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Search of human proteins with 169168737
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169168737 PREDICTED: hypothetical protein [Homo sapiens]
(164 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169210237 PREDICTED: hypothetical protein [Homo sapiens] 338 2e-93
gi|169168737 PREDICTED: hypothetical protein [Homo sapiens] 338 2e-93
gi|169210128 PREDICTED: hypothetical protein [Homo sapiens] 338 2e-93
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 35 0.029
gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo ... 34 0.050
gi|239753497 PREDICTED: hypothetical protein [Homo sapiens] 31 0.55
gi|239755232 PREDICTED: hypothetical protein [Homo sapiens] 30 0.72
gi|239749768 PREDICTED: hypothetical protein [Homo sapiens] 30 0.72
gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo ... 30 0.72
gi|91208420 bassoon protein [Homo sapiens] 30 0.72
gi|189011568 adenomatous polyposis coli [Homo sapiens] 30 1.2
gi|189011566 adenomatous polyposis coli [Homo sapiens] 30 1.2
gi|53759122 adenomatous polyposis coli [Homo sapiens] 30 1.2
gi|222537754 hypothetical protein LOC375337 [Homo sapiens] 29 1.6
gi|93204873 G protein-coupled receptor 157 [Homo sapiens] 29 1.6
gi|60097902 filaggrin [Homo sapiens] 28 2.7
gi|47551356 hypothetical protein LOC408029 [Homo sapiens] 28 2.7
gi|47524184 hypothetical protein LOC29798 [Homo sapiens] 28 2.7
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 28 2.7
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 28 2.7
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 28 2.7
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 28 2.7
gi|19923343 Cbp/p300-interacting transactivator, with Glu/Asp-ri... 28 3.6
gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens] 28 3.6
gi|239752871 PREDICTED: hypothetical protein [Homo sapiens] 28 3.6
gi|169160757 PREDICTED: hypothetical protein [Homo sapiens] 28 3.6
gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo ... 28 3.6
gi|239747423 PREDICTED: hypothetical protein XP_002346701 [Homo ... 28 3.6
gi|113412190 PREDICTED: hypothetical protein [Homo sapiens] 28 3.6
gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo ... 28 3.6
>gi|169210237 PREDICTED: hypothetical protein [Homo sapiens]
Length = 164
Score = 338 bits (866), Expect = 2e-93
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MAHAYVLQAEARARVRSLCSGRRTSASAGYRGVPEGERVDTVRIYSTADHFVLAATSPAR 60
MAHAYVLQAEARARVRSLCSGRRTSASAGYRGVPEGERVDTVRIYSTADHFVLAATSPAR
Sbjct: 1 MAHAYVLQAEARARVRSLCSGRRTSASAGYRGVPEGERVDTVRIYSTADHFVLAATSPAR 60
Query: 61 AAPAASMLEAVPSDFPPTASLLLFFSLTALISCFCSSSLSQWGTWHYRDSENPQMWGVLQ 120
AAPAASMLEAVPSDFPPTASLLLFFSLTALISCFCSSSLSQWGTWHYRDSENPQMWGVLQ
Sbjct: 61 AAPAASMLEAVPSDFPPTASLLLFFSLTALISCFCSSSLSQWGTWHYRDSENPQMWGVLQ 120
Query: 121 HPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR 164
HPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR
Sbjct: 121 HPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR 164
>gi|169168737 PREDICTED: hypothetical protein [Homo sapiens]
Length = 164
Score = 338 bits (866), Expect = 2e-93
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MAHAYVLQAEARARVRSLCSGRRTSASAGYRGVPEGERVDTVRIYSTADHFVLAATSPAR 60
MAHAYVLQAEARARVRSLCSGRRTSASAGYRGVPEGERVDTVRIYSTADHFVLAATSPAR
Sbjct: 1 MAHAYVLQAEARARVRSLCSGRRTSASAGYRGVPEGERVDTVRIYSTADHFVLAATSPAR 60
Query: 61 AAPAASMLEAVPSDFPPTASLLLFFSLTALISCFCSSSLSQWGTWHYRDSENPQMWGVLQ 120
AAPAASMLEAVPSDFPPTASLLLFFSLTALISCFCSSSLSQWGTWHYRDSENPQMWGVLQ
Sbjct: 61 AAPAASMLEAVPSDFPPTASLLLFFSLTALISCFCSSSLSQWGTWHYRDSENPQMWGVLQ 120
Query: 121 HPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR 164
HPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR
Sbjct: 121 HPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR 164
>gi|169210128 PREDICTED: hypothetical protein [Homo sapiens]
Length = 164
Score = 338 bits (866), Expect = 2e-93
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MAHAYVLQAEARARVRSLCSGRRTSASAGYRGVPEGERVDTVRIYSTADHFVLAATSPAR 60
MAHAYVLQAEARARVRSLCSGRRTSASAGYRGVPEGERVDTVRIYSTADHFVLAATSPAR
Sbjct: 1 MAHAYVLQAEARARVRSLCSGRRTSASAGYRGVPEGERVDTVRIYSTADHFVLAATSPAR 60
Query: 61 AAPAASMLEAVPSDFPPTASLLLFFSLTALISCFCSSSLSQWGTWHYRDSENPQMWGVLQ 120
AAPAASMLEAVPSDFPPTASLLLFFSLTALISCFCSSSLSQWGTWHYRDSENPQMWGVLQ
Sbjct: 61 AAPAASMLEAVPSDFPPTASLLLFFSLTALISCFCSSSLSQWGTWHYRDSENPQMWGVLQ 120
Query: 121 HPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR 164
HPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR
Sbjct: 121 HPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR 164
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 35.0 bits (79), Expect = 0.029
Identities = 42/143 (29%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 31 RGVPEG--ERVDTVRIYSTADHFVLAATSPARAAPAASMLEAVPSDFPPTASLLLFFSLT 88
R P G R ++ STA + P+ A+P + A S P TASL+
Sbjct: 253 RASPTGMLSRTSLTKMDSTAS-ITRTPSRPSTASPTGTPSRASLSMTPSTASLMRMLPRA 311
Query: 89 ALISCFCSSSLSQWGTWHYRDSENPQMWGVLQHPGRHAGSQRGKSSEAS------RRNGT 142
+ +SL++ + S P + + P R S GK S AS R + T
Sbjct: 312 SPTGMLSRTSLTKMDSTA-SISRTPPRASITRTPSR--ASPTGKPSTASPTGTPSRASPT 368
Query: 143 G-PSTAGRSGAPSGGCRPHTPPR 164
G PSTA +G S TPPR
Sbjct: 369 GSPSTASLTGLSSTASPTGTPPR 391
Score = 28.9 bits (63), Expect = 2.1
Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 27/151 (17%)
Query: 17 SLCSGRRTSASAGYRGVPEGERVDTVRIYSTADHFVLAATSP-----ARAAPAASMLEAV 71
S S RT A G+P R + STA + +T+ +RA+P + A
Sbjct: 171 STASLTRTPPRASPTGMPS--RTSPTGMPSTASLTKMDSTASITRTLSRASPTGTPPRAS 228
Query: 72 PSDFPPTASLLLFFSLTALISCFCSSSLSQWGTWHYRDSENPQMWGVLQHPGRHAGSQRG 131
P+ PP ASL + S LI R G+L +
Sbjct: 229 PTGSPPRASLSMMPSTALLI----------------RTPPRASPTGMLS----RTSLTKM 268
Query: 132 KSSEASRRNGTGPSTAGRSGAPSGGCRPHTP 162
S+ + R + PSTA +G PS TP
Sbjct: 269 DSTASITRTPSRPSTASPTGTPSRASLSMTP 299
>gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo
sapiens]
Length = 239
Score = 34.3 bits (77), Expect = 0.050
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 117 GVLQHPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR 164
GV P RH+ + R + + +R G GPS G +G PSG R R
Sbjct: 88 GVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGRSRSRVGAR 135
>gi|239753497 PREDICTED: hypothetical protein [Homo sapiens]
Length = 163
Score = 30.8 bits (68), Expect = 0.55
Identities = 25/70 (35%), Positives = 28/70 (40%), Gaps = 17/70 (24%)
Query: 110 SENPQMWGVLQHPGRHAGSQRGKSSEASRRNGTGPSTAG--------RSGAPSG------ 155
SE P W +QHPGR A S + +R GP AG R G P
Sbjct: 28 SEVPFSW--IQHPGRSAWSAFPRGLPWNRPGTRGPLAAGLFPEPQLARQGLPGRAAGKRR 85
Query: 156 -GCRPHTPPR 164
G RPH PR
Sbjct: 86 VGGRPHPSPR 95
>gi|239755232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 501
Score = 30.4 bits (67), Expect = 0.72
Identities = 17/57 (29%), Positives = 22/57 (38%)
Query: 108 RDSENPQMWGVLQHPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR 164
R E +W + R GS R + S +G G + AG G RP P R
Sbjct: 382 RGQEAHSLWPLQPRARRQGGSDRHRRRGQSGASGLGTAAAGAERTSPVGARPPPPAR 438
>gi|239749768 PREDICTED: hypothetical protein [Homo sapiens]
Length = 591
Score = 30.4 bits (67), Expect = 0.72
Identities = 17/57 (29%), Positives = 22/57 (38%)
Query: 108 RDSENPQMWGVLQHPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR 164
R E +W + R GS R + S +G G + AG G RP P R
Sbjct: 472 RGQEAHSLWPLQPRARRQGGSDRHRRRGQSGASGLGTAAAGAERTSPVGARPPPPAR 528
>gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo
sapiens]
Length = 591
Score = 30.4 bits (67), Expect = 0.72
Identities = 17/57 (29%), Positives = 22/57 (38%)
Query: 108 RDSENPQMWGVLQHPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR 164
R E +W + R GS R + S +G G + AG G RP P R
Sbjct: 472 RGQEAHSLWPLQPRARRQGGSDRHRRRGQSGASGLGTAAAGAERTSPVGARPPPPAR 528
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 30.4 bits (67), Expect = 0.72
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 12/69 (17%)
Query: 107 YRDSENPQMWGVLQH----PGRHAGSQRGKSSEASRRNG--TGPSTAGRSGAPSG----- 155
Y D + P G+ H PGRHA ++ + + R +G TG R+ P
Sbjct: 3617 YHDYDEPPEEGLWPHDEGGPGRHASAKEHRHGDHGRHSGRHTGEEPGRRAAKPHARDLGR 3676
Query: 156 -GCRPHTPP 163
RPH+ P
Sbjct: 3677 HEARPHSQP 3685
>gi|189011568 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 29.6 bits (65), Expect = 1.2
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 108 RDSENP--QMWGVLQHPGRHAGSQRGKS--SEASRRNGTGPSTAGRSGAPSGGCRPHTPP 163
R +E+P ++ V QHP + +G S SE++R S+ +S + SG P +PP
Sbjct: 1314 RSAEDPVSEVPAVSQHPRTKSSRLQGSSLSSESARHKAVEFSSGAKSPSKSGAQTPKSPP 1373
>gi|189011566 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 29.6 bits (65), Expect = 1.2
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 108 RDSENP--QMWGVLQHPGRHAGSQRGKS--SEASRRNGTGPSTAGRSGAPSGGCRPHTPP 163
R +E+P ++ V QHP + +G S SE++R S+ +S + SG P +PP
Sbjct: 1314 RSAEDPVSEVPAVSQHPRTKSSRLQGSSLSSESARHKAVEFSSGAKSPSKSGAQTPKSPP 1373
>gi|53759122 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 29.6 bits (65), Expect = 1.2
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 108 RDSENP--QMWGVLQHPGRHAGSQRGKS--SEASRRNGTGPSTAGRSGAPSGGCRPHTPP 163
R +E+P ++ V QHP + +G S SE++R S+ +S + SG P +PP
Sbjct: 1314 RSAEDPVSEVPAVSQHPRTKSSRLQGSSLSSESARHKAVEFSSGAKSPSKSGAQTPKSPP 1373
>gi|222537754 hypothetical protein LOC375337 [Homo sapiens]
Length = 1692
Score = 29.3 bits (64), Expect = 1.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Query: 126 AGSQRGKSSEASRRNGTGPSTAGRSGAPSGGCRPHTPPR 164
A G +R GP AG G +GGCR + R
Sbjct: 12 ASGPEGNVRNLQKRQAPGPGAAGGCGPEAGGCRENKQKR 50
>gi|93204873 G protein-coupled receptor 157 [Homo sapiens]
Length = 335
Score = 29.3 bits (64), Expect = 1.6
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 22/113 (19%)
Query: 42 VRIYSTADHFVLAATSPARAAPAASMLEAVPSDFPPTASLLLFFSLT--------ALISC 93
+R++ST + SPA P +L + + F A+ ++F T +L C
Sbjct: 237 LRVWSTVRFVLTLCGSPAVQTPVLVVLHGIGNTFQGGANCIMFVLCTRAVRTRLFSLCCC 296
Query: 94 FCSSSLSQWGTWHYRDSENPQMWGVLQHPGRHAGSQRGKSSEASRRNGTGPST 146
CSS P P A S+ G+S E+ G PST
Sbjct: 297 CCSS--------------QPPTKSPAGTPKAPAPSKPGESQESQGTPGELPST 335
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 28.5 bits (62), Expect = 2.7
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 96 SSSLSQWGTWHYRDSENPQMWGVLQH------PGRHAGSQRGKSSEASRRNGTGPSTAGR 149
+ S Q GT H S + Q V H PG GS+ +S+++SR +G G A
Sbjct: 1323 ADSSRQSGTHHTESSSHGQ--AVSSHEQARSSPGERHGSRHQQSADSSRHSGIGHRQASS 1380
Query: 150 SGAPSG 155
+ SG
Sbjct: 1381 AVRDSG 1386
Score = 26.9 bits (58), Expect = 7.9
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 18/50 (36%)
Query: 121 HPGRHAGSQRGKSSEASRRNG------------------TGPSTAGRSGA 152
H H S RG+S E S +G TGPST GR G+
Sbjct: 2716 HQQSHQESARGRSGETSGHSGSFLYQVSTHEQSESSHGWTGPSTRGRQGS 2765
Score = 26.9 bits (58), Expect = 7.9
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 18/50 (36%)
Query: 121 HPGRHAGSQRGKSSEASRRNG------------------TGPSTAGRSGA 152
H H S RG+S E S +G TGPST GR G+
Sbjct: 3040 HQQSHQESARGRSGETSGHSGSFLYQVSTHEQSESSHGWTGPSTRGRQGS 3089
>gi|47551356 hypothetical protein LOC408029 [Homo sapiens]
Length = 209
Score = 28.5 bits (62), Expect = 2.7
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 95 CSSSLSQWGTWHYRDSENPQMWGVLQHPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPS 154
CS S +QW W R +W L H G+ + S + G + AG P+
Sbjct: 112 CSQSWAQWKLWRQRPGF--AIWAPLPH---WRGTSLIQQSSSPAAEGPAATAAGAVCLPA 166
Query: 155 GG 156
GG
Sbjct: 167 GG 168
>gi|47524184 hypothetical protein LOC29798 [Homo sapiens]
Length = 203
Score = 28.5 bits (62), Expect = 2.7
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 95 CSSSLSQWGTWHYRDSENPQMWGVLQHPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPS 154
CS S +QW W R +W L H G+ + S + G + AG P+
Sbjct: 106 CSQSWAQWKLWRQRPGF--AIWAPLPH---WRGTSLIQQSSSPAAEGPAATAAGAVCLPA 160
Query: 155 GG 156
GG
Sbjct: 161 GG 162
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein
[Homo sapiens]
Length = 1650
Score = 28.5 bits (62), Expect = 2.7
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 9/42 (21%)
Query: 131 GKSSEASRRNGTGP-------STAGRSGAP--SGGCRPHTPP 163
GKS R TGP G+SGA SGG PH PP
Sbjct: 746 GKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPP 787
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein
[Homo sapiens]
Length = 1629
Score = 28.5 bits (62), Expect = 2.7
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 9/42 (21%)
Query: 131 GKSSEASRRNGTGP-------STAGRSGAP--SGGCRPHTPP 163
GKS R TGP G+SGA SGG PH PP
Sbjct: 725 GKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPP 766
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein
[Homo sapiens]
Length = 1736
Score = 28.5 bits (62), Expect = 2.7
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 9/42 (21%)
Query: 131 GKSSEASRRNGTGP-------STAGRSGAP--SGGCRPHTPP 163
GKS R TGP G+SGA SGG PH PP
Sbjct: 832 GKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPP 873
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 28.5 bits (62), Expect = 2.7
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 17/81 (20%)
Query: 96 SSSLSQWGTWHYRDSENPQMWGVLQHPGRHAGSQ--------RGKSSEASRRNGTGPSTA 147
S S +WG S +PQ G + P R S+ R +S+ R + P+T
Sbjct: 516 SRSAQRWGR-----SRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATR 570
Query: 148 GRS----GAPSGGCRPHTPPR 164
GRS A G R TP R
Sbjct: 571 GRSRSRTPARRGRSRSRTPAR 591
>gi|19923343 Cbp/p300-interacting transactivator, with Glu/Asp-rich
carboxy-terminal domain, 2 [Homo sapiens]
Length = 270
Score = 28.1 bits (61), Expect = 3.6
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 106 HYRDSENPQMWGVLQHPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPSG 155
H+RD NP+ G PG GS S +S G G S +G G+ SG
Sbjct: 152 HFRDC-NPKHSGGSSTPGGSGGSSTPGGSGSSSGGGAGSSNSG-GGSGSG 199
>gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens]
Length = 1950
Score = 28.1 bits (61), Expect = 3.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 133 SSEASRRNGTGPSTAGRSGAPS 154
SSE+S+ TGPS G++GA S
Sbjct: 1659 SSESSKSGTTGPSVGGKTGATS 1680
>gi|239752871 PREDICTED: hypothetical protein [Homo sapiens]
Length = 92
Score = 28.1 bits (61), Expect = 3.6
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 113 PQMWGVLQHPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPS-GGCRP 159
PQ G + G A Q G+ + RR G R G PS GG RP
Sbjct: 21 PQCPGSHREAGGEAAGQAGRIFPSRRRRRRGRYHGDRGGRPSFGGSRP 68
>gi|169160757 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 28.1 bits (61), Expect = 3.6
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 117 GVLQHPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPS--GGCRPHTPP 163
G+LQ P ++G + + E R P +AG G+PS GG P PP
Sbjct: 70 GLLQAPD-NSGHEEEQEGERGAREKGQPRSAGLYGSPSRGGGRVPKEPP 117
>gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo
sapiens]
Length = 2134
Score = 28.1 bits (61), Expect = 3.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 133 SSEASRRNGTGPSTAGRSGAPS 154
SSE+S+ TGPS G++GA S
Sbjct: 1843 SSESSKSGTTGPSVGGKTGATS 1864
>gi|239747423 PREDICTED: hypothetical protein XP_002346701 [Homo
sapiens]
Length = 92
Score = 28.1 bits (61), Expect = 3.6
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 113 PQMWGVLQHPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPS-GGCRP 159
PQ G + G A Q G+ + RR G R G PS GG RP
Sbjct: 21 PQCPGSHREAGGEAAGQAGRIFPSRRRRRRGRYHGDRGGRPSFGGSRP 68
>gi|113412190 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 28.1 bits (61), Expect = 3.6
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 117 GVLQHPGRHAGSQRGKSSEASRRNGTGPSTAGRSGAPS--GGCRPHTPP 163
G+LQ P ++G + + E R P +AG G+PS GG P PP
Sbjct: 70 GLLQAPD-NSGHEEEQEGERGAREKGQPRSAGLYGSPSRGGGRVPKEPP 117
>gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo
sapiens]
Length = 2134
Score = 28.1 bits (61), Expect = 3.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 133 SSEASRRNGTGPSTAGRSGAPS 154
SSE+S+ TGPS G++GA S
Sbjct: 1843 SSESSKSGTTGPSVGGKTGATS 1864
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.128 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,322,976
Number of Sequences: 37866
Number of extensions: 342998
Number of successful extensions: 2065
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1996
Number of HSP's gapped (non-prelim): 115
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.