESEEGRREYLAFPTSKSSGQKGRKELLK-GNGRRIDY-------- 608 Query: 418 WLGLRHWDDPQPDSRPQEVEQVTFSTALEGLTDHRAVRLQLRVS 461 + H ++ EVE+ +F T L GLTDH V ++L VS Sbjct: 609 ---MLHAEEGLCPDWKAEVEEFSFITQLSGLTDHLPVAMRLMVS 649 Score = 70.1 bits (170), Expect = 4e-12 Identities = 55/163 (33%), Positives = 70/163 (42%), Gaps = 41/163 (25%) Query: 17 SPFPPPALHALHGLARALLFPAYWALHQLQA----------------------------- 47 +PFP L ALH ++ AL+FP YW + +L A Sbjct: 6 TPFPNSCLSALHCVSWALIFPCYWLVDRLAASFIPTTYEKRQRADDPCCLQLLCTALFTP 65 Query: 48 LLLLLLVVGPPLALPGLPLWLVPQVWRRPFCY---RSPPLCWAPPAL--WRPPAEPGRCF 102 + L LLV P A G W Q RRP+ Y L L W+ PG+ F Sbjct: 66 IYLALLVASLPFAFLGFLFWSPLQSARRPYIYSRLEDKGLAGGAALLSEWKGTG-PGKSF 124 Query: 103 VFLTANLCLLPDGQARFGNLPHSQRPAEAI------GAARPAL 139 F TAN+CLLPD AR NL ++Q A+ I GAARP + Sbjct: 125 CFATANVCLLPDSLARVNNLFNTQARAKEIGQRIRNGAARPQI 167 >gi|146219843 Snf2-related CBP activator protein [Homo sapiens] Length = 3230 Score = 37.4 bits (85), Expect = 0.029 Identities = 41/130 (31%), Positives = 54/130 (41%), Gaps = 9/130 (6%) Query: 3 SPPDWSPATD-APRPSPFPPPALHALHGLARALLFPAYWALHQLQALLLLLLVVGPPLAL 61 +PP SPA + PRP+P P P + AL+ A + A + ++ L Sbjct: 2425 TPPRCSPARERVPRPAPRPRPTPASAPAAIPALVPVPVSAPVPISAPNPITILPVHILPS 2484 Query: 62 PGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEPGRCFVFLTANLCLLPDG---QAR 118 P P + P P C PP C PPA PPA+ C V ++ L L P A Sbjct: 2485 PPPPSQIPP--CSSPAC-TPPPACTPPPAHTPPPAQ--TCLVTPSSPLLLGPPSVPISAS 2539 Query: 119 FGNLPHSQRP 128 NLP RP Sbjct: 2540 VTNLPLGLRP 2549 >gi|166999223 glutamate receptor, metabotropic 1 isoform beta precursor [Homo sapiens] Length = 906 Score = 36.6 bits (83), Expect = 0.050 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 13/128 (10%) Query: 216 LLASRYPLLRATFRCFPHARGEDALASKGLPSAQARLGSLDGRRIVGFLHCTHLQALAED 275 LL +P + P + G L + S+Q + +DG I+G L H Q AE Sbjct: 4 LLLFFFPAIFLEVSLLPRSPGRKVLLAGA--SSQRSVARMDGDVIIGALFSVHHQPPAEK 61 Query: 276 GPLRSKQLTPLLDWAEKFGAEKFEA-----DREQSGEVVAFSVLLGDLNFDNCWKDH-RL 329 P R + E++G ++ EA D+ + V+ ++ LG D+CW L Sbjct: 62 VPERK-----CGEIREQYGIQRVEAMFHTLDKINADPVLLPNITLGSEIRDSCWHSSVAL 116 Query: 330 EQEHELFR 337 EQ E R Sbjct: 117 EQSIEFIR 124 >gi|166999098 glutamate receptor, metabotropic 1 isoform alpha precursor [Homo sapiens] Length = 1194 Score = 36.6 bits (83), Expect = 0.050 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 13/128 (10%) Query: 216 LLASRYPLLRATFRCFPHARGEDALASKGLPSAQARLGSLDGRRIVGFLHCTHLQALAED 275 LL +P + P + G L + S+Q + +DG I+G L H Q AE Sbjct: 4 LLLFFFPAIFLEVSLLPRSPGRKVLLAGA--SSQRSVARMDGDVIIGALFSVHHQPPAEK 61 Query: 276 GPLRSKQLTPLLDWAEKFGAEKFEA-----DREQSGEVVAFSVLLGDLNFDNCWKDH-RL 329 P R + E++G ++ EA D+ + V+ ++ LG D+CW L Sbjct: 62 VPERK-----CGEIREQYGIQRVEAMFHTLDKINADPVLLPNITLGSEIRDSCWHSSVAL 116 Query: 330 EQEHELFR 337 EQ E R Sbjct: 117 EQSIEFIR 124 >gi|27436927 synoviolin 1 isoform b [Homo sapiens] Length = 617 Score = 33.1 bits (74), Expect = 0.55 Identities = 16/36 (44%), Positives = 18/36 (50%) Query: 2 QSPPDWSPATDAPRPSPFPPPALHALHGLARALLFP 37 QSPP PA P P+P PPP L + LL P Sbjct: 341 QSPPPPEPADQGPPPAPHPPPLLPQPPNFPQGLLPP 376 >gi|27436925 synoviolin 1 isoform a [Homo sapiens] Length = 616 Score = 33.1 bits (74), Expect = 0.55 Identities = 16/36 (44%), Positives = 18/36 (50%) Query: 2 QSPPDWSPATDAPRPSPFPPPALHALHGLARALLFP 37 QSPP PA P P+P PPP L + LL P Sbjct: 341 QSPPPPEPADQGPPPAPHPPPLLPQPPNFPQGLLPP 376 >gi|239743851 PREDICTED: hypothetical protein [Homo sapiens] Length = 181 Score = 32.7 bits (73), Expect = 0.72 Identities = 38/129 (29%), Positives = 47/129 (36%), Gaps = 28/129 (21%) Query: 9 PATDAPRPSPFPPPALH--------------ALHGLARALLFPAYWALHQLQ------AL 48 P P P P P ALH L GLA AL +P ++ A+ Sbjct: 15 PCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMKWPWTCLAI 74 Query: 49 LLLLLVVGPPLALPGLPLWLV---PQVWR-----RPFCYRSPPLCWAPPALWRPPAEPGR 100 L ++ PP + P L L L+ P +W R CY SP L W P PG Sbjct: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134 Query: 101 CFVFLTANL 109 F T L Sbjct: 135 TLAFSTLAL 143 >gi|239743848 PREDICTED: hypothetical protein [Homo sapiens] Length = 181 Score = 32.7 bits (73), Expect = 0.72 Identities = 38/129 (29%), Positives = 47/129 (36%), Gaps = 28/129 (21%) Query: 9 PATDAPRPSPFPPPALH--------------ALHGLARALLFPAYWALHQLQ------AL 48 P P P P P ALH L GLA AL +P ++ A+ Sbjct: 15 PCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMKWPWTCLAI 74 Query: 49 LLLLLVVGPPLALPGLPLWLV---PQVWR-----RPFCYRSPPLCWAPPALWRPPAEPGR 100 L ++ PP + P L L L+ P +W R CY SP L W P PG Sbjct: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134 Query: 101 CFVFLTANL 109 F T L Sbjct: 135 TLAFSTLAL 143 >gi|239743837 PREDICTED: hypothetical protein [Homo sapiens] Length = 185 Score = 32.7 bits (73), Expect = 0.72 Identities = 38/129 (29%), Positives = 47/129 (36%), Gaps = 28/129 (21%) Query: 9 PATDAPRPSPFPPPALH--------------ALHGLARALLFPAYWALHQLQ------AL 48 P P P P P ALH L GLA AL +P ++ A+ Sbjct: 15 PCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESMKWPWTCLAI 74 Query: 49 LLLLLVVGPPLALPGLPLWLV---PQVWR-----RPFCYRSPPLCWAPPALWRPPAEPGR 100 L ++ PP + P L L L+ P +W R CY SP L W P PG Sbjct: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134 Query: 101 CFVFLTANL 109 F T L Sbjct: 135 TLAFSTLAL 143 >gi|239743815 PREDICTED: hypothetical protein [Homo sapiens] Length = 185 Score = 32.7 bits (73), Expect = 0.72 Identities = 38/129 (29%), Positives = 47/129 (36%), Gaps = 28/129 (21%) Query: 9 PATDAPRPSPFPPPALH--------------ALHGLARALLFPAYWALHQLQ------AL 48 P P P P P ALH L GLA AL +P ++ A+ Sbjct: 15 PCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESMRWPWTCLAI 74 Query: 49 LLLLLVVGPPLALPGLPLWLV---PQVWR-----RPFCYRSPPLCWAPPALWRPPAEPGR 100 L ++ PP + P L L L+ P +W R CY SP L W P PG Sbjct: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134 Query: 101 CFVFLTANL 109 F T L Sbjct: 135 TLAFSTLAL 143 >gi|239743746 PREDICTED: hypothetical protein [Homo sapiens] Length = 181 Score = 32.7 bits (73), Expect = 0.72 Identities = 38/129 (29%), Positives = 47/129 (36%), Gaps = 28/129 (21%) Query: 9 PATDAPRPSPFPPPALH--------------ALHGLARALLFPAYWALHQLQ------AL 48 P P P P P ALH L GLA AL +P ++ A+ Sbjct: 15 PCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMKWPWTCLAI 74 Query: 49 LLLLLVVGPPLALPGLPLWLV---PQVWR-----RPFCYRSPPLCWAPPALWRPPAEPGR 100 L ++ PP + P L L L+ P +W R CY SP L W P PG Sbjct: 75 LCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPWPGP 134 Query: 101 CFVFLTANL 109 F T L Sbjct: 135 TLAFSTLAL 143 >gi|52632381 melanoma antigen family D, 1 isoform a [Homo sapiens] Length = 834 Score = 32.3 bits (72), Expect = 0.94 Identities = 14/42 (33%), Positives = 19/42 (45%) Query: 58 PLALPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEPG 99 P+ P +W P VW P +++PP PP PP G Sbjct: 409 PVIWPNPIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQG 450 Score = 31.6 bits (70), Expect = 1.6 Identities = 13/38 (34%), Positives = 19/38 (50%) Query: 58 PLALPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPP 95 P+ PG +W P W+ P +++PP PP PP Sbjct: 415 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGPP 452 Score = 30.4 bits (67), Expect = 3.6 Identities = 27/98 (27%), Positives = 35/98 (35%), Gaps = 14/98 (14%) Query: 2 QSPPDWSPATDAPRPSPFPPPALHALHGLARALLFPAYWALHQLQALLLLLLVVGP-PLA 60 Q+PP W P +P P + P W ++ VV P PLA Sbjct: 383 QTPPAWQNPVAWQNPVIWPNPVIWQN---------PVIWP----NPIVWPGPVVWPNPLA 429 Query: 61 LPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEP 98 P W P W+ P ++ PP PP PP P Sbjct: 430 WQNPPGWQTPPGWQTPPGWQGPPDWQGPPDWPLPPDWP 467 Score = 30.0 bits (66), Expect = 4.6 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 57 PPLALPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPA 96 PP A P + LW P W+ P +++ PPA PPA Sbjct: 343 PPGAPPNV-LWQTPLAWQNPSGWQNQTARQTPPARQSPPA 381 Score = 30.0 bits (66), Expect = 4.6 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 57 PPLALPGLPL-WLVPQVWRRPFCYRSPPLCWAPPALWRPPA 96 PP L PL W P W+ ++PP +PPA PPA Sbjct: 347 PPNVLWQTPLAWQNPSGWQNQTARQTPPARQSPPARQTPPA 387 >gi|52632379 melanoma antigen family D, 1 isoform b [Homo sapiens] Length = 778 Score = 32.3 bits (72), Expect = 0.94 Identities = 14/42 (33%), Positives = 19/42 (45%) Query: 58 PLALPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEPG 99 P+ P +W P VW P +++PP PP PP G Sbjct: 353 PVIWPNPIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQG 394 Score = 31.6 bits (70), Expect = 1.6 Identities = 13/38 (34%), Positives = 19/38 (50%) Query: 58 PLALPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPP 95 P+ PG +W P W+ P +++PP PP PP Sbjct: 359 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGPP 396 Score = 30.4 bits (67), Expect = 3.6 Identities = 27/98 (27%), Positives = 35/98 (35%), Gaps = 14/98 (14%) Query: 2 QSPPDWSPATDAPRPSPFPPPALHALHGLARALLFPAYWALHQLQALLLLLLVVGP-PLA 60 Q+PP W P +P P + P W ++ VV P PLA Sbjct: 327 QTPPAWQNPVAWQNPVIWPNPVIWQN---------PVIWP----NPIVWPGPVVWPNPLA 373 Query: 61 LPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEP 98 P W P W+ P ++ PP PP PP P Sbjct: 374 WQNPPGWQTPPGWQTPPGWQGPPDWQGPPDWPLPPDWP 411 Score = 30.0 bits (66), Expect = 4.6 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 57 PPLALPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPA 96 PP A P + LW P W+ P +++ PPA PPA Sbjct: 287 PPGAPPNV-LWQTPLAWQNPSGWQNQTARQTPPARQSPPA 325 Score = 30.0 bits (66), Expect = 4.6 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 57 PPLALPGLPL-WLVPQVWRRPFCYRSPPLCWAPPALWRPPA 96 PP L PL W P W+ ++PP +PPA PPA Sbjct: 291 PPNVLWQTPLAWQNPSGWQNQTARQTPPARQSPPARQTPPA 331 >gi|52632377 melanoma antigen family D, 1 isoform b [Homo sapiens] Length = 778 Score = 32.3 bits (72), Expect = 0.94 Identities = 14/42 (33%), Positives = 19/42 (45%) Query: 58 PLALPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEPG 99 P+ P +W P VW P +++PP PP PP G Sbjct: 353 PVIWPNPIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQG 394 Score = 31.6 bits (70), Expect = 1.6 Identities = 13/38 (34%), Positives = 19/38 (50%) Query: 58 PLALPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPP 95 P+ PG +W P W+ P +++PP PP PP Sbjct: 359 PIVWPGPVVWPNPLAWQNPPGWQTPPGWQTPPGWQGPP 396 Score = 30.4 bits (67), Expect = 3.6 Identities = 27/98 (27%), Positives = 35/98 (35%), Gaps = 14/98 (14%) Query: 2 QSPPDWSPATDAPRPSPFPPPALHALHGLARALLFPAYWALHQLQALLLLLLVVGP-PLA 60 Q+PP W P +P P + P W ++ VV P PLA Sbjct: 327 QTPPAWQNPVAWQNPVIWPNPVIWQN---------PVIWP----NPIVWPGPVVWPNPLA 373 Query: 61 LPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEP 98 P W P W+ P ++ PP PP PP P Sbjct: 374 WQNPPGWQTPPGWQTPPGWQGPPDWQGPPDWPLPPDWP 411 Score = 30.0 bits (66), Expect = 4.6 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 57 PPLALPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPA 96 PP A P + LW P W+ P +++ PPA PPA Sbjct: 287 PPGAPPNV-LWQTPLAWQNPSGWQNQTARQTPPARQSPPA 325 Score = 30.0 bits (66), Expect = 4.6 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 57 PPLALPGLPL-WLVPQVWRRPFCYRSPPLCWAPPALWRPPA 96 PP L PL W P W+ ++PP +PPA PPA Sbjct: 291 PPNVLWQTPLAWQNPSGWQNQTARQTPPARQSPPARQTPPA 331 >gi|239747126 PREDICTED: hypothetical protein XP_002343919 [Homo sapiens] Length = 185 Score = 32.0 bits (71), Expect = 1.2 Identities = 38/129 (29%), Positives = 46/129 (35%), Gaps = 28/129 (21%) Query: 9 PATDAPRPSPFPPPALH--------------ALHGLARALLFPAYWALHQLQ------AL 48 P P P P P ALH L GLA AL +P ++ A+ Sbjct: 15 PCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMKWPWTCLAI 74 Query: 49 LLLLLVVGPPLALPGLPLWLV---PQVWR-----RPFCYRSPPLCWAPPALWRPPAEPGR 100 L V+ PP + P L L L+ P +W CY SP L W P PG Sbjct: 75 LCPCPVLSPPCSGPVLALALLLVLPLLWPCSVFGHALCYPSPALPWPWPYHGLLLPWPGH 134 Query: 101 CFVFLTANL 109 F T L Sbjct: 135 TLAFSTLAL 143 >gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 isoform c [Homo sapiens] Length = 1450 Score = 32.0 bits (71), Expect = 1.2 Identities = 48/160 (30%), Positives = 61/160 (38%), Gaps = 30/160 (18%) Query: 8 SPATDAPRPSPFPPPALHALHGLARALLFPAYWALHQLQAL------LLLLLVVGPPLAL 61 +P+T AP P P PA L L+ + P L +L LL + PP Sbjct: 131 TPSTAAPDPVLPPLPAKRHLAELSVPPVPPRTGPPRLLVSLPTKEEESLLPSLSSPPQPQ 190 Query: 62 PGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEPGRCFVFLTANLCLLPDGQARFGN 121 PL +PQ +P SPP C PP + P +P R F F + Sbjct: 191 SEEPLSTLPQGPPQP---PSPPPC--PPEI---PPKPVRLF--------------PEFDD 228 Query: 122 LPHSQRPAEAIGAARPALYRATDCSQPWSRAPRGTLVASL 161 + + P E GA PA P SR PR VASL Sbjct: 229 SDYDEVPEEGPGA--PARVMTKKEEPPPSRVPRAVRVASL 266 >gi|239758169 PREDICTED: hypothetical protein [Homo sapiens] Length = 181 Score = 31.6 bits (70), Expect = 1.6 Identities = 38/129 (29%), Positives = 46/129 (35%), Gaps = 28/129 (21%) Query: 9 PATDAPRPSPFPPPALH--------------ALHGLARALLFPAYWALHQLQ------AL 48 P P P P P ALH L GLA AL +P ++ A+ Sbjct: 15 PCPSVPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESMKWPWTCLAI 74 Query: 49 LLLLLVVGPPLALPGLPLWLV---PQVWR-----RPFCYRSPPLCWAPPALWRPPAEPGR 100 L V+ PP + P L L L+ P +W CY SP L W P PG Sbjct: 75 LCPGPVLSPPCSGPALALALLLVLPLLWPCSVFGHALCYPSPALPWPWPYHGLLLPWPGP 134 Query: 101 CFVFLTANL 109 F T L Sbjct: 135 TLAFSTLAL 143 >gi|14861860 testicular acid phosphatase precursor [Homo sapiens] Length = 426 Score = 31.6 bits (70), Expect = 1.6 Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Query: 39 YWALHQLQALLLLLLVVGPPLALPGLPLWLVPQVWR 74 +W H LLLLLL+V PP ALP PL V V+R Sbjct: 6 FWG-HPAGPLLLLLLLVLPPRALPEGPLVFVALVFR 40 >gi|87116681 lysophosphatidylcholine acyltransferase 4 [Homo sapiens] Length = 524 Score = 31.2 bits (69), Expect = 2.1 Identities = 12/26 (46%), Positives = 14/26 (53%) Query: 3 SPPDWSPATDAPRPSPFPPPALHALH 28 SP DW+P P P P P +H LH Sbjct: 5 SPGDWAPLDPTPGPPASPNPFVHELH 30 >gi|40255047 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 [Homo sapiens] Length = 793 Score = 31.2 bits (69), Expect = 2.1 Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 4 PPDWSPATDAPRPSPFPPPALHALHG 29 PP P D PRP+P PPP+ L G Sbjct: 564 PPPAPPREDPPRPTPRPPPSAALLAG 589 >gi|239751430 PREDICTED: hypothetical protein [Homo sapiens] Length = 303 Score = 30.8 bits (68), Expect = 2.7 Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 18/67 (26%) Query: 43 HQLQALLLLLLVV-------GPP-LALPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRP 94 H L LLLL LVV GPP PG P +PP WAPP R Sbjct: 73 HVLLFLLLLALVVIVHHFVDGPPGRGGPGQVAAAAP----------APPASWAPPQPGRR 122 Query: 95 PAEPGRC 101 P PG C Sbjct: 123 PTCPGCC 129 >gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo sapiens] Length = 303 Score = 30.8 bits (68), Expect = 2.7 Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 18/67 (26%) Query: 43 HQLQALLLLLLVV-------GPP-LALPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRP 94 H L LLLL LVV GPP PG P +PP WAPP R Sbjct: 73 HVLLFLLLLALVVIVHHFVDGPPGRGGPGQVAAAAP----------APPASWAPPQPGRR 122 Query: 95 PAEPGRC 101 P PG C Sbjct: 123 PTCPGCC 129 >gi|93204867 G protein-coupled receptor 158 [Homo sapiens] Length = 1215 Score = 30.8 bits (68), Expect = 2.7 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 9/37 (24%) Query: 123 PHSQRPAEAIGAARPALYRATDCSQPWSRAPRGTLVA 159 PH+Q+P A A+D S PWSR+ GT++A Sbjct: 44 PHAQQPGRA---------SASDSSAPWSRSTDGTILA 71 >gi|195963410 MEF2 activating motif and SAP domain containing transcriptional regulator isoform 1 [Homo sapiens] Length = 415 Score = 30.4 bits (67), Expect = 3.6 Identities = 32/116 (27%), Positives = 41/116 (35%), Gaps = 17/116 (14%) Query: 57 PPLALPGLPLWLVPQVWRRPFCYRSPPLC--WAPPAL--------WRPPAEPGRCFVFLT 106 PPLA P LP P ++ P C W P WR G LT Sbjct: 45 PPLA-PALPSGTAPFLFSPGVLLPEPEYCPPWRSPKKESPKISQRWRESKPRGN----LT 99 Query: 107 ANLCLLPDGQARFGNLPHSQRPAEAIGAARPALYRATDCSQPWSRAPRGTLVASLP 162 + + P+ R G+ Q A+G P+L+ TD QP R L P Sbjct: 100 YHQYMPPE--PRQGSRADPQAEGSALGPPGPSLWEGTDSQQPHPRMKPSPLTPCPP 153 >gi|25121987 non-SMC condensin I complex, subunit H [Homo sapiens] Length = 741 Score = 30.4 bits (67), Expect = 3.6 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 4/59 (6%) Query: 299 EADREQSGEVVAFSVLLGDLNFD-NCWKDHRLEQEHELFRCFQDPCRLGTRQKQPWALG 356 E D G+ S LGD +FD N DH +HE FR +++PC++ + Q++ +LG Sbjct: 355 EVDESDCGDFPDGS--LGD-DFDANDEPDHTAVGDHEEFRSWKEPCQVQSCQEEMISLG 410 >gi|150417989 cyclin K isoform 1 [Homo sapiens] Length = 580 Score = 30.4 bits (67), Expect = 3.6 Identities = 13/30 (43%), Positives = 15/30 (50%) Query: 4 PPDWSPATDAPRPSPFPPPALHALHGLARA 33 PP P P P P PPP + + GL RA Sbjct: 547 PPAVPPGGQPPVPPPIPPPGMPPVGGLGRA 576 Score = 29.3 bits (64), Expect = 7.9 Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 20/110 (18%) Query: 1 MQSPPDWSPA-TDAPRPSPF---PPPALHALHGLARALLFPAYWALHQLQALL------- 49 +Q PP PA P P P PPP + G++ + + LQ+++ Sbjct: 399 VQIPPPAHPAPVHQPPPLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSY 458 Query: 50 -LLLLVVGPPLALPGLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEP 98 L GPP LP P P PP PPA + PPA P Sbjct: 459 GALPPAYGPPAHLPYHPHVYPPNP--------PPPPVPPPPASFPPPAIP 500 >gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] Length = 538 Score = 30.4 bits (67), Expect = 3.6 Identities = 32/98 (32%), Positives = 37/98 (37%), Gaps = 17/98 (17%) Query: 3 SPPDWSPATDAPRPSPFPPPALHALHGLARALLFPAYWALHQLQALLLLLLVVGPPLALP 62 +P + A P P+P PPPA A ARA A A PP P Sbjct: 118 APAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAA-------------TAPPSPGP 164 Query: 63 GLPLWLVPQVWRRPFCYRSPPLCWAPPALWRPPAEPGR 100 P P+ R PP APPA+ PPA P R Sbjct: 165 AQP---GPRAQRAAPLAAPPPAPAAPPAV-APPAGPRR 198 >gi|110611151 snurportin 1 [Homo sapiens] Length = 360 Score = 30.0 bits (66), Expect = 4.6 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Query: 355 LGTALSTSVLHQSMASSPKMPRRALEQEKGRHLYLAGLPGRSRRAKPWRGRRLDYITYR- 413 L AL++S +S P L Q K ++ L R R + + +RLDY+ + Sbjct: 4 LSQALASSFSVSQDLNSTAAPHPRLSQYKSKYSSLEQSERRRRLLELQKSKRLDYVNHAR 63 Query: 414 --GVPGWLGLRHWDDPQPDSRPQEVEQV 439 W G+ ++ + D +++ V Sbjct: 64 RLAEDDWTGMESEEENKKDDEEMDIDTV 91 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.323 0.140 0.460 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,544,348 Number of Sequences: 37866 Number of extensions: 1152011 Number of successful extensions: 4354 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 4248 Number of HSP's gapped (non-prelim): 97 length of query: 464 length of database: 18,247,518 effective HSP length: 106 effective length of query: 358 effective length of database: 14,233,722 effective search space: 5095672476 effective search space used: 5095672476 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.