Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169169847
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169169847 PREDICTED: hypothetical protein [Homo sapiens]
(295 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169169847 PREDICTED: hypothetical protein [Homo sapiens] 605 e-173
gi|169168886 PREDICTED: hypothetical protein [Homo sapiens] 557 e-159
gi|239742988 PREDICTED: hypothetical protein [Homo sapiens] 543 e-155
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 47 2e-05
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 47 2e-05
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 47 3e-05
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 44 2e-04
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 44 2e-04
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 42 6e-04
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 42 6e-04
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 42 6e-04
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 42 6e-04
gi|113419362 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|113418886 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|113419893 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|55956899 keratin 9 [Homo sapiens] 40 0.002
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 40 0.003
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 40 0.003
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 40 0.003
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 40 0.003
gi|5454064 RNA binding motif protein 14 [Homo sapiens] 40 0.003
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens] 40 0.003
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 40 0.003
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 39 0.004
gi|7710121 engrailed homeobox 2 [Homo sapiens] 39 0.004
gi|122937424 one cut homeobox 3 [Homo sapiens] 39 0.004
gi|239756804 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|239751298 PREDICTED: hypothetical protein XP_002347799 [Homo ... 39 0.005
>gi|169169847 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 605 bits (1559), Expect = e-173
Identities = 295/295 (100%), Positives = 295/295 (100%)
Query: 1 MLHRGMQPTAPSRHVHWYLQLLWKDSPLRYTVPPKMQGAPSLAGEEEGKRGVGDAEVRHW 60
MLHRGMQPTAPSRHVHWYLQLLWKDSPLRYTVPPKMQGAPSLAGEEEGKRGVGDAEVRHW
Sbjct: 1 MLHRGMQPTAPSRHVHWYLQLLWKDSPLRYTVPPKMQGAPSLAGEEEGKRGVGDAEVRHW 60
Query: 61 GTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGA 120
GTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGA
Sbjct: 61 GTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGA 120
Query: 121 HADLAVGRGAEVTEEALVRVAGVALGAQLAQLLGADAAAAAAVQHEAHARRTARRWLVRA 180
HADLAVGRGAEVTEEALVRVAGVALGAQLAQLLGADAAAAAAVQHEAHARRTARRWLVRA
Sbjct: 121 HADLAVGRGAEVTEEALVRVAGVALGAQLAQLLGADAAAAAAVQHEAHARRTARRWLVRA 180
Query: 181 PARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHE 240
PARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHE
Sbjct: 181 PARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHE 240
Query: 241 GDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGGISYIFLSFPWPKMIK 295
GDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGGISYIFLSFPWPKMIK
Sbjct: 241 GDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGGISYIFLSFPWPKMIK 295
>gi|169168886 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 557 bits (1435), Expect = e-159
Identities = 276/295 (93%), Positives = 276/295 (93%), Gaps = 17/295 (5%)
Query: 1 MLHRGMQPTAPSRHVHWYLQLLWKDSPLRYTVPPKMQGAPSLAGEEEGKRGVGDAEVRHW 60
MLHRGMQPTAPSRHVHWYLQLLWKDSPLRYTVPPKMQGAPSLAGEEEGKRGVGDAEVRHW
Sbjct: 1 MLHRGMQPTAPSRHVHWYLQLLWKDSPLRYTVPPKMQGAPSLAGEEEGKRGVGDAEVRHW 60
Query: 61 GTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGA 120
GTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGA
Sbjct: 61 GTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGA 120
Query: 121 HADLAVGRGAEVTEEALVRVAGVALGAQLAQLLGADAAAAAAVQHEAHARRTARRWLVRA 180
HADLAVGRGAE LAQLLGADAAAAAAVQHEAHARR ARR LVRA
Sbjct: 121 HADLAVGRGAE-----------------LAQLLGADAAAAAAVQHEAHARRAARRRLVRA 163
Query: 181 PARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHE 240
PARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHE
Sbjct: 164 PARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHE 223
Query: 241 GDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGGISYIFLSFPWPKMIK 295
GDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGGISYIFLSFPWPKMIK
Sbjct: 224 GDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGGISYIFLSFPWPKMIK 278
>gi|239742988 PREDICTED: hypothetical protein [Homo sapiens]
Length = 470
Score = 543 bits (1399), Expect = e-155
Identities = 270/295 (91%), Positives = 270/295 (91%), Gaps = 23/295 (7%)
Query: 1 MLHRGMQPTAPSRHVHWYLQLLWKDSPLRYTVPPKMQGAPSLAGEEEGKRGVGDAEVRHW 60
MLHRGMQPTAPSRHVHWYLQLLWKDSPLRYTVPPKMQGAPSLAGEEEGKRGVGDAEVRHW
Sbjct: 199 MLHRGMQPTAPSRHVHWYLQLLWKDSPLRYTVPPKMQGAPSLAGEEEGKRGVGDAEVRHW 258
Query: 61 GTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGA 120
GTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGA
Sbjct: 259 GTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGA 318
Query: 121 HADLAVGRGAEVTEEALVRVAGVALGAQLAQLLGADAAAAAAVQHEAHARRTARRWLVRA 180
HADLA LAQLLGADAAAAAAVQHEAHARR ARR LVRA
Sbjct: 319 HADLA-----------------------LAQLLGADAAAAAAVQHEAHARRAARRRLVRA 355
Query: 181 PARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHE 240
PARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHE
Sbjct: 356 PARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHE 415
Query: 241 GDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGGISYIFLSFPWPKMIK 295
GDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGGISYIFLSFPWPKMIK
Sbjct: 416 GDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGGISYIFLSFPWPKMIK 470
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 47.0 bits (110), Expect = 2e-05
Identities = 64/205 (31%), Positives = 78/205 (38%), Gaps = 21/205 (10%)
Query: 77 AGGGLAAAGERNSVRAV----SFSSGRVGVREEAAGHLAVGAAGLTGAHADL---AVGRG 129
AGG L++ +V SFS+ G E HL +TG L A+G
Sbjct: 51 AGGSLSSTPMSTPCSSVPPSPSFSAPSPGSGSEQKAHLE-DYYWMTGYPQQLNPEALGFS 109
Query: 130 AEVTEEALVRVAGVALGAQLAQLLGADAAAAAAVQHEAHARRTARRWLVRAPARPAAVLA 189
E EAL+ + G GA AAAA + + + A A +AV+A
Sbjct: 110 PEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIA 169
Query: 190 DGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADG---A 246
Q G G HA G P AGAPGA +A G A G A
Sbjct: 170 AAAAQSGAGPHYHHHHHHAA-GHHHHP------TAGAPGAAGSAAASAGGAGGAGGGGPA 222
Query: 247 HTGGGHGWHCGRSGGRGGGERGAAG 271
GGG G G GG GGG GA G
Sbjct: 223 SAGGGGG---GGGGGGGGGAAGAGG 244
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 47.0 bits (110), Expect = 2e-05
Identities = 64/205 (31%), Positives = 78/205 (38%), Gaps = 21/205 (10%)
Query: 77 AGGGLAAAGERNSVRAV----SFSSGRVGVREEAAGHLAVGAAGLTGAHADL---AVGRG 129
AGG L++ +V SFS+ G E HL +TG L A+G
Sbjct: 51 AGGSLSSTPMSTPCSSVPPSPSFSAPSPGSGSEQKAHLE-DYYWMTGYPQQLNPEALGFS 109
Query: 130 AEVTEEALVRVAGVALGAQLAQLLGADAAAAAAVQHEAHARRTARRWLVRAPARPAAVLA 189
E EAL+ + G GA AAAA + + + A A +AV+A
Sbjct: 110 PEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIA 169
Query: 190 DGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADG---A 246
Q G G HA G P AGAPGA +A G A G A
Sbjct: 170 AAAAQSGAGPHYHHHHHHAA-GHHHHP------TAGAPGAAGSAAASAGGAGGAGGGGPA 222
Query: 247 HTGGGHGWHCGRSGGRGGGERGAAG 271
GGG G G GG GGG GA G
Sbjct: 223 SAGGGGG---GGGGGGGGGAAGAGG 244
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 46.6 bits (109), Expect = 3e-05
Identities = 68/249 (27%), Positives = 89/249 (35%), Gaps = 38/249 (15%)
Query: 44 GEEEGKRGVGDAEVRHWGTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVR 103
G + RG G + R WG + A G G AAAG S S G+ R
Sbjct: 562 GGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSR---SGDGGKKAWR 618
Query: 104 EEAAGHLAVGAAG-LTGAHADLAVGRGAEVTEEALVRVAGVALGAQLAQLLGADAAAAAA 162
++AAG A D A A T G Q G++++AAAA
Sbjct: 619 QKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAA 678
Query: 163 VQHEAHARRTARRWLVRAPARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPA 222
V EA AR+ RR RA +R G GGQ +VG + R + P +
Sbjct: 679 VGQEAEARKKPRRR--RAKSR------------GDGGQNAAVGINPWQRRGKKP--RLGK 722
Query: 223 AAGAPGAYPAAEGEEDHEGD------------ADGAHTGGGHGWHCGRSGGRGGGERGAA 270
+ G GA G G A +H GG G RGGG + +
Sbjct: 723 SRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGG------GAKRRRGGGAKSRS 776
Query: 271 GPGALAVVG 279
G A+ G
Sbjct: 777 GEKAVTAGG 785
Score = 37.4 bits (85), Expect = 0.016
Identities = 71/255 (27%), Positives = 90/255 (35%), Gaps = 34/255 (13%)
Query: 50 RGVGDAEVRHWGTLTSRASGMRVGIWAAGGGLAAAGE----RNSVRAVSFSSGRVGVREE 105
RG GD ++R G + A R G AG AA G S+ + GR G +
Sbjct: 267 RGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPR 326
Query: 106 AAGHLAVGAA------GLTGAHADLAVGRGAEVTEEALVRVAGVALGAQLAQLLGADAAA 159
G A AA G G VG V R G Q A GA +
Sbjct: 327 RRGQKATKAAAAGTKRGGGGQQKAAVVG----VKSRKKQRRRGKKPRRQKASAAGAKSRG 382
Query: 160 AAAVQ--HEAHARRTAR---RWLVRAPARPAAVLADGRLQGGQGGQRRSVG---AHALPG 211
+ EA R R RW + P R A + +GG + R G A + G
Sbjct: 383 GGDKKGLREAKRRGDGRKKPRW--QNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGG 440
Query: 212 RPRVPPWQPPAAAGAPGAYPAAEGEEDHEGD-------ADGAHT---GGGHGWHCGRSGG 261
+ R + P G AAE + GD A A T GGG H G++
Sbjct: 441 KSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSRGGGLKSHSGKNLW 500
Query: 262 RGGGERGAAGPGALA 276
R G + AAG A A
Sbjct: 501 RRGQKAEAAGEKATA 515
Score = 35.8 bits (81), Expect = 0.046
Identities = 68/281 (24%), Positives = 96/281 (34%), Gaps = 56/281 (19%)
Query: 38 GAPSLAGEEEGKRGVGDAEVRHWGTLTSRASGMRVGIWAAGGGLAAAGE----------- 86
GA S +++G++ A + G SG +W G AAGE
Sbjct: 465 GAESRGDKKQGRQKASAAGTKSRGGGLKSHSGKN--LWRRGQKAEAAGEKATAAGAKSRG 522
Query: 87 ----RNSVRAVSFSSGRVGVREEAAGHLAVGAAGLT----GAHADLAVGRGAEVTEEALV 138
R AV+ + RVG + AV AAG T G + G G + +
Sbjct: 523 RKQPRRQKPAVAGAKSRVGGSKSRQRQKAV-AAGATSHGGGGNKQSRGGGGNKPRQWGQT 581
Query: 139 RVAGVALGAQLAQLLGADAAAAAAVQHEAHARRTARRWLVRAPARPAAVLADGRLQGGQG 198
A G Q AAA + A R + A A R + +
Sbjct: 582 AAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWR------QKAAGTGAKSRKKPWRR 635
Query: 199 GQRRSV--------GAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEE------------D 238
GQ+ + GA + + P WQ PAAAG+ + AA G+E
Sbjct: 636 GQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAK 695
Query: 239 HEGDADGAHTGGGHGW-------HCGRSGGRGGGE-RGAAG 271
GD G + W G+S G GG + RG+ G
Sbjct: 696 SRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGG 736
Score = 33.1 bits (74), Expect = 0.30
Identities = 51/181 (28%), Positives = 66/181 (36%), Gaps = 48/181 (26%)
Query: 128 RGAEVTEEALVRVA-GVALGAQLAQL---LGADAAA------AAAVQHEAHARRTARRWL 177
RG +A R G LGA LA+ L A++AA AA V+ + RR
Sbjct: 4 RGHRQCNQAAGRAGPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQK 63
Query: 178 VRAPARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEE 237
A + A RL+G +G A+ G+ WQ AAGA GA GE+
Sbjct: 64 AAAGGKKA------RLRGQKG---------AVAGKEARQHWQK--AAGAGGAENRGGGEQ 106
Query: 238 DHEGDADGAHTGGGHG-------------------WHCGRSGGRGGGERGAAGPGALAVV 278
+ A G + GG G W +S G RGA A A
Sbjct: 107 --KAAAAGTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAA 164
Query: 279 G 279
G
Sbjct: 165 G 165
Score = 28.5 bits (62), Expect = 7.4
Identities = 52/202 (25%), Positives = 76/202 (37%), Gaps = 24/202 (11%)
Query: 91 RAVSFSSGRVGVREEAAGHLA---VGAAGLTGAHADLAVGRGAEV--TEEALVRVAGVAL 145
R + ++GR G LA V A + A A A G ++ + + +R A
Sbjct: 7 RQCNQAAGRAGPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAA 66
Query: 146 GAQLAQLLGADAAAAAAVQHEAHARRTARRWLV--RAPARPAAVLADGRLQGGQGGQRRS 203
G + A+L G A A + H ++ A R A A + GG+G + R
Sbjct: 67 GGKKARLRGQKGAVAGKEARQ-HWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRR 125
Query: 204 VGAHALPGRPRVPPW--QPPAAAGA----PGAYPAAE--------GEEDHEGDADGAHTG 249
G A + P W Q AAAG+ GA AA GE+ + A GA +
Sbjct: 126 RGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSR 185
Query: 250 GGHGWHCGRSGGRGGGERGAAG 271
G R G + G+ G
Sbjct: 186 SGK--KPRRRGAKSRGDEDKKG 205
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 44.3 bits (103), Expect = 1e-04
Identities = 61/212 (28%), Positives = 77/212 (36%), Gaps = 35/212 (16%)
Query: 27 PLRYTVPPKMQGAPSLAGEEEGKRGVG--------DAEVRHWGTLTSRASGMRVGIWAAG 78
P+ VP ++ A +++G + G+G A+V G + + V A G
Sbjct: 771 PVHGHVPVELTAAAAVSGRGRLRDGLGRVASVAAEGAQVAWAGAVLVQGHEAGVAGGARG 830
Query: 79 GGLAAAG-------ERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGAHADLAVGRGAE 131
GG AA G +R R V RVG R AA AG G G GA
Sbjct: 831 GGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAA 890
Query: 132 VTEEALVR---------VAGVALGAQLAQLLGADAAAAAAVQHE----AHARRTARRWLV 178
V + A R A A G + AQ A A H A RR+ RR V
Sbjct: 891 VLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRPGARGRRSRRRAAV 950
Query: 179 --RAPARPAAVLADGRLQGGQGGQRRSVGAHA 208
A PA R GGQ +VGA A
Sbjct: 951 ALAGGAHPARAALGRRRGGGQ-----AVGARA 977
Score = 28.1 bits (61), Expect = 9.6
Identities = 55/212 (25%), Positives = 66/212 (31%), Gaps = 45/212 (21%)
Query: 106 AAGHLAVGAAGLTGAHADLAVGRGAEVTEEALVRVAGVALGAQLAQLLGADAAAAAAVQH 165
A GH+ V A + GR V AG +GA L + V H
Sbjct: 639 AHGHVVVAPAAAAPTAREGRAGRHGHVAVVCPQVAAGAPVGADLDVSV---VLWVGVVGH 695
Query: 166 EAHARRTARRWLVRAPARPAAVLADGRLQGGQGG---------QRRSVGAHALPGRP--- 213
R R RA AR +Q G+GG + + VG A P
Sbjct: 696 LGRGRGAGRAEAARA-AREGGPHQGVFIQRGRGGLGHRPLPGWRGQGVGPLAQPSVQVLG 754
Query: 214 RVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGGH--------------------- 252
RVP + PA A A G E A A +G G
Sbjct: 755 RVP--RDPAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLRDGLGRVASVAAEGAQVAWA 812
Query: 253 ------GWHCGRSGGRGGGERGAAGPGALAVV 278
G G +GG GG A GP A AVV
Sbjct: 813 GAVLVQGHEAGVAGGARGGGAAAGGPLAGAVV 844
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 44.3 bits (103), Expect = 1e-04
Identities = 61/212 (28%), Positives = 77/212 (36%), Gaps = 35/212 (16%)
Query: 27 PLRYTVPPKMQGAPSLAGEEEGKRGVG--------DAEVRHWGTLTSRASGMRVGIWAAG 78
P+ VP ++ A +++G + G+G A+V G + + V A G
Sbjct: 771 PVHGHVPVELTAAAAVSGRGRLRDGLGRVASVAAEGAQVAWAGAVLVQGHEAGVAGGARG 830
Query: 79 GGLAAAG-------ERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGAHADLAVGRGAE 131
GG AA G +R R V RVG R AA AG G G GA
Sbjct: 831 GGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAA 890
Query: 132 VTEEALVR---------VAGVALGAQLAQLLGADAAAAAAVQHE----AHARRTARRWLV 178
V + A R A A G + AQ A A H A RR+ RR V
Sbjct: 891 VLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRPGARGRRSRRRAAV 950
Query: 179 --RAPARPAAVLADGRLQGGQGGQRRSVGAHA 208
A PA R GGQ +VGA A
Sbjct: 951 ALAGGAHPARAALGRRRGGGQ-----AVGARA 977
Score = 28.1 bits (61), Expect = 9.6
Identities = 55/212 (25%), Positives = 66/212 (31%), Gaps = 45/212 (21%)
Query: 106 AAGHLAVGAAGLTGAHADLAVGRGAEVTEEALVRVAGVALGAQLAQLLGADAAAAAAVQH 165
A GH+ V A + GR V AG +GA L + V H
Sbjct: 639 AHGHVVVAPAAAAPTAREGRAGRHGHVAVVCPQVAAGAPVGADLDVSV---VLWVGVVGH 695
Query: 166 EAHARRTARRWLVRAPARPAAVLADGRLQGGQGG---------QRRSVGAHALPGRP--- 213
R R RA AR +Q G+GG + + VG A P
Sbjct: 696 LGRGRGAGRAEAARA-AREGGPHQGVFIQRGRGGLGHRPLPGWRGQGVGPLAQPSVQVLG 754
Query: 214 RVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGGH--------------------- 252
RVP + PA A A G E A A +G G
Sbjct: 755 RVP--RDPAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLRDGLGRVASVAAEGAQVAWA 812
Query: 253 ------GWHCGRSGGRGGGERGAAGPGALAVV 278
G G +GG GG A GP A AVV
Sbjct: 813 GAVLVQGHEAGVAGGARGGGAAAGGPLAGAVV 844
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/60 (41%), Positives = 30/60 (50%)
Query: 224 AGAPGAYPAAEGEEDHEGDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGGISY 283
AGA GA AA G H+G G GGG G G GG GGG G G ++GG ++
Sbjct: 129 AGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLGGSAH 188
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 43.5 bits (101), Expect = 2e-04
Identities = 32/100 (32%), Positives = 36/100 (36%), Gaps = 20/100 (20%)
Query: 192 RLQGGQGGQRRSVGAHALPGRPRVPPWQ----------PPAAAGAPGA-YPAAEGEEDHE 240
R +GG+GG P PP++ PP G PG G HE
Sbjct: 705 RGRGGRGGNEPP---------PPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHE 755
Query: 241 GDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGG 280
G G GH H G GG G G R GPG GG
Sbjct: 756 GPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGG 795
Score = 39.7 bits (91), Expect = 0.003
Identities = 30/84 (35%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 194 QGGQGGQRRSVG--AHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGG 251
+G GG S G H PG +P G G+ G HEG G G G
Sbjct: 755 EGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPG--GSMGGGGGHRPHEGPGGGISGGSG 812
Query: 252 HGWHCGRSG--GRGGGERGAAGPG 273
H H G G G GGG R GPG
Sbjct: 813 HRPHEGPGGGMGAGGGHRPHEGPG 836
Score = 39.3 bits (90), Expect = 0.004
Identities = 28/80 (35%), Positives = 28/80 (35%), Gaps = 15/80 (18%)
Query: 196 GQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGGHGWH 255
G GG G H RP G G G HEG G GGGH H
Sbjct: 786 GPGGSMGGGGGH----RPH---------EGPGGGISGGSGHRPHEGPGGGMGAGGGHRPH 832
Query: 256 CGRSGGRG--GGERGAAGPG 273
G G G GG R GPG
Sbjct: 833 EGPGGSMGGSGGHRPHEGPG 852
Score = 31.2 bits (69), Expect = 1.1
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 191 GRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGG 250
G GG GG R H PG +P G G +H G H GG
Sbjct: 836 GGSMGGSGGHR----PHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGG 891
Query: 251 GHGWHCGRSGGRGGGE 266
GH H G G GG+
Sbjct: 892 GHRGHDG--GHSHGGD 905
Score = 30.4 bits (67), Expect = 1.9
Identities = 33/107 (30%), Positives = 39/107 (36%), Gaps = 13/107 (12%)
Query: 188 LADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAY----PAAEGEEDHEGDA 243
+A+G GG GG + PG P P P P P G+ +G
Sbjct: 625 IANGFPPGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPG 684
Query: 244 DGAHTG---GGHG-----WHCGRSGGRGGGERGAAGPGALAVVGGIS 282
D G GG G +H GR GGRGG E P GG S
Sbjct: 685 DPMRGGPMRGGPGPGPGPYHRGR-GGRGGNEPPPPPPPFRGARGGRS 730
Score = 30.0 bits (66), Expect = 2.5
Identities = 31/103 (30%), Positives = 33/103 (32%), Gaps = 15/103 (14%)
Query: 191 GRLQGGQGGQRRSVGAHAL----PGRPRVPPWQPPA---------AAGAPGAYPAAEGEE 237
G + G GG VG L P R P W P PG P G
Sbjct: 649 GPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRG 708
Query: 238 DHEGDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGG 280
G+ G GRSG GG G GPG V GG
Sbjct: 709 GRGGNEPPPPPPPFRGARGGRSG--GGPPNGRGGPGGGMVGGG 749
Score = 30.0 bits (66), Expect = 2.5
Identities = 26/84 (30%), Positives = 28/84 (33%), Gaps = 6/84 (7%)
Query: 191 GRLQGGQGGQRRSVG-AHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTG 249
G GG GG R G + G P + P G A G HEG
Sbjct: 788 GGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPG-----GGMGAGGGHRPHEGPGGSMGGS 842
Query: 250 GGHGWHCGRSGGRGGGERGAAGPG 273
GGH H G G G R PG
Sbjct: 843 GGHRPHEGPGHGGPHGHRPHDVPG 866
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 42.0 bits (97), Expect = 6e-04
Identities = 41/132 (31%), Positives = 49/132 (37%), Gaps = 10/132 (7%)
Query: 149 LAQLLGADAAAAAAVQHEAHARRTARRWLV----RAPARPAAVLADGRLQGGQGGQRRSV 204
LA+ LG A A V A T R + A AR A R +G G R +
Sbjct: 350 LAEGLGVSPQAGARVGEAREAVTTHERAHLDREGEARARLGQAAAQMRREGW--GARAKL 407
Query: 205 GAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDA---DGAHTGG-GHGWHCGRSG 260
G + G+ PW PA PGA A+ G A G+ G G GW G
Sbjct: 408 GGRGVCGKCGPGPWDDPARRRNPGAAARAKLAGQRAGRARARTGSQVGSRGRGWGPGAGR 467
Query: 261 GRGGGERGAAGP 272
GG RG P
Sbjct: 468 VPSGGRRGVGNP 479
Score = 34.3 bits (77), Expect = 0.13
Identities = 70/235 (29%), Positives = 85/235 (36%), Gaps = 31/235 (13%)
Query: 68 SGMRVGIWAAGGGLAAAGERNS-VRAVSFSSGRVGVREEAA---GHLAVGAA-GLTGAHA 122
+G R G G LA A E+ + V A VG+ A GH+AV A L A
Sbjct: 187 AGGRHGAGQLEGALAVAAEQVAEVEAAGGQHRPVGLEGLALDHDGHIAVEAQQALLVQAA 246
Query: 123 DLAVGRGAEVTEEALV---RVA---GVALGAQLAQLLGADAAAAAAVQH-EAHARRTARR 175
V ++ + L R A G GA LA L+ +AAAAA +H A R
Sbjct: 247 QHCVPEVGDLDVQHLRHGGRAAAGLGSQRGAALAGLIYLPSAAAAAGRHCPLRLAGQAPR 306
Query: 176 WLVRAPARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPP-------WQPPAAAGAPG 228
PA P + GG+G R H RP P P A A
Sbjct: 307 TQPACPAAPRMQQTEREPWGGEGAGSRFKRLHDESPRPNFPQSLAEGLGVSPQAGARVGE 366
Query: 229 AYPAAEGEE----DHEGDA-----DGAHTGGGHGWHC-GRSGGRGGGERGAAGPG 273
A A E D EG+A A GW + GGR G G GPG
Sbjct: 367 AREAVTTHERAHLDREGEARARLGQAAAQMRREGWGARAKLGGR--GVCGKCGPG 419
Score = 31.2 bits (69), Expect = 1.1
Identities = 76/271 (28%), Positives = 97/271 (35%), Gaps = 54/271 (19%)
Query: 43 AGEEEGKRG---VGDAEV-------RHWGTLTSRASGMRVGIWAAGGGLAAAGERNSVRA 92
AG+E G+ G VGD RH R + + A GG A AG R
Sbjct: 29 AGDEGGQAGHPVVGDTGQFERGCARRHRSPRGHRHAVPGPRLQRALGGQAWAGRRQLHGF 88
Query: 93 VSFSSGRVGVREEAAGHLAVGAAGLTGAHADL---AVGRGAEVTEEALVRVA-GVA---- 144
+ +S + R+ G VG G G L A+G GA V + + +RVA G A
Sbjct: 89 MLYSGQQ---RDGHRGGHDVGGRG-GGGRLQLVAGALGLGAGVLDHSGLRVAVGRAHLEH 144
Query: 145 -LGAQLAQLLGADAAAAA------AVQHEAHARRTARRWLVRAPARPAAVLADGRLQ--- 194
+GA L +L A A +H AR + L+ A R A +G L
Sbjct: 145 EVGAALHDVLDLQEAGRVHDHELLAGRHGEPARVAEGQDLLEAGGRHGAGQLEGALAVAA 204
Query: 195 ------GGQGGQRRSVGAHALP----GRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDAD 244
GGQ R VG L G V Q A P GD D
Sbjct: 205 EQVAEVEAAGGQHRPVGLEGLALDHDGHIAVEAQQALLVQAAQHCVPEV-------GDLD 257
Query: 245 GAHTGGGHGWHCGRSGGRGGGERGAAGPGAL 275
H H GR+ G +RGAA G +
Sbjct: 258 VQHLR-----HGGRAAAGLGSQRGAALAGLI 283
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 42.0 bits (97), Expect = 6e-04
Identities = 41/132 (31%), Positives = 49/132 (37%), Gaps = 10/132 (7%)
Query: 149 LAQLLGADAAAAAAVQHEAHARRTARRWLV----RAPARPAAVLADGRLQGGQGGQRRSV 204
LA+ LG A A V A T R + A AR A R +G G R +
Sbjct: 350 LAEGLGVSPQAGARVGEAREAVTTHERAHLDREGEARARLGQAAAQMRREGW--GARAKL 407
Query: 205 GAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDA---DGAHTGG-GHGWHCGRSG 260
G + G+ PW PA PGA A+ G A G+ G G GW G
Sbjct: 408 GGRGVCGKCGPGPWDDPARRRNPGAAARAKLAGQRAGRARARTGSQVGSRGRGWGPGAGR 467
Query: 261 GRGGGERGAAGP 272
GG RG P
Sbjct: 468 VPSGGRRGVGNP 479
Score = 34.3 bits (77), Expect = 0.13
Identities = 70/235 (29%), Positives = 85/235 (36%), Gaps = 31/235 (13%)
Query: 68 SGMRVGIWAAGGGLAAAGERNS-VRAVSFSSGRVGVREEAA---GHLAVGAA-GLTGAHA 122
+G R G G LA A E+ + V A VG+ A GH+AV A L A
Sbjct: 187 AGGRHGAGQLEGALAVAAEQVAEVEAAGGQHRPVGLEGLALDHDGHIAVEAQQALLVQAA 246
Query: 123 DLAVGRGAEVTEEALV---RVA---GVALGAQLAQLLGADAAAAAAVQH-EAHARRTARR 175
V ++ + L R A G GA LA L+ +AAAAA +H A R
Sbjct: 247 QHCVPEVGDLDVQHLRHGGRAAAGLGSQRGAALAGLIYLPSAAAAAGRHCPLRLAGQAPR 306
Query: 176 WLVRAPARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPP-------WQPPAAAGAPG 228
PA P + GG+G R H RP P P A A
Sbjct: 307 TQPACPAAPRMQQTEREPWGGEGAGSRFKRLHDESPRPNFPQSLAEGLGVSPQAGARVGE 366
Query: 229 AYPAAEGEE----DHEGDA-----DGAHTGGGHGWHC-GRSGGRGGGERGAAGPG 273
A A E D EG+A A GW + GGR G G GPG
Sbjct: 367 AREAVTTHERAHLDREGEARARLGQAAAQMRREGWGARAKLGGR--GVCGKCGPG 419
Score = 31.2 bits (69), Expect = 1.1
Identities = 76/271 (28%), Positives = 97/271 (35%), Gaps = 54/271 (19%)
Query: 43 AGEEEGKRG---VGDAEV-------RHWGTLTSRASGMRVGIWAAGGGLAAAGERNSVRA 92
AG+E G+ G VGD RH R + + A GG A AG R
Sbjct: 29 AGDEGGQAGHPVVGDTGQFERGCARRHRSPRGHRHAVPGPRLQRALGGQAWAGRRQLHGF 88
Query: 93 VSFSSGRVGVREEAAGHLAVGAAGLTGAHADL---AVGRGAEVTEEALVRVA-GVA---- 144
+ +S + R+ G VG G G L A+G GA V + + +RVA G A
Sbjct: 89 MLYSGQQ---RDGHRGGHDVGGRG-GGGRLQLVAGALGLGAGVLDHSGLRVAVGRAHLEH 144
Query: 145 -LGAQLAQLLGADAAAAA------AVQHEAHARRTARRWLVRAPARPAAVLADGRLQ--- 194
+GA L +L A A +H AR + L+ A R A +G L
Sbjct: 145 EVGAALHDVLDLQEAGRVHDHELLAGRHGEPARVAEGQDLLEAGGRHGAGQLEGALAVAA 204
Query: 195 ------GGQGGQRRSVGAHALP----GRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDAD 244
GGQ R VG L G V Q A P GD D
Sbjct: 205 EQVAEVEAAGGQHRPVGLEGLALDHDGHIAVEAQQALLVQAAQHCVPEV-------GDLD 257
Query: 245 GAHTGGGHGWHCGRSGGRGGGERGAAGPGAL 275
H H GR+ G +RGAA G +
Sbjct: 258 VQHLR-----HGGRAAAGLGSQRGAALAGLI 283
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 42.0 bits (97), Expect = 6e-04
Identities = 53/210 (25%), Positives = 73/210 (34%), Gaps = 23/210 (10%)
Query: 78 GGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGAHADLAVGRGAEVTEEAL 137
GGG + G + + S+G G R +L G G +D VG AL
Sbjct: 85 GGGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGGGGGGSSD-GVGAPPHSAAAAL 143
Query: 138 VRVAGVALGAQLAQLLGADAAAAAAVQHEAHARRTARRWLVRAPARPAAVLADGRLQGGQ 197
A G + A AAAAAAV H+ H + ++P A G
Sbjct: 144 PPPA-YGFGQPYGRSPSAVAAAAAAVFHQQHGGQ-------QSPGLAALQSGGGGGLEPY 195
Query: 198 GGQRRSVGAHALPGR------PRVPPWQPPAAA--------GAPGAYPAAEGEEDHEGDA 243
G +++ H P P + PPA A G PG+ AA +
Sbjct: 196 AGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSS 255
Query: 244 DGAHTGGGHGWHCGRSGGRGGGERGAAGPG 273
+ + + R G GGG AAG G
Sbjct: 256 SASASSSSSSFAQQRFGAMGGGGPSAAGGG 285
Score = 29.6 bits (65), Expect = 3.3
Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 222 AAAGAPGAYPAAEGEEDHEGDADGAHTGGGHGWHCG---RSGGRGGGERGAAGPGA 274
AAA G AA G+E EG A G G G GG GGG GPGA
Sbjct: 42 AAAAERGEMKAAAGQES-EGPAVGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGA 96
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 42.0 bits (97), Expect = 6e-04
Identities = 53/210 (25%), Positives = 73/210 (34%), Gaps = 23/210 (10%)
Query: 78 GGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTGAHADLAVGRGAEVTEEAL 137
GGG + G + + S+G G R +L G G +D VG AL
Sbjct: 85 GGGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGGGGGGSSD-GVGAPPHSAAAAL 143
Query: 138 VRVAGVALGAQLAQLLGADAAAAAAVQHEAHARRTARRWLVRAPARPAAVLADGRLQGGQ 197
A G + A AAAAAAV H+ H + ++P A G
Sbjct: 144 PPPA-YGFGQPYGRSPSAVAAAAAAVFHQQHGGQ-------QSPGLAALQSGGGGGLEPY 195
Query: 198 GGQRRSVGAHALPGR------PRVPPWQPPAAA--------GAPGAYPAAEGEEDHEGDA 243
G +++ H P P + PPA A G PG+ AA +
Sbjct: 196 AGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSS 255
Query: 244 DGAHTGGGHGWHCGRSGGRGGGERGAAGPG 273
+ + + R G GGG AAG G
Sbjct: 256 SASASSSSSSFAQQRFGAMGGGGPSAAGGG 285
Score = 29.6 bits (65), Expect = 3.3
Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 222 AAAGAPGAYPAAEGEEDHEGDADGAHTGGGHGWHCG---RSGGRGGGERGAAGPGA 274
AAA G AA G+E EG A G G G GG GGG GPGA
Sbjct: 42 AAAAERGEMKAAAGQES-EGPAVGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGA 96
>gi|113419362 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 40.8 bits (94), Expect = 0.001
Identities = 33/93 (35%), Positives = 35/93 (37%), Gaps = 9/93 (9%)
Query: 187 VLADGRLQGGQG---GQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDA 243
VL L GG G G GAH P RP P +PG A G GD
Sbjct: 33 VLCAAALSGGPGRAAGSAIGRGAHLSPSRPPAAPPPRREVLSSPGCCAALAG-----GDT 87
Query: 244 DGAHTGGGHGWH-CGRSGGRGGGERGAAGPGAL 275
+G G W C S G G G R A PG L
Sbjct: 88 NGEWILRGSTWGLCPPSPGCGAGRRALATPGPL 120
>gi|113418886 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 40.8 bits (94), Expect = 0.001
Identities = 33/93 (35%), Positives = 35/93 (37%), Gaps = 9/93 (9%)
Query: 187 VLADGRLQGGQG---GQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDA 243
VL L GG G G GAH P RP P +PG A G GD
Sbjct: 33 VLCAAALSGGPGRAAGSAIGRGAHLSPSRPPAAPPPRREVLSSPGCCAALAG-----GDT 87
Query: 244 DGAHTGGGHGWH-CGRSGGRGGGERGAAGPGAL 275
+G G W C S G G G R A PG L
Sbjct: 88 NGEWILRGSTWGLCPPSPGCGAGRRALATPGPL 120
>gi|113419893 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 40.8 bits (94), Expect = 0.001
Identities = 33/93 (35%), Positives = 35/93 (37%), Gaps = 9/93 (9%)
Query: 187 VLADGRLQGGQG---GQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDA 243
VL L GG G G GAH P RP P +PG A G GD
Sbjct: 33 VLCAAALSGGPGRAAGSAIGRGAHLSPSRPPAAPPPRREVLSSPGCCAALAG-----GDT 87
Query: 244 DGAHTGGGHGWH-CGRSGGRGGGERGAAGPGAL 275
+G G W C S G G G R A PG L
Sbjct: 88 NGEWILRGSTWGLCPPSPGCGAGRRALATPGPL 120
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 40.0 bits (92), Expect = 0.002
Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 5/86 (5%)
Query: 195 GGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGGHGW 254
GG+GG S G + G G+ G Y G G + G +G G G
Sbjct: 476 GGRGGSGGSYGRGSRGGSGG-----SYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGS 530
Query: 255 HCGRSGGRGGGERGAAGPGALAVVGG 280
G GG GGG G +G G GG
Sbjct: 531 GGGYGGGSGGGHSGGSGGGHSGGSGG 556
Score = 37.7 bits (86), Expect = 0.012
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 225 GAPGAYPAAEGEED-----HEGDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVG 279
G+ G+Y G + G + G H+GG G H G SGG GG G+ G G
Sbjct: 515 GSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGG 574
Query: 280 G 280
G
Sbjct: 575 G 575
Score = 36.2 bits (82), Expect = 0.035
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 223 AAGAPGAYPAAEGEEDHEGDADGAHTGGGHGWHCGRSGGRGGGERGAAGPG 273
+ G+ G + G G G +GGG+G G GG GG G +G G
Sbjct: 543 SGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFG 593
Score = 35.4 bits (80), Expect = 0.060
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 222 AAAGAPGAYPAAEGEEDHEGDADGAHTGGG---HGWHCGRSGGRGGGERGAAG 271
+ G+ G Y G H G + G H+GG +G G GG GGG G +G
Sbjct: 526 SGGGSGGGYGGGSGG-GHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSG 577
Score = 31.6 bits (70), Expect = 0.87
Identities = 26/79 (32%), Positives = 30/79 (37%), Gaps = 18/79 (22%)
Query: 193 LQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGGH 252
L GG GG R G A+G G Y ++ G G G GGG+
Sbjct: 86 LGGGFGGGSRGFGG----------------ASG--GGYSSSGGFGGGFGGGSGGGFGGGY 127
Query: 253 GWHCGRSGGRGGGERGAAG 271
G G GG GGG G G
Sbjct: 128 GSGFGGFGGFGGGAGGGDG 146
Score = 29.6 bits (65), Expect = 3.3
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 222 AAAGAPGAYPAAEGEEDHEGDADGAHTGGGHGWHCGRSGGRGGGERGAAGPG 273
+ G+ G Y G G + G+H GGG G+ G GGGE + G
Sbjct: 564 SGGGSGGGYGGGSGSR---GGSGGSH-GGGSGFGGESGGSYGGGEEASGSGG 611
Score = 29.3 bits (64), Expect = 4.3
Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 195 GGQGGQRRSV------GAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADG--A 246
GG GG R S G+ + GR + G+ G + A+ G + G
Sbjct: 40 GGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGG 99
Query: 247 HTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGG 280
+GGG+ G GG GGG G G G + GG
Sbjct: 100 ASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGG 133
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 39.7 bits (91), Expect = 0.003
Identities = 33/93 (35%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Query: 181 PARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHE 240
P P AV A G + G G R S G + G P P PA A P P A+G+
Sbjct: 343 PGFPGAVGAKG--EAGPQGPRGSEGPQGVRGEPGPPG---PAGAAGPAGNPGADGQP--- 394
Query: 241 GDADGAHTGGGHGWHCGRSGGRG-GGERGAAGP 272
A GA+ G G G RG G +G GP
Sbjct: 395 -GAKGANGAPGIAGAPGFPGARGPSGPQGPGGP 426
Score = 36.2 bits (82), Expect = 0.035
Identities = 31/88 (35%), Positives = 35/88 (39%), Gaps = 19/88 (21%)
Query: 196 GQGGQRRSVGAHALPGRPRVP----------PWQPPAAAGAPGAYPAAEGEEDHEGDADG 245
G+ G+ + GA PGR P P PP A GAPGA P G GD
Sbjct: 1010 GESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGA-PGPVGPAGKSGDR-- 1066
Query: 246 AHTGGGHGWHCGRSGGRGG-GERGAAGP 272
G G +G G G RG AGP
Sbjct: 1067 -----GETGPAGPAGPVGPVGARGPAGP 1089
Score = 35.4 bits (80), Expect = 0.060
Identities = 72/265 (27%), Positives = 79/265 (29%), Gaps = 49/265 (18%)
Query: 27 PLRYTVPPKMQGAPSLAGEEEGKRGVGDAEVRHWGTLTSRASGMRVGIWAAGGGLAAAGE 86
P + PP G P GE GDA G +G A G A G
Sbjct: 810 PAGFAGPPGADGQPGAKGEPGDAGAKGDAGPP--GPAGPAGPPGPIGNVGAPGAKGARGS 867
Query: 87 RNSVRAVSF--SSGRVGVREEAAGHLAVGAAGLTGAHADLA-------VGRGAEVTEEAL 137
A F ++GRVG + G G G GR EV
Sbjct: 868 AGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGP 927
Query: 138 VRVAGVALGAQLAQLLGADAAAAAAVQHEAHARRTARRWLVRAPARPAAV-LADGRLQGG 196
AG GAD A A P P +A R G
Sbjct: 928 PGPAGEKGSP------GADGPAGA-------------------PGTPGPQGIAGQRGVVG 962
Query: 197 QGGQRRSVGAHALPGRPRVPPWQPPAAA----GAPG-----AYPAAEGEEDHEGDADGAH 247
GQR G LPG P Q P+ A G PG GE EG A GA
Sbjct: 963 LPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREG-APGAE 1021
Query: 248 TGGGHGWHCGRSGGRGGGERGAAGP 272
G G G R GE G AGP
Sbjct: 1022 GSPGRDGSPGAKGDR--GETGPAGP 1044
Score = 34.7 bits (78), Expect = 0.10
Identities = 37/105 (35%), Positives = 42/105 (40%), Gaps = 18/105 (17%)
Query: 181 PARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVP-PWQPPAAAGAPGA--YPAAEGEE 237
P PA D + + G G GA PG P P P AG PGA P A+GE
Sbjct: 771 PPGPAGAPGD-KGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEP 829
Query: 238 DHEGDADGAHTGGGHGWHCGRSGGRG----------GGERGAAGP 272
GDA GA G G +G G G RG+AGP
Sbjct: 830 ---GDA-GAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGP 870
Score = 33.5 bits (75), Expect = 0.23
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 196 GQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGGHGWH 255
GQ G + + GA + G P P + P+ PG P +G G A G+ G
Sbjct: 392 GQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPG-APGSKGDTGAKGE 450
Query: 256 CGRSGGRG-------GGERGAAG-PGALAVVG 279
G G +G G+RGA G PG + G
Sbjct: 451 PGPVGVQGPPGPAGEEGKRGARGEPGPTGLPG 482
Score = 31.6 bits (70), Expect = 0.87
Identities = 30/90 (33%), Positives = 34/90 (37%), Gaps = 22/90 (24%)
Query: 196 GQGGQRRSVGAHALPGRPRV----PPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGG 251
G G GA PG+ V P PP AGAPG +GE G A
Sbjct: 743 GDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPG----DKGESGPSGPA-------- 790
Query: 252 HGWHCGRSGGRGG-GERGAAGPGALAVVGG 280
G +G RG G+RG GP A G
Sbjct: 791 -----GPTGARGAPGDRGEPGPPGPAGFAG 815
Score = 30.8 bits (68), Expect = 1.5
Identities = 32/100 (32%), Positives = 35/100 (35%), Gaps = 10/100 (10%)
Query: 179 RAPARPAAVLADGRLQGGQG-----GQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAA 233
R PA P D G QG G R G PG P P Q P+ A P
Sbjct: 1084 RGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGP 1143
Query: 234 EGEEDHEGDADGAHTGGGHGWHCGRSGGRG-GGERGAAGP 272
G G DG + G G G RG G+ G GP
Sbjct: 1144 PGSAGAPG-KDGLN---GLPGPIGPPGPRGRTGDAGPVGP 1179
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 39.7 bits (91), Expect = 0.003
Identities = 77/294 (26%), Positives = 101/294 (34%), Gaps = 50/294 (17%)
Query: 2 LHRGMQPTAPSRHVHWYLQLLWKDSPLRYTVPPKMQGAPSL--AGEEEGKRGVGDAEVRH 59
LH +PT P R +P R+ P+ PS G G+ G E +
Sbjct: 148 LHSPREPTPPGR----------LSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQA 197
Query: 60 WGTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTG 119
W +S A G +A+ S + REEAA G+ G G
Sbjct: 198 WEQRSSH-------FLAPEGSVASL--LPSAKPARAPRPAPRAREEAAA----GSRGRGG 244
Query: 120 AHADLAVGRGAEVTEEALVRVAGVALGAQLAQL---------------LGADAAAAAAVQ 164
A A G + L+ + V+L A LA+ L A A + A
Sbjct: 245 AERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLAGSRAPS 304
Query: 165 HEAHARRTARRWLVRAPARPAAVLADGRLQGGQ--GGQRRSVGAHALPGRPRVPPWQPPA 222
RR RR R+PA L +GG+ G +RR G RV +
Sbjct: 305 LSPFPRRCRRR-AERSPAGHGLPLPRSLSRGGEVVGARRRRGGEER-----RVRGRRQGC 358
Query: 223 AAGAPG--AYPAAEGEEDHEGDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGA 274
A G+P A PAA G A GG R G +G G RG P A
Sbjct: 359 ALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRA 412
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 39.7 bits (91), Expect = 0.003
Identities = 77/294 (26%), Positives = 101/294 (34%), Gaps = 50/294 (17%)
Query: 2 LHRGMQPTAPSRHVHWYLQLLWKDSPLRYTVPPKMQGAPSL--AGEEEGKRGVGDAEVRH 59
LH +PT P R +P R+ P+ PS G G+ G E +
Sbjct: 148 LHSPREPTPPGR----------LSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQA 197
Query: 60 WGTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVREEAAGHLAVGAAGLTG 119
W +S A G +A+ S + REEAA G+ G G
Sbjct: 198 WEQRSSH-------FLAPEGSVASL--LPSAKPARAPRPAPRAREEAAA----GSRGRGG 244
Query: 120 AHADLAVGRGAEVTEEALVRVAGVALGAQLAQL---------------LGADAAAAAAVQ 164
A A G + L+ + V+L A LA+ L A A + A
Sbjct: 245 AERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLAGSRAPS 304
Query: 165 HEAHARRTARRWLVRAPARPAAVLADGRLQGGQ--GGQRRSVGAHALPGRPRVPPWQPPA 222
RR RR R+PA L +GG+ G +RR G RV +
Sbjct: 305 LSPFPRRCRRR-AERSPAGHGLPLPRSLSRGGEVVGARRRRGGEER-----RVRGRRQGC 358
Query: 223 AAGAPG--AYPAAEGEEDHEGDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGA 274
A G+P A PAA G A GG R G +G G RG P A
Sbjct: 359 ALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRA 412
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 39.7 bits (91), Expect = 0.003
Identities = 33/83 (39%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 196 GQGGQRRSVGAHALPGRPRVP-PWQPPAAAGAPG--AYPAAEGEEDHEGDADGAHTGGGH 252
G GQ G LPGR P P PP +A A G +P A+G G A T G
Sbjct: 1263 GLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAP 1322
Query: 253 G--WHCGRSGGRGG-GERGAAGP 272
G G G RG GERG GP
Sbjct: 1323 GLKGSPGLPGPRGDPGERGPRGP 1345
Score = 37.7 bits (86), Expect = 0.012
Identities = 33/94 (35%), Positives = 39/94 (41%), Gaps = 19/94 (20%)
Query: 205 GAHALPGRPRVP----PWQPPAAAGAPG--AYPAAEGEEDHEGDADGAHTGGGHGWH--C 256
GA LPG+P P P PP A G G +P GE +G+ G G
Sbjct: 1453 GAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVA 1512
Query: 257 GRSGGRG----------GGERGAAG-PGALAVVG 279
GR G +G GE+G G PG AVVG
Sbjct: 1513 GRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVG 1546
Score = 33.5 bits (75), Expect = 0.23
Identities = 41/140 (29%), Positives = 49/140 (35%), Gaps = 26/140 (18%)
Query: 181 PARPAAVLADG----RLQGGQGGQRRSVGAHALPGRPRVP-PWQPPAAAGAPGAYPAAEG 235
P P V G R + GQ G G PGR +P P PP G+ G P A G
Sbjct: 2397 PGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGP-PGASG 2455
Query: 236 EEDHEGD-------------------ADGAHTGGGHGWHCGRSGGRG-GGERGAAGPGAL 275
+ +GD DG G G G RG GE+G G L
Sbjct: 2456 LKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGL 2515
Query: 276 AVVGGISYIFLSFPWPKMIK 295
G S + L P P+ K
Sbjct: 2516 KGDKGDSAVILGPPGPRGAK 2535
Score = 31.6 bits (70), Expect = 0.87
Identities = 36/120 (30%), Positives = 42/120 (35%), Gaps = 29/120 (24%)
Query: 189 ADGRLQG-GQGGQRRSVGAHALPGRPRVP----------PWQPPAAAGAPGAYPAAEGE- 236
ADGR G+ G + GA L G P +P P P GAPG EG
Sbjct: 1303 ADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPG 1362
Query: 237 -EDHEGDADGAHTGGGHGWHCGRSGGRGG---------------GERGAAGPGALAVVGG 280
+GD + G G G G RG GERG GPG + G
Sbjct: 1363 LPGRKGDPGPSGPPGPRG-PLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPG 1421
Score = 30.4 bits (67), Expect = 1.9
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 14/83 (16%)
Query: 196 GQGGQRRSVGAHALPGRPRVPPWQP--PAAAGAPG-----AYPAAEGEEDHEGDADGAHT 248
G+ G G LPG P PP P P G PG P GE+ +G+ +
Sbjct: 1806 GRDGLPGLRGEQGLPG-PSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGA 1864
Query: 249 GGGHGWHCGRSGGRGGGERGAAG 271
G GR G + GERGA G
Sbjct: 1865 SGRE----GRDGPK--GERGAPG 1881
Score = 29.3 bits (64), Expect = 4.3
Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
Query: 196 GQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGD--ADGAHTGG--G 251
G+ G G+ LPG P + P P +GE GD G G G
Sbjct: 1495 GERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKG 1554
Query: 252 HGWHCGRSGGRGG-GERGAAGPGALAVVG 279
G +G RG G +G GP L + G
Sbjct: 1555 EKGDVGPAGPRGATGVQGERGPPGLVLPG 1583
Score = 29.3 bits (64), Expect = 4.3
Identities = 30/99 (30%), Positives = 37/99 (37%), Gaps = 23/99 (23%)
Query: 196 GQGGQRRSVGAHALPGRPRVPPWQ----PPAAAGAPGAY-----------PAAEGEEDHE 240
GQ G R G LPG P + PP G PG P +G +
Sbjct: 1725 GQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLD 1784
Query: 241 GDADGAHTGGGHGWHCGRSG--GRGG-----GERGAAGP 272
G A G +G G++G GR G GE+G GP
Sbjct: 1785 GKPGAAGPSGPNG-AAGKAGDPGRDGLPGLRGEQGLPGP 1822
Score = 28.5 bits (62), Expect = 7.4
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 196 GQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGGHGWH 255
G+ GQ+ + G G P V P + G PG P +G+ G GA G
Sbjct: 2354 GEDGQKGAPGPKGFKGDPGV---GVPGSPGPPGP-PGVKGDLGLPG-LPGAPGVVGFPGQ 2408
Query: 256 CGRSGGRG----GGERGAAGP 272
G G G GERG AGP
Sbjct: 2409 TGPRGEMGQPGPSGERGLAGP 2429
>gi|5454064 RNA binding motif protein 14 [Homo sapiens]
Length = 669
Score = 39.7 bits (91), Expect = 0.003
Identities = 58/238 (24%), Positives = 86/238 (36%), Gaps = 28/238 (11%)
Query: 33 PPKMQGAPSLAGEEEGKRGVGDAEVRHWGTLTSRASGMRVGIWAAGGGLAAAGERNSVRA 92
P A S G G + A + G + +S G A G LA+ G + S
Sbjct: 292 PSSQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYG--AQGSSLASYGNQPSSYG 349
Query: 93 VSFSSGRVGVREEAAGHLAVGAAGLTGAHADLAVGRGAEVTEEALVRVAGVALGAQLAQL 152
+S GVR A+ + GAA G++ A GA+ +L A GAQ A
Sbjct: 350 AQAASS-YGVRAAASSYNTQGAASSLGSYGAQAASYGAQSAASSL------AYGAQAAS- 401
Query: 153 LGADAAAAAAVQHEAHARRTARRWLVRAPARPAAVLADGRLQGGQGGQRRSVGAHALPGR 212
A +A+ Q +A + A + ++PAA +A Q + A A
Sbjct: 402 YNAQPSASYNAQSAPYAAQQAASY----SSQPAAYVAQPATAAAYASQPAAYAAQA---- 453
Query: 213 PRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGGHGWHCGRSGGRGGGERGAA 270
AG+ GA P + + + G G +G +S G GAA
Sbjct: 454 -------TTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYG---AQSAAAATGSYGAA 501
>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
Length = 882
Score = 39.7 bits (91), Expect = 0.003
Identities = 26/57 (45%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 219 QPPAAAGAPGAYPAAEGE-EDHEGDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGA 274
+P A G PGA PAAEGE E+ +G A G G G S G G+ GAA P A
Sbjct: 117 EPEGATGLPGA-PAAEGEPEEEDGGAAGQRRDGRPG-----SSHNGSGDGGAAAPSA 167
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 39.7 bits (91), Expect = 0.003
Identities = 47/184 (25%), Positives = 62/184 (33%), Gaps = 13/184 (7%)
Query: 102 VREEAAGHLAVGAAGLTGAHADLAVGRGAEVTEEALVRVAGVALGAQLAQLLGAD-AAAA 160
V +AAG G G G G G A V +++ +D A
Sbjct: 22 VHSDAAGAGGGGGGGGGGGGGGAGGGGGGMQPGSAAVTSGAYRGDPSSVKMVQSDFMQGA 81
Query: 161 AAVQHEAHARRTARRWLVRAP--ARPAAVLADGRLQGGQGGQRRSVGAHALPGRPRVPPW 218
A + H A +W+ P A AA A ++ +VG + G P+ PP
Sbjct: 82 MAASNGGHMLSHAHQWVTALPHAAAAAAAAAAAAVEASSPWSGSAVG---MAGSPQQPPQ 138
Query: 219 QPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGGH------GWHCGRSGGRGGGERGAAGP 272
PP P A ++ H G A H G H H G GG G AA
Sbjct: 139 PPPPPPQGPDVKGGAGRDDLHAGTA-LHHRGPPHLGPPPPPPHQGHPGGWGAAAAAAAAA 197
Query: 273 GALA 276
A A
Sbjct: 198 AAAA 201
Score = 34.7 bits (78), Expect = 0.10
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 227 PGAYPAAEGEEDHEGDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGG 280
PG A G H +D A GGG G G GG GG G PG+ AV G
Sbjct: 11 PGNSLLAAGSIVH---SDAAGAGGGGGGGGGGGGGGAGGGGGGMQPGSAAVTSG 61
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 39.3 bits (90), Expect = 0.004
Identities = 26/55 (47%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 223 AAGAPGAYPAAEGEEDHEGDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAV 277
A PGA AE A G GGG G G GRGGGERG GP A AV
Sbjct: 153 ALDGPGAGGGAERGGSGRSSAGGGGGGGGGGGGRGSRRGRGGGERG--GPRAQAV 205
Score = 34.7 bits (78), Expect = 0.10
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 221 PAAAGAPGAYPAAEGEEDHEGDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGG 280
P A G GA G G G GGG G GR GG GG R A L+ + G
Sbjct: 157 PGAGG--GAERGGSGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRG 214
>gi|7710121 engrailed homeobox 2 [Homo sapiens]
Length = 333
Score = 39.3 bits (90), Expect = 0.004
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 190 DGRLQGGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTG 249
+G G +GG L R P PP A GA G PAA + +G+ G+ T
Sbjct: 103 EGGASGAEGGGGAGGSEQLLGSGSREPRQNPPCAPGAGGPLPAAGSDSPGDGEG-GSKTL 161
Query: 250 GGHGWHCGRSGGRGGGERGAAGPGALAVVG 279
HG G + GG+ G G+L G
Sbjct: 162 SLHG------GAKKGGDPGGPLDGSLKARG 185
Score = 30.0 bits (66), Expect = 2.5
Identities = 34/115 (29%), Positives = 40/115 (34%), Gaps = 22/115 (19%)
Query: 185 AAVLADGRLQ------GGQGGQRRSVGAHALPGRPRVPPWQPPAAAGAPGAYP------- 231
AA +G+ Q GG GG S A GR R PA APG +
Sbjct: 11 AAAAVEGQRQPESSPGGGSGGGGGSSPGEADTGRRRA--LMLPAVLQAPGNHQHPHRITN 68
Query: 232 -----AAEGEEDHEGDADG--AHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVG 279
E DA A GGG G G GG G E G G+ ++G
Sbjct: 69 FFIDNILRPEFGRRKDAGTCCAGAGGGRGGGAGGEGGASGAEGGGGAGGSEQLLG 123
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 39.3 bits (90), Expect = 0.004
Identities = 73/291 (25%), Positives = 95/291 (32%), Gaps = 61/291 (20%)
Query: 39 APSLAGEEEGKRGVGDAEVRHWGTLTSRASGMRVGIWAA--GGGLAAAGERNSVRAVSFS 96
A + AGE A +H G + G+ G+ + GGG G +
Sbjct: 15 AHAQAGELLSPGHARSAAAQHRGLVAPGRPGLVAGMASLLDGGGGGGGGGAGGAGGAGSA 74
Query: 97 SGRVGVREEAAG--HLAVGAA----GLTGAHADLAVGRGAEVTEEALVRVAGVALGAQLA 150
G R E AG H A+G A GL G + L + L +A VA
Sbjct: 75 GGGADFRGELAGPLHPAMGMACEAPGLGGTYTTLT-------PLQHLPPLAAVA-----D 122
Query: 151 QLLGADAAAAAAVQHEAHARRTARRWLVRAPARP-------------------AAVLADG 191
+ AAAA A H H P P AA+ + G
Sbjct: 123 KFHQHAAAAAVAGAHGGHPHAHPHPAAAPPPPPPPQRLAASVSGSFTLMRDERAALASVG 182
Query: 192 RLQGGQGGQRRSVGA-------------HALPGRPRVPPWQPPAAAGAPGAY-------P 231
L G G + ++G+ H P P PP P AA G PG P
Sbjct: 183 HLYGPYGKELPAMGSPLSPLPNALPPALHGAPQPPPPPPPPPLAAYGPPGHLAGDKLLPP 242
Query: 232 AAEGEEDHEGDADGAHTGGGHGWHCGRSGGRGGGERGAAGPGALAVVGGIS 282
AA E H A G G G GG + G LA +GG++
Sbjct: 243 AA--FEPHAALLGRAEDALARGLPGGGGGTGSGGAGSGSAAGLLAPLGGLA 291
>gi|239756804 PREDICTED: hypothetical protein [Homo sapiens]
Length = 236
Score = 38.9 bits (89), Expect = 0.005
Identities = 42/125 (33%), Positives = 53/125 (42%), Gaps = 16/125 (12%)
Query: 151 QLLGADAAAAAA-VQHE---AHARRTARRWLVRAPARPAAVLADGRLQGGQGGQRRSVGA 206
Q GA A AAA + H+ AH AR+ L+ A +A R G GGQ++ G
Sbjct: 119 QAQGASGATAAARLSHQLLAAHGGAAARQLLLGAGRAVDGFVAQAR--PGPGGQQQ--GG 174
Query: 207 HALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGGHGWHCGRSGGRGGGE 266
H G+ P + GA GA GE G+ AH GG W R+ G GE
Sbjct: 175 HEAEGQHDRP--RTGRGRGALGA----GGERGRAGERRRAH--GGSAWRSWRTRPGGRGE 226
Query: 267 RGAAG 271
G G
Sbjct: 227 TGRPG 231
>gi|239751298 PREDICTED: hypothetical protein XP_002347799 [Homo
sapiens]
Length = 236
Score = 38.9 bits (89), Expect = 0.005
Identities = 42/125 (33%), Positives = 53/125 (42%), Gaps = 16/125 (12%)
Query: 151 QLLGADAAAAAA-VQHE---AHARRTARRWLVRAPARPAAVLADGRLQGGQGGQRRSVGA 206
Q GA A AAA + H+ AH AR+ L+ A +A R G GGQ++ G
Sbjct: 119 QAQGASGATAAARLSHQLLAAHGGAAARQLLLGAGRAVDGFVAQAR--PGPGGQQQ--GG 174
Query: 207 HALPGRPRVPPWQPPAAAGAPGAYPAAEGEEDHEGDADGAHTGGGHGWHCGRSGGRGGGE 266
H G+ P + GA GA GE G+ AH GG W R+ G GE
Sbjct: 175 HEAEGQHDRP--RTGRGRGALGA----GGERGRAGERRRAH--GGSAWRSWRTRPGGRGE 226
Query: 267 RGAAG 271
G G
Sbjct: 227 TGRPG 231
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,472,384
Number of Sequences: 37866
Number of extensions: 755083
Number of successful extensions: 8380
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 506
Number of HSP's that attempted gapping in prelim test: 5564
Number of HSP's gapped (non-prelim): 2356
length of query: 295
length of database: 18,247,518
effective HSP length: 102
effective length of query: 193
effective length of database: 14,385,186
effective search space: 2776340898
effective search space used: 2776340898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.