LOC392275 8065

Name: LOC392275	Sequence: fasta or formatted (464aa)		NCBI GI: 169174355
Description: PREDICTED: similar to sphingomyelin phosphodiesterase 3, neutral membrane		Referenced in: Sphingomyelin, Ceramides, and Glycolipids
Other entries for this name: alt mRNA [464aa] PREDICTED: similar to sphingomyelin phosphodiesterase 3, neutral ...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 46 2 C cysteine 2.4 11 1 D aspartate 4.7 22 2 E glutamate 3.9 18 1 F phenylalanine 3.9 18 1 G glycine 7.1 33 1 H histidine 3.0 14 1 I isoleucine 0.6 3 1 K lysine 2.2 10 1 L leucine 16.6 77 6 M methionine 0.6 3 1 N asparagine 1.3 6 1 P proline 10.3 48 3 Q glutamine 5.0 23 1 R arginine 10.1 47 2 S serine 5.8 27 2 T threonine 3.2 15 1 V valine 4.7 22 2 W tryptophan 2.8 13 1 Y tyrosine 1.7 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to sphingomyelin phosphodiestera... LOC392275 1.000 PREDICTED: similar to sphingomyelin phosphodiestera... SMPD3 0.211 neutral sphingomyelin phosphodiesterase 3 SRCAP 0.013 Snf2-related CBP activator protein GRM1 0.013 glutamate receptor, metabotropic 1 isoform beta pre... GRM1 0.013 glutamate receptor, metabotropic 1 isoform alpha pr... SYVN1 0.008 synoviolin 1 isoform b SYVN1 0.008 synoviolin 1 isoform a LOC100132670 0.008 PREDICTED: hypothetical protein LOC100132263 0.008 PREDICTED: hypothetical protein LOC100132351 0.008 PREDICTED: hypothetical protein LOC100132427 0.008 PREDICTED: hypothetical protein LOC100132790 0.008 PREDICTED: hypothetical protein MAGED1 0.007 melanoma antigen family D, 1 isoform a MAGED1 0.007 melanoma antigen family D, 1 isoform b MAGED1 0.007 melanoma antigen family D, 1 isoform b LOC100289460 0.007 PREDICTED: hypothetical protein XP_002343919 ARAP1 0.007 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... LOC100132670 0.007 PREDICTED: hypothetical protein ACPT 0.007 testicular acid phosphatase precursor LPCAT4 0.006 lysophosphatidylcholine acyltransferase 4 PLEKHH3 0.006 pleckstrin homology domain containing, family H (wit... LOC100289316 0.006 PREDICTED: hypothetical protein LOC100289316 0.006 PREDICTED: hypothetical protein XP_002343619 GPR158 0.006 G protein-coupled receptor 158 MAMSTR 0.005 MEF2 activating motif and SAP domain containing tra... NCAPH 0.005 non-SMC condensin I complex, subunit H CCNK 0.005 cyclin K isoform 1 SAMD1 0.005 sterile alpha motif domain containing 1 SNUPN 0.005 snurportin 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.