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Search of human proteins with 169168458
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169168458 PREDICTED: hypothetical protein [Homo sapiens]
(353 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169168458 PREDICTED: hypothetical protein [Homo sapiens] 739 0.0
gi|239742749 PREDICTED: hypothetical protein XP_002342626 [Homo ... 459 e-129
gi|214831495 hypothetical protein LOC285679 [Homo sapiens] 422 e-118
gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens] 169 3e-42
gi|239743732 PREDICTED: family with sequence similarity 75, memb... 89 6e-18
gi|91206406 hypothetical protein LOC642265 [Homo sapiens] 77 2e-14
gi|133892686 hypothetical protein LOC727830 [Homo sapiens] 77 2e-14
gi|165377334 hypothetical protein LOC727905 [Homo sapiens] 77 3e-14
gi|223633941 hypothetical protein LOC389730 [Homo sapiens] 76 4e-14
gi|153791826 hypothetical protein LOC26165 [Homo sapiens] 76 4e-14
gi|146231958 hypothetical protein LOC647060 [Homo sapiens] 76 5e-14
gi|223468617 family with sequence similarity 75, member C1 [Homo... 66 4e-11
gi|169174618 PREDICTED: family with sequence similarity 75, memb... 62 6e-10
gi|237820622 pleckstrin homology domain containing, family N mem... 49 7e-06
gi|237820624 pleckstrin homology domain containing, family N mem... 48 2e-05
gi|146134388 YLP motif containing 1 [Homo sapiens] 48 2e-05
gi|54860079 nadrin isoform 1 [Homo sapiens] 47 2e-05
gi|54860105 nadrin isoform 2 [Homo sapiens] 47 2e-05
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 47 2e-05
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 47 3e-05
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 45 1e-04
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 45 1e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 44 2e-04
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 44 2e-04
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 44 3e-04
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 44 3e-04
gi|15529996 son of sevenless homolog 1 [Homo sapiens] 44 3e-04
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 44 3e-04
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 44 3e-04
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 44 3e-04
>gi|169168458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 353
Score = 739 bits (1907), Expect = 0.0
Identities = 353/353 (100%), Positives = 353/353 (100%)
Query: 1 MPRAQLPEDSSAVDMDILFPLHSVIETELCPSSIPQIIHFVLFVVFSLVILIILCPYIPR 60
MPRAQLPEDSSAVDMDILFPLHSVIETELCPSSIPQIIHFVLFVVFSLVILIILCPYIPR
Sbjct: 1 MPRAQLPEDSSAVDMDILFPLHSVIETELCPSSIPQIIHFVLFVVFSLVILIILCPYIPR 60
Query: 61 EPSSVPPREEDSENDQAEVGEWLRIGNKYITLKDCRILLKELENLEVYTFLLEKRLKKLS 120
EPSSVPPREEDSENDQAEVGEWLRIGNKYITLKDCRILLKELENLEVYTFLLEKRLKKLS
Sbjct: 61 EPSSVPPREEDSENDQAEVGEWLRIGNKYITLKDCRILLKELENLEVYTFLLEKRLKKLS 120
Query: 121 REGSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPK 180
REGSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPK
Sbjct: 121 REGSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPK 180
Query: 181 TSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPE 240
TSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPE
Sbjct: 181 TSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPE 240
Query: 241 PLRPLKHPSHKPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWVP 300
PLRPLKHPSHKPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWVP
Sbjct: 241 PLRPLKHPSHKPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWVP 300
Query: 301 SSPRVIRGVGRCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLPTHLPKASF 353
SSPRVIRGVGRCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLPTHLPKASF
Sbjct: 301 SSPRVIRGVGRCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLPTHLPKASF 353
>gi|239742749 PREDICTED: hypothetical protein XP_002342626 [Homo
sapiens]
Length = 277
Score = 459 bits (1180), Expect = e-129
Identities = 226/228 (99%), Positives = 227/228 (99%)
Query: 1 MPRAQLPEDSSAVDMDILFPLHSVIETELCPSSIPQIIHFVLFVVFSLVILIILCPYIPR 60
MPRAQLPEDSSAVDMDILFPLHSVIETELCPS IPQIIHFVLF+VFSLVILIILCPYIPR
Sbjct: 1 MPRAQLPEDSSAVDMDILFPLHSVIETELCPSPIPQIIHFVLFIVFSLVILIILCPYIPR 60
Query: 61 EPSSVPPREEDSENDQAEVGEWLRIGNKYITLKDCRILLKELENLEVYTFLLEKRLKKLS 120
EPSSVPPREEDSENDQAEVGEWLRIGNKYITLKDCRILLKELENLEVYTFLLEKRLKKLS
Sbjct: 61 EPSSVPPREEDSENDQAEVGEWLRIGNKYITLKDCRILLKELENLEVYTFLLEKRLKKLS 120
Query: 121 REGSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPK 180
REGSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPK
Sbjct: 121 REGSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPK 180
Query: 181 TSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLG 228
TSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLG
Sbjct: 181 TSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLG 228
>gi|214831495 hypothetical protein LOC285679 [Homo sapiens]
Length = 277
Score = 422 bits (1084), Expect = e-118
Identities = 212/228 (92%), Positives = 217/228 (95%)
Query: 1 MPRAQLPEDSSAVDMDILFPLHSVIETELCPSSIPQIIHFVLFVVFSLVILIILCPYIPR 60
MPRAQLPEDSSAVDMDILFPL SVI TELCPS IPQIIHFVLFVVFSLVILIIL YIPR
Sbjct: 1 MPRAQLPEDSSAVDMDILFPLDSVIGTELCPSPIPQIIHFVLFVVFSLVILIILRLYIPR 60
Query: 61 EPSSVPPREEDSENDQAEVGEWLRIGNKYITLKDCRILLKELENLEVYTFLLEKRLKKLS 120
EPSSVPPREEDSENDQAEVGEWLRIGNKYITLKD RILLKELENLE+YTFL +K LKKLS
Sbjct: 61 EPSSVPPREEDSENDQAEVGEWLRIGNKYITLKDYRILLKELENLEIYTFLSKKCLKKLS 120
Query: 121 REGSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPK 180
REGSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAP APLASMPSSVPK
Sbjct: 121 REGSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPLAPLASMPSSVPK 180
Query: 181 TSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLG 228
TS+ESLGSPSSLSSS+ EPLCPLKHPSH+PPASTLSPNPTSSTESLG
Sbjct: 181 TSVESLGSPSSLSSSKPREPLCPLKHPSHQPPASTLSPNPTSSTESLG 228
>gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens]
Length = 1445
Score = 169 bits (428), Expect = 3e-42
Identities = 129/358 (36%), Positives = 170/358 (47%), Gaps = 52/358 (14%)
Query: 2 PRAQLPEDSSAVDMD-ILFPLHSVIETELCPSSIPQIIHFVLFVVFSLVILIILCPYIPR 60
P + D A+ M+ +LFPL S T L PSS P ++ F+L V LV+L +L Y+
Sbjct: 29 PSVECTGDDIALQMEKMLFPLKSPSATWLSPSSTPWMMDFILTSVCGLVLLFLLLLYVHS 88
Query: 61 EPSSVPPREEDSENDQAEVGEWLRIGNKYITLKDCRILLKELENLEVYTFLLEKRLKKLS 120
+P S PP + S + K LK CRILL+ELE +LLE L+KL+
Sbjct: 89 DPPSPPPGRKRSSREPQRERSGRSRSRKISALKACRILLRELEETRDLNYLLESHLRKLA 148
Query: 121 REGSSHHLPRQVRP-GPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVP 179
EGSSH LP P G V KP PA+ H+P G + P+ +SP APPAPLA
Sbjct: 149 GEGSSH-LPLGGDPLGDVCKPVPAKAHQPHG-KCMQDPSPASLSPPAPPAPLA------- 199
Query: 180 KTSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPP 239
STLSP P + +E G S+LS+S PP
Sbjct: 200 ----------------------------------STLSPGPMTFSEPFGPHSTLSASGPP 225
Query: 240 EPLRPLKHPSHKPHGRSPPRRRNPGWVSWS----DSMQADSETDAIICPMCKAPERSCPH 295
EPL PLK P+ +PH PP + G ++ S DS A + + CP+ P+ S H
Sbjct: 226 EPLLPLKCPATQPHVVFPPSPQPHGPLASSPPPPDSSLAGLQCGSTTCPV---PQSSPLH 282
Query: 296 TWWVPSSPRVIRGVGRCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLPTHLPKASF 353
+P RVI G+G SDP L +EAA W T S + +LP H +ASF
Sbjct: 283 NQVLPPPTRVISGLGCSSDPIWDLYCWREAATTWGLSTYSHGKSQPRHLPDHTSEASF 340
Score = 34.3 bits (77), Expect = 0.17
Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 13/99 (13%)
Query: 216 LSPNPTSSTESLGYLSSLSSSQPPEP----LRPLKHPSHKPHGRSPPRRRNPGWVSWSDS 271
+S NP+S L S+S P EP L +PH + P+ P W
Sbjct: 457 VSRNPSSQNAHSVPLDKASTSLPGEPEVEASSQLSQAPPQPHHMAQPQHFTPAWPQSQPP 516
Query: 272 MQADSETDAIICPMCKAPERSCPHTWWVPSSPRVIRGVG 310
A+ +T A + P P C SSP IRG G
Sbjct: 517 PLAEIQTQAHLSP--PVPSLGC-------SSPPQIRGCG 546
>gi|239743732 PREDICTED: family with sequence similarity 75, member
A4 isoform 1 [Homo sapiens]
Length = 1361
Score = 89.0 bits (219), Expect = 6e-18
Identities = 106/359 (29%), Positives = 148/359 (41%), Gaps = 46/359 (12%)
Query: 1 MPRAQLPEDSSAVDMDIL-FPLHSVIETEL-CPSSIPQIIHFVLFVVFSLVILIILCPYI 58
MPRAQL E ++ + M+ L FPL + + L PSS P ++ L +VF+L +L PY+
Sbjct: 1 MPRAQLLESNAPIHMENLPFPLKLLSASSLNAPSSTPWVLDIFLTLVFALGFFFVLLPYL 60
Query: 59 PREPSSVPPREEDSENDQAEVGEWLRIGN--KYITLKDCRILLKELENLEVYTFLLEKRL 116
PP + + VG R K +L+ R + LE L+ L
Sbjct: 61 SYFRCDDPPSPSPGKR-KCPVGRRRRPRGRMKNHSLRAGRECRRGLEETSDLLSQLQSLL 119
Query: 117 KKLSREGSSHHLPRQVRPGPVYKPAP----ARNHRPRGGRGKASPTSFHVSPRAP-PAPL 171
+G L PG V + AP +H P P+A P L
Sbjct: 120 GPHLDKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPILSPLASPDPQAKHPQDL 179
Query: 172 ASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLS 231
AS PS P T+ S SSLS+SQ EP PL+HPS PPA L P+P + +
Sbjct: 180 ASTPSPGPMTT-----SVSSLSASQPPEPSLPLEHPSPEPPA--LFPHPPHTPD------ 226
Query: 232 SLSSSQPPEPLRPLKHPSHKPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPER 291
L+ S PP P G + P R+ ++ S D++ P+ P+
Sbjct: 227 PLACSLPP------------PKGFTAPPLRD-------STLITPSHCDSVAFPLGTVPQS 267
Query: 292 SCPHTWWVPSSPRVIRGVGRCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLPTHLPK 350
PH V S P I G+G + S QE AR C SS + +L H P+
Sbjct: 268 LSPHEDLVASVP-AISGLGGSNSHVSASSRWQETARTSCAFNSS---VQQDHLSRHPPE 322
>gi|91206406 hypothetical protein LOC642265 [Homo sapiens]
Length = 1347
Score = 77.0 bits (188), Expect = 2e-14
Identities = 98/343 (28%), Positives = 139/343 (40%), Gaps = 51/343 (14%)
Query: 19 FPLHSVIETEL-CPSSIPQIIHFVLFVVFSLVILIILCPYIPREPSSVPPREEDSENDQA 77
FPL + + L PSS P ++ L +VF+L +L PY+ PP + +
Sbjct: 6 FPLKLLSASSLNAPSSTPWVLDIFLTLVFALGFFFLLLPYLSYFRCDDPPSPSPGKR-KC 64
Query: 78 EVGEWL----RIGNKYITL-KDCRILLKELENLEVYTFLLEKRLKKLSREGSSHHLPRQV 132
VG R+ N + ++CR L+E +L L+ L +G L
Sbjct: 65 PVGRRRRPRGRMKNHSLRAGRECRRGLQETSDL---LSQLQSLLGPHLDKGDFGQLSGPD 121
Query: 133 RPGPVYKPAP----ARNHRPRGGRGKASPTSFHVSPRAP-PAPLASMPSSVPKTSIESLG 187
PG V + AP +H P P+A P LAS PS P T+
Sbjct: 122 PPGEVGERAPDGASQSSHEPMEDAAPILSPLASPDPQAKHPQDLASTPSPGPMTT----- 176
Query: 188 SPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKH 247
S SSLS+SQ EP PL+HPS PPA L P+P + + L+ S PP
Sbjct: 177 SVSSLSASQPPEPSLPLEHPSPEPPA--LFPHPPHTPD------PLACSPPP-------- 220
Query: 248 PSHKPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWVPSSPRVIR 307
P G + P R+ ++ S D++ P+ P+ PH V S P I
Sbjct: 221 ----PKGFTAPPLRD-------STLITPSHCDSVALPLGTVPQSLSPHEDLVASVP-AIS 268
Query: 308 GVGRCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLPTHLPK 350
G+G + S QE AR C SS + +L H P+
Sbjct: 269 GLGGSNSHVSASSRWQETARTSCAFNSS---VQQDHLSRHPPE 308
>gi|133892686 hypothetical protein LOC727830 [Homo sapiens]
Length = 1347
Score = 77.0 bits (188), Expect = 2e-14
Identities = 97/340 (28%), Positives = 135/340 (39%), Gaps = 45/340 (13%)
Query: 19 FPLHSVIETEL-CPSSIPQIIHFVLFVVFSLVILIILCPYIPREPSSVPPREEDSENDQA 77
FPL + + L PSS P ++ L +VF+L +L PY+ PP + +
Sbjct: 6 FPLKLLSASSLNAPSSTPWVLDIFLTLVFALGFFFLLLPYLSYFRCDDPPSPSPGKR-KC 64
Query: 78 EVGEWLRIGN--KYITLKDCRILLKELENLEVYTFLLEKRLKKLSREGSSHHLPRQVRPG 135
VG R K +L+ R + LE L+ L +G L PG
Sbjct: 65 PVGRRRRPRGRMKNHSLRAGRECRRGLEETSDLLSQLQSLLGPHLDKGDFGQLSGPDPPG 124
Query: 136 PVYKPAP----ARNHRPRGGRGKASPTSFHVSPRAP-PAPLASMPSSVPKTSIESLGSPS 190
V + AP +H P P+A P LAS PS P T+ S S
Sbjct: 125 EVGERAPDGASQSSHEPMEDAAPILSLLASPDPQAKHPQDLASTPSPGPMTT-----SVS 179
Query: 191 SLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKHPSH 250
SLS+SQ EP PL+HPS PPA L P+P + + L+ S PP
Sbjct: 180 SLSASQPPEPSLPLEHPSPEPPA--LFPHPPHTPD------PLACSLPP----------- 220
Query: 251 KPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWVPSSPRVIRGVG 310
P G + P R+ ++ S D++ P+ P+ PH V S P I G+G
Sbjct: 221 -PKGFTAPPLRD-------STLITPSHCDSVALPLGTVPQSLSPHEDLVASVP-AISGLG 271
Query: 311 RCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLPTHLPK 350
+ S QE AR C SS + +L H P+
Sbjct: 272 GSNSHVSASSRWQETARTSCAFNSS---VQQDHLSRHPPE 308
>gi|165377334 hypothetical protein LOC727905 [Homo sapiens]
Length = 1347
Score = 76.6 bits (187), Expect = 3e-14
Identities = 97/340 (28%), Positives = 135/340 (39%), Gaps = 45/340 (13%)
Query: 19 FPLHSVIETEL-CPSSIPQIIHFVLFVVFSLVILIILCPYIPREPSSVPPREEDSENDQA 77
FPL + + L PSS P ++ L +VF+L +L PY+ PP + +
Sbjct: 6 FPLKLLSASSLNAPSSTPWVLDIFLTLVFALGFFFLLLPYLSYFRCDDPPSPSPGKR-KC 64
Query: 78 EVGEWLRIGN--KYITLKDCRILLKELENLEVYTFLLEKRLKKLSREGSSHHLPRQVRPG 135
VG R K +L+ R + LE L+ L +G L PG
Sbjct: 65 PVGRRRRPRGRMKNHSLRAGRECRRGLEETSDLLSQLQSLLGPHLDKGDFGQLSGPDPPG 124
Query: 136 PVYKPAP----ARNHRPRGGRGKASPTSFHVSPRAP-PAPLASMPSSVPKTSIESLGSPS 190
V + AP +H P P+A P LAS PS P T+ S S
Sbjct: 125 EVGERAPDGASQSSHEPMEDAAPILSPLASPDPQAKHPQDLASTPSPGPMTT-----SVS 179
Query: 191 SLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKHPSH 250
SLS+SQ EP PL+HPS PPA L P+P + + L+ S PP
Sbjct: 180 SLSASQPPEPSLPLEHPSPEPPA--LFPHPPHTPD------PLACSLPP----------- 220
Query: 251 KPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWVPSSPRVIRGVG 310
P G + P R+ ++ S D++ P+ P+ PH V S P I G+G
Sbjct: 221 -PKGFTAPPLRD-------STLITPSHCDSVAFPLGTVPQSLSPHEDLVASVP-AISGLG 271
Query: 311 RCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLPTHLPK 350
+ S QE AR C SS + +L H P+
Sbjct: 272 GSNSHVSASSRWQETARTSCAFNSS---VQQDHLSRHPPE 308
>gi|223633941 hypothetical protein LOC389730 [Homo sapiens]
Length = 1343
Score = 76.3 bits (186), Expect = 4e-14
Identities = 94/325 (28%), Positives = 129/325 (39%), Gaps = 42/325 (12%)
Query: 19 FPLHSVIETEL-CPSSIPQIIHFVLFVVFSLVILIILCPYIPREPSSVPPREEDSENDQA 77
FPL + + L PSS P ++ L +VF+L +L PY+ PP + +
Sbjct: 6 FPLKLLSASSLNAPSSTPWVLDIFLTLVFALGFFFLLLPYLSYFHCDDPPSPSPGKR-KC 64
Query: 78 EVGEWLRIGN--KYITLKDCRILLKELENLEVYTFLLEKRLKKLSREGSSHHLPRQVRPG 135
VG R K +L+ R + LE L+ L +G L PG
Sbjct: 65 PVGRRRRPRGRMKNHSLRAGRECPRGLEETSDLLSQLQSLLGPHLDKGDFGQLSGPDPPG 124
Query: 136 PVYKPAP----ARNHRPRGGRGKASPTSFHVSPRAP-PAPLASMPSSVPKTSIESLGSPS 190
V + AP +H P P+A P LAS PS P T+ S S
Sbjct: 125 EVGERAPDGASQSSHEPMEDAAPILSPLASPDPQAKHPQDLASTPSPGPMTT-----SVS 179
Query: 191 SLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKHPSH 250
SLS+SQ EP PL+HPS PPA L P+P + + L+ S PP
Sbjct: 180 SLSASQPPEPSLPLEHPSPEPPA--LFPHPPHTPD------PLACSPPP----------- 220
Query: 251 KPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWVPSSPRVIRGVG 310
P G + P R+ ++ S D++ P+ P+ PH V S P I G+G
Sbjct: 221 -PKGFTAPPLRD-------STLITPSHCDSVALPLGTVPQSLSPHEDLVASVP-AISGLG 271
Query: 311 RCSDPNLGLSWRQEAARAWCHCTSS 335
+ S QE AR C SS
Sbjct: 272 GSNSHVSASSRWQETARTSCAFNSS 296
>gi|153791826 hypothetical protein LOC26165 [Homo sapiens]
Length = 1347
Score = 76.3 bits (186), Expect = 4e-14
Identities = 97/340 (28%), Positives = 135/340 (39%), Gaps = 45/340 (13%)
Query: 19 FPLHSVIETEL-CPSSIPQIIHFVLFVVFSLVILIILCPYIPREPSSVPPREEDSENDQA 77
FPL + + L PSS P ++ L +VF+L +L PY+ PP + +
Sbjct: 6 FPLKLLSASSLNAPSSTPWVLDIFLTLVFALGFFFLLLPYLSYFRCDDPPSPSPGKR-KC 64
Query: 78 EVGEWLRIGN--KYITLKDCRILLKELENLEVYTFLLEKRLKKLSREGSSHHLPRQVRPG 135
VG R K +L+ R + LE L+ L +G L PG
Sbjct: 65 PVGRRRRPRGRMKNHSLRAGRECPRGLEETSDLLSQLQSLLGPHLDKGDFGQLSGPDPPG 124
Query: 136 PVYKPAP----ARNHRPRGGRGKASPTSFHVSPRAP-PAPLASMPSSVPKTSIESLGSPS 190
V + AP +H P P+A P LAS PS P T+ S S
Sbjct: 125 EVGERAPDGASQSSHEPMEDAAPILSPLASPDPQAKHPQDLASTPSPGPMTT-----SVS 179
Query: 191 SLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKHPSH 250
SLS+SQ EP PL+HPS PPA L P+P + + L+ S PP
Sbjct: 180 SLSASQPPEPSLPLEHPSPEPPA--LFPHPPHTPD------PLACSLPP----------- 220
Query: 251 KPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWVPSSPRVIRGVG 310
P G + P R+ ++ S D++ P+ P+ PH V S P I G+G
Sbjct: 221 -PKGFTAPPLRD-------STLITPSHCDSVAFPLGTVPQSLSPHEDLVASVP-AISGLG 271
Query: 311 RCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLPTHLPK 350
+ S QE AR C SS + +L H P+
Sbjct: 272 GSNSHVSASSRWQETARTSCAFNSS---VQQDHLSRHPPE 308
>gi|146231958 hypothetical protein LOC647060 [Homo sapiens]
Length = 1347
Score = 75.9 bits (185), Expect = 5e-14
Identities = 96/340 (28%), Positives = 135/340 (39%), Gaps = 45/340 (13%)
Query: 19 FPLHSVIETEL-CPSSIPQIIHFVLFVVFSLVILIILCPYIPREPSSVPPREEDSENDQA 77
FPL + + L PSS P ++ L +VF+L +L PY+ PP + +
Sbjct: 6 FPLKLLSASSLNAPSSTPWVLDIFLTLVFALGFFFLLLPYLSYFRCDDPPSPSPGKR-KC 64
Query: 78 EVGEWLRIGN--KYITLKDCRILLKELENLEVYTFLLEKRLKKLSREGSSHHLPRQVRPG 135
VG R K +L+ R + L+ L+ L +G L PG
Sbjct: 65 PVGRRRRPRGRMKNHSLRAGRECPRGLQETSDLLSQLQSLLGPHLDKGDFGQLSGPDPPG 124
Query: 136 PVYKPAP----ARNHRPRGGRGKASPTSFHVSPRAP-PAPLASMPSSVPKTSIESLGSPS 190
V + AP +H P P+A P LAS PS P T+ S S
Sbjct: 125 EVGERAPDGASQSSHEPMEDAAPILSPLASPDPQAKHPQDLASTPSPGPMTT-----SVS 179
Query: 191 SLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKHPSH 250
SLS+SQ EP PL+HPS PPA L P+P + + L+ S PP
Sbjct: 180 SLSASQPPEPSLPLEHPSPEPPA--LFPHPPHTPD------PLACSPPP----------- 220
Query: 251 KPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWVPSSPRVIRGVG 310
P G + P R+ ++ S D++ P+ P+ PH V S P I G+G
Sbjct: 221 -PKGFTAPPLRD-------STLITPSHCDSVALPLGTVPQSLSPHEDLVASVP-AISGLG 271
Query: 311 RCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLPTHLPK 350
+ S QE AR C SS + +L H P+
Sbjct: 272 GSNSHVSASSRWQETARTSCAFNSS---VQQDHLSRHPPE 308
>gi|223468617 family with sequence similarity 75, member C1 [Homo
sapiens]
Length = 1188
Score = 66.2 bits (160), Expect = 4e-11
Identities = 87/344 (25%), Positives = 119/344 (34%), Gaps = 68/344 (19%)
Query: 19 FPLHSVIETEL-CPSSIPQIIHFVLFVVFSLVILIILCPYIP-----REPSSVPPREEDS 72
FPL + + L PSS P ++ L +VF+L + +L PY PS P + +
Sbjct: 6 FPLKLLSASSLNTPSSTPWVLDIFLTLVFALGLFFLLLPYFSYLRCDNPPSPSPRKRKRH 65
Query: 73 ENDQAEVGEWLRIGN--------KYITLKDCRILLKELENLEVYTFLLEKRLKKLSREGS 124
Q + G K +L+ CR + LE L+ L +G
Sbjct: 66 LVSQRHLVSQCPTGRRGRPRGRMKNHSLRACRECPRGLEETWDLLSQLQSLLGPHLEKGD 125
Query: 125 SHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAP-------LASMPSS 177
L PG V K P + R + VSP A P P LAS P
Sbjct: 126 FGQLSGPDPPGEVGKRTP--DGASRSSHEPMEDAAPIVSPLASPDPRTKHPQDLASTPPP 183
Query: 178 VPKT-SIESLGS-----PSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLS 231
P T S+ SL + PS L + EP HP H P SP P
Sbjct: 184 GPMTTSVSSLSASQPPEPSLLLERPSPEPPALFPHPPHTPDPLACSPPP----------- 232
Query: 232 SLSSSQPPEPLRPLKHPSHKPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPER 291
P G +PP R+ ++ S D++ P+ P+
Sbjct: 233 --------------------PKGFTPPPLRD-------STLLTPSHCDSVALPLDTVPQS 265
Query: 292 SCPHTWWVPSSPRVIRGVGRCSDPNLGLSWRQEAARAWCHCTSS 335
P S P I G+G + LSW QE + WC SS
Sbjct: 266 LSPREDLAASVP-AISGLGGSNSQVSALSWSQETTKTWCIFNSS 308
>gi|169174618 PREDICTED: family with sequence similarity 75, member
A4 isoform 2 [Homo sapiens]
Length = 1272
Score = 62.4 bits (150), Expect = 6e-10
Identities = 77/263 (29%), Positives = 106/263 (40%), Gaps = 44/263 (16%)
Query: 93 KDCRILLKELENLEVYTFLLEKRLKKLSREGSSHHLPRQVRPGPVYKPAP----ARNHRP 148
++CR L+E +L L+ L +G L PG V + AP +H P
Sbjct: 10 RECRRGLEETSDL---LSQLQSLLGPHLDKGDFGQLSGPDPPGEVGERAPDGASQSSHEP 66
Query: 149 RGGRGKASPTSFHVSPRAP-PAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHP 207
P+A P LAS PS P T+ S SSLS+SQ EP PL+HP
Sbjct: 67 MEDAAPILSPLASPDPQAKHPQDLASTPSPGPMTT-----SVSSLSASQPPEPSLPLEHP 121
Query: 208 SHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRSPPRRRNPGWVS 267
S PPA L P+P + + L+ S PP P G + P R+
Sbjct: 122 SPEPPA--LFPHPPHTPD------PLACSLPP------------PKGFTAPPLRD----- 156
Query: 268 WSDSMQADSETDAIICPMCKAPERSCPHTWWVPSSPRVIRGVGRCSDPNLGLSWRQEAAR 327
++ S D++ P+ P+ PH V S P I G+G + S QE AR
Sbjct: 157 --STLITPSHCDSVAFPLGTVPQSLSPHEDLVASVP-AISGLGGSNSHVSASSRWQETAR 213
Query: 328 AWCHCTSSQYPFEHPNLPTHLPK 350
C SS + +L H P+
Sbjct: 214 TSCAFNSS---VQQDHLSRHPPE 233
>gi|237820622 pleckstrin homology domain containing, family N member
1 isoform a [Homo sapiens]
Length = 611
Score = 48.9 bits (115), Expect = 7e-06
Identities = 55/205 (26%), Positives = 77/205 (37%), Gaps = 27/205 (13%)
Query: 102 LENLEVYTFLLEKRLKKLSREGSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFH 161
L+ +++ LE + H P P Y P + R RG S
Sbjct: 427 LDLTQLHRLSLESSPDAPDHTSETSHSPLYADP---YTPPATSHRRVTDVRGLEEFLSAM 483
Query: 162 VSPRAPP--APLASMPSSVPKTSIESLGS----PSSLSSSQASEPLCPLKHPSHRPPAST 215
S R P +PL S+P SVP + S S P LS A + + HR A
Sbjct: 484 QSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQR---HRGSAKD 540
Query: 216 LSPNPTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRSPPRRRNPGWVS-WSDSMQA 274
P P + + L S + PEP PL GRSP R R+PG+ W +++ +
Sbjct: 541 GGPQPPDAPQ----LVSSAREGSPEPWLPL------TDGRSPRRSRDPGYDHLWDETLSS 590
Query: 275 DSETDAIICPMCKAPERSCPHTWWV 299
+ CP PE S W+
Sbjct: 591 SHQK----CPQLGGPEASGGLVQWI 611
Score = 28.9 bits (63), Expect = 7.3
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Query: 124 SSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSI 183
SS H P Q R R G ++ + R P PL + + + S+
Sbjct: 379 SSQHTPDQANSDRA-SIGRRRTELRRSGSSRSPGSKARAEGRGPVTPLHLDLTQLHRLSL 437
Query: 184 ESL-GSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPL 242
ES +P S + S PL + PPA T T +LS++ S++ P P
Sbjct: 438 ESSPDAPDHTSETSHS----PLYADPYTPPA-TSHRRVTDVRGLEEFLSAMQSARGPTPS 492
Query: 243 RPL 245
PL
Sbjct: 493 SPL 495
>gi|237820624 pleckstrin homology domain containing, family N member
1 isoform b [Homo sapiens]
Length = 576
Score = 47.8 bits (112), Expect = 2e-05
Identities = 52/180 (28%), Positives = 69/180 (38%), Gaps = 27/180 (15%)
Query: 127 HLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPP--APLASMPSSVPKTSIE 184
H P P Y P + R RG S S R P +PL S+P SVP +
Sbjct: 417 HSPLYADP---YTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPR 473
Query: 185 SLGS----PSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPE 240
S S P LS A + + HR A P P + + L S + PE
Sbjct: 474 SCSSGPAGPYLLSKKGALQSRAAQR---HRGSAKDGGPQPPDAPQ----LVSSAREGSPE 526
Query: 241 PLRPLKHPSHKPHGRSPPRRRNPGWVS-WSDSMQADSETDAIICPMCKAPERSCPHTWWV 299
P PL GRSP R R+PG+ W +++ + + CP PE S W+
Sbjct: 527 PWLPL------TDGRSPRRSRDPGYDHLWDETLSSSHQK----CPQLGGPEASGGLVQWI 576
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 47.8 bits (112), Expect = 2e-05
Identities = 49/159 (30%), Positives = 61/159 (38%), Gaps = 15/159 (9%)
Query: 134 PGPVYKPAPARNHRPRGGRGKASPTSFHVS---PRAPPA-PLASMPSSVPKTSIESLGSP 189
P PV PA P G P S S P PP+ A P +P S+ S G P
Sbjct: 543 PPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPP 602
Query: 190 SSLS----SSQASEPLCPLKHPSHRPPASTLSPN-------PTSSTESLGYLSSLSSSQP 238
L SS A P+ PL S P + P P + + SS SSQ
Sbjct: 603 PVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQV 662
Query: 239 PEPLRPLKHPSHKPHGRSPPRRRNPGWVSWSDSMQADSE 277
PE RP P+ G +PP +P S S Q +S+
Sbjct: 663 PEKPRPALLPTPVSFGSAPPTTYHPPLQSAGPSEQVNSK 701
Score = 40.0 bits (92), Expect = 0.003
Identities = 41/129 (31%), Positives = 52/129 (40%), Gaps = 12/129 (9%)
Query: 146 HRPRGGRGKASPTSFHVSPRAPPAPLAS-MPSSVPKTSIESLGSPSSLSSSQASEPLCPL 204
H R G P P +PP P S MP S ++ + P S +S+P P
Sbjct: 129 HHQRDGPPGLVPMELESPPESPPVPPGSYMPPS--QSYMPPPQPPPSYYPPTSSQPYLPP 186
Query: 205 KHPS--HRPPA-STLSPNPT---SSTESLGYLSSLSSSQPPE---PLRPLKHPSHKPHGR 255
PS PP+ S L+P P+ SS+ S YLS S P P RP + S
Sbjct: 187 AQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLA 246
Query: 256 SPPRRRNPG 264
PP PG
Sbjct: 247 PPPPSAPPG 255
Score = 28.5 bits (62), Expect = 9.5
Identities = 28/116 (24%), Positives = 41/116 (35%), Gaps = 26/116 (22%)
Query: 153 GKASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGSPSSLSSS----------------- 195
G+ +S + P PP P ++P + P S +P++ SSS
Sbjct: 6 GRYGGSSHYPPPPVPPPPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQ 65
Query: 196 --QASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKHPS 249
+ C L+ P H PP L P P G PP P+ P P+
Sbjct: 66 QMHQKQMQCVLQ-PHHLPP-PPLPPPPVMPGGGYG-----DWQPPPPPMPPPPGPA 114
Score = 28.5 bits (62), Expect = 9.5
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 19/135 (14%)
Query: 86 GNKYITLKDCRILLKELENLEVYTFLLEKRLKKLSREGSSHHLPRQVRPGPVYKPAPARN 145
G ++ + I+LK + L++ E+ L+K+ GS + + P + + +N
Sbjct: 1444 GVMVLSQRQHEIILKAAQELKMLREQKEQ-LQKMKDFGSEPQMADHLPP----QESRLQN 1498
Query: 146 HRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLK 205
R G P S+ PP P+ P S+ + S +P + SS + P P+
Sbjct: 1499 TSSRPGM-YPPPGSYR-----PPPPMGKPPGSIVRPS-----APPARSSVPVTRPPVPIP 1547
Query: 206 HPSHRPPASTLSPNP 220
P PP L P P
Sbjct: 1548 PP---PPPPPLPPPP 1559
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 47.4 bits (111), Expect = 2e-05
Identities = 52/200 (26%), Positives = 75/200 (37%), Gaps = 22/200 (11%)
Query: 124 SSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSI 183
S H L R V+ P P G +S TS H P P P PS + +
Sbjct: 625 SPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQH-PPSLSPKPPTRSPSPPTQHTG 683
Query: 184 ESLGSPSSLSSSQA----SEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPP 239
+ G PS+ S A S L P++ P+H PP P T+ +S PP
Sbjct: 684 QPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKP-------NSQGPP 736
Query: 240 EPLR-PLKHPSHKPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKA---PERSCPH 295
P+ P +H +P +PP+ P + + ++ P A PE + PH
Sbjct: 737 NPMALPSEHGLEQP-SHTPPQTPTP-----PSTPPLGKQNPSLPAPQTLAGGNPETAQPH 790
Query: 296 TWWVPSSPRVIRGVGRCSDP 315
+P V + R S P
Sbjct: 791 AGTLPRPRPVPKPRNRPSVP 810
Score = 38.9 bits (89), Expect = 0.007
Identities = 42/174 (24%), Positives = 61/174 (35%), Gaps = 26/174 (14%)
Query: 120 SREGSSHHLPRQVRPGPVYKPAPARNH------RPRGGRGKASPTSFHVS------PRAP 167
S G+S H P P P+P H +P ++P + S P P
Sbjct: 655 SSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHP 714
Query: 168 PAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSP--------N 219
P + + + T S G P+ ++ L+ PSH PP + P N
Sbjct: 715 PPQPPTQATPLMHTKPNSQGPPNPMALPSEH----GLEQPSHTPPQTPTPPSTPPLGKQN 770
Query: 220 PTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRS--PPRRRNPGWVSWSDS 271
P+ + ++QP P P KP R PP + PG S DS
Sbjct: 771 PSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAGDS 824
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 47.4 bits (111), Expect = 2e-05
Identities = 52/200 (26%), Positives = 75/200 (37%), Gaps = 22/200 (11%)
Query: 124 SSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSI 183
S H L R V+ P P G +S TS H P P P PS + +
Sbjct: 547 SPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQH-PPSLSPKPPTRSPSPPTQHTG 605
Query: 184 ESLGSPSSLSSSQA----SEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPP 239
+ G PS+ S A S L P++ P+H PP P T+ +S PP
Sbjct: 606 QPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKP-------NSQGPP 658
Query: 240 EPLR-PLKHPSHKPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKA---PERSCPH 295
P+ P +H +P +PP+ P + + ++ P A PE + PH
Sbjct: 659 NPMALPSEHGLEQP-SHTPPQTPTP-----PSTPPLGKQNPSLPAPQTLAGGNPETAQPH 712
Query: 296 TWWVPSSPRVIRGVGRCSDP 315
+P V + R S P
Sbjct: 713 AGTLPRPRPVPKPRNRPSVP 732
Score = 38.9 bits (89), Expect = 0.007
Identities = 42/174 (24%), Positives = 61/174 (35%), Gaps = 26/174 (14%)
Query: 120 SREGSSHHLPRQVRPGPVYKPAPARNH------RPRGGRGKASPTSFHVS------PRAP 167
S G+S H P P P+P H +P ++P + S P P
Sbjct: 577 SSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHP 636
Query: 168 PAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSP--------N 219
P + + + T S G P+ ++ L+ PSH PP + P N
Sbjct: 637 PPQPPTQATPLMHTKPNSQGPPNPMALPSEH----GLEQPSHTPPQTPTPPSTPPLGKQN 692
Query: 220 PTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRS--PPRRRNPGWVSWSDS 271
P+ + ++QP P P KP R PP + PG S DS
Sbjct: 693 PSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAGDS 746
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 47.4 bits (111), Expect = 2e-05
Identities = 45/141 (31%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 127 HLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVS-----------PRAPPAPLASMP 175
H+P + PGP P P N P ASP S VS P PAP AS P
Sbjct: 1402 HVPSSL-PGPASSPMPIPNSSPL-----ASPVSSTVSVPLSSSLPISVPTTLPAP-ASAP 1454
Query: 176 SSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPPA---STLSPNPTSSTESLGYLSS 232
++P ++ ++ + + + PL P+ + PP+ S SP+ ++ T L S
Sbjct: 1455 LTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPS 1514
Query: 233 LSSSQPP-EPLRPLKHPSHKP 252
LSSSQ P PL SH P
Sbjct: 1515 LSSSQTPGHPLLLAPTSSHVP 1535
Score = 37.4 bits (85), Expect = 0.020
Identities = 42/134 (31%), Positives = 55/134 (41%), Gaps = 17/134 (12%)
Query: 134 PGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPA-----PLASMPSSVPKTSIESLGS 188
PG AP +H P G S + SP PA P S P+ P + SL +
Sbjct: 1521 PGHPLLLAPTSSHVP----GLNSTVAPACSPVLVPASALASPFPSAPNPAPAQA--SLLA 1574
Query: 189 PSSLSSSQASEPLCPLKHPSHR----PPASTLSPNPTSSTESLGYLSSLSSSQPPEP-LR 243
P+S +S + PL P+ P PA L+P P + S G L+SSQ P P +
Sbjct: 1575 PASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLA-PSPGAAPVLASSQTPVPVMA 1633
Query: 244 PLKHPSHKPHGRSP 257
P P SP
Sbjct: 1634 PSSTPGTSLASASP 1647
Score = 36.6 bits (83), Expect = 0.035
Identities = 43/131 (32%), Positives = 50/131 (38%), Gaps = 18/131 (13%)
Query: 125 SHHLPRQVRPGPVYKPAPARNHRPRGGRGKAS-PTSFHVSP------RAPPAPLASMPSS 177
S LP + P P P R P G +A PT V P P AS P +
Sbjct: 1335 SSGLPAVLNPRPTL--TPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEVSASAPGA 1392
Query: 178 VPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQ 237
P T L PSSL +S P+ P+ P AS P SST S+ SSL S
Sbjct: 1393 APLTISSPLHVPSSLPGPASS----PMPIPNSSPLAS-----PVSSTVSVPLSSSLPISV 1443
Query: 238 PPEPLRPLKHP 248
P P P
Sbjct: 1444 PTTLPAPASAP 1454
Score = 33.9 bits (76), Expect = 0.23
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 32/121 (26%)
Query: 162 VSPRAPPAPLASMPSSVPKTSIESLGSPSSLSSSQAS----------------------E 199
V+P P P++ +PSS P T+ G L+++Q
Sbjct: 1263 VAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRDGLT 1322
Query: 200 PLCPLKHPSHRPPAS----TLSPNPTSSTESLGYLSSLSSSQPPEP----LRPLKHPSHK 251
P+ PL P+ RPP+S L+P PT + L +L +++ P P +RPL H
Sbjct: 1323 PVPPLA-PAPRPPSSGLPAVLNPRPTLTPGRLP-TPTLGTARAPMPTPTLVRPLLKLVHS 1380
Query: 252 P 252
P
Sbjct: 1381 P 1381
Score = 32.3 bits (72), Expect = 0.66
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 23/121 (19%)
Query: 129 PRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGS 188
P+ + P PV++P P + + RG+ P+A P+ +I S G
Sbjct: 2916 PQPLGPQPVHRPNPLLSPVEKRRRGRP--------PKARDLPIPG--------TISSAGD 2959
Query: 189 PSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPL-RPLKH 247
+S S +Q P HPS P L PT++ + ++S+S P RP K+
Sbjct: 2960 GNSESRTQ------PPPHPSPLTPLPPLLVCPTATVANTVTTVTISTSPPKRKRGRPPKN 3013
Query: 248 P 248
P
Sbjct: 3014 P 3014
Score = 31.6 bits (70), Expect = 1.1
Identities = 38/134 (28%), Positives = 51/134 (38%), Gaps = 6/134 (4%)
Query: 129 PRQVRP--GPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLAS---MPSSVPKTSI 183
P VRP V+ P+P + G + HV P + P P +S +P+S P S
Sbjct: 1368 PTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHV-PSSLPGPASSPMPIPNSSPLASP 1426
Query: 184 ESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLR 243
S LSSS L P+ P +S T S L+S++ P
Sbjct: 1427 VSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPA 1486
Query: 244 PLKHPSHKPHGRSP 257
PS P G SP
Sbjct: 1487 APGPPSLAPSGASP 1500
Score = 31.6 bits (70), Expect = 1.1
Identities = 43/170 (25%), Positives = 59/170 (34%), Gaps = 24/170 (14%)
Query: 123 GSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTS 182
G P P P +P AR H G G SP + A LA P +V +
Sbjct: 2807 GPCEAAPSSSLPTPPQQPFIARRHIELGVTGGGSPEN------GDGALLAITPPAVKRRR 2860
Query: 183 IESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQ---PP 239
G P + S A + PS T +P E+L + Q P
Sbjct: 2861 ----GRPPKKNRSPADAGRGVDEAPSSTLKGKTNGADPVPGPETLIVADPVLEPQLIPGP 2916
Query: 240 EPL--------RPLKHPSHKPHGRSPPRRRN---PGWVSWSDSMQADSET 278
+PL PL P K PP+ R+ PG +S + ++S T
Sbjct: 2917 QPLGPQPVHRPNPLLSPVEKRRRGRPPKARDLPIPGTISSAGDGNSESRT 2966
Score = 30.0 bits (66), Expect = 3.3
Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 12/125 (9%)
Query: 134 PGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGSPSSLS 193
PGP P + P ASP PAP ++ + P +S SL +P+S+
Sbjct: 1736 PGPPLGPTQTLSLAPAPPLAPASPVG--------PAPAHTL-TLAPASSSASLLAPASVQ 1786
Query: 194 SSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPH 253
+ S P P+ A TL+ P S+ SSL S P+ S P
Sbjct: 1787 TLTLSPAPVPTLGPA---AAQTLALAPASTQSPASQASSLVVSASGAAPLPVTMVSRLPV 1843
Query: 254 GRSPP 258
+ P
Sbjct: 1844 SKDEP 1848
Score = 29.6 bits (65), Expect = 4.3
Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 18/106 (16%)
Query: 129 PRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLAS-----------MPSS 177
P + P P PA RP A+ + P + P P+++ +PS
Sbjct: 2426 PPRCSPARERVPRPAPRPRPTPASAPAAIPALVPVPVSAPVPISAPNPITILPVHILPSP 2485
Query: 178 VPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPP-ASTLSPNPTS 222
P + I SP+ + P P+H PP A T P+S
Sbjct: 2486 PPPSQIPPCSSPACTPPPACTPP------PAHTPPPAQTCLVTPSS 2525
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 46.6 bits (109), Expect = 3e-05
Identities = 48/170 (28%), Positives = 70/170 (41%), Gaps = 9/170 (5%)
Query: 136 PVYKP-APARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGSPSSLSS 194
P Y P +PA R GG SP+ SP P + P+S + SP+S S
Sbjct: 1591 PSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSY 1650
Query: 195 SQASEPLCPLKHPSHRPPASTLSP-NPTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPH 253
S S P PS+ P + + SP +P+ S S Y + S P P PS+ P
Sbjct: 1651 SPTSPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 254 GRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWVPSSP 303
S +P S+S + + S T P + + P+ + P+SP
Sbjct: 1710 SPS----YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN--YSPTSP 1753
Score = 44.3 bits (103), Expect = 2e-04
Identities = 50/174 (28%), Positives = 70/174 (40%), Gaps = 14/174 (8%)
Query: 134 PGPVYKPAPARNHRPRGGRGKA---SPTSFHVSPRAPPAPLASMPSSVPKTSIESLGSPS 190
PG P P+ + P G + SPTS PR+P PS P + S P+
Sbjct: 1569 PGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYS---PT 1625
Query: 191 SLSSSQASEPLCPLKHPSHRPPASTLSP-NPTSSTESLGYLSSLSSSQPPEPLRPLKHPS 249
S S S S P PS+ P + + SP +P+ S S Y + S P P PS
Sbjct: 1626 SPSYSPTSPNYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1684
Query: 250 HKPHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWVPSSP 303
+ P S +P S+S + + S T P +P S + P+SP
Sbjct: 1685 YSPTSPS----YSPTSPSYSPTSPSYSPTSPSYSP--TSPSYSPTSPSYSPTSP 1732
Score = 39.7 bits (91), Expect = 0.004
Identities = 45/159 (28%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 156 SPTSFHVSPRAP---PAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPP 212
SPTS SP +P P + P+S + SP+S + S S P PS+ P
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTS-PSYSPT 1765
Query: 213 ASTLSP-NPTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRSPPR------RRNPGW 265
+ + SP +P + S Y + S P P PS+ P S PR P
Sbjct: 1766 SPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP---SSPRYTPQSPTYTPSS 1822
Query: 266 VSWSDSMQADSETDAIICPMCKAPERSCPHTWWVPSSPR 304
S+S S + S T P + S P + P+SP+
Sbjct: 1823 PSYSPSSPSYSPTSPKYTPTSPSYSPSSPE--YTPTSPK 1859
Score = 39.3 bits (90), Expect = 0.005
Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 11/152 (7%)
Query: 156 SPTSFHVSPRAP---PAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPP 212
SPTS SP +P P + P+S + SP+S S S S P PS+ P
Sbjct: 1679 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PSYSPT 1737
Query: 213 ASTLSP-NPTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRSPPRRRNPGWVSWSDS 271
+ + SP +P S S Y + S P P P++ P SP +P S+S +
Sbjct: 1738 SPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTP--TSP--NYSPTSPSYSPT 1793
Query: 272 MQADSETDAIICPMCKAPERSCPHTWWVPSSP 303
+ S T P +P + + PSSP
Sbjct: 1794 SPSYSPTSPSYSP--SSPRYTPQSPTYTPSSP 1823
Score = 38.1 bits (87), Expect = 0.012
Identities = 44/155 (28%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 156 SPTSFHVSPRAP---PAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPP 212
SPTS SP +P P + P+S + SP+S S S S P PS+ P
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PSYSPT 1723
Query: 213 ASTLSP-NPTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRS-PPRRRN--PGWVSW 268
+ + SP +P+ S S Y + + P P PS+ P S P N P ++
Sbjct: 1724 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNY 1783
Query: 269 SDSMQADSETDAIICPMCKAPERSCPHTWWVPSSP 303
S + + S T P + S P + P SP
Sbjct: 1784 SPTSPSYSPTSPSYSPTSPSYSPSSPR--YTPQSP 1816
Score = 36.6 bits (83), Expect = 0.035
Identities = 44/155 (28%), Positives = 61/155 (39%), Gaps = 10/155 (6%)
Query: 156 SPTSFHVSPRAP---PAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPP 212
SPTS SP +P P P+S T SP+S S S S P P++ P
Sbjct: 1728 SPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTS-PNYSPT 1786
Query: 213 ASTLSP-NPTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRS---PPRRRNPGWVSW 268
+ + SP +P+ S S Y S P P PS+ P S + P S+
Sbjct: 1787 SPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSY 1846
Query: 269 SDSMQADSETDAIICPMCKAPERSCPHTWWVPSSP 303
S S + T P +P+ S + P+SP
Sbjct: 1847 SPSSPEYTPTSPKYSP--TSPKYSPTSPKYSPTSP 1879
Score = 36.2 bits (82), Expect = 0.046
Identities = 44/158 (27%), Positives = 63/158 (39%), Gaps = 14/158 (8%)
Query: 156 SPTSFHVSPRAP---PAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPP 212
SPTS SP +P P + P+S + SP+S S S S P PS+ P
Sbjct: 1658 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PSYSPT 1716
Query: 213 ASTLSP-NPTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRSPPRRRNPGWVSWSDS 271
+ + SP +P+ S S Y + S P P P++ P S +P S+S +
Sbjct: 1717 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPS----YSPTSPSYSPT 1772
Query: 272 MQADSETDAIICPMC-----KAPERSCPHTWWVPSSPR 304
+ T P +P S + PSSPR
Sbjct: 1773 SPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPR 1810
Score = 35.4 bits (80), Expect = 0.078
Identities = 47/173 (27%), Positives = 69/173 (39%), Gaps = 21/173 (12%)
Query: 136 PVYKPAPARNHRPRGGRGKASPTSFHVSPRAP---PAPLASMPSSVPKTSIESLGSPSSL 192
P Y P + N+ P SPTS SP +P P + PSS T +PSS
Sbjct: 1767 PSYSPT-SPNYTPTSPN--YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSP 1823
Query: 193 SSSQASEPLCPLKHPSHRPPASTLSP-NPTSSTESLGYLSSLSSSQPPEPLRPLKHPSHK 251
S S +S PS+ P + +P +P+ S S Y + P P P +
Sbjct: 1824 SYSPSS--------PSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1875
Query: 252 PHGRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWVPSSPR 304
P SP +P +S + S T + P +P+ S + P+SP+
Sbjct: 1876 P--TSP--TYSPTTPKYSPTSPTYSPTSPVYTP--TSPKYSPTSPTYSPTSPK 1922
Score = 33.5 bits (75), Expect = 0.30
Identities = 31/125 (24%), Positives = 43/125 (34%), Gaps = 9/125 (7%)
Query: 136 PVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGSPSSLSSS 195
P Y P SP SP P + P+S + +P+S + S
Sbjct: 1725 PSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYS 1784
Query: 196 QASEPLCPLKHPSHRPPASTLSP--------NPTSSTESLGYLSSLSSSQPPEPLRPLKH 247
S P PS+ P + + SP +PT + S Y S S P P
Sbjct: 1785 PTSPSYSPTS-PSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTS 1843
Query: 248 PSHKP 252
PS+ P
Sbjct: 1844 PSYSP 1848
Score = 32.3 bits (72), Expect = 0.66
Identities = 31/107 (28%), Positives = 39/107 (36%), Gaps = 9/107 (8%)
Query: 129 PRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGS 188
P P Y P + SPT +P+ P P+S T S
Sbjct: 1851 PEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYS 1910
Query: 189 PSSLSSSQAS---EPLCPLKHPSHRPPASTLSP-----NPTSSTESL 227
P+S + S S P P P+ P ST SP +PTS T SL
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPT-SPKGSTYSPTSPGYSPTSPTYSL 1956
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 45.1 bits (105), Expect = 1e-04
Identities = 54/195 (27%), Positives = 68/195 (34%), Gaps = 28/195 (14%)
Query: 113 EKRLKKLSREGSSHHLPRQV---RPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPA 169
E+ + LS EG +P V P P PAPA G G +P S AP
Sbjct: 703 ERSQQPLSAEGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQI 762
Query: 170 PLA------------SMPSSVPKTSIESLGSPS---------SLSSSQASEPLCPLKHPS 208
P A S+P P L SP S S + P P HP
Sbjct: 763 PAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPC 822
Query: 209 HRPPASTLSPNPTSSTESLGY---LSSLSSSQPPEPLRPLKHPSHKPHGRSPPRRRNPGW 265
P A P LG S+ + + P P PL+ S P G PP P
Sbjct: 823 PPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPP- 881
Query: 266 VSWSDSMQADSETDA 280
S S ++ + SET +
Sbjct: 882 SSTSSAVASSSETSS 896
Score = 33.9 bits (76), Expect = 0.23
Identities = 43/161 (26%), Positives = 55/161 (34%), Gaps = 27/161 (16%)
Query: 123 GSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSP--RAPPA--------PLA 172
G S HLP P P P+ + RP+ S H P +APP
Sbjct: 786 GDSPHLPS---PHPTRPPSRPPS-RPQSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQL 841
Query: 173 SMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLS------------PNP 220
+P + + G P Q+ P PL H PP+ST S P P
Sbjct: 842 GVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAP 901
Query: 221 TSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRSPPRRR 261
T S L + S + P P P H +P PP R
Sbjct: 902 TPSDFQLQFPPSQGPHKSPTP-PPTLHLVPEPAAPPPPPPR 941
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 44.7 bits (104), Expect = 1e-04
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 157 PTSFHVSPRAPPAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTL 216
P SF SP++PP A P P +S S S L SS S P P + P+ P S +
Sbjct: 756 PQSFPESPQSPPEGPAQSPLQRPVSSFFSYTLASLLQSSHES-PQSPPEGPAQSPLQSPV 814
Query: 217 SPNPTSSTESLGY-----------LSSLSSSQPPEPLR 243
S P+S++ SL SSLS S P PL+
Sbjct: 815 SSFPSSTSSSLSQSSPVSSFPSSTSSSLSKSSPESPLQ 852
Score = 34.7 bits (78), Expect = 0.13
Identities = 47/159 (29%), Positives = 58/159 (36%), Gaps = 23/159 (14%)
Query: 124 SSHHLPRQVRP----GPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVP 179
S H+ P+ + P Y P P G SP F SP +S+ S V
Sbjct: 576 SPHYFPQSPQGEDSLSPHYFP-----QSPPQGEDSMSPLYFPQSPLQGEEFQSSLQSPVS 630
Query: 180 KTSIESLGS-PSSLSSSQASEPLCPLKHPSH---RPPASTLSPNPTSSTESLGY-LSSLS 234
S + S P S S S P P++ P H PP S +P S ES SLS
Sbjct: 631 ICSSSTPSSLPQSFPESSQSPPEGPVQSPLHSPQSPPEGMHSQSPLQSPESAPEGEDSLS 690
Query: 235 SSQ-PPEPLRPLKHPSHKPHGRSPPRRRNPGWVSWSDSM 272
Q P PL S +SPP W DS+
Sbjct: 691 PLQIPQSPLEGEDSLSSLHFPQSPP--------EWEDSL 721
Score = 34.7 bits (78), Expect = 0.13
Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 11/125 (8%)
Query: 135 GPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASM-PSSVPKTSIESLGSPSSLS 193
GPV P + P G + SP SP + P S+ P +P++ +E S SSL
Sbjct: 654 GPVQSPLHSPQSPPEGMHSQ-SPLQ---SPESAPEGEDSLSPLQIPQSPLEGEDSLSSLH 709
Query: 194 SSQA----SEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQ--PPEPLRPLKH 247
Q+ + L PL P P + S +SLS Q P P P +
Sbjct: 710 FPQSPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSICSSSTSLSLPQSFPESPQSPPEG 769
Query: 248 PSHKP 252
P+ P
Sbjct: 770 PAQSP 774
Score = 31.2 bits (69), Expect = 1.5
Identities = 36/125 (28%), Positives = 47/125 (37%), Gaps = 20/125 (16%)
Query: 148 PRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSIES------LGSPSSLSSSQ-ASEP 200
P G +S P + P +P++S ES L SP S S + +S+P
Sbjct: 7 PTAGMPSLLQSSSESPQSCPEGEDSQSPLQIPQSSPESDDTLYPLQSPQSRSEGEDSSDP 66
Query: 201 L----------CPLKHPSHRPPA-STLSP--NPTSSTESLGYLSSLSSSQPPEPLRPLKH 247
L PL+ P P T SP N SS E LS L SQ P ++
Sbjct: 67 LQRPPEGKDSQSPLQIPQSSPEGDDTQSPLQNSQSSPEGKDSLSPLEISQSPPEGEDVQS 126
Query: 248 PSHKP 252
P P
Sbjct: 127 PLQNP 131
Score = 29.3 bits (64), Expect = 5.6
Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 181 TSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPE 240
+S SL P S S S P P + P RP +S S S +S S S PPE
Sbjct: 748 SSSTSLSLPQSFPESPQSPPEGPAQSPLQRPVSSFFSYTLASLLQS----SHESPQSPPE 803
Query: 241 PLRPLKHPSHKPHGRSP 257
P + P P P
Sbjct: 804 --GPAQSPLQSPVSSFP 818
Score = 28.9 bits (63), Expect = 7.3
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 16/81 (19%)
Query: 160 FHVSPRAPPAPLASMPSSVPKTSIESLGSPSSLSSSQASE----------PLCPLKHPSH 209
F SP + +P P SV + + + S + +S Q+S P PL+ P
Sbjct: 144 FQSSPESTQSPFEGFPQSVLQIPVSAASSSTLVSIFQSSPESTQSPFEGFPQSPLQIPVS 203
Query: 210 RPPASTL------SPNPTSST 224
R +STL SP T ST
Sbjct: 204 RSFSSTLLSIFQSSPERTQST 224
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 44.3 bits (103), Expect = 2e-04
Identities = 54/201 (26%), Positives = 71/201 (35%), Gaps = 43/201 (21%)
Query: 139 KPAPARNHRPRGGRGKASPTSFHVS-------------------PRAPPAPLASMPSSVP 179
+P+PA RP G G P S +S PRAP P P +
Sbjct: 210 EPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQ 269
Query: 180 -----------KTSIESLG--SPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTES 226
K + +LG S S L++ S P P PS + S + P+ +T S
Sbjct: 270 ALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTS 329
Query: 227 LG--YLSSLSSSQPPEPLRPLKHPSHK--PHGRSPPRRRNPGWVSWSDSMQADSETDAII 282
LG L + S P PL PL P + P PP + P S A +
Sbjct: 330 LGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPP-------SPPASPPLSPLA 382
Query: 283 CPMCKAPERSCPHTWWVPSSP 303
P +AP H P SP
Sbjct: 383 TPSPQAPNALAVHLLQAPFSP 403
Score = 38.5 bits (88), Expect = 0.009
Identities = 58/227 (25%), Positives = 70/227 (30%), Gaps = 25/227 (11%)
Query: 129 PRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGS 188
P Q P P A P G+A F S P +PLA+ P P L +
Sbjct: 477 PPQAPPALATPPLQALPSPPASFPGQAP---FSPSASLPMSPLATPPPQAPPV----LAA 529
Query: 189 PSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKHP 248
P L S P P RPP +P P +S +L+ PP P R
Sbjct: 530 P--LLQVPPSPPASPTLQAPRRPP----TPGPDTSVSGPRLTLALAPGPPPPPSRSPSST 583
Query: 249 SHKPH--GRSPPRRRNPGWVSWSDSMQADSETDAIICPMCKAPERSCPHTWWV--PSSPR 304
P G S P + DS E A P A +C W P+ P
Sbjct: 584 LSGPDLAGHSSSATSTPEELRGYDS---GPEGGAAASPPPDAELAACHPAAWSRGPAPPL 640
Query: 305 VIRGVGRCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLPTHLPKA 351
RG P L W + Y E P T P A
Sbjct: 641 AFRGA-----PGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGA 682
Score = 37.7 bits (86), Expect = 0.016
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 164 PRAPPA----PLASMPSSVPKTSIESLGSPSS----------LSSSQASEPLCPLKHPSH 209
P+APPA PL + PS + L +PS L + + P P++ P
Sbjct: 355 PQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 414
Query: 210 RPPASTLSPNPTSSTESLGYLSSLSSSQPPE-PLRPLKHPSHKPHGRSPP 258
P + +SP+ T +++ L++ PP P P PS P ++PP
Sbjct: 415 PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 464
Score = 30.4 bits (67), Expect = 2.5
Identities = 40/146 (27%), Positives = 53/146 (36%), Gaps = 23/146 (15%)
Query: 129 PRQVRPGPVYKP--APARNHRPRGGRGKA-----SPTSFHVSP--RAPPAPLASMPSSVP 179
P Q P P P +P P+ A +P S SP +AP +P AS P S
Sbjct: 365 PLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPS 424
Query: 180 KTSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPP 239
T PS S A+ PL P PP S + P + L + PP
Sbjct: 425 ATP------PSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPP 478
Query: 240 E--------PLRPLKHPSHKPHGRSP 257
+ PL+ L P G++P
Sbjct: 479 QAPPALATPPLQALPSPPASFPGQAP 504
Score = 29.3 bits (64), Expect = 5.6
Identities = 52/235 (22%), Positives = 83/235 (35%), Gaps = 25/235 (10%)
Query: 134 PGPVYKPAPARNHRP-RGGRGKASPTSFHVSP-----------RAPPAPLA--SMPSSVP 179
P + P R RP GRG+ +P + + SP P PL + S
Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 130
Query: 180 KTSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPP 239
+T + + S+ ++ P+ P+ ++ ++ +G S++P
Sbjct: 131 ETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPR 190
Query: 240 EPLR-PLKHPS----HKPHGRSPPRRRNP---GWVSWSDSMQADSETDAIICPMCKAPE- 290
P P K S H SP RR P G + S S + P P
Sbjct: 191 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSA 250
Query: 291 RSCPHTWWVPSSPRVIRGVGRCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLP 345
R P PS P+ +G+ P + R++AA A +SS P+ P
Sbjct: 251 RGTPRAPAHPSQPKP-KGLQALRPPQV-TPPRKDAAPALGPLSSSPLATPSPSAP 303
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 43.9 bits (102), Expect = 2e-04
Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Query: 129 PRQVRPGPVYK-----PAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSV----- 178
P P P ++ P RP+G K +P +P APP P + PS +
Sbjct: 1518 PPAAAPTPTHRRTSAIPRAFTRERPQGR--KEAPAPSKAAPAAPP-PARTQPSLIADETP 1574
Query: 179 PKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTES 226
P S+ S S SSLS + SEP P HP R PA T P P +S
Sbjct: 1575 PCYSLSS--SASSLSEPEPSEP--PAVHPRGREPAVTKDPGPGGGRDS 1618
Score = 40.0 bits (92), Expect = 0.003
Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 10/146 (6%)
Query: 164 PRAPPAPLASMPSSVPKTSIESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSS 223
P A P P S++P+ P + A P P R S ++ + T
Sbjct: 1519 PAAAPTPTHRRTSAIPRAFTRE--RPQGRKEAPAPSKAAPAAPPPARTQPSLIA-DETPP 1575
Query: 224 TESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRSPPRRRNPGWVSWSDSMQADSETDAII- 282
SL SS SS PEP P P+ P GR P ++PG DS + + ++
Sbjct: 1576 CYSLS--SSASSLSEPEPSEP---PAVHPRGREPAVTKDPGPGGGRDSSPSPRAAEELLQ 1630
Query: 283 -CPMCKAPERSCPHTWWVPSSPRVIR 307
C P R P + PR R
Sbjct: 1631 RCISSALPRRRPPVSGLRRRKPRATR 1656
Score = 38.1 bits (87), Expect = 0.012
Identities = 44/150 (29%), Positives = 61/150 (40%), Gaps = 25/150 (16%)
Query: 137 VYKPAPARNHRPRGGRG-KASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGSPSSLSS- 194
+Y P+PA +P+G G +A+P A PA A +PS + S SL P+ S
Sbjct: 1794 IYVPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQRS-RSLHRPAKTSEL 1852
Query: 195 ---SQASEPLCPLKHPSHRPPASTLSPNPTSS---------TESLGYLSSLSSSQPPE-P 241
SQ P + P +S+ +P S T++ G L +S P+ P
Sbjct: 1853 ATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTP 1912
Query: 242 LRPLKHPSHKPHGRSP--------PRRRNP 263
R L HK RSP P RR P
Sbjct: 1913 ARTLLAKQHKTQ-RSPVRIPFMQRPARRGP 1941
Score = 32.3 bits (72), Expect = 0.66
Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 141 APARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGSPSSLSSSQASEP 200
+PA +PRG + + R + P + PK + +P ++ ++P
Sbjct: 1767 SPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGTPGPRATPRKVAPPCLAQP 1826
Query: 201 LCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRSP--- 257
P K PS S P ++E L LS S P P R K PS SP
Sbjct: 1827 AAPAKVPSPGQQRSRSLHRPAKTSE-LATLSQPPRSATP-PARLAKTPSSSSSQTSPASQ 1884
Query: 258 --PRRRNP 263
PR+R P
Sbjct: 1885 PLPRKRPP 1892
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 43.5 bits (101), Expect = 3e-04
Identities = 39/139 (28%), Positives = 53/139 (38%), Gaps = 6/139 (4%)
Query: 124 SSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSI 183
SS P ++P A + RPR G S SPR P PL P +
Sbjct: 119 SSPRTPLYLQPDAYGSLDRATSPRPRAFDGAGSSLGRAPSPRPGPGPLRQQGPPTPFDFL 178
Query: 184 ESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLR 243
GSP ++ + P + PS RPPA+ ++ SL L S S+ P
Sbjct: 179 GRAGSPRGSPLAEGPQAFFPERGPSPRPPATAYDAPASAFGSSL--LGSGGSAFAP---- 232
Query: 244 PLKHPSHKPHGRSPPRRRN 262
PL+ R PP+ N
Sbjct: 233 PLRAQDDLTLRRRPPKAWN 251
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 43.5 bits (101), Expect = 3e-04
Identities = 39/139 (28%), Positives = 53/139 (38%), Gaps = 6/139 (4%)
Query: 124 SSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFHVSPRAPPAPLASMPSSVPKTSI 183
SS P ++P A + RPR G S SPR P PL P +
Sbjct: 119 SSPRTPLYLQPDAYGSLDRATSPRPRAFDGAGSSLGRAPSPRPGPGPLRQQGPPTPFDFL 178
Query: 184 ESLGSPSSLSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLR 243
GSP ++ + P + PS RPPA+ ++ SL L S S+ P
Sbjct: 179 GRAGSPRGSPLAEGPQAFFPERGPSPRPPATAYDAPASAFGSSL--LGSGGSAFAP---- 232
Query: 244 PLKHPSHKPHGRSPPRRRN 262
PL+ R PP+ N
Sbjct: 233 PLRAQDDLTLRRRPPKAWN 251
>gi|15529996 son of sevenless homolog 1 [Homo sapiens]
Length = 1333
Score = 43.5 bits (101), Expect = 3e-04
Identities = 43/146 (29%), Positives = 60/146 (41%), Gaps = 15/146 (10%)
Query: 124 SSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPT---SFHVSPRAPPAPLASMPSSVPK 180
SS L + PV P P R RP ++SP+ S H+ +PPA P+S
Sbjct: 1136 SSISLTKGTDEVPVPPPVPPRR-RPESAPAESSPSKIMSKHLD--SPPAIPPRQPTSKAY 1192
Query: 181 TSIESLGSPSSLSSSQASEPLCPLKHPSHRPPAST-----LSPNPTSSTESLG---YLSS 232
+ S+ +S+S S PL P + P P + L P P G + +S
Sbjct: 1193 SPRYSISDRTSISDPPESPPLLPPREPVRTPDVFSSSPLHLQPPPLGKKSDHGNAFFPNS 1252
Query: 233 LSSSQPPEPLRPLKHPSHKPHGRSPP 258
S PP P P H + + H SPP
Sbjct: 1253 PSPFTPPPPQTPSPHGTRR-HLPSPP 1277
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 43.5 bits (101), Expect = 3e-04
Identities = 38/132 (28%), Positives = 49/132 (37%), Gaps = 14/132 (10%)
Query: 134 PGPVYKPAPARNHRPRG--GRGKASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGSPSS 191
PGP PAP RP G G P V P P P P P+ + + +P+
Sbjct: 238 PGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPT- 296
Query: 192 LSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKH---- 247
S+ Q P P PS PPA + +P ++ S P P+ PL
Sbjct: 297 -STPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQT----QSPGQPAQPAPMVPLHQKQSR 351
Query: 248 --PSHKPHGRSP 257
P KP G P
Sbjct: 352 ITPIQKPRGLDP 363
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 43.5 bits (101), Expect = 3e-04
Identities = 38/132 (28%), Positives = 49/132 (37%), Gaps = 14/132 (10%)
Query: 134 PGPVYKPAPARNHRPRG--GRGKASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGSPSS 191
PGP PAP RP G G P V P P P P P+ + + +P+
Sbjct: 238 PGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPT- 296
Query: 192 LSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKH---- 247
S+ Q P P PS PPA + +P ++ S P P+ PL
Sbjct: 297 -STPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQT----QSPGQPAQPAPMVPLHQKQSR 351
Query: 248 --PSHKPHGRSP 257
P KP G P
Sbjct: 352 ITPIQKPRGLDP 363
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 43.5 bits (101), Expect = 3e-04
Identities = 38/132 (28%), Positives = 49/132 (37%), Gaps = 14/132 (10%)
Query: 134 PGPVYKPAPARNHRPRG--GRGKASPTSFHVSPRAPPAPLASMPSSVPKTSIESLGSPSS 191
PGP PAP RP G G P V P P P P P+ + + +P+
Sbjct: 238 PGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPT- 296
Query: 192 LSSSQASEPLCPLKHPSHRPPASTLSPNPTSSTESLGYLSSLSSSQPPEPLRPLKH---- 247
S+ Q P P PS PPA + +P ++ S P P+ PL
Sbjct: 297 -STPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQT----QSPGQPAQPAPMVPLHQKQSR 351
Query: 248 --PSHKPHGRSP 257
P KP G P
Sbjct: 352 ITPIQKPRGLDP 363
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,163,813
Number of Sequences: 37866
Number of extensions: 1072024
Number of successful extensions: 9496
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 994
Number of HSP's that attempted gapping in prelim test: 7015
Number of HSP's gapped (non-prelim): 2977
length of query: 353
length of database: 18,247,518
effective HSP length: 103
effective length of query: 250
effective length of database: 14,347,320
effective search space: 3586830000
effective search space used: 3586830000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.