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Search of human proteins with 169172282
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens] 270 3e-73
gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo ... 83 5e-17
gi|239754902 PREDICTED: hypothetical protein [Homo sapiens] 77 4e-15
gi|239749442 PREDICTED: hypothetical protein XP_002347044 [Homo ... 77 4e-15
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 41 2e-04
gi|8567388 period 3 [Homo sapiens] 40 5e-04
gi|21265052 ADAM metallopeptidase with thrombospondin type 1 mot... 39 0.001
gi|110611167 ADAM metallopeptidase with thrombospondin type 1 mo... 39 0.001
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 36 0.009
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 36 0.009
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 36 0.009
gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens] 36 0.009
gi|229089140 leucine rich repeat containing 24 [Homo sapiens] 35 0.012
gi|239753480 PREDICTED: hypothetical protein [Homo sapiens] 35 0.016
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 34 0.027
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 34 0.027
gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo ... 34 0.027
gi|18079216 CASK interacting protein 1 [Homo sapiens] 33 0.045
gi|153281158 dual specificity phosphatase 8 [Homo sapiens] 33 0.045
gi|47132519 Ras association and pleckstrin homology domains 1 is... 33 0.059
gi|32483397 dopamine receptor D4 [Homo sapiens] 33 0.077
gi|153792074 proline rich 12 [Homo sapiens] 33 0.077
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 32 0.10
gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens] 32 0.10
gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens] 32 0.10
gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens] 32 0.10
gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens] 32 0.10
gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo sapi... 32 0.13
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 32 0.13
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 32 0.13
>gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens]
Length = 127
Score = 270 bits (689), Expect = 3e-73
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MADEHQERTLGTSTVFHPGTFTMETLVLMGLVSRHIQLLGIRGRTHRSREAGPTGRGSFC 60
MADEHQERTLGTSTVFHPGTFTMETLVLMGLVSRHIQLLGIRGRTHRSREAGPTGRGSFC
Sbjct: 1 MADEHQERTLGTSTVFHPGTFTMETLVLMGLVSRHIQLLGIRGRTHRSREAGPTGRGSFC 60
Query: 61 DTYCITGLCEVTQLPELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPA 120
DTYCITGLCEVTQLPELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPA
Sbjct: 61 DTYCITGLCEVTQLPELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPA 120
Query: 121 PPGSPAP 127
PPGSPAP
Sbjct: 121 PPGSPAP 127
>gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo
sapiens]
Length = 389
Score = 83.2 bits (204), Expect = 5e-17
Identities = 51/104 (49%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query: 16 FHPGTFTMETLVLMGLVSRHIQLLGIRGRTHRSREAGPTGRGSFCDTYCITGLCEVTQLP 75
FHP TM+TLV+ GLVS + R H S AGP G GSFCDT CIT LCE QLP
Sbjct: 3 FHPRNLTMDTLVIKGLVSPQDTVRDQRPH-HPSSGAGPAGTGSFCDTCCITSLCEWIQLP 61
Query: 76 ELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAP 119
ELT S+P +P + ++ P LQL DPQT T+AP
Sbjct: 62 ELTD--SSPGLQLHDPQ-----SGTSAPPPGLQLHDPQTGTSAP 98
Score = 34.7 bits (78), Expect = 0.020
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 92 PRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPA 126
P+PS+ N S S LQL DPQT T+ APPGSPA
Sbjct: 242 PQPSNWNIS--SPQGLQLHDPQTGTS--APPGSPA 272
Score = 27.7 bits (60), Expect = 2.5
Identities = 21/68 (30%), Positives = 24/68 (35%)
Query: 46 HRSREAGPTGRGSFCDTYCITGLCEVTQLPELTQYHSTPKPHGKNPPRPSDLNSSTGSSP 105
H+ P R + L QL L G+ R SDL S G SP
Sbjct: 321 HQLSPGSPAARSTTLTEEQPHQLLHCLQLHNLRHQWQHQLLRGRPAQRLSDLKGSIGPSP 380
Query: 106 DLQLPDPQ 113
LQL PQ
Sbjct: 381 RLQLHHPQ 388
>gi|239754902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 77.0 bits (188), Expect = 4e-15
Identities = 45/80 (56%), Positives = 51/80 (63%), Gaps = 9/80 (11%)
Query: 41 IRGRTHRSREAGPTGRGSFCDTYCITGLCEVTQLPELTQY-HSTPKPHGKNPPRPSDLNS 99
IRG TH S AGP G GSFCDT IT LCE TQLPELT+Y + K GK +
Sbjct: 78 IRGCTHHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQHQKLTGK--------MN 129
Query: 100 STGSSPDLQLPDPQTPTAAP 119
+T SSP LQL +PQT T+AP
Sbjct: 130 NTSSSPGLQLHNPQTRTSAP 149
>gi|239749442 PREDICTED: hypothetical protein XP_002347044 [Homo
sapiens]
Length = 269
Score = 77.0 bits (188), Expect = 4e-15
Identities = 45/80 (56%), Positives = 51/80 (63%), Gaps = 9/80 (11%)
Query: 41 IRGRTHRSREAGPTGRGSFCDTYCITGLCEVTQLPELTQY-HSTPKPHGKNPPRPSDLNS 99
IRG TH S AGP G GSFCDT IT LCE TQLPELT+Y + K GK +
Sbjct: 78 IRGCTHHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQHQKLTGK--------MN 129
Query: 100 STGSSPDLQLPDPQTPTAAP 119
+T SSP LQL +PQT T+AP
Sbjct: 130 NTSSSPGLQLHNPQTRTSAP 149
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 41.2 bits (95), Expect = 2e-04
Identities = 18/37 (48%), Positives = 19/37 (51%)
Query: 91 PPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
PP PS +SS SP P P P PAPP PAP
Sbjct: 187 PPAPSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAP 223
>gi|8567388 period 3 [Homo sapiens]
Length = 1201
Score = 40.0 bits (92), Expect = 5e-04
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 33 SRHIQLLGIRGRTHRSREAGPTGRGSFCDT--YCITGLCEVTQLPELTQYHSTPKPHGKN 90
S +QL ++ R E+ R + C YC+TG P T ST P +N
Sbjct: 922 SSPLQLNLLQEEMPRPSESPDQMRRNTCPQTEYCVTGNNGSESSPATTGALSTGSPPREN 981
Query: 91 PPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSP 125
P P+ STGS P + +P PTA+ GSP
Sbjct: 982 PSHPTASALSTGSPP---MKNPSHPTASALSTGSP 1013
Score = 30.4 bits (67), Expect = 0.38
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 82 STPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSP 125
ST P KNP P+ STGS P + +P PTA+ G P
Sbjct: 991 STGSPPMKNPSHPTASALSTGSPP---MKNPSHPTASTLSMGLP 1031
>gi|21265052 ADAM metallopeptidase with thrombospondin type 1 motif,
14 isoform 2 preproprotein [Homo sapiens]
Length = 1223
Score = 38.9 bits (89), Expect = 0.001
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Query: 56 RGSFCDTYCITGLCEVTQLPELTQYHSTPKPHGKNP-PRPSDLNSSTGSSPDLQLPDPQT 114
R FC + C + L K G NP P P + S+P LP PQ
Sbjct: 1067 RSVFCQMEVLDRYCSIPGYHRLCCVSCIKKASGPNPGPDPGPTSLPPFSTPGSPLPGPQD 1126
Query: 115 PTAAPAPPGSP 125
P A PPG P
Sbjct: 1127 PADAAEPPGKP 1137
>gi|110611167 ADAM metallopeptidase with thrombospondin type 1 motif,
14 isoform 1 preproprotein [Homo sapiens]
Length = 1226
Score = 38.9 bits (89), Expect = 0.001
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Query: 56 RGSFCDTYCITGLCEVTQLPELTQYHSTPKPHGKNP-PRPSDLNSSTGSSPDLQLPDPQT 114
R FC + C + L K G NP P P + S+P LP PQ
Sbjct: 1070 RSVFCQMEVLDRYCSIPGYHRLCCVSCIKKASGPNPGPDPGPTSLPPFSTPGSPLPGPQD 1129
Query: 115 PTAAPAPPGSP 125
P A PPG P
Sbjct: 1130 PADAAEPPGKP 1140
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 35.8 bits (81), Expect = 0.009
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 82 STPKPHGKNPPRPS--DLNSSTGSSPDLQLPDPQTPTAA-PAPPGSPAP 127
S P PP PS L+ S+ S+P P TP+A PAPP SPAP
Sbjct: 252 SAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAP 300
Score = 32.3 bits (72), Expect = 0.10
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Query: 75 PELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
PE T TP + PP S+ + P+ P P PAPP S AP
Sbjct: 186 PETTAAPPTPSATTQAPP-------SSSAPPETTAAPPTPPATTPAPPSSSAP 231
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 35.8 bits (81), Expect = 0.009
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 82 STPKPHGKNPPRPS--DLNSSTGSSPDLQLPDPQTPTAA-PAPPGSPAP 127
S P PP PS L+ S+ S+P P TP+A PAPP SPAP
Sbjct: 252 SAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAP 300
Score = 32.3 bits (72), Expect = 0.10
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Query: 75 PELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
PE T TP + PP S+ + P+ P P PAPP S AP
Sbjct: 186 PETTAAPPTPSATTQAPP-------SSSAPPETTAAPPTPPATTPAPPSSSAP 231
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 35.8 bits (81), Expect = 0.009
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 82 STPKPHGKNPPRPS--DLNSSTGSSPDLQLPDPQTPTAA-PAPPGSPAP 127
S P PP PS L+ S+ S+P P TP+A PAPP SPAP
Sbjct: 252 SAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAP 300
Score = 32.3 bits (72), Expect = 0.10
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Query: 75 PELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
PE T TP + PP S+ + P+ P P PAPP S AP
Sbjct: 186 PETTAAPPTPSATTQAPP-------SSSAPPETTAAPPTPPATTPAPPSSSAP 231
>gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]
Length = 1426
Score = 35.8 bits (81), Expect = 0.009
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 76 ELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
+++ + PKP + PP P++ + ++ + LQ P P P AP P P P
Sbjct: 223 QISALRNDPKPLPQQPPAPANQDQNSSQNTRLQ-PTPPIPAPAPKPAAPPRP 273
>gi|229089140 leucine rich repeat containing 24 [Homo sapiens]
Length = 513
Score = 35.4 bits (80), Expect = 0.012
Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 13/114 (11%)
Query: 8 RTLGTSTVFHPGTFTMETLVLMGLVSRHIQLLGIRGRTHRSREAGPTGRGSFCDTYCITG 67
R LG +T T + L+ L + + + R R R + GP G G+ + G
Sbjct: 397 RALGVATQ----TAIAAAIALLALTALLLVAMICRRRRRRKKARGPPGEGALFVNDYLDG 452
Query: 68 LCEVTQLPELTQYH-------STPKPHGKNPP--RPSDLNSSTGSSPDLQLPDP 112
C QL EL + KP P P+D G+ P L++P P
Sbjct: 453 PCTFAQLEELRDERGHEMFVINRSKPLFAEGPAEAPADCGPEQGAGPGLRVPPP 506
>gi|239753480 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1344
Score = 35.0 bits (79), Expect = 0.016
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 15/75 (20%)
Query: 66 TGLCEVTQLPELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAP------ 119
TG ++ T +PH +P P N + S P LQL DPQT T+AP
Sbjct: 1010 TGTSAPPRVSSCTTRKLEHQPHSGSPAAPPS-NCNISSPPGLQLHDPQTRTSAPPRVSSC 1068
Query: 120 --------APPGSPA 126
P GSPA
Sbjct: 1069 KALKLEHQLPAGSPA 1083
Score = 30.4 bits (67), Expect = 0.38
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Query: 103 SSPDLQLPDPQTPTAAPAPPG 123
SSP LQL DPQ+ T+AP PPG
Sbjct: 983 SSPGLQLHDPQSGTSAP-PPG 1002
Score = 26.9 bits (58), Expect = 4.2
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 41 IRGRTHRSREAGPTGRG-----SFCDTYCITGLCEVTQLPELTQYHSTPKPHGKNPPRPS 95
IRG T + E G+G + Y C+ +Q ++ S K
Sbjct: 932 IRGHTILAVEQDQLGQGPSVTPAASPAYVNGFSCQNSQSISISTETSQEKCSSPGLQLHD 991
Query: 96 DLNSSTGSSPDLQLPDPQTPTAAP 119
+ ++ P LQL DPQT T+AP
Sbjct: 992 PQSGTSAPPPGLQLHDPQTGTSAP 1015
Score = 26.2 bits (56), Expect = 7.2
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 18/64 (28%)
Query: 73 QLPELTQYHSTPKPHGKNPPR-----PSDLNSSTG------------SSPD-LQLPDPQT 114
QLP +T KP + PP PS N S+ SSP+ LQL DPQT
Sbjct: 1124 QLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPSNWNISSPEGLQLHDPQT 1183
Query: 115 PTAA 118
T+A
Sbjct: 1184 RTSA 1187
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 34.3 bits (77), Expect = 0.027
Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
Query: 75 PELTQYHSTPKPHG-KNPPRPSDLNSSTGSSP-DLQL-------PDPQTPTAAPAPPGSP 125
P L H TP P + P RPS L S + P + QL P PQ PT P PPG
Sbjct: 4300 PVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLEP-PPGRV 4358
Query: 126 AP 127
+P
Sbjct: 4359 SP 4360
Score = 28.1 bits (61), Expect = 1.9
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 62 TYCITGLCEVTQLPELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAP 121
TY ++ L +V QL S P P +PP PS L S S P L + T A P
Sbjct: 4895 TYNVSNL-DVRQL-------SAPPPEEPSPP-PSPLAPSPASPPTEPLVELPTEPLAEPP 4945
Query: 122 PGSPAP 127
SP P
Sbjct: 4946 VPSPLP 4951
Score = 26.6 bits (57), Expect = 5.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 68 LCEVTQLPELTQYHSTPKPHGKN-PPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGS 124
LC V + P H +P+ G + P+P +L+ S + P P+ P +P P S
Sbjct: 779 LCAVPEEP-----HLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEES 831
Score = 26.2 bits (56), Expect = 7.2
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 70 EVTQLPELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQL--PDPQTPTAAPAPPGSPA 126
EV++L L P ++P P S T P+ P P+ +P P SPA
Sbjct: 649 EVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPA 707
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 34.3 bits (77), Expect = 0.027
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 88 GKNPPRPSDLNSSTGSSPDLQL-PDPQTPTAAPAPPGSPA 126
G +P P+ L+ + SS + + P+P P AAP+PP SPA
Sbjct: 311 GGHPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSPA 350
>gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo
sapiens]
Length = 782
Score = 34.3 bits (77), Expect = 0.027
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 72 TQLPELTQYHSTPKPHGKNPPRPSDLNSST-------GSSPDLQLPDPQTPTAAPAPPGS 124
TQ EL TP P K P PS L+ T SSP ++P+P++P P S
Sbjct: 461 TQAKELRLARITPTPSPKLP-EPSVLSEVTKPPPCLENSSPPSRIPEPESPAKPNVPTAS 519
Query: 125 PAP 127
AP
Sbjct: 520 TAP 522
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 33.5 bits (75), Expect = 0.045
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 12/62 (19%)
Query: 75 PELTQYHSTPKPHGKNPPRPSDL-----------NSSTGSSPDLQLPDPQTPTAAPAPPG 123
PE+ + H TP P PP P + S G SP P Q P A PPG
Sbjct: 1258 PEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSP-APSPARQPPAALAKPPG 1316
Query: 124 SP 125
+P
Sbjct: 1317 TP 1318
>gi|153281158 dual specificity phosphatase 8 [Homo sapiens]
Length = 625
Score = 33.5 bits (75), Expect = 0.045
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 17/64 (26%)
Query: 80 YHSTPKPHGKNPPRPSD------LNSSTGSSPDLQLPDPQTPTAAP-----------APP 122
Y + +P G PP P + L+S +G++ L P P +P AAP P
Sbjct: 402 YAPSRRPDGPGPPDPGEAPKLCKLDSPSGAALGLSSPSPDSPDAAPEARPRPRRRPRPPA 461
Query: 123 GSPA 126
GSPA
Sbjct: 462 GSPA 465
Score = 26.6 bits (57), Expect = 5.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 111 DPQTPTAAPAPPGSPA 126
DP TP+ P PP SPA
Sbjct: 309 DPGTPSGTPEPPPSPA 324
>gi|47132519 Ras association and pleckstrin homology domains 1 isoform
1 [Homo sapiens]
Length = 1250
Score = 33.1 bits (74), Expect = 0.059
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 83 TPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPT--------AAPAPPGSPA 126
T P GK PP NSS SS + P+P+ P+ PA GSP+
Sbjct: 963 TSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPS 1014
Score = 32.0 bits (71), Expect = 0.13
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 92 PRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
P+P + T S P LP P P P PP P P
Sbjct: 611 PQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPPP 646
Score = 28.1 bits (61), Expect = 1.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 104 SPDLQLPDPQTPTAAPAPPGSPAP 127
SPD P P++ P PP SP P
Sbjct: 913 SPDFPPPPPESSLVFPPPPPSPVP 936
Score = 26.9 bits (58), Expect = 4.2
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 79 QYHSTPKPHGKNPPRPSDLN---SSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
Q S P P PP P + + SP P P PTA+P P S +P
Sbjct: 905 QPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSP 956
Score = 25.8 bits (55), Expect = 9.4
Identities = 14/39 (35%), Positives = 15/39 (38%)
Query: 89 KNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
K PP P S Q P P TP A + P P P
Sbjct: 849 KPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVP 887
>gi|32483397 dopamine receptor D4 [Homo sapiens]
Length = 419
Score = 32.7 bits (73), Expect = 0.077
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 85 KPHGKNPPRPSDLNSSTGSSPDLQLP-DPQTPTAAPAPPGSP 125
K HG+ P RPS + + P +LP DP P AP PG P
Sbjct: 229 KLHGRAPRRPSGPGPPSPTPPAPRLPQDPCGPDCAPPAPGLP 270
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 32.7 bits (73), Expect = 0.077
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 84 PKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSP 125
P P + PP P + S P L P P +P P PP P
Sbjct: 1465 PTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPP 1506
Score = 30.4 bits (67), Expect = 0.38
Identities = 17/44 (38%), Positives = 19/44 (43%)
Query: 84 PKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
P P P P L + T SSP P P A P+PP P P
Sbjct: 1475 PPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPP 1518
Score = 28.1 bits (61), Expect = 1.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 91 PPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
P PS ++ T P L+ P TP AP P P P
Sbjct: 1437 PGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPP 1473
Score = 27.3 bits (59), Expect = 3.2
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 82 STPKPHGKNPP-RPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
S P P PP +P +T P Q P+ TA P PP P
Sbjct: 1690 SAPPPKAPAPPPKPETPEKTTSEKPPEQTPE----TAMPEPPAPEKP 1732
Score = 26.6 bits (57), Expect = 5.5
Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 22/75 (29%)
Query: 75 PELTQYHSTPKPHG---------------KNPPR--PSDLNSSTGSSPD-----LQLPDP 112
P T + P PHG PP+ PS L+ + SP + L +P
Sbjct: 767 PPPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEP 826
Query: 113 QTPTAAPAPPGSPAP 127
T AP PP P P
Sbjct: 827 ATRDGAPQPPPPPPP 841
Score = 26.6 bits (57), Expect = 5.5
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 88 GKNPPRPSDLNSSTGSSPDLQL----PDPQTPTAAPAPPGSPAP 127
G +P +P +L S+ + P L L P P P PP PAP
Sbjct: 1009 GLDPNKPPELPSTVNAEP-LGLIQSGPHQAAPPPPPPPPPPPAP 1051
Score = 26.2 bits (56), Expect = 7.2
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 11/60 (18%)
Query: 75 PELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPD-------PQTPTAAPAPPGSPAP 127
P L + P P PP P ++++ +P+ L + P PT P PP P P
Sbjct: 1422 PPLAPAAAVPGP----PPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPP 1477
Score = 26.2 bits (56), Expect = 7.2
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 11/47 (23%)
Query: 82 STPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAP--APPGSPA 126
S+P P PP P + S P P P AAP APP PA
Sbjct: 1494 SSPPPPPLPPPPPPAMPSP---------PPPPPPAAAPLAAPPEEPA 1531
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 32.3 bits (72), Expect = 0.10
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 12/60 (20%)
Query: 75 PELTQYHSTPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAA---------PAPPGSP 125
P +H P PH PP+P + P +P PT A P PPG P
Sbjct: 998 PYPLMHHQMPPPH---PPQPGQIPGPGSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMP 1054
Score = 25.8 bits (55), Expect = 9.4
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 6/42 (14%)
Query: 86 PHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
P+G PP P P D P AP PP S AP
Sbjct: 1070 PNGMYPPPPQQ------QPPPPPPADGVPPPPAPGPPASAAP 1105
>gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]
Length = 1083
Score = 32.3 bits (72), Expect = 0.10
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 75 PELTQYHSTPKPHGKNPPRPSD------LNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
P Y TP P P PS N T +P + D +P AAP+P GS P
Sbjct: 842 PSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQP 900
>gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 32.3 bits (72), Expect = 0.10
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 75 PELTQYHSTPKPHGKNPPRPSD------LNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
P Y TP P P PS N T +P + D +P AAP+P GS P
Sbjct: 846 PSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQP 904
>gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 32.3 bits (72), Expect = 0.10
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 75 PELTQYHSTPKPHGKNPPRPSD------LNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
P Y TP P P PS N T +P + D +P AAP+P GS P
Sbjct: 846 PSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQP 904
>gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 32.3 bits (72), Expect = 0.10
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 75 PELTQYHSTPKPHGKNPPRPSD------LNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
P Y TP P P PS N T +P + D +P AAP+P GS P
Sbjct: 846 PSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQP 904
>gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo
sapiens]
Length = 520
Score = 32.0 bits (71), Expect = 0.13
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 83 TPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
+P P ++P P+ S+ SSP P PQ P A APP S P
Sbjct: 292 SPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNA-APPSSVPP 335
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 32.0 bits (71), Expect = 0.13
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 83 TPKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
+P P ++P P+ S+ SSP P PQ P A APP S P
Sbjct: 292 SPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNA-APPSSVPP 335
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 32.0 bits (71), Expect = 0.13
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 8/52 (15%)
Query: 84 PKPHGKNPPRPSDLNSSTGSSPDLQLPD--------PQTPTAAPAPPGSPAP 127
P P+ PP P L SS S P P P P P PPG P P
Sbjct: 337 PPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPP 388
Score = 30.8 bits (68), Expect = 0.29
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 84 PKPHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPAP 127
P PH PP P G+ P P + PTAAP PP P
Sbjct: 292 PPPHNSGPPPPP--ARGRGAPPP---PPSRAPTAAPPPPPPSRP 330
Score = 29.6 bits (65), Expect = 0.65
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 86 PHGKNPPRPSDLNSSTGSSPDLQLPDPQTPTAAPAPPGSPA 126
P G PP PS L + P P P P P PPG P+
Sbjct: 355 PSGPPPPPPSVLGVGPVAPPPP--PPPPPPPGPPPPPGLPS 393
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,295,022
Number of Sequences: 37866
Number of extensions: 454243
Number of successful extensions: 5177
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 352
Number of HSP's that attempted gapping in prelim test: 3260
Number of HSP's gapped (non-prelim): 2109
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.