Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169169319
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169169319 PREDICTED: hypothetical protein LOC285754 [Homo
sapiens]
(1151 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169169319 PREDICTED: hypothetical protein LOC285754 [Homo sap... 2309 0.0
gi|169168870 PREDICTED: hypothetical protein LOC285754 [Homo sap... 2303 0.0
gi|169169865 PREDICTED: hypothetical protein LOC285754 [Homo sap... 2294 0.0
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 38 0.063
gi|221139761 zinc finger protein 853 [Homo sapiens] 37 0.083
gi|81295809 pericentrin [Homo sapiens] 37 0.11
gi|221219020 NYD-SP11 protein [Homo sapiens] 36 0.24
gi|110347418 structural maintenance of chromosomes 2 [Homo sapiens] 35 0.31
gi|110347425 structural maintenance of chromosomes 2 [Homo sapiens] 35 0.31
gi|110347420 structural maintenance of chromosomes 2 [Homo sapiens] 35 0.31
gi|46852174 kinesin family member 3A [Homo sapiens] 34 0.70
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 34 0.70
gi|31083351 Sec6 protein [Homo sapiens] 33 1.6
gi|11761629 fibrinogen, alpha polypeptide isoform alpha prepropr... 32 2.7
gi|4503689 fibrinogen, alpha polypeptide isoform alpha-E preprop... 32 2.7
gi|111494235 GRINL1A combined protein isoform 8 [Homo sapiens] 32 2.7
gi|217035164 coiled-coil domain containing 27 [Homo sapiens] 32 2.7
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 32 3.5
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 32 3.5
gi|92859701 myosin VI [Homo sapiens] 32 3.5
gi|13699824 kinesin family member 11 [Homo sapiens] 32 4.5
gi|34878904 synaptonemal complex protein 1 [Homo sapiens] 32 4.5
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 32 4.5
gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens] 32 4.5
gi|124249396 coiled-coil domain containing 30 [Homo sapiens] 31 5.9
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 31 5.9
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 31 5.9
gi|16262452 cingulin [Homo sapiens] 31 5.9
gi|96975038 coiled-coil domain containing 100 [Homo sapiens] 31 5.9
gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo sapi... 31 7.7
>gi|169169319 PREDICTED: hypothetical protein LOC285754 [Homo sapiens]
Length = 1151
Score = 2309 bits (5984), Expect = 0.0
Identities = 1151/1151 (100%), Positives = 1151/1151 (100%)
Query: 1 MEQSVYGQCKSCCSNLTAVLCLAETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLT 60
MEQSVYGQCKSCCSNLTAVLCLAETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLT
Sbjct: 1 MEQSVYGQCKSCCSNLTAVLCLAETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLT 60
Query: 61 ELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQV 120
ELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQV
Sbjct: 61 ELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQV 120
Query: 121 AESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFC 180
AESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFC
Sbjct: 121 AESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFC 180
Query: 181 QHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNNPPNLVTQEDLTIY 240
QHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNNPPNLVTQEDLTIY
Sbjct: 181 QHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNNPPNLVTQEDLTIY 240
Query: 241 TKWLVCHLHSLGTVHQYLQALQYLPISKVLSVAFNRVAEAGQKNENVCVNDIDPDIQGSA 300
TKWLVCHLHSLGTVHQYLQALQYLPISKVLSVAFNRVAEAGQKNENVCVNDIDPDIQGSA
Sbjct: 241 TKWLVCHLHSLGTVHQYLQALQYLPISKVLSVAFNRVAEAGQKNENVCVNDIDPDIQGSA 300
Query: 301 SPDPVDTSISGPMRTEAAFVLPQHATETGELKPQLKLLLSHFSIPYDVEELWDSAKEMEL 360
SPDPVDTSISGPMRTEAAFVLPQHATETGELKPQLKLLLSHFSIPYDVEELWDSAKEMEL
Sbjct: 301 SPDPVDTSISGPMRTEAAFVLPQHATETGELKPQLKLLLSHFSIPYDVEELWDSAKEMEL 360
Query: 361 FSLVSQKFQSVFMEQQRLQMFPDCEAGIAKADNLGLAGPRMTLKKKANWISFIKIKPKCD 420
FSLVSQKFQSVFMEQQRLQMFPDCEAGIAKADNLGLAGPRMTLKKKANWISFIKIKPKCD
Sbjct: 361 FSLVSQKFQSVFMEQQRLQMFPDCEAGIAKADNLGLAGPRMTLKKKANWISFIKIKPKCD 420
Query: 421 PWQKKLLTKLKERRRTDALLQLQAKFLKNKNMKDDDLSMKQNENDLSQITLSQHADGPLK 480
PWQKKLLTKLKERRRTDALLQLQAKFLKNKNMKDDDLSMKQNENDLSQITLSQHADGPLK
Sbjct: 421 PWQKKLLTKLKERRRTDALLQLQAKFLKNKNMKDDDLSMKQNENDLSQITLSQHADGPLK 480
Query: 481 QIQETGYNYAMTLQLLGLEDGTDPSDRNPVLMRGAYLSFLYLCHLRIRELQHICLGILNY 540
QIQETGYNYAMTLQLLGLEDGTDPSDRNPVLMRGAYLSFLYLCHLRIRELQHICLGILNY
Sbjct: 481 QIQETGYNYAMTLQLLGLEDGTDPSDRNPVLMRGAYLSFLYLCHLRIRELQHICLGILNY 540
Query: 541 FRSVERTLTINTSGLTLVSGKLVPTMEDSSWVNMAKGGLGTLQGLGAHHYVRETPAEHKV 600
FRSVERTLTINTSGLTLVSGKLVPTMEDSSWVNMAKGGLGTLQGLGAHHYVRETPAEHKV
Sbjct: 541 FRSVERTLTINTSGLTLVSGKLVPTMEDSSWVNMAKGGLGTLQGLGAHHYVRETPAEHKV 600
Query: 601 HSVQFMEFSEVENQDDYYSTEAGCIHTQDQQGVHVMYEEALSDLKELEAELLLVASHYIE 660
HSVQFMEFSEVENQDDYYSTEAGCIHTQDQQGVHVMYEEALSDLKELEAELLLVASHYIE
Sbjct: 601 HSVQFMEFSEVENQDDYYSTEAGCIHTQDQQGVHVMYEEALSDLKELEAELLLVASHYIE 660
Query: 661 KERGHKVGSQPKSGQEWGWAHADVDRFAVLYDTWTWEAALLENKRQLLDSYFEAYQHTLD 720
KERGHKVGSQPKSGQEWGWAHADVDRFAVLYDTWTWEAALLENKRQLLDSYFEAYQHTLD
Sbjct: 661 KERGHKVGSQPKSGQEWGWAHADVDRFAVLYDTWTWEAALLENKRQLLDSYFEAYQHTLD 720
Query: 721 PEERFTLAQVMTDIVHRRPRFDLSHPYFIKAYQEECTCLRLHLQLVRGILNQQIERQREY 780
PEERFTLAQVMTDIVHRRPRFDLSHPYFIKAYQEECTCLRLHLQLVRGILNQQIERQREY
Sbjct: 721 PEERFTLAQVMTDIVHRRPRFDLSHPYFIKAYQEECTCLRLHLQLVRGILNQQIERQREY 780
Query: 781 VQRLWREDHLDNSNTFGLPLNIVCKQLISINNSCPASKNVYLLEFHPSLSLAALIPKALE 840
VQRLWREDHLDNSNTFGLPLNIVCKQLISINNSCPASKNVYLLEFHPSLSLAALIPKALE
Sbjct: 781 VQRLWREDHLDNSNTFGLPLNIVCKQLISINNSCPASKNVYLLEFHPSLSLAALIPKALE 840
Query: 841 HLFQEACHACRPTSASGLASLERHVLQLALDLWLTPATPEAWYSTQLQKDLFSAKVMGDP 900
HLFQEACHACRPTSASGLASLERHVLQLALDLWLTPATPEAWYSTQLQKDLFSAKVMGDP
Sbjct: 841 HLFQEACHACRPTSASGLASLERHVLQLALDLWLTPATPEAWYSTQLQKDLFSAKVMGDP 900
Query: 901 FLVGEIGLLAFKSAADEGQKQDQDSHVLLLEMFSKLLELLTLRHRLIEMSLESAHLARLY 960
FLVGEIGLLAFKSAADEGQKQDQDSHVLLLEMFSKLLELLTLRHRLIEMSLESAHLARLY
Sbjct: 901 FLVGEIGLLAFKSAADEGQKQDQDSHVLLLEMFSKLLELLTLRHRLIEMSLESAHLARLY 960
Query: 961 KELAWEMGFEEFHLYLRPVHFEFASHGDRADQPPPVFITSLLEDSGRVDRYSPTALVLAI 1020
KELAWEMGFEEFHLYLRPVHFEFASHGDRADQPPPVFITSLLEDSGRVDRYSPTALVLAI
Sbjct: 961 KELAWEMGFEEFHLYLRPVHFEFASHGDRADQPPPVFITSLLEDSGRVDRYSPTALVLAI 1020
Query: 1021 SEVDDNQIGKFSFYTKEAILKLLLHSGVENMQVTLACQAAQKNALMAAVQQVYFYCTPQG 1080
SEVDDNQIGKFSFYTKEAILKLLLHSGVENMQVTLACQAAQKNALMAAVQQVYFYCTPQG
Sbjct: 1021 SEVDDNQIGKFSFYTKEAILKLLLHSGVENMQVTLACQAAQKNALMAAVQQVYFYCTPQG 1080
Query: 1081 SCPANVKVSLHDREARGISSPPPANVRLPLSSFLFSLLPFSLSFSPAPYFLFPISLSSLL 1140
SCPANVKVSLHDREARGISSPPPANVRLPLSSFLFSLLPFSLSFSPAPYFLFPISLSSLL
Sbjct: 1081 SCPANVKVSLHDREARGISSPPPANVRLPLSSFLFSLLPFSLSFSPAPYFLFPISLSSLL 1140
Query: 1141 SFFLPFLVSCL 1151
SFFLPFLVSCL
Sbjct: 1141 SFFLPFLVSCL 1151
>gi|169168870 PREDICTED: hypothetical protein LOC285754 [Homo sapiens]
Length = 1151
Score = 2303 bits (5967), Expect = 0.0
Identities = 1148/1151 (99%), Positives = 1148/1151 (99%)
Query: 1 MEQSVYGQCKSCCSNLTAVLCLAETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLT 60
MEQSVYGQCKSCCSNLTAVLCLAETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLT
Sbjct: 1 MEQSVYGQCKSCCSNLTAVLCLAETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLT 60
Query: 61 ELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQV 120
ELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQV
Sbjct: 61 ELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQV 120
Query: 121 AESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFC 180
AESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFC
Sbjct: 121 AESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFC 180
Query: 181 QHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNNPPNLVTQEDLTIY 240
QHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNNPPNLVTQEDLTIY
Sbjct: 181 QHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNNPPNLVTQEDLTIY 240
Query: 241 TKWLVCHLHSLGTVHQYLQALQYLPISKVLSVAFNRVAEAGQKNENVCVNDIDPDIQGSA 300
TKWLVCHLHSLGTVHQYLQALQYLPISKVLSVAFNRVAE GQKNENVCVNDIDPDIQGSA
Sbjct: 241 TKWLVCHLHSLGTVHQYLQALQYLPISKVLSVAFNRVAEVGQKNENVCVNDIDPDIQGSA 300
Query: 301 SPDPVDTSISGPMRTEAAFVLPQHATETGELKPQLKLLLSHFSIPYDVEELWDSAKEMEL 360
SPDPVDTSISGPMRTEAAFVLPQHATETGELKPQLKLLLSHFSIPYDVEELWDSAKEMEL
Sbjct: 301 SPDPVDTSISGPMRTEAAFVLPQHATETGELKPQLKLLLSHFSIPYDVEELWDSAKEMEL 360
Query: 361 FSLVSQKFQSVFMEQQRLQMFPDCEAGIAKADNLGLAGPRMTLKKKANWISFIKIKPKCD 420
FSLVSQKFQSVFMEQQRLQMFPDCEAGIAKADNLGLAGPRMTLKKKANWISFIKIKPKCD
Sbjct: 361 FSLVSQKFQSVFMEQQRLQMFPDCEAGIAKADNLGLAGPRMTLKKKANWISFIKIKPKCD 420
Query: 421 PWQKKLLTKLKERRRTDALLQLQAKFLKNKNMKDDDLSMKQNENDLSQITLSQHADGPLK 480
PWQKKLLTKLKERRRTDALLQLQAKFLKNKNMKDDDLSMKQNENDLSQITLSQHADGPLK
Sbjct: 421 PWQKKLLTKLKERRRTDALLQLQAKFLKNKNMKDDDLSMKQNENDLSQITLSQHADGPLK 480
Query: 481 QIQETGYNYAMTLQLLGLEDGTDPSDRNPVLMRGAYLSFLYLCHLRIRELQHICLGILNY 540
QIQETGYNYAMTLQLLGLEDGTDPSDRNPVLMRGAYLSFLYLCHLRIRELQHICLGILNY
Sbjct: 481 QIQETGYNYAMTLQLLGLEDGTDPSDRNPVLMRGAYLSFLYLCHLRIRELQHICLGILNY 540
Query: 541 FRSVERTLTINTSGLTLVSGKLVPTMEDSSWVNMAKGGLGTLQGLGAHHYVRETPAEHKV 600
FRSVERTLTINT GLTLVSGKLVPTMEDSSWVNMAKGGLGTLQGLGAHHYVRETPAEHKV
Sbjct: 541 FRSVERTLTINTLGLTLVSGKLVPTMEDSSWVNMAKGGLGTLQGLGAHHYVRETPAEHKV 600
Query: 601 HSVQFMEFSEVENQDDYYSTEAGCIHTQDQQGVHVMYEEALSDLKELEAELLLVASHYIE 660
HSVQFMEFSEVENQDDYYSTEAGCIHTQDQQGVHVMYEEALSDLKELEAELLLVASHYIE
Sbjct: 601 HSVQFMEFSEVENQDDYYSTEAGCIHTQDQQGVHVMYEEALSDLKELEAELLLVASHYIE 660
Query: 661 KERGHKVGSQPKSGQEWGWAHADVDRFAVLYDTWTWEAALLENKRQLLDSYFEAYQHTLD 720
KERGHKVGSQPKSGQEWGWAHADVDRFAVLYDTWTWEAALLENKRQLLDSYFEAYQHTLD
Sbjct: 661 KERGHKVGSQPKSGQEWGWAHADVDRFAVLYDTWTWEAALLENKRQLLDSYFEAYQHTLD 720
Query: 721 PEERFTLAQVMTDIVHRRPRFDLSHPYFIKAYQEECTCLRLHLQLVRGILNQQIERQREY 780
PEERFTLAQVMTDIVHRRPRFDLSHPYFIKAYQEECTCLRLHLQLVRGILNQQIERQREY
Sbjct: 721 PEERFTLAQVMTDIVHRRPRFDLSHPYFIKAYQEECTCLRLHLQLVRGILNQQIERQREY 780
Query: 781 VQRLWREDHLDNSNTFGLPLNIVCKQLISINNSCPASKNVYLLEFHPSLSLAALIPKALE 840
VQRLWREDHLDNSNTFGLPLNIVCKQLISINNSCPASKNVYLLEFHPSLSLAALIPKALE
Sbjct: 781 VQRLWREDHLDNSNTFGLPLNIVCKQLISINNSCPASKNVYLLEFHPSLSLAALIPKALE 840
Query: 841 HLFQEACHACRPTSASGLASLERHVLQLALDLWLTPATPEAWYSTQLQKDLFSAKVMGDP 900
HLFQEACHACRPTSASGLASLERHVLQLALDLWLTPATPEAWYSTQLQKDLFSAKVMGDP
Sbjct: 841 HLFQEACHACRPTSASGLASLERHVLQLALDLWLTPATPEAWYSTQLQKDLFSAKVMGDP 900
Query: 901 FLVGEIGLLAFKSAADEGQKQDQDSHVLLLEMFSKLLELLTLRHRLIEMSLESAHLARLY 960
FLVGEIGLLAFKSAADEGQKQ QDSHVLLLEMFSKLLELLTLRHRLIEMSLESAHLARLY
Sbjct: 901 FLVGEIGLLAFKSAADEGQKQGQDSHVLLLEMFSKLLELLTLRHRLIEMSLESAHLARLY 960
Query: 961 KELAWEMGFEEFHLYLRPVHFEFASHGDRADQPPPVFITSLLEDSGRVDRYSPTALVLAI 1020
KELAWEMGFEEFHLYLRPVHFEFASHGDRADQPPPVFITSLLEDSGRVDRYSPTALVLAI
Sbjct: 961 KELAWEMGFEEFHLYLRPVHFEFASHGDRADQPPPVFITSLLEDSGRVDRYSPTALVLAI 1020
Query: 1021 SEVDDNQIGKFSFYTKEAILKLLLHSGVENMQVTLACQAAQKNALMAAVQQVYFYCTPQG 1080
SEVDDNQIGKFSFYTKEAILKLLLHSGVENMQVTLACQAAQKNALMAAVQQVYFYCTPQG
Sbjct: 1021 SEVDDNQIGKFSFYTKEAILKLLLHSGVENMQVTLACQAAQKNALMAAVQQVYFYCTPQG 1080
Query: 1081 SCPANVKVSLHDREARGISSPPPANVRLPLSSFLFSLLPFSLSFSPAPYFLFPISLSSLL 1140
SCPANVKVSLHDREARGISSPPPANVRLPLSSFLFSLLPFSLSFSPAPYFLFPISLSSLL
Sbjct: 1081 SCPANVKVSLHDREARGISSPPPANVRLPLSSFLFSLLPFSLSFSPAPYFLFPISLSSLL 1140
Query: 1141 SFFLPFLVSCL 1151
SFFLPFLVSCL
Sbjct: 1141 SFFLPFLVSCL 1151
>gi|169169865 PREDICTED: hypothetical protein LOC285754 [Homo sapiens]
Length = 1151
Score = 2294 bits (5944), Expect = 0.0
Identities = 1143/1151 (99%), Positives = 1146/1151 (99%)
Query: 1 MEQSVYGQCKSCCSNLTAVLCLAETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLT 60
MEQSVYGQCKSCCSNLTAVLCLAETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLT
Sbjct: 1 MEQSVYGQCKSCCSNLTAVLCLAETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLT 60
Query: 61 ELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQV 120
ELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQV
Sbjct: 61 ELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQV 120
Query: 121 AESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFC 180
AESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERI QLAQSKYLHMLRWKRFC
Sbjct: 121 AESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERITQLAQSKYLHMLRWKRFC 180
Query: 181 QHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNNPPNLVTQEDLTIY 240
QHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNNPPNLVTQEDLTIY
Sbjct: 181 QHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNNPPNLVTQEDLTIY 240
Query: 241 TKWLVCHLHSLGTVHQYLQALQYLPISKVLSVAFNRVAEAGQKNENVCVNDIDPDIQGSA 300
TKWLVCHLHSLGTVHQYLQALQYLPISKVLSVAFN+VAE GQKNENVCVNDIDPDIQGSA
Sbjct: 241 TKWLVCHLHSLGTVHQYLQALQYLPISKVLSVAFNQVAEVGQKNENVCVNDIDPDIQGSA 300
Query: 301 SPDPVDTSISGPMRTEAAFVLPQHATETGELKPQLKLLLSHFSIPYDVEELWDSAKEMEL 360
SPDPVDTSISGPMRTEAAFVLPQHATETGELKPQLKLLLSHFSIPYDVEELWDSAKEMEL
Sbjct: 301 SPDPVDTSISGPMRTEAAFVLPQHATETGELKPQLKLLLSHFSIPYDVEELWDSAKEMEL 360
Query: 361 FSLVSQKFQSVFMEQQRLQMFPDCEAGIAKADNLGLAGPRMTLKKKANWISFIKIKPKCD 420
FSLVSQKFQS+FMEQQRLQMFPD EAGIAKADNLGLAGPRMTLKK+ANWISFIKIKPKCD
Sbjct: 361 FSLVSQKFQSIFMEQQRLQMFPDYEAGIAKADNLGLAGPRMTLKKRANWISFIKIKPKCD 420
Query: 421 PWQKKLLTKLKERRRTDALLQLQAKFLKNKNMKDDDLSMKQNENDLSQITLSQHADGPLK 480
PWQKKLLTKLKERRRTDALLQLQAKFLKNKNMKDDDLSMKQNENDLSQITLSQHADGPLK
Sbjct: 421 PWQKKLLTKLKERRRTDALLQLQAKFLKNKNMKDDDLSMKQNENDLSQITLSQHADGPLK 480
Query: 481 QIQETGYNYAMTLQLLGLEDGTDPSDRNPVLMRGAYLSFLYLCHLRIRELQHICLGILNY 540
QIQETGYNYAMTLQLLGLEDGTDPSDRNPVLMRGAYLSFLYLCHLRIRELQHICLGILNY
Sbjct: 481 QIQETGYNYAMTLQLLGLEDGTDPSDRNPVLMRGAYLSFLYLCHLRIRELQHICLGILNY 540
Query: 541 FRSVERTLTINTSGLTLVSGKLVPTMEDSSWVNMAKGGLGTLQGLGAHHYVRETPAEHKV 600
FRSVERTLTINT GLTLVSGKLVPTMEDSSWVNMAKGGLGTLQGLGAHHYVRETPAEHKV
Sbjct: 541 FRSVERTLTINTLGLTLVSGKLVPTMEDSSWVNMAKGGLGTLQGLGAHHYVRETPAEHKV 600
Query: 601 HSVQFMEFSEVENQDDYYSTEAGCIHTQDQQGVHVMYEEALSDLKELEAELLLVASHYIE 660
HSVQFMEFSEVENQDDYYSTEAGCIHTQDQQGVHVMYEEALSDLKELEAELLLVASHYIE
Sbjct: 601 HSVQFMEFSEVENQDDYYSTEAGCIHTQDQQGVHVMYEEALSDLKELEAELLLVASHYIE 660
Query: 661 KERGHKVGSQPKSGQEWGWAHADVDRFAVLYDTWTWEAALLENKRQLLDSYFEAYQHTLD 720
KERGHKVGSQPKSGQEWGWAHADVDRFAVLYDTWTWEAALLENKRQLLDSYFEAYQHTLD
Sbjct: 661 KERGHKVGSQPKSGQEWGWAHADVDRFAVLYDTWTWEAALLENKRQLLDSYFEAYQHTLD 720
Query: 721 PEERFTLAQVMTDIVHRRPRFDLSHPYFIKAYQEECTCLRLHLQLVRGILNQQIERQREY 780
PEERFTLAQVMTDIVHRRPRFDLSHPYFIKAYQEECTCLRLHLQLVRGILNQQIERQREY
Sbjct: 721 PEERFTLAQVMTDIVHRRPRFDLSHPYFIKAYQEECTCLRLHLQLVRGILNQQIERQREY 780
Query: 781 VQRLWREDHLDNSNTFGLPLNIVCKQLISINNSCPASKNVYLLEFHPSLSLAALIPKALE 840
VQRLWREDHLDNSNTFGLPLNIVCKQLISINNSCPASKNVYLLEFHPSLSLAALIPKALE
Sbjct: 781 VQRLWREDHLDNSNTFGLPLNIVCKQLISINNSCPASKNVYLLEFHPSLSLAALIPKALE 840
Query: 841 HLFQEACHACRPTSASGLASLERHVLQLALDLWLTPATPEAWYSTQLQKDLFSAKVMGDP 900
HLFQEACHACRPTSASGLASLERHVLQLALDLWLTPATPEAWYSTQLQKDLFSAKVMGDP
Sbjct: 841 HLFQEACHACRPTSASGLASLERHVLQLALDLWLTPATPEAWYSTQLQKDLFSAKVMGDP 900
Query: 901 FLVGEIGLLAFKSAADEGQKQDQDSHVLLLEMFSKLLELLTLRHRLIEMSLESAHLARLY 960
FLVGEIGLLAFKSAADEGQKQ QDSHVLLLEMFSKLLELLTLRHRLIEMSLESAHLARLY
Sbjct: 901 FLVGEIGLLAFKSAADEGQKQGQDSHVLLLEMFSKLLELLTLRHRLIEMSLESAHLARLY 960
Query: 961 KELAWEMGFEEFHLYLRPVHFEFASHGDRADQPPPVFITSLLEDSGRVDRYSPTALVLAI 1020
KELAWEMGFEEFHLYLRPVHFEFASHGDRADQPPPVFITSLLEDSGRVDRYSPTALVLAI
Sbjct: 961 KELAWEMGFEEFHLYLRPVHFEFASHGDRADQPPPVFITSLLEDSGRVDRYSPTALVLAI 1020
Query: 1021 SEVDDNQIGKFSFYTKEAILKLLLHSGVENMQVTLACQAAQKNALMAAVQQVYFYCTPQG 1080
SEVDDNQIGKFSFYTKEAILKLLLHSGVENMQVTLACQAAQKNALMAAVQQVYFYCTPQG
Sbjct: 1021 SEVDDNQIGKFSFYTKEAILKLLLHSGVENMQVTLACQAAQKNALMAAVQQVYFYCTPQG 1080
Query: 1081 SCPANVKVSLHDREARGISSPPPANVRLPLSSFLFSLLPFSLSFSPAPYFLFPISLSSLL 1140
SCPANVKVSLHDREARGISSPPPANVRLPLSSFLFSLLPFSLSFSPAPYFLFPISLSSLL
Sbjct: 1081 SCPANVKVSLHDREARGISSPPPANVRLPLSSFLFSLLPFSLSFSPAPYFLFPISLSSLL 1140
Query: 1141 SFFLPFLVSCL 1151
SFFLPFLVSCL
Sbjct: 1141 SFFLPFLVSCL 1151
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 37.7 bits (86), Expect = 0.063
Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 30 KQQIQ-IMDEIYKITSTERV--QLLEKKLA--------------VQLTELKSEIEEQGAL 72
KQ ++ + D++ K + + Q+LE+K+ V++ EL S+ E+ AL
Sbjct: 1828 KQNLENVFDDVQKTLQEKELTCQILEQKIKELDSCLVRQKEVHRVEMEELTSKYEKLQAL 1887
Query: 73 QGTANRVYRIEIKRDHQTEQQQSSIQMPKDIYYFR-RERELALKKTLQVAESKPLVVQAD 131
Q R E+ ++ E+ +S + PK + + +L K E + L +
Sbjct: 1888 QQMDGRNKPTELLEENTEEKSKSHLVQPKLLSNMEAQHNDLEFKLAGAEREKQKLGKEIV 1947
Query: 132 AVQRELESCLRREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFCQHSKIMEQLYP 191
+Q++L LR+E+ E L +L +Y ER ++ Q + L+ H+ ++QL
Sbjct: 1948 RLQKDLR-MLRKEHQQE-LEILKKEYDQEREEKIKQEQEDLELK------HNSTLKQLMR 1999
Query: 192 LYKKQVGYIMQEYNDTLQRAERLSVARE 219
+ Q+ QE T++ E ++ A+E
Sbjct: 2000 EFNTQLAQKEQELEMTIK--ETINKAQE 2025
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 37.4 bits (85), Expect = 0.083
Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 17/218 (7%)
Query: 52 EKKLAVQLTELKSEIE---EQGALQGT-ANRVYRIEIKRDH-QTEQQQSS--IQMPKDIY 104
EK +V ELK E++ +Q LQ R++ +++ QT+Q Q +Q + +
Sbjct: 136 EKHQSVHHQELKPELQLMHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQ 195
Query: 105 YFRRERELALKKTLQVAESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERIAQ 164
+E++L ++ Q+ + + L Q Q++ + ++E + LLLLQ + Q
Sbjct: 196 QQVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQ--QQEQLQQQQQLLLLQQQGQLQQQ 253
Query: 165 LAQSKYLHMLRWKRFCQHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMG 224
L Q + + +++EQ ++Q+ QE Q+ + L +E
Sbjct: 254 LLQQQQAQL--------QQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQ 305
Query: 225 KNNPPNLVTQEDLTIYTKWLVCHLHSLGTVHQYLQALQ 262
+ PP L +E+ + + + L S + Q Q L+
Sbjct: 306 QLQPPPLEPEEEEEVELELMPVDLGSEQELEQQRQELE 343
Score = 30.8 bits (68), Expect = 7.7
Identities = 29/144 (20%), Positives = 65/144 (45%), Gaps = 13/144 (9%)
Query: 29 EKQQIQIMDEIYKITSTERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIEI---- 84
E+Q++Q E + + Q+L+ Q +L+ +++EQ LQ ++ + ++
Sbjct: 166 EQQRLQQQQEQLQTQQAQEQQVLQ-----QQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQ 220
Query: 85 --KRDHQTEQQQSSIQMPKDIYYFRREREL--ALKKTLQVAESKPLVVQADAVQRELESC 140
+ Q +QQQ +Q + + +++ +L L + Q + L+ Q A ++
Sbjct: 221 EQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQAQLQQQLLEQQQAQLQQQLLL 280
Query: 141 LRREYTPENLPLLLLQYYTERIAQ 164
++E + LLQ E++ Q
Sbjct: 281 QQQEQLQQQQQQQLLQQQQEQLQQ 304
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 37.0 bits (84), Expect = 0.11
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 15 NLTAVLCLAETWDTEKQQIQIMDEIYKITSTER---VQLLEKKLAVQLTELKSEIEEQGA 71
N V L E W++EK ++ + K S + ++ L+ + +L E ++E+E+
Sbjct: 339 NAQIVKTLKEDWESEKDLC--LENLRKELSAKHQSEMEDLQNQFQKELAEQRAELEKIFQ 396
Query: 72 LQGTANRVYRI----------EIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQVA 121
+ A R R +++ D Q+E + + +E++L L+ LQ A
Sbjct: 397 DKNQAERALRNLESHHQAAIEKLREDLQSEHGRCLEDLEFKFKESEKEKQLELEN-LQ-A 454
Query: 122 ESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFCQ 181
+ L Q+ R L S L T L + + + +A+ ++ + L L+ + Q
Sbjct: 455 SYEDLKAQSQEEIRRLWSQLDSARTSRQE---LSELHEQLLARTSRVEDLEQLKQREKTQ 511
Query: 182 HSKIMEQLYPLYKKQVGYIMQEYNDTLQ-RAERLSVARENFLM 223
H +EQL ++K++ + Y + L +RL ARE+ L+
Sbjct: 512 HESELEQLRIYFEKKLRDAEKTYQEDLTLLQQRLQGAREDALL 554
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 35.8 bits (81), Expect = 0.24
Identities = 90/446 (20%), Positives = 173/446 (38%), Gaps = 53/446 (11%)
Query: 52 EKKLAVQLTELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIYYFRRERE 111
EK+LA +L EL+ ++EE + N+ ++ + +++ ++ ++ E +
Sbjct: 1711 EKELAQELEELEWDMEELSWKEEELNQEEGKLVEEKKKLAEEEEALAWQRE-KLSEEETK 1769
Query: 112 LALKKTLQVAESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERIAQLAQSKYL 171
LA ++ L + E + L + + E E R+ + E+ +LAQ +
Sbjct: 1770 LAQEEELLIQEKEKLAQHKEKMPEEEERLGRKR-----------EQLIEKKMKLAQKRE- 1817
Query: 172 HMLRWKRFCQHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNNPPNL 231
RW + ++ + LY+K+ + QE + Q E+L+ +EN L K
Sbjct: 1818 ---RWINSME--ELTKNKMILYQKK--NLAQEKKNLAQEKEKLAQRKENLLYNK------ 1864
Query: 232 VTQEDLTIYTKWLVCHLHSLGTVHQYLQALQYLPISKVLSVAFNRVAEAGQKNENVCVND 291
E LT K LV + LG ++ L ++ + +V + A + + V V D
Sbjct: 1865 ---ERLTHSKKQLVQVKNKLGMFNKILAQVEEKLTQEKETVIKKKEKLAETEKKLVQVED 1921
Query: 292 IDPDIQGSASPDPVDTSISGPM-------RTEAAFVLPQHA-----TETGELKPQL---K 336
Q + + + ++ M R E + A E K +L K
Sbjct: 1922 SLAKKQEKLAQEKMKLALEKAMVQGKKRLRGELDIAKEEKALNLEMKRLAEEKMRLVEGK 1981
Query: 337 LLLSHFSIPYDVEELWDSAKEMELFSLVSQKFQSVFMEQQRLQMFPDCEAGIAKAD---- 392
LS P + + E ELF + + + + R+ + E K +
Sbjct: 1982 ETLSKGETPETSRQRKMTQVEQELFERKLSLEEKILLHEDRILAMEESEIAKGKLEFTRG 2041
Query: 393 -NLGLAGPRMTLKKKANWISFIKIKPKCDPWQKKLLTKLKERRRTD-ALLQLQAKFLKNK 450
+ + G R K I + K K+L L++ R + L Q + K K K
Sbjct: 2042 QRIFVQGQRKLAKASRKLIKKRESLSKEPAKLNKILKALQKLTRDERKLTQEEIKMTKMK 2101
Query: 451 N---MKDDDLSMKQNENDLSQITLSQ 473
+K+ LS++Q++ D+ + S+
Sbjct: 2102 RALFVKERRLSIEQSKLDIKEWDFSE 2127
>gi|110347418 structural maintenance of chromosomes 2 [Homo sapiens]
Length = 1197
Score = 35.4 bits (80), Expect = 0.31
Identities = 24/98 (24%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 42 ITSTERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPK 101
+T + ++ ++ +L ++ EL++ EE L+ TA + +++ + + +TE+ +
Sbjct: 675 LTKFQELKDVQDELRIKENELRALEEELAGLKNTAEKYRQLKQQWEMKTEEADLLQTKLQ 734
Query: 102 DIYYFRREREL-ALKKTLQVAESKPLVVQADAVQRELE 138
Y +++ EL ALKKT++ ES+ + +QR+ E
Sbjct: 735 QSSYHKQQEELDALKKTIE--ESEETLKNTKEIQRKAE 770
Score = 30.8 bits (68), Expect = 7.7
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 23 AETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRI 82
AE + KQQ ++ E + T+ Q K +L LK IEE + R
Sbjct: 709 AEKYRQLKQQWEMKTEEADLLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQRK 768
Query: 83 EIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQVAESKPL---VVQADAVQRELES 139
++ E + + + ++ +++L KT A SK + + +A+ ELE
Sbjct: 769 AEEKYEVLENKMKNAEAERERELKDAQKKLDCAKTKADASSKKMKEKQQEVEAITLELEE 828
Query: 140 CLRREYT 146
L+RE+T
Sbjct: 829 -LKREHT 834
>gi|110347425 structural maintenance of chromosomes 2 [Homo sapiens]
Length = 1197
Score = 35.4 bits (80), Expect = 0.31
Identities = 24/98 (24%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 42 ITSTERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPK 101
+T + ++ ++ +L ++ EL++ EE L+ TA + +++ + + +TE+ +
Sbjct: 675 LTKFQELKDVQDELRIKENELRALEEELAGLKNTAEKYRQLKQQWEMKTEEADLLQTKLQ 734
Query: 102 DIYYFRREREL-ALKKTLQVAESKPLVVQADAVQRELE 138
Y +++ EL ALKKT++ ES+ + +QR+ E
Sbjct: 735 QSSYHKQQEELDALKKTIE--ESEETLKNTKEIQRKAE 770
Score = 30.8 bits (68), Expect = 7.7
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 23 AETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRI 82
AE + KQQ ++ E + T+ Q K +L LK IEE + R
Sbjct: 709 AEKYRQLKQQWEMKTEEADLLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQRK 768
Query: 83 EIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQVAESKPL---VVQADAVQRELES 139
++ E + + + ++ +++L KT A SK + + +A+ ELE
Sbjct: 769 AEEKYEVLENKMKNAEAERERELKDAQKKLDCAKTKADASSKKMKEKQQEVEAITLELEE 828
Query: 140 CLRREYT 146
L+RE+T
Sbjct: 829 -LKREHT 834
>gi|110347420 structural maintenance of chromosomes 2 [Homo sapiens]
Length = 1197
Score = 35.4 bits (80), Expect = 0.31
Identities = 24/98 (24%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 42 ITSTERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPK 101
+T + ++ ++ +L ++ EL++ EE L+ TA + +++ + + +TE+ +
Sbjct: 675 LTKFQELKDVQDELRIKENELRALEEELAGLKNTAEKYRQLKQQWEMKTEEADLLQTKLQ 734
Query: 102 DIYYFRREREL-ALKKTLQVAESKPLVVQADAVQRELE 138
Y +++ EL ALKKT++ ES+ + +QR+ E
Sbjct: 735 QSSYHKQQEELDALKKTIE--ESEETLKNTKEIQRKAE 770
Score = 30.8 bits (68), Expect = 7.7
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 23 AETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRI 82
AE + KQQ ++ E + T+ Q K +L LK IEE + R
Sbjct: 709 AEKYRQLKQQWEMKTEEADLLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQRK 768
Query: 83 EIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQVAESKPL---VVQADAVQRELES 139
++ E + + + ++ +++L KT A SK + + +A+ ELE
Sbjct: 769 AEEKYEVLENKMKNAEAERERELKDAQKKLDCAKTKADASSKKMKEKQQEVEAITLELEE 828
Query: 140 CLRREYT 146
L+RE+T
Sbjct: 829 -LKREHT 834
>gi|46852174 kinesin family member 3A [Homo sapiens]
Length = 699
Score = 34.3 bits (77), Expect = 0.70
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Query: 23 AETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLTELKSEIEEQGALQGTAN----- 77
AE EK ++ E + E++ LEKK+ V +L ++ EEQ L +N
Sbjct: 449 AELEKREKDLLKAQQEHQSLL--EKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEE 506
Query: 78 RVYRIEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKK-----TLQVAESKPLVVQADA 132
R R E R E++Q + + + + E + KK T+ +A +
Sbjct: 507 RRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQE 566
Query: 133 VQRELESCLR--REYTPE-NLPLLLLQYYTERIAQLAQSKYLH 172
QRE+E L R+ + E L +L++ + R Q Y+H
Sbjct: 567 HQREIEGLLENIRQLSRELRLQMLIIDNFIPRDYQEMIENYVH 609
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 34.3 bits (77), Expect = 0.70
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 114 LKKTLQVAESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYT-----ERIAQLAQS 168
+ KT +V E + L+ + + + EL+ L R+ PE L L T +++ L+
Sbjct: 738 ISKTEEVVEKELLLQEKEKLYMELKHVLARQPGPEAAEQLKLYRRTLHDKKQQLKVLSSE 797
Query: 169 KYLHMLRWKRF-CQHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNN 227
++ ++ K + + K+ +L L KK Y+ Q+ + LQ+ + + FLM K N
Sbjct: 798 LNMYEVQSKEYKYEVEKLTNELQNLKKK---YLAQKRKEQLQKNKDTAPMDNTFLMVKPN 854
Query: 228 PP 229
P
Sbjct: 855 GP 856
>gi|31083351 Sec6 protein [Homo sapiens]
Length = 745
Score = 33.1 bits (74), Expect = 1.6
Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 13/139 (9%)
Query: 758 CLRLHLQLVRGILNQQIERQREYVQRLWREDHLDNSNTFGLPLNIVCKQLISINNSCPAS 817
C H ++ + +LN + +Q L ED L N + L + N+ ++
Sbjct: 300 CFPPHYEIFKNLLNMYHQALSTRMQDLASED---------LEANEIVSLLTWVLNTYTST 350
Query: 818 KNVYLLEFHPSLSLAALIPKALEHLFQEACHACRPTSASGLASLERHVLQLALDLWLTPA 877
+ + +E P + + L P H+ E T S + + R L+ W+
Sbjct: 351 EMMRNVELAPEVDVGTLEPLLSPHVVSELLDTYMSTLTSNIIAWLRKALETDKKDWVKET 410
Query: 878 TPEA----WYSTQLQKDLF 892
PEA +Y T L +F
Sbjct: 411 EPEADQDGYYQTTLPAIVF 429
>gi|11761629 fibrinogen, alpha polypeptide isoform alpha
preproprotein [Homo sapiens]
Length = 644
Score = 32.3 bits (72), Expect = 2.7
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 25 TWDTEKQQIQIMDEIYK---ITSTERVQLLEKKLAVQLTELKS-EIE---EQGALQGTAN 77
T++ + ++ E+ K I + +QLL+K + QL ++K E++ + + +G+ +
Sbjct: 126 TYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCS 185
Query: 78 RVYRIEIK-RDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQVAESKP 125
R E+ +D++ +Q+Q + KD+ R + L L K V + P
Sbjct: 186 RALAREVDLKDYEDQQKQLEQVIAKDLLPSRDRQHLPLIKMKPVPDLVP 234
>gi|4503689 fibrinogen, alpha polypeptide isoform alpha-E
preproprotein [Homo sapiens]
Length = 866
Score = 32.3 bits (72), Expect = 2.7
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 25 TWDTEKQQIQIMDEIYK---ITSTERVQLLEKKLAVQLTELKS-EIE---EQGALQGTAN 77
T++ + ++ E+ K I + +QLL+K + QL ++K E++ + + +G+ +
Sbjct: 126 TYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCS 185
Query: 78 RVYRIEIK-RDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQVAESKP 125
R E+ +D++ +Q+Q + KD+ R + L L K V + P
Sbjct: 186 RALAREVDLKDYEDQQKQLEQVIAKDLLPSRDRQHLPLIKMKPVPDLVP 234
>gi|111494235 GRINL1A combined protein isoform 8 [Homo sapiens]
Length = 438
Score = 32.3 bits (72), Expect = 2.7
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 24 ETWDTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIE 83
E D++K++ Q ++E + ER++ L+ + Q ++K +EE LQ + + +
Sbjct: 330 ELTDSDKERYQQLEEA-SASLRERIRHLDDMVHCQQKKVKQMVEENNELQSRLDYLTETQ 388
Query: 84 IKRDHQTEQ-------------QQSSIQMPKDIYY-FRRERELALKKTL 118
K + +T + + I MP Y + R EL +KKTL
Sbjct: 389 AKTEVETREIGVGCDLLPSQTGRTREIVMPSRNYTPYTRVLELTMKKTL 437
>gi|217035164 coiled-coil domain containing 27 [Homo sapiens]
Length = 656
Score = 32.3 bits (72), Expect = 2.7
Identities = 38/229 (16%), Positives = 96/229 (41%), Gaps = 18/229 (7%)
Query: 27 DTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLTELKSEIEE-QGALQGTANR------- 78
D+E++++ +EI + ++ + E++L QL E + I + Q L+ T R
Sbjct: 383 DSEERELPEEEEIPRRRASSLAESFEEELLAQLEEYEQVILDFQFNLEATRTRYSLATGV 442
Query: 79 VYRIEIKRDHQTEQQQS----SIQMPKDIYYFRRERELALKKTLQVAESKP------LVV 128
+ ++ + D Q Q + + + K++ R++ + K + E K L+
Sbjct: 443 IASLQQQVDFQETQLRKINTENETLQKELRERRQQLQAMTDKFSNLREDKKHQEMMGLIE 502
Query: 129 QADAVQRELESCLRREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFCQHSKIMEQ 188
+ + + R+ S L R+ T + + L ++ + + H+ RWK+ + + ++
Sbjct: 503 KDNQLLRQQVSELERKLTKRDCVISELDTKVSQLQEQVELDQNHLQRWKQLQEDLQSKKE 562
Query: 189 LYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNNPPNLVTQEDL 237
+ ++ ++ L+R + + G + N ++ D+
Sbjct: 563 MIQQAEQHTRVALESSQSRLERLRNKIIQATFSISGTKSLANEISDNDI 611
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 32.0 bits (71), Expect = 3.5
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 27/195 (13%)
Query: 27 DTEKQQIQIMDEIYKITSTERVQLLEKKLAVQ-----LTELKSEIEEQGALQGTANRVYR 81
++ K++IQ + I + +T+ ++ +K L ++ +L E++EQ + + +
Sbjct: 318 NSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTTADKLLGELQEQIVQKNQEIKNMK 377
Query: 82 IEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQVAESKPLVVQADAVQRELESCL 141
+E+ Q E+Q S ++ + + LQ K + D VQR +
Sbjct: 378 LELTNSKQKERQSSE----------EIKQLMGTVEELQKRNHKDSQFETDIVQRMEQETQ 427
Query: 142 RREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFCQHSKIMEQLYPLYKKQVGYIM 201
R+ E L L + Y ++I Q+ Q ++R QH ME++ +K ++ +
Sbjct: 428 RK---LEQLRAELDEMYGQQIVQMKQ----ELIR-----QHMAQMEEMKTRHKGEMENAL 475
Query: 202 QEYNDTLQRAERLSV 216
+ Y++ +++ +
Sbjct: 476 RSYSNITVNEDQIKL 490
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 32.0 bits (71), Expect = 3.5
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 27/195 (13%)
Query: 27 DTEKQQIQIMDEIYKITSTERVQLLEKKLAVQ-----LTELKSEIEEQGALQGTANRVYR 81
++ K++IQ + I + +T+ ++ +K L ++ +L E++EQ + + +
Sbjct: 318 NSNKEEIQEKETIIEELNTKIIEEEKKTLELKDKLTTADKLLGELQEQIVQKNQEIKNMK 377
Query: 82 IEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQVAESKPLVVQADAVQRELESCL 141
+E+ Q E+Q S ++ + + LQ K + D VQR +
Sbjct: 378 LELTNSKQKERQSSE----------EIKQLMGTVEELQKRNHKDSQFETDIVQRMEQETQ 427
Query: 142 RREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFCQHSKIMEQLYPLYKKQVGYIM 201
R+ E L L + Y ++I Q+ Q ++R QH ME++ +K ++ +
Sbjct: 428 RK---LEQLRAELDEMYGQQIVQMKQ----ELIR-----QHMAQMEEMKTRHKGEMENAL 475
Query: 202 QEYNDTLQRAERLSV 216
+ Y++ +++ +
Sbjct: 476 RSYSNITVNEDQIKL 490
Score = 31.6 bits (70), Expect = 4.5
Identities = 41/206 (19%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 27 DTEKQQIQIMDEIYKITSTERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIEIKR 86
D +Q+IQ +++ K+ R Q + + ++ +L + ++E+ ++ + + +
Sbjct: 2081 DVFQQEIQKLEQQLKVVP--RFQPISEHQTREVEQLANHLKEK------TDKCSELLLSK 2132
Query: 87 DHQTEQQQSSIQMPKDIYYFRRERELAL----KKTLQVAESKPLVVQADAVQRELESCLR 142
+ Q + + + + RE E AL +K E+KP + +Q E ++ R
Sbjct: 2133 EQLQRDIQERNEEIEKLEFRVRELEQALLVEDRKHFGAVEAKPELSLEVQLQAERDAIDR 2192
Query: 143 REYTPENLPLLLLQYYTERIAQLAQSKYLHM---LRWKRFCQHSKIMEQLYPLYKKQVGY 199
+E NL L Q+ E + + + LHM ++ K + +EQ L+K
Sbjct: 2193 KEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDD--- 2249
Query: 200 IMQEYNDTLQRAERLSVARENFLMGK 225
M++ ++ ++ +S ++ L GK
Sbjct: 2250 -MEKLGLAIKESDAMSTQDQHVLFGK 2274
>gi|92859701 myosin VI [Homo sapiens]
Length = 1285
Score = 32.0 bits (71), Expect = 3.5
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 52 EKKLAVQL-TELKSEIEEQGALQGTANRVY---RIEIKRDHQTEQQQSSIQMPKDIYYFR 107
E+++ +++ + K E EE+ + R+ ++ R + E QQ ++ + R
Sbjct: 953 ERRMKLEMEAKRKQEEEERKKREDDEKRIQAEVEAQLARQKEEESQQQAVLEQE-----R 1007
Query: 108 RERELALKKTLQVAESKPLVVQADAVQRELESCLRREYTPENLPLLLLQYYTERIAQLAQ 167
R+RELAL+ AE QAD R + R + TPE + + ++ + A LA
Sbjct: 1008 RDRELALRIAQSEAELISDEAQADLALRRNDG-TRPKMTPEQMAKEMSEFLSRGPAVLAT 1066
Query: 168 -----SKYLHMLRWK 177
+K + +WK
Sbjct: 1067 KAAAGTKKYDLSKWK 1081
>gi|13699824 kinesin family member 11 [Homo sapiens]
Length = 1056
Score = 31.6 bits (70), Expect = 4.5
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 44 STERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDI 103
S E +++ KL VQ ++ IE+ GA++ NRV + + ++ +Q +S +Q
Sbjct: 401 SEENFRVMSGKLTVQEEQIVELIEKIGAVEEELNRVTELFMDNKNELDQCKSDLQ----- 455
Query: 104 YYFRREREL-ALKKTLQVAESKPLVVQADAVQRELES 139
+ +EL +K LQ E+K +V+ + + LES
Sbjct: 456 ---NKTQELETTQKHLQ--ETKLQLVKEEYITSALES 487
>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
Length = 976
Score = 31.6 bits (70), Expect = 4.5
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 18/189 (9%)
Query: 44 STERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQ-QSSIQM-PK 101
S ++V LE+K +Q LK IE+Q L + ++ ++R T++ + +Q+ K
Sbjct: 292 SRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDI-KVSLQRSVSTQKALEEDLQIATK 350
Query: 102 DIYYFRRERELALKKTLQVAESKPLVV-QADAVQRELESCLRREY-----TPENLPLLLL 155
I E+E ++++ + + VV + + LE LR E + L +L +
Sbjct: 351 TICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTM 410
Query: 156 QYY-----TERIAQLAQSKYLHMLRWKRFCQHSKIMEQLYPLYKKQVGYIMQEYNDTLQR 210
+ E + +L +K + + K+ + + LY KQ I +E T Q
Sbjct: 411 ELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETL--LYE--NKQFEKIAEELKGTEQE 466
Query: 211 AERLSVARE 219
L ARE
Sbjct: 467 LIGLLQARE 475
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 31.6 bits (70), Expect = 4.5
Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 24/191 (12%)
Query: 42 ITSTERVQLL----------EKKLAVQLTELKSEIEEQGALQGTANR----------VYR 81
+ +TER+ LL +KKL L +L E+EE + A +
Sbjct: 1756 LEATERLNLLHSQNTGLLNQKKKLEADLAQLSGEVEEAAQERREAEEKAKKAITDAAMMA 1815
Query: 82 IEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQVA--ESKPLVVQADAVQRELES 139
E+K++ T +M K + RE + L++ Q A K V + +A RELE+
Sbjct: 1816 EELKKEQDTSAHLE--RMKKTLEQTVRELQARLEEAEQAALRGGKKQVQKLEAKVRELEA 1873
Query: 140 CLRREYTPENLPLLLLQYYTERIAQLAQSKYLHMLRWKRFCQHSKIMEQLYPLYKKQVGY 199
L E L ++ + R+ +LA R ++ YK+Q
Sbjct: 1874 ELDAEQKKHAEALKGVRKHERRVKELAYQAEEDRKNLARMQDLVDKLQSKVKSYKRQFEE 1933
Query: 200 IMQEYNDTLQR 210
Q+ N L +
Sbjct: 1934 AEQQANTNLAK 1944
>gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens]
Length = 757
Score = 31.6 bits (70), Expect = 4.5
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 41 KITSTERVQLLEKKLAVQLTELKSEIEE-QGALQGTANRVYRIEI---KRDHQTEQQQSS 96
K +ERVQLL+++ A LT+ + E E+ Q L+ Y ++ KR + + Q S
Sbjct: 463 KSFESERVQLLQEETARNLTQCQLECEKYQKKLEVLTKEFYSLQASSEKRITELQAQNSE 522
Query: 97 IQMPKDIYYFRREREL 112
Q DIY + E+EL
Sbjct: 523 HQARLDIYE-KLEKEL 537
>gi|124249396 coiled-coil domain containing 30 [Homo sapiens]
Length = 783
Score = 31.2 bits (69), Expect = 5.9
Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 36/245 (14%)
Query: 20 LCLAETWDTEKQQIQIMDEIYKITSTE--------RVQLLEKKLAVQLTELKSEIEEQGA 71
+CL +T +EKQQ++ ++I + T E Q K L + EL ++
Sbjct: 369 VCLTDTCISEKQQLE--EKIKEATQNEAKVKQQYQEEQQKRKLLYQNVDELHRQVR---T 423
Query: 72 LQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIYYFRRERELALKKTLQVAESKPLVVQAD 131
LQ N + + QQQS IQ + + ++ K V ++ L +
Sbjct: 424 LQDKENLL-------EMTCSQQQSRIQQQEAL--LKQLENEKRKYDEHVKSNQELSEKLS 474
Query: 132 AVQRELESCLRREYTPENLPLLLL-----QYYTERIAQLAQSKYLHMLRWKRFCQHSKIM 186
+Q+E E+ LR EY L LL L + Y E+ Q Q L +++ R ++
Sbjct: 475 KLQQEKEA-LREEY----LRLLKLLNVHVRNYNEKHHQ--QKVKLQKVKY-RLTNEVELR 526
Query: 187 EQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMGKNN-PPNLVTQEDLTIYTKWLV 245
++ ++ ++G + + ++++ + L+ K ++ QE L KW +
Sbjct: 527 DKRINQFEDEIGILQHKIEKEKAIQDQITAQNDTLLLEKRKLQEQVIEQEQLIHSNKWTI 586
Query: 246 CHLHS 250
+ S
Sbjct: 587 SSIQS 591
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 31.2 bits (69), Expect = 5.9
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 49 QLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIEIKRDHQTE----QQQSSIQMPKDIY 104
Q LEKKL V + K E E+G L+ R +E +R Q ++ + ++
Sbjct: 340 QQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQ 399
Query: 105 YFRRERELALKKTLQ---------VAESKPLVVQADAVQRELESCLRREYTPENLPLLLL 155
R+R+L L+K L+ E + + + +A +RELE + E+ LL
Sbjct: 400 EQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLN 459
Query: 156 QYYTER 161
Q E+
Sbjct: 460 QRNKEQ 465
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 31.2 bits (69), Expect = 5.9
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 49 QLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIEIKRDHQTE----QQQSSIQMPKDIY 104
Q LEKKL V + K E E+G L+ R +E +R Q ++ + ++
Sbjct: 340 QQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQ 399
Query: 105 YFRRERELALKKTLQ---------VAESKPLVVQADAVQRELESCLRREYTPENLPLLLL 155
R+R+L L+K L+ E + + + +A +RELE + E+ LL
Sbjct: 400 EQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLN 459
Query: 156 QYYTER 161
Q E+
Sbjct: 460 QRNKEQ 465
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 31.2 bits (69), Expect = 5.9
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 45 TERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIY 104
T +V++L+K+L ELK E++ + Q A R RD + E+Q + +++ D
Sbjct: 624 TRQVEVLKKELLRTQEELK-ELQAERQSQEVAGR------HRDRELEKQLAVLRVEADRG 676
Query: 105 YFRRERELALKKTLQ 119
E+ L L+KTLQ
Sbjct: 677 RELEEQNLQLQKTLQ 691
>gi|96975038 coiled-coil domain containing 100 [Homo sapiens]
Length = 986
Score = 31.2 bits (69), Expect = 5.9
Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 33/206 (16%)
Query: 45 TERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIEIKRDHQTEQQQSSIQMPKDIY 104
TE + LE K A++L E+ E++E ++ ++K+ Q + + K
Sbjct: 643 TEPRETLEYKAALEL-EMWKEMQED---------IFENQLKQKELAHMQALAEEWKKR-- 690
Query: 105 YFRRERELALKKTLQ---VAESKPLVVQADAVQRE-----LESCLRREYTPENLPLLLLQ 156
RERE +KK + + E K D +RE +ES L+RE LQ
Sbjct: 691 --DRERESLVKKKVAEYTILEGKLQKTLIDLEKREQQLASVESELQREKKE-------LQ 741
Query: 157 YYTERIAQLAQSKYLHMLRWKRFCQHSKIMEQL-YPLYKKQVGYIMQEYNDTLQRAERLS 215
+R Q Q + R K C H +E+L ++ + Q+ ND + + L
Sbjct: 742 SERQRNLQELQDS---IRRAKEDCIHQVELERLKIKQLEEDKHRLQQQLNDAENKYKILE 798
Query: 216 VARENFLMGKNNPPNLVTQEDLTIYT 241
+ F +NN P + Q ++ + T
Sbjct: 799 KEFQQFKDQQNNKPEIRLQSEINLLT 824
>gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo
sapiens]
Length = 1157
Score = 30.8 bits (68), Expect = 7.7
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 30 KQQIQIMDEIY--KITSTERVQLLEKKLAVQLTELKSEIEEQGALQGTANRVYRIEIKRD 87
K++ +++ +I K ++R ++L+K VQ +E + + + GT NR+Y + K D
Sbjct: 74 KKEKKVLQKILEQKEKKSQRAEMLQKLSEVQASEAEMRLFYTTSKLGTGNRMYHTKEKAD 133
Query: 88 HQTEQQQSSIQMPKDIYYFRRERELALKKTLQVAESK 124
Q I + RR A ++ + ES+
Sbjct: 134 EVVAPGQEKISSLSGAHRKRRRWPSAEEEEEEEEESE 170
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,042,263
Number of Sequences: 37866
Number of extensions: 1912423
Number of successful extensions: 5373
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 5330
Number of HSP's gapped (non-prelim): 79
length of query: 1151
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1038
effective length of database: 13,968,660
effective search space: 14499469080
effective search space used: 14499469080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.