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Search of human proteins with 169168296
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169168296 PREDICTED: hypothetical protein [Homo sapiens]
(359 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169168296 PREDICTED: hypothetical protein [Homo sapiens] 738 0.0
gi|169168044 PREDICTED: hypothetical protein [Homo sapiens] 738 0.0
gi|169167512 PREDICTED: hypothetical protein [Homo sapiens] 692 0.0
gi|19924099 synapsin I isoform Ia [Homo sapiens] 56 6e-08
gi|19924097 synapsin I isoform Ib [Homo sapiens] 56 6e-08
gi|150170670 piccolo isoform 2 [Homo sapiens] 54 2e-07
gi|150378539 piccolo isoform 1 [Homo sapiens] 54 2e-07
gi|239752992 PREDICTED: hypothetical protein XP_002345322 [Homo ... 51 2e-06
gi|239747550 PREDICTED: hypothetical protein XP_002347647 [Homo ... 51 2e-06
gi|239741424 PREDICTED: hypothetical protein XP_002342197 [Homo ... 51 2e-06
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 50 2e-06
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 50 3e-06
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 49 7e-06
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 49 9e-06
gi|153070260 myristoylated alanine-rich protein kinase C substra... 48 1e-05
gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens] 47 2e-05
gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens] 47 2e-05
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 47 3e-05
gi|110227615 echinoderm microtubule associated protein like 3 [H... 47 3e-05
gi|33286446 opioid growth factor receptor [Homo sapiens] 47 3e-05
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 46 5e-05
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 46 6e-05
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 46 6e-05
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 45 8e-05
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 45 8e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 1e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 1e-04
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 45 1e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 45 1e-04
>gi|169168296 PREDICTED: hypothetical protein [Homo sapiens]
Length = 359
Score = 738 bits (1906), Expect = 0.0
Identities = 359/359 (100%), Positives = 359/359 (100%)
Query: 1 MYRVKRMSFCMGESGVYVLLDIVIDLNHKRRFHVYLATVDDRAVGEWTVMPISCLELYGV 60
MYRVKRMSFCMGESGVYVLLDIVIDLNHKRRFHVYLATVDDRAVGEWTVMPISCLELYGV
Sbjct: 1 MYRVKRMSFCMGESGVYVLLDIVIDLNHKRRFHVYLATVDDRAVGEWTVMPISCLELYGV 60
Query: 61 HHCLRPITILPTSLSPILTSKKTCVQLKGKVEGYKVEKHKYKMSAIQEMAKMMKHSSPSK 120
HHCLRPITILPTSLSPILTSKKTCVQLKGKVEGYKVEKHKYKMSAIQEMAKMMKHSSPSK
Sbjct: 61 HHCLRPITILPTSLSPILTSKKTCVQLKGKVEGYKVEKHKYKMSAIQEMAKMMKHSSPSK 120
Query: 121 GLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPA 180
GLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPA
Sbjct: 121 GLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPA 180
Query: 181 EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQL 240
EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQL
Sbjct: 181 EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQL 240
Query: 241 PQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCS 300
PQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCS
Sbjct: 241 PQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCS 300
Query: 301 PPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLHSPRLPCS 359
PPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLHSPRLPCS
Sbjct: 301 PPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLHSPRLPCS 359
>gi|169168044 PREDICTED: hypothetical protein [Homo sapiens]
Length = 359
Score = 738 bits (1906), Expect = 0.0
Identities = 359/359 (100%), Positives = 359/359 (100%)
Query: 1 MYRVKRMSFCMGESGVYVLLDIVIDLNHKRRFHVYLATVDDRAVGEWTVMPISCLELYGV 60
MYRVKRMSFCMGESGVYVLLDIVIDLNHKRRFHVYLATVDDRAVGEWTVMPISCLELYGV
Sbjct: 1 MYRVKRMSFCMGESGVYVLLDIVIDLNHKRRFHVYLATVDDRAVGEWTVMPISCLELYGV 60
Query: 61 HHCLRPITILPTSLSPILTSKKTCVQLKGKVEGYKVEKHKYKMSAIQEMAKMMKHSSPSK 120
HHCLRPITILPTSLSPILTSKKTCVQLKGKVEGYKVEKHKYKMSAIQEMAKMMKHSSPSK
Sbjct: 61 HHCLRPITILPTSLSPILTSKKTCVQLKGKVEGYKVEKHKYKMSAIQEMAKMMKHSSPSK 120
Query: 121 GLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPA 180
GLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPA
Sbjct: 121 GLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPA 180
Query: 181 EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQL 240
EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQL
Sbjct: 181 EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQL 240
Query: 241 PQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCS 300
PQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCS
Sbjct: 241 PQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCS 300
Query: 301 PPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLHSPRLPCS 359
PPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLHSPRLPCS
Sbjct: 301 PPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLHSPRLPCS 359
>gi|169167512 PREDICTED: hypothetical protein [Homo sapiens]
Length = 442
Score = 692 bits (1786), Expect = 0.0
Identities = 337/346 (97%), Positives = 340/346 (98%)
Query: 14 SGVYVLLDIVIDLNHKRRFHVYLATVDDRAVGEWTVMPISCLELYGVHHCLRPITILPTS 73
S V ++ + DLNHKRRFHVYLATVDDRAVGEWTVMPISCLELYGVHHCLRPITILPTS
Sbjct: 97 SQVVNVVSPISDLNHKRRFHVYLATVDDRAVGEWTVMPISCLELYGVHHCLRPITILPTS 156
Query: 74 LSPILTSKKTCVQLKGKVEGYKVEKHKYKMSAIQEMAKMMKHSSPSKGLPLMSKHNKAPG 133
LSPILTSKKTCVQLKGKVEGYKVEKHKYKMSAIQEMAKMMKHSSPSKGLPLMSKHNKAPG
Sbjct: 157 LSPILTSKKTCVQLKGKVEGYKVEKHKYKMSAIQEMAKMMKHSSPSKGLPLMSKHNKAPG 216
Query: 134 PQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDD 193
PQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDD
Sbjct: 217 PQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDD 276
Query: 194 GSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAR 253
GSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAR
Sbjct: 277 GSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAR 336
Query: 254 EQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGP 313
EQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGP
Sbjct: 337 EQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGP 396
Query: 314 RLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLHSPRLPCS 359
RLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLHSPRLPCS
Sbjct: 397 RLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLHSPRLPCS 442
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 55.8 bits (133), Expect = 6e-08
Identities = 72/243 (29%), Positives = 96/243 (39%), Gaps = 41/243 (16%)
Query: 119 SKGLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRP 178
++ LP + + +PG + S GQ T S G A+ LG R T A P ++ RP
Sbjct: 415 AQALPRQRQRDASPG-RGSHGQ-TPSPG-----ALPLG---RQTSQQPAGPP---AQQRP 461
Query: 179 PAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASA 238
P + G PP PG G ++ +R P Q Q G G A +
Sbjct: 462 PPQ--GGPPQPGP--GPQRQGPPLQQR---------------PPPQGQQHLSGLGPPAGS 502
Query: 239 QLPQGLPRSAGLP---AREQPPPTQSRGRLQSPCAREASTSPAL-TPRSQYPKRPQGP-- 292
LPQ LP P A + PPTQ +GR P A PA P S P+R GP
Sbjct: 503 PLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQ 562
Query: 293 ARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLH 352
A + S S P + ++ P++ P P TR +S GP P G
Sbjct: 563 ATRQTSVSGPAPPKASGAPPGGQQRQGPPQK---PPGPAGPTRQASQAGPVPRTGPPTTQ 619
Query: 353 SPR 355
PR
Sbjct: 620 QPR 622
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 55.8 bits (133), Expect = 6e-08
Identities = 72/243 (29%), Positives = 96/243 (39%), Gaps = 41/243 (16%)
Query: 119 SKGLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRP 178
++ LP + + +PG + S GQ T S G A+ LG R T A P ++ RP
Sbjct: 415 AQALPRQRQRDASPG-RGSHGQ-TPSPG-----ALPLG---RQTSQQPAGPP---AQQRP 461
Query: 179 PAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASA 238
P + G PP PG G ++ +R P Q Q G G A +
Sbjct: 462 PPQ--GGPPQPGP--GPQRQGPPLQQR---------------PPPQGQQHLSGLGPPAGS 502
Query: 239 QLPQGLPRSAGLP---AREQPPPTQSRGRLQSPCAREASTSPAL-TPRSQYPKRPQGP-- 292
LPQ LP P A + PPTQ +GR P A PA P S P+R GP
Sbjct: 503 PLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQ 562
Query: 293 ARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLH 352
A + S S P + ++ P++ P P TR +S GP P G
Sbjct: 563 ATRQTSVSGPAPPKASGAPPGGQQRQGPPQK---PPGPAGPTRQASQAGPVPRTGPPTTQ 619
Query: 353 SPR 355
PR
Sbjct: 620 QPR 622
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 53.9 bits (128), Expect = 2e-07
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 176 GRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTD---PGQEVQADCGG 232
G+ PA+ G P + G+PK ++ + P PG + PG+ G
Sbjct: 398 GKTPAQQPGPAKPPTQQVGTPKPLAQQPG-LQSPAKAPGPTKTPVQQPGPGKIPAQQAGP 456
Query: 233 GRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQ-G 291
G+ ++ Q P S LP +PPP Q P ++ P+ P S P Q G
Sbjct: 457 GKTSAQQTGPTKPPSQ-LPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPG 515
Query: 292 PAR----NRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPG 343
PA+ GS PP ++ P KPSA + + + PS QST+ S G G
Sbjct: 516 PAKPSPQQPGSTKPP-------SQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSG 564
Score = 46.6 bits (109), Expect = 3e-05
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 31/192 (16%)
Query: 177 RPPAEVEGAPPLP-----GKD----DGSPKE-AEERARRFR-------KPLLPPGWSPRT 219
+PP + + P+P G+D DG+PK + ++ + + KP+ P +P+T
Sbjct: 208 KPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQT 267
Query: 220 TDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPP---PTQSRGRLQSPCAREASTS 276
+Q D + A + +G LP+ +PP PT + Q P ++
Sbjct: 268 DHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPG 327
Query: 277 PALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRG 336
PA P +Q + A+ G+ PP+ + P KP A + P P Q T
Sbjct: 328 PA-KPPAQPSGLTKPLAQQPGTVKPPV-------QPPGTTKPPAQPLGPAKP-PAQQTGS 378
Query: 337 S--SSRGPGPMA 346
SS PGP A
Sbjct: 379 EKPSSEQPGPKA 390
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 53.9 bits (128), Expect = 2e-07
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 176 GRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTD---PGQEVQADCGG 232
G+ PA+ G P + G+PK ++ + P PG + PG+ G
Sbjct: 398 GKTPAQQPGPAKPPTQQVGTPKPLAQQPG-LQSPAKAPGPTKTPVQQPGPGKIPAQQAGP 456
Query: 233 GRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQ-G 291
G+ ++ Q P S LP +PPP Q P ++ P+ P S P Q G
Sbjct: 457 GKTSAQQTGPTKPPSQ-LPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPG 515
Query: 292 PAR----NRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPG 343
PA+ GS PP ++ P KPSA + + + PS QST+ S G G
Sbjct: 516 PAKPSPQQPGSTKPP-------SQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSG 564
Score = 46.6 bits (109), Expect = 3e-05
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 31/192 (16%)
Query: 177 RPPAEVEGAPPLP-----GKD----DGSPKE-AEERARRFR-------KPLLPPGWSPRT 219
+PP + + P+P G+D DG+PK + ++ + + KP+ P +P+T
Sbjct: 208 KPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQT 267
Query: 220 TDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPP---PTQSRGRLQSPCAREASTS 276
+Q D + A + +G LP+ +PP PT + Q P ++
Sbjct: 268 DHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPG 327
Query: 277 PALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRG 336
PA P +Q + A+ G+ PP+ + P KP A + P P Q T
Sbjct: 328 PA-KPPAQPSGLTKPLAQQPGTVKPPV-------QPPGTTKPPAQPLGPAKP-PAQQTGS 378
Query: 337 S--SSRGPGPMA 346
SS PGP A
Sbjct: 379 EKPSSEQPGPKA 390
>gi|239752992 PREDICTED: hypothetical protein XP_002345322 [Homo
sapiens]
Length = 277
Score = 50.8 bits (120), Expect = 2e-06
Identities = 58/203 (28%), Positives = 80/203 (39%), Gaps = 20/203 (9%)
Query: 159 PRSTGAAFARPRVAHSR-GRPPAEVEGAPPLPGKDDGSPKEA---EERARRFRKPLLPPG 214
PR G A + R A R G+ + P + GSPK A E A P P
Sbjct: 41 PRQAGLALSPQRAASPRLGKAAGPSRNSSPRAFRGRGSPKFAGAVRESAEDGEGPFSSPW 100
Query: 215 WSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREAS 274
SPRTT P + + G GR+ Q QG + A+E P Q+RGR S +
Sbjct: 101 NSPRTT-PKAALSSRAGSGRIGERQGTQGKKKK----AQEGTPVCQTRGRSPSRTSFHGE 155
Query: 275 TSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKP---SAPEENTSAPSPT 331
T P + P P P +++ + S T PR +P +A ++ SP
Sbjct: 156 TQIPGAPEGRKP--PSCPGKDQRDINYKSSGT------PRSLEPDEGAASWASSPVCSPV 207
Query: 332 QSTRGSSSRGPGPMAGMLQLHSP 354
Q R S S G + + Q P
Sbjct: 208 QGKRPSPSPGAISFSSVHQQSQP 230
>gi|239747550 PREDICTED: hypothetical protein XP_002347647 [Homo
sapiens]
Length = 277
Score = 50.8 bits (120), Expect = 2e-06
Identities = 58/203 (28%), Positives = 80/203 (39%), Gaps = 20/203 (9%)
Query: 159 PRSTGAAFARPRVAHSR-GRPPAEVEGAPPLPGKDDGSPKEA---EERARRFRKPLLPPG 214
PR G A + R A R G+ + P + GSPK A E A P P
Sbjct: 41 PRQAGLALSPQRAASPRLGKAAGPSRNSSPRAFRGRGSPKFAGAVRESAEDGEGPFSSPW 100
Query: 215 WSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREAS 274
SPRTT P + + G GR+ Q QG + A+E P Q+RGR S +
Sbjct: 101 NSPRTT-PKAALSSRAGSGRIGERQGTQGKKKK----AQEGTPVCQTRGRSPSRTSFHGE 155
Query: 275 TSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKP---SAPEENTSAPSPT 331
T P + P P P +++ + S T PR +P +A ++ SP
Sbjct: 156 TQIPGAPEGRKP--PSCPGKDQRDINYKSSGT------PRSLEPDEGAASWASSPVCSPV 207
Query: 332 QSTRGSSSRGPGPMAGMLQLHSP 354
Q R S S G + + Q P
Sbjct: 208 QGKRPSPSPGAISFSSVHQQSQP 230
>gi|239741424 PREDICTED: hypothetical protein XP_002342197 [Homo
sapiens]
Length = 277
Score = 50.8 bits (120), Expect = 2e-06
Identities = 58/203 (28%), Positives = 80/203 (39%), Gaps = 20/203 (9%)
Query: 159 PRSTGAAFARPRVAHSR-GRPPAEVEGAPPLPGKDDGSPKEA---EERARRFRKPLLPPG 214
PR G A + R A R G+ + P + GSPK A E A P P
Sbjct: 41 PRQAGLALSPQRAASPRLGKAAGPSRNSSPRAFRGRGSPKFAGAVRESAEDGEGPFSSPW 100
Query: 215 WSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREAS 274
SPRTT P + + G GR+ Q QG + A+E P Q+RGR S +
Sbjct: 101 NSPRTT-PKAALSSRAGSGRIGERQGTQGKKKK----AQEGTPVCQTRGRSPSRTSFHGE 155
Query: 275 TSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKP---SAPEENTSAPSPT 331
T P + P P P +++ + S T PR +P +A ++ SP
Sbjct: 156 TQIPGAPEGRKP--PSCPGKDQRDINYKSSGT------PRSLEPDEGAASWASSPVCSPV 207
Query: 332 QSTRGSSSRGPGPMAGMLQLHSP 354
Q R S S G + + Q P
Sbjct: 208 QGKRPSPSPGAISFSSVHQQSQP 230
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 50.4 bits (119), Expect = 2e-06
Identities = 63/265 (23%), Positives = 92/265 (34%), Gaps = 37/265 (13%)
Query: 98 KHKYKMSAIQEMAKMMKHSSPSKGLPLMSKHNKAP-GPQLSKGQQTLSVGHHA-----DK 151
KH+ A EM + S ++P GP+ +G Q + G A
Sbjct: 1734 KHRKGRQAEGEMGSARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVLRGRTV 1793
Query: 152 AVTLGGCPRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKP-- 209
PR+ PR + PP + A P P ++R+R +P
Sbjct: 1794 IYVPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAK-----VPSPGQQRSRSLHRPAK 1848
Query: 210 ---LLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQ 266
L PR+ P + + S+ Q P S LP R++PP TQ+ G L
Sbjct: 1849 TSELATLSQPPRSATPPARL------AKTPSSSSSQTSPASQPLP-RKRPPVTQAAGALP 1901
Query: 267 SPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTS 326
P A +PA T ++ K + P R + + P R P P +
Sbjct: 1902 GPGASPVPKTPARTLLAKQHKTQRSPVR------------IPFMQRPARRGP--PPLARA 1947
Query: 327 APSPTQSTRGSSSRGPGPMAGMLQL 351
P P R + GPG G L L
Sbjct: 1948 VPEPGPRGRAGTEAGPGARGGRLGL 1972
Score = 33.5 bits (75), Expect = 0.30
Identities = 37/135 (27%), Positives = 53/135 (39%), Gaps = 20/135 (14%)
Query: 212 PPGWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQ-SRGRLQSPCA 270
P G SPR P C + + + PR PAR++PP + S G + P
Sbjct: 2021 PQGASPRRGRPALPAVFLCS----SRCEELRAAPRQGPAPARQRPPAARPSPG--ERPAR 2074
Query: 271 REASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSP 330
R S SP+ P RP+ R + P +SV R+P +AP+
Sbjct: 2075 RTTSESPSRLPVRAPAARPE--TVKRYASLPHISVA---------RRPDGAV--PAAPAS 2121
Query: 331 TQSTRGSSSRGPGPM 345
+ R SS P P+
Sbjct: 2122 ADAARRSSDGEPRPL 2136
Score = 31.6 bits (70), Expect = 1.2
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 167 ARPRVAHSRGRPPAEVEGAPPLPGKDDG-SPKEAEERARRFRKPLLP 212
+ P H RGR PA + P G+D SP+ AEE +R LP
Sbjct: 1592 SEPPAVHPRGREPAVTKDPGPGGGRDSSPSPRAAEELLQRCISSALP 1638
Score = 29.6 bits (65), Expect = 4.4
Identities = 50/181 (27%), Positives = 67/181 (37%), Gaps = 27/181 (14%)
Query: 148 HADKAVTLG-GCPRSTGAAFARPRVAHSRGRPP---AEVEGAPPLPGKDDGSPKE----- 198
H KA G +S GA R + GRPP A+ +G+ P + DG+ +
Sbjct: 1441 HRHKAGGAGRSAEQSRGAGKNRAGLELPLGRPPSAPADKDGSKPGRTRGDGALQSLCLTT 1500
Query: 199 -AEERARRFR---KPLLPPGWSP-----RTTDPGQEVQADCGGGRLASAQLPQGLPRSAG 249
EE F PP +P RT+ + + GR A P +A
Sbjct: 1501 PTEEAVYCFYGNDSDEEPPAAAPTPTHRRTSAIPRAFTRERPQGR-KEAPAPSKAAPAAP 1559
Query: 250 LPAREQP-------PPTQSRGRLQSPCAR-EASTSPALTPRSQYPKRPQGPARNRGSCSP 301
PAR QP PP S S + E S PA+ PR + P + P G S
Sbjct: 1560 PPARTQPSLIADETPPCYSLSSSASSLSEPEPSEPPAVHPRGREPAVTKDPGPGGGRDSS 1619
Query: 302 P 302
P
Sbjct: 1620 P 1620
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 50.1 bits (118), Expect = 3e-06
Identities = 51/196 (26%), Positives = 68/196 (34%), Gaps = 25/196 (12%)
Query: 156 GGCPRSTGAAFARPRVAHSRGRPPA---EVEGAPPLPGKDDGSPKEAEERARRFRKPLLP 212
G P+ + R +G PP + +G PP PGK G P + R P
Sbjct: 79 GPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNR---------P 129
Query: 213 PGWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCARE 272
G P G Q D + PQG P G + PPP G+ Q P +
Sbjct: 130 QGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPP---GKPQGPPPQG 186
Query: 273 ASTSPALTPRSQYPKRPQGPA----RNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAP 328
P P +PQGP ++R S SPP +G +P P P
Sbjct: 187 GKKPQGPPP----PGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGG--NQPQGPPPPPGKP 240
Query: 329 SPTQSTRGSSSRGPGP 344
G+ +GP P
Sbjct: 241 QGPPPQGGNKPQGPPP 256
Score = 49.3 bits (116), Expect = 5e-06
Identities = 51/184 (27%), Positives = 68/184 (36%), Gaps = 19/184 (10%)
Query: 169 PRVAHSRGRPPA---EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDP--G 223
P +G PP + +G PP PGK G P + ++ R P PPG P+ P G
Sbjct: 52 PPPGKPQGPPPQGGNKPQGPPP-PGKPQGPPPQGDKS----RSPRSPPG-KPQGPPPQGG 105
Query: 224 QEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRS 283
+ Q G PQG P G + PPP + +G P + S SP P
Sbjct: 106 NQPQ-----GPPPPPGKPQGPPPQGGNRPQGPPPPGKPQG---PPPQGDKSRSPRSPPGK 157
Query: 284 QYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPG 343
PQG + +G PP +G + + P P P SS PG
Sbjct: 158 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPG 217
Query: 344 PMAG 347
G
Sbjct: 218 KPQG 221
Score = 48.1 bits (113), Expect = 1e-05
Identities = 46/173 (26%), Positives = 61/173 (35%), Gaps = 35/173 (20%)
Query: 183 EGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQ 242
+G PP PGK G P + + P G P G Q D + PQ
Sbjct: 48 QGPPPPPGKPQGPPPQGGNK---------PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ 98
Query: 243 GLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPP 302
G P G + PPP G+ Q P + + P P +PQGP PP
Sbjct: 99 GPPPQGGNQPQGPPPPP---GKPQGPPPQGGNRPQGPPP----PGKPQGP--------PP 143
Query: 303 LSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLHSPR 355
+G + R P +P P P G+ +GP P G Q P+
Sbjct: 144 --------QGDKSRSPRSPPGKPQGPPP---QGGNQPQGPPPPPGKPQGPPPQ 185
Score = 48.1 bits (113), Expect = 1e-05
Identities = 55/205 (26%), Positives = 76/205 (37%), Gaps = 32/205 (15%)
Query: 156 GGCPRSTGAAFARPRVAHSRGRPPA---EVEGAPPLPGKDDGSPKEAEERARRFRKPLLP 212
G P+ + R +G PP + +G PP PGK G P + ++ + P P
Sbjct: 140 GPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKP 199
Query: 213 PGWSPR-------TTDPGQEVQADCGGGRLASAQ-----LPQGLPRSAGLPAREQPPPTQ 260
G P+ + PG+ GG PQG P G + PPP
Sbjct: 200 QGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP-- 257
Query: 261 SRGRLQSPCAREASTS-PALTPRSQYPKRPQGPARNRGS--CSPPLSVTLAVTEGPRLRK 317
G+ Q P A+ S S A +P P +PQGP + G+ PP G ++
Sbjct: 258 --GKPQGPPAQGGSKSQSARSP----PGKPQGPPQQEGNNPQGPP------PPAGGNPQQ 305
Query: 318 PSAPEENTSAPSPTQSTRGSSSRGP 342
P AP P G SR P
Sbjct: 306 PQAPPAGQPQGPPRPPQGGRPSRPP 330
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 48.9 bits (115), Expect = 7e-06
Identities = 47/177 (26%), Positives = 64/177 (36%), Gaps = 13/177 (7%)
Query: 169 PRVAHSRGRPPA---EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQE 225
P +G PP + +G PP PGK G P + + ++R R P P P G +
Sbjct: 134 PPPGKPQGPPPQGGNKPQGPPP-PGKPQGPPPQGDNKSRSSRSPPGKPQGPP--PQGGNQ 190
Query: 226 VQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQY 285
Q G PQG P G + PPP + +G P S S P
Sbjct: 191 PQ-----GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG--PPPQGDNKSQSARSPPGKPQ 243
Query: 286 PKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGP 342
PQG + +G PP +G + P P P ++ SSR P
Sbjct: 244 GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSP 300
Score = 48.5 bits (114), Expect = 9e-06
Identities = 47/175 (26%), Positives = 63/175 (36%), Gaps = 20/175 (11%)
Query: 175 RGRPPA---EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCG 231
+G PP + +G PP PGK G P + + P G P G Q D
Sbjct: 58 QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK---------PQGPPPPGKPQGPPPQGDKS 108
Query: 232 GGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPK--RP 289
+ PQG P G + PPP G+ Q P + P P P+ P
Sbjct: 109 RSPRSPPGKPQGPPPQGGNQPQGPPPPP---GKPQGP-PPQGGNKPQGPPPPGKPQGPPP 164
Query: 290 QGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGP 344
QG ++R S SPP +G +P P P G+ +GP P
Sbjct: 165 QGDNKSRSSRSPPGKPQGPPPQGG--NQPQGPPPPPGKPQGPPPQGGNKPQGPPP 217
Score = 46.2 bits (108), Expect = 5e-05
Identities = 49/187 (26%), Positives = 71/187 (37%), Gaps = 24/187 (12%)
Query: 175 RGRPPA---EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCG 231
+G PP + +G PP PGK G P + + + P P G P+ + Q ++ G
Sbjct: 181 QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPG 240
Query: 232 ---GGRLASAQLPQGLPRSAGLPAREQPPPTQSR--------GRLQSPCAREASTSPALT 280
G PQG P G P + PPP G+ Q P + S S +
Sbjct: 241 KPQGPPPQGGNQPQGPPPPPGKP--QGPPPQGGNKPQGPPPPGKPQGPPPQGGSKS--RS 296
Query: 281 PRSQYPKRPQGPA-----RNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTR 335
RS P +PQGP + +G PP +G + P P P ++
Sbjct: 297 SRSP-PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSK 355
Query: 336 GSSSRGP 342
S+R P
Sbjct: 356 SRSARSP 362
Score = 45.4 bits (106), Expect = 8e-05
Identities = 52/180 (28%), Positives = 68/180 (37%), Gaps = 28/180 (15%)
Query: 169 PRVAHSRGRPPA---EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQE 225
P +G PP + +G PP PGK G P + ++R R P P P G +
Sbjct: 258 PPPGKPQGPPPQGGNKPQGPPP-PGKPQGPPPQGGSKSRSSRSPPGKPQGPP--PQGGNQ 314
Query: 226 VQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTS-PALTPRSQ 284
Q G PQG P G + PPP G+ Q P + S S A +P
Sbjct: 315 PQ-----GPPPPPGKPQGPPPQGGNKPQGPPPP----GKPQGPPPQGGSKSRSARSP--- 362
Query: 285 YPKRPQGPARNRGS--CSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGP 342
P +PQGP + G+ PP G ++P AP P G SR P
Sbjct: 363 -PGKPQGPPQQEGNNPQGPP------PPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 415
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 48.5 bits (114), Expect = 9e-06
Identities = 56/205 (27%), Positives = 79/205 (38%), Gaps = 22/205 (10%)
Query: 169 PRVAHSRGRPPA---EVEGAPPLPGKDDGSPKEAEERAR-RFRKPLLPPGWSPRTTDPGQ 224
P GRPP + +G PP PGK +G P + +++ +P P G P+ G
Sbjct: 52 PPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQ---GGN 108
Query: 225 EVQADCGGGRLASAQLPQGLPRSAGLPAR----EQPPP---TQSRGRLQSPCAREASTSP 277
+ Q PQG +S G P R E PPP QS+G P + P
Sbjct: 109 QSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRP-GKPEGPPP 167
Query: 278 ALTPRSQ----YPKRPQGPARNRGSCSPPLSVTLAVTEGPRLR---KPSAPEENTSAPSP 330
+SQ +P +P+GP G+ S EGP + + P P
Sbjct: 168 QGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEG 227
Query: 331 TQSTRGSSSRGPGPMAGMLQLHSPR 355
S G+ +GP P G Q P+
Sbjct: 228 PPSQGGNKPQGPPPHPGKPQGPPPQ 252
Score = 48.5 bits (114), Expect = 9e-06
Identities = 54/199 (27%), Positives = 75/199 (37%), Gaps = 32/199 (16%)
Query: 169 PRVAHSRGRPPA---EVEGAPPLPGKDDGSPKEAEERAR----RFRKPLLPPGWSPRTTD 221
PR G PP + +G PP PGK +G P + +++ R KP PP
Sbjct: 73 PRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPP------PQ 126
Query: 222 PGQEVQADCGGGRLASAQLPQGLPRSAGLPAR----EQPPP---TQSR------GRLQSP 268
G + Q PQG +S G P R E PPP QS+ G+ + P
Sbjct: 127 GGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGP 186
Query: 269 CAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLR---KPSAPEENT 325
+ + S PR P +P+GP G+ S EGP + KP P +
Sbjct: 187 PPQGGNQSQGPPPR---PGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHP 243
Query: 326 SAPSPTQSTRGSSSRGPGP 344
P G+ + P P
Sbjct: 244 GKPQGPPPQEGNKPQRPPP 262
Score = 45.4 bits (106), Expect = 8e-05
Identities = 48/160 (30%), Positives = 59/160 (36%), Gaps = 41/160 (25%)
Query: 169 PRVAHSRGRPPA---EVEGAPPLPGKDDGSPKEAEERAR----RFRKPLLPP-------- 213
PR G PP + +G PP PGK +G P + +++ R KP PP
Sbjct: 157 PRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQ 216
Query: 214 GWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREA 273
G PR P E GG + PQG P G P Q PP Q + Q P
Sbjct: 217 GPPPRPGKP--EGPPSQGGNK------PQGPPPHPGKP---QGPPPQEGNKPQRPPP--- 262
Query: 274 STSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGP 313
P RPQGP G+ PL +GP
Sbjct: 263 ------------PGRPQGPPPPGGNPQQPLPPPAGKPQGP 290
Score = 43.5 bits (101), Expect = 3e-04
Identities = 53/195 (27%), Positives = 74/195 (37%), Gaps = 32/195 (16%)
Query: 176 GRPPA---EVEGAPPLPGKDDGSPKEAEERAR----RFRKPLLPPGWSPRTTDPGQEVQA 228
GR P + + PP PGK +G P + +++ R KP PP G + Q
Sbjct: 38 GRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPP------PQGGNQSQG 91
Query: 229 DCGGGRLASAQLPQGLPRSAGLPAR----EQPPP---TQSR------GRLQSPCAREAST 275
Q PQG +S G P R E PPP QS+ G+ + P + +
Sbjct: 92 PPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQ 151
Query: 276 SPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLR---KPSAPEENTSAPSPTQ 332
S PR P +P+GP G+ S EGP + + P P
Sbjct: 152 SQGPPPR---PGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPP 208
Query: 333 STRGSSSRGPGPMAG 347
G+ S+GP P G
Sbjct: 209 PQGGNQSQGPPPRPG 223
Score = 35.8 bits (81), Expect = 0.061
Identities = 33/126 (26%), Positives = 40/126 (31%), Gaps = 11/126 (8%)
Query: 241 PQGL-PRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRG-- 297
P+G P+ P R PPP + GR P S P P PQG +++G
Sbjct: 36 PEGRRPQGGNQPQRTPPPPGKPEGR--PPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP 93
Query: 298 ------SCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQL 351
PP + PR KP P S R GP P G
Sbjct: 94 PRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQ 153
Query: 352 HSPRLP 357
P P
Sbjct: 154 GPPPRP 159
Score = 35.4 bits (80), Expect = 0.080
Identities = 30/97 (30%), Positives = 35/97 (36%), Gaps = 21/97 (21%)
Query: 169 PRVAHSRGRPPA---EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQE 225
PR G P + +G PP PGK G P + + +R P P G P PG
Sbjct: 220 PRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPP----PGGN 275
Query: 226 VQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSR 262
Q Q LP AG P PPP R
Sbjct: 276 PQ--------------QPLPPPAGKPQGPPPPPQGGR 298
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 48.1 bits (113), Expect = 1e-05
Identities = 52/214 (24%), Positives = 77/214 (35%), Gaps = 18/214 (8%)
Query: 159 PRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWS-- 216
P S AA A S P +GA P P + +PK+ ++R F+K G+S
Sbjct: 116 PGSPTAAEGEAASAASSTSSPKAEDGATPSPSNE--TPKKKKKRFS-FKKSFKLSGFSFK 172
Query: 217 --PRTTDPGQEVQADC---------GGGRLASAQLPQGLPRSAGLPAREQPPPTQSR--G 263
+ G E +A GG A+A+ A P E + G
Sbjct: 173 KNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGG 232
Query: 264 RLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEE 323
Q +EA+ +P P S K + P++ + + A E P P AP E
Sbjct: 233 DPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPE 292
Query: 324 NTSAPSPTQSTRGSSSRGPGPMAGMLQLHSPRLP 357
+AP+ + +SS P SP P
Sbjct: 293 QEAAPAEEPAAAAASSACAAPSQEAQPECSPEAP 326
>gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 47.4 bits (111), Expect = 2e-05
Identities = 54/203 (26%), Positives = 81/203 (39%), Gaps = 39/203 (19%)
Query: 183 EGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQ 242
+G PP G K R R P +P S + P Q+ A G R+++ Q +
Sbjct: 71 DGIPPRSCVSCGEEKPLVPR-RGASSPQIPLNISGSSEPPPQKGDAKLKGVRMSTLQTAE 129
Query: 243 GLPRSAGLPAREQ--------PPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGP-- 292
PR+ P R++ PPP +G +RE + + + PR Y + P GP
Sbjct: 130 TKPRTPTCPRRQRRWLRTTPHPPPPTRQG------SREMAGAFLVAPRPPYSRSPGGPES 183
Query: 293 ARNRGSCSPPL---------------SVTLAVTEGPRLRKPSAPEENTSAPSPTQ----- 332
A S P L +V GPRL +P+ P + PS ++
Sbjct: 184 APTPASVLPELRRGKQDLLSADSGLPAVDQGEVAGPRL-QPAQPLRPGAVPSASRARAPD 242
Query: 333 STRGSSSRGPGPMAGMLQ-LHSP 354
+ G+ +R P P A L+ HSP
Sbjct: 243 TKAGTRARDPAPGASQLRAAHSP 265
Score = 32.3 bits (72), Expect = 0.67
Identities = 50/202 (24%), Positives = 71/202 (35%), Gaps = 38/202 (18%)
Query: 154 TLGGCPRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPP 213
T G GA PR +SR P E AP +P RR ++ LL
Sbjct: 155 TRQGSREMAGAFLVAPRPPYSRS--PGGPESAP--------TPASVLPELRRGKQDLLSA 204
Query: 214 GWSPRTTDPGQEVQADCGGGRLASAQ-LPQGLPRSAGLPAREQPPPTQSRGRLQSPCARE 272
D G+ G RL AQ L G SA +R + P T++ R + P
Sbjct: 205 DSGLPAVDQGE-----VAGPRLQPAQPLRPGAVPSA---SRARAPDTKAGTRARDPAPGA 256
Query: 273 ASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQ 332
+ A +P R G A +PP +P P+EN +A +
Sbjct: 257 SQLRAAHSPH-----RGGGGAPRTQLAAPP--------------RPPLPQENAAAGLASC 297
Query: 333 STRGSSSRGPGPMAGMLQLHSP 354
S ++ P P+ G + P
Sbjct: 298 SASCAAVPPPPPLRGSVGAELP 319
>gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 47.4 bits (111), Expect = 2e-05
Identities = 54/203 (26%), Positives = 81/203 (39%), Gaps = 39/203 (19%)
Query: 183 EGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQ 242
+G PP G K R R P +P S + P Q+ A G R+++ Q +
Sbjct: 71 DGIPPRSCVSCGEEKPLVPR-RGASSPQIPLNISGSSEPPPQKGDAKLKGVRMSTLQTAE 129
Query: 243 GLPRSAGLPAREQ--------PPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGP-- 292
PR+ P R++ PPP +G +RE + + + PR Y + P GP
Sbjct: 130 TKPRTPTCPRRQRRWLRTTPHPPPPTRQG------SREMAGAFLVAPRPPYSRSPGGPES 183
Query: 293 ARNRGSCSPPL---------------SVTLAVTEGPRLRKPSAPEENTSAPSPTQ----- 332
A S P L +V GPRL +P+ P + PS ++
Sbjct: 184 APTPASVLPELRRGKQDLLSADSGLPAVDQGEVAGPRL-QPAQPLRPGAVPSASRARAPD 242
Query: 333 STRGSSSRGPGPMAGMLQ-LHSP 354
+ G+ +R P P A L+ HSP
Sbjct: 243 TKAGTRARDPAPGASQLRAAHSP 265
Score = 32.3 bits (72), Expect = 0.67
Identities = 50/202 (24%), Positives = 71/202 (35%), Gaps = 38/202 (18%)
Query: 154 TLGGCPRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPP 213
T G GA PR +SR P E AP +P RR ++ LL
Sbjct: 155 TRQGSREMAGAFLVAPRPPYSRS--PGGPESAP--------TPASVLPELRRGKQDLLSA 204
Query: 214 GWSPRTTDPGQEVQADCGGGRLASAQ-LPQGLPRSAGLPAREQPPPTQSRGRLQSPCARE 272
D G+ G RL AQ L G SA +R + P T++ R + P
Sbjct: 205 DSGLPAVDQGE-----VAGPRLQPAQPLRPGAVPSA---SRARAPDTKAGTRARDPAPGA 256
Query: 273 ASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQ 332
+ A +P R G A +PP +P P+EN +A +
Sbjct: 257 SQLRAAHSPH-----RGGGGAPRTQLAAPP--------------RPPLPQENAAAGLASC 297
Query: 333 STRGSSSRGPGPMAGMLQLHSP 354
S ++ P P+ G + P
Sbjct: 298 SASCAAVPPPPPLRGSVGAELP 319
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 47.0 bits (110), Expect = 3e-05
Identities = 60/199 (30%), Positives = 71/199 (35%), Gaps = 25/199 (12%)
Query: 161 STGAAFARPRVAHSRGRPPAEVEGAPPLPGK--DDGSPKEAEERARRFRKPLLPPG--WS 216
S+ AAF P+ RGR P V G PG G P R PL PPG
Sbjct: 192 SSRAAF--PQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGP 249
Query: 217 PRTTDPGQEVQADCGGGRLASAQLPQ---------GLPRSAGLPAREQPPPTQSRGRLQS 267
P PGQ + G + P G P LP PPP G
Sbjct: 250 PGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPP-GPPPPVPGYGPPPG 308
Query: 268 PCAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTS- 326
P + P P +P RP GP + +PP + P P AP N +
Sbjct: 309 PPPPQQGPPP---PPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAP----PPAPHVNPAF 361
Query: 327 APSPTQSTRGSS-SRGPGP 344
P PT S +S SRGP P
Sbjct: 362 FPPPTNSGMPTSDSRGPPP 380
>gi|110227615 echinoderm microtubule associated protein like 3 [Homo
sapiens]
Length = 896
Score = 47.0 bits (110), Expect = 3e-05
Identities = 50/177 (28%), Positives = 69/177 (38%), Gaps = 33/177 (18%)
Query: 178 PPAEVEGA--PPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRL 235
PP+ ++G+ P PG +P P LPP +P G + + + L
Sbjct: 49 PPSSLQGSGTPAPPGDSLAAP------------PGLPPTCTPSLVSRGTQTETEV---EL 93
Query: 236 ASAQLPQGLPRSAGLP--AREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPA 293
S+ P GL P A E+P TQS G S + P + Q P+R P
Sbjct: 94 KSSPGPPGLSNGPPAPQGASEEPSGTQSEGGGSSSSGAGSPGPPGILRPLQPPQRADTPR 153
Query: 294 RNRGSCSPPLSVTLAVTEGPR--LRKPSAPEENTSAPSPTQSTRG-----SSSRGPG 343
RN S S P +E PR L + + N S + +RG SS GPG
Sbjct: 154 RNSSSSSSP-------SERPRQKLSRKAISSANLLVRSGSTESRGGKDPLSSPGGPG 203
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 46.6 bits (109), Expect = 3e-05
Identities = 55/198 (27%), Positives = 72/198 (36%), Gaps = 26/198 (13%)
Query: 151 KAVTLGGCPRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPL 210
+ + L G P +G P+ HS + EG GSP E + P
Sbjct: 477 QTLALAGSPAPSG----HPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPS-----PA 527
Query: 211 LPPGWSPRTTD---PGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQS 267
P G P + PG G S G PR AG PA ++P + S S
Sbjct: 528 GPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG-PRPAG-PAGDEPAESPSETPGPS 585
Query: 268 PCAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPE----- 322
P A PA +P RP GPA + + SP + T GPR P+ E
Sbjct: 586 P-AGPTRDEPAESPSETPGPRPAGPAGDEPAESP------SETPGPRPAGPAGDEPAESP 638
Query: 323 ENTSAPSPTQSTRGSSSR 340
T PSP TR ++
Sbjct: 639 SETPGPSPAGPTRDEPAK 656
Score = 37.7 bits (86), Expect = 0.016
Identities = 65/249 (26%), Positives = 86/249 (34%), Gaps = 47/249 (18%)
Query: 123 PLMSKHNKAPGPQLSKGQQT------LSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRG 176
PL K +K +LS+ +Q S A+ L GC S G+ R G
Sbjct: 376 PLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSL--RTGTQEVGG 433
Query: 177 RPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLA 236
+ P E P ++ R+ RK G S G + A LA
Sbjct: 434 QDPGEAVQPCRQP-----LGARVADKVRKRRKVDEGAGDSAAVASGGAQTLA------LA 482
Query: 237 SAQLPQGLPRSAGLP------------AREQPPPTQSRGRLQSPCAREASTSPALTPRSQ 284
+ P G P++ +E P + S SP A A PA +P
Sbjct: 483 GSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSP-AGPAGDEPAESPSET 541
Query: 285 YPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPE-----ENTSAPSPTQSTRG--- 336
RP GPA + + SP + T GPR P+ E T PSP TR
Sbjct: 542 PGPRPAGPAGDEPAESP------SETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPA 595
Query: 337 -SSSRGPGP 344
S S PGP
Sbjct: 596 ESPSETPGP 604
Score = 35.8 bits (81), Expect = 0.061
Identities = 56/194 (28%), Positives = 74/194 (38%), Gaps = 21/194 (10%)
Query: 137 SKGQQTLSV-GHHADKAVTLGGCPRSTGAAFARPRVAHSRGRP--PAEVEGAPPL-PGKD 192
S G QTL++ G A G + R G P P+E G P P D
Sbjct: 473 SGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGD 532
Query: 193 DGSPKEAEERARRFRKPLLP-PGWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLP 251
+ + +E R P P SP T PG G S G P AG P
Sbjct: 533 EPAESPSETPGPRPAGPAGDEPAESPSET-PGPRPAGPAGDEPAESPSETPG-PSPAG-P 589
Query: 252 AREQPP--PTQSRG-RLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLA 308
R++P P+++ G R P E + SP+ TP RP GPA + + SP +
Sbjct: 590 TRDEPAESPSETPGPRPAGPAGDEPAESPSETPGP----RPAGPAGDEPAESP------S 639
Query: 309 VTEGPRLRKPSAPE 322
T GP P+ E
Sbjct: 640 ETPGPSPAGPTRDE 653
>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 46.2 bits (108), Expect = 5e-05
Identities = 68/217 (31%), Positives = 84/217 (38%), Gaps = 47/217 (21%)
Query: 156 GGCPRST--GAAFARPR---VAHSRG-RPPAEVEGAPPLPGKDDGSPKEAEERARRFRKP 209
GG P + GA +PR +A G R P +V GAP G P R R P
Sbjct: 83 GGLPGAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRAHLTGGPP-------RRRPP 135
Query: 210 LLPPGWS-PRTTDPGQEVQADCGGGRL----ASAQLPQGLP--RSAGL---------PAR 253
L P + PG ++ D RL ASA+LP+GLP +AGL P
Sbjct: 136 RLAAAHGLPASEAPG--LRPDSARTRLRLRLASARLPRGLPPAPAAGLWRAGCTRLRPLL 193
Query: 254 EQPPPTQSRGRLQSPCAR---EASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVT 310
QPPP S G QSP + PA +P P P PA S P +T
Sbjct: 194 LQPPPMLSPGLAQSPGVELHARTLSLPAPSPAPCLPP-PAPPAARTPSAHSPAHTHFTLT 252
Query: 311 EGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAG 347
E +T A +P RG PGP+ G
Sbjct: 253 ---------LAEAHTRALTP---ARGGGEGDPGPIVG 277
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 46.2 bits (108), Expect = 5e-05
Identities = 46/197 (23%), Positives = 69/197 (35%), Gaps = 24/197 (12%)
Query: 157 GCPRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWS 216
G P + A P+ G ++GAP P SPK P+ PP +
Sbjct: 1055 GAPTTPAATLPSPK----GGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPM-PPAAT 1109
Query: 217 PRTTDPGQEVQADCGGGRLASAQLPQ-----GLPRSAGLPAREQPPPTQSRGRLQSPCAR 271
P + G G +A P P G P P +G L +P +
Sbjct: 1110 PPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPK 1169
Query: 272 EASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPT 331
A T+PA TP S PK +G+ + P + P +P+ + PSP
Sbjct: 1170 GAPTTPAATPPS--PKGGLATPSPKGAPTTPAAT------------PPSPKGGLATPSPK 1215
Query: 332 QSTRGSSSRGPGPMAGM 348
+ ++ P P G+
Sbjct: 1216 GAPTTPAATPPSPKGGL 1232
Score = 42.4 bits (98), Expect = 7e-04
Identities = 48/184 (26%), Positives = 67/184 (36%), Gaps = 28/184 (15%)
Query: 175 RGRPPAEV--EGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGG 232
+G P A +GAP P SPK P PP +P + G + G
Sbjct: 1044 KGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPT-PPAATPPSPKGGPATPSPKGA 1102
Query: 233 GRLASAQLPQ-----GLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPK 287
+A P P G P P +G L +P + A T+PA TP S
Sbjct: 1103 PMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPS---- 1158
Query: 288 RPQGPARNRGSCSPP---LSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGP 344
P+G G +PP T A T P +P+ + PSP + ++ P P
Sbjct: 1159 -PKG-----GLATPPPKGAPTTPAAT-------PPSPKGGLATPSPKGAPTTPAATPPSP 1205
Query: 345 MAGM 348
G+
Sbjct: 1206 KGGL 1209
Score = 42.0 bits (97), Expect = 9e-04
Identities = 69/265 (26%), Positives = 93/265 (35%), Gaps = 48/265 (18%)
Query: 120 KGLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPP 179
K P S P SKG TL AVT P S A +VA S
Sbjct: 1444 KKAPATSAPKGGPATPSSKGDPTLP-------AVT----PPSPKEPPAPKQVATSSSPKK 1492
Query: 180 AEVE----GAPPLPGKDDGSPKEAEERARRFRKPLLPPGW-----SPRTTDPGQEVQADC 230
A GAP LP SPKE R P+ P +P T P + +
Sbjct: 1493 APATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPA 1552
Query: 231 ----GGGRLASAQLPQGLPRSAGLPAREQPP---PTQSRGR-----------LQSPCARE 272
+ + P+ P + PP P+ +G + SP +E
Sbjct: 1553 MTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKE 1612
Query: 273 ASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPT- 331
A T PA+TP S K P PA SPP VT P++P T T
Sbjct: 1613 APTPPAVTPPSP-EKGPATPAPKGTPTSPP------VTPSSLKDSPTSPASVTCKMGATV 1665
Query: 332 -QSTRG-SSSRGPGPMAGMLQLHSP 354
Q+++G + +GP + +L +P
Sbjct: 1666 PQASKGLPAKKGPTALKEVLVAPAP 1690
Score = 41.2 bits (95), Expect = 0.001
Identities = 60/241 (24%), Positives = 89/241 (36%), Gaps = 38/241 (15%)
Query: 119 SKGLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRP 178
SKG P + P P + + H A+T R P + +G P
Sbjct: 1356 SKGGPTTPSSKEGPTPPAA------TPSHKGGPAMTPPSPKRG-------PAIPSPKGDP 1402
Query: 179 --PAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLA 236
PA + P P K +P E A + L PP +P + A GG
Sbjct: 1403 TSPAVI---PLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATP 1459
Query: 237 SAQLPQGLPRSAGLPAREQPPPTQ------SRGRLQSPCAREASTSPALTPRSQYPKR-P 289
S++ LP +E P P Q + +P A T PA+ P S PK P
Sbjct: 1460 SSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSS--PKEVP 1517
Query: 290 QGPARNRGSCSPPLSV-------TLAVTEG---PRLRKPSAPEENTSAPSPTQSTRGSSS 339
P+ R +P ++ TLA E P + PS P++ + P+P ++ SS
Sbjct: 1518 ATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPS-PKKTPAIPTPKEAPATPSS 1576
Query: 340 R 340
+
Sbjct: 1577 K 1577
Score = 40.4 bits (93), Expect = 0.002
Identities = 49/162 (30%), Positives = 63/162 (38%), Gaps = 29/162 (17%)
Query: 183 EGAPPLPGKDDGSPKEAEERARRFRKPLLP-PGWSPRTTDPGQEVQADCGGGRLASAQLP 241
+GAP P SPK P P P W+P T P + GG S P
Sbjct: 937 KGAPTPPAATPPSPKGG---------PATPSPKWAP--TPPAATPPSPKGGPATPS---P 982
Query: 242 QGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPK-RPQGPARNRGSCS 300
+G P PA P P +G +P + A T PA+TP S PK P +G+ +
Sbjct: 983 KGAPTP---PAATPPSP---KGGPATPSPKGAPTPPAVTPPS--PKGSPAATPFPKGAST 1034
Query: 301 PPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGP 342
PP A T P+A AP+ +T S GP
Sbjct: 1035 PP-----AATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGP 1071
Score = 40.4 bits (93), Expect = 0.002
Identities = 66/243 (27%), Positives = 84/243 (34%), Gaps = 52/243 (21%)
Query: 120 KGLPLMSKHNKAPGPQLSKGQQT---LSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRG 176
KG P AP P + L+ H T P S A P
Sbjct: 1091 KGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATP------- 1143
Query: 177 RPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLA 236
PP +GAP P SPK PP +P T P + GG
Sbjct: 1144 -PP---KGAPTTPAATPPSPKGGLATP--------PPKGAPTT--PAATPPSPKGGLATP 1189
Query: 237 SAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPK------RPQ 290
S P+G P + PA P P +G L +P + A T+PA TP S PK P+
Sbjct: 1190 S---PKGAPTT---PAATPPSP---KGGLATPSPKGAPTTPAATPPS--PKGGLATPSPK 1238
Query: 291 G---------PARNRGSCSPPL--SVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSS 339
G P+ G +PP + T P L+ A + AP+P T S
Sbjct: 1239 GAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPK 1298
Query: 340 RGP 342
GP
Sbjct: 1299 GGP 1301
Score = 40.0 bits (92), Expect = 0.003
Identities = 51/203 (25%), Positives = 72/203 (35%), Gaps = 34/203 (16%)
Query: 157 GCPRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWS 216
G P A P+ + P +GAP P SPK A F K P
Sbjct: 984 GAPTPPAATPPSPKGGPATPSP----KGAPTPPAVTPPSPK-GSPAATPFPKGASTP--- 1035
Query: 217 PRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTS 276
P T P + G A+ LP+G P + PA P P +G +P + A T
Sbjct: 1036 PAATPPSPK-------GSPAATPLPKGAPTT---PAATLPSP---KGGPATPSLKGAPTP 1082
Query: 277 PALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEG-----------PRLRKPSAPEENT 325
PA TP S PK +G+ PP + + G P +P+
Sbjct: 1083 PAATPPS--PKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGL 1140
Query: 326 SAPSPTQSTRGSSSRGPGPMAGM 348
+ P P + ++ P P G+
Sbjct: 1141 ATPPPKGAPTTPAATPPSPKGGL 1163
Score = 39.7 bits (91), Expect = 0.004
Identities = 49/186 (26%), Positives = 65/186 (34%), Gaps = 16/186 (8%)
Query: 169 PRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPL---LP-PGWSPRTTDPGQ 224
P HS P +GAP SPK + P LP P P T P Q
Sbjct: 850 PATTHSP--TPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQ 907
Query: 225 EVQADCGGGRLASAQL---PQGLPRSAGLPAREQPP---PTQSRGRLQSPCAREASTSPA 278
A+ P+G+P S PP P +G +P + A T PA
Sbjct: 908 APALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPA 967
Query: 279 LTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSS 338
TP S PK +G+ +PP + + GP P + P S +GS
Sbjct: 968 ATPPS--PKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPP--SPKGSP 1023
Query: 339 SRGPGP 344
+ P P
Sbjct: 1024 AATPFP 1029
Score = 37.7 bits (86), Expect = 0.016
Identities = 48/189 (25%), Positives = 67/189 (35%), Gaps = 21/189 (11%)
Query: 157 GCPRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWS 216
G P + A P+ + P +GAP P SPK P PP +
Sbjct: 1216 GAPTTPAATPPSPKGGLATPSP----KGAPTTPAATPPSPKGGPATPPPKGAPT-PPAAT 1270
Query: 217 PRTTDPGQEVQADCGGGRLA--SAQLPQGLPRSA---GLPAREQPPPTQSRGRLQSPCAR 271
P + G G A + P+G P ++ G P P +G +P +
Sbjct: 1271 PPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK 1330
Query: 272 EASTSPALTPRS---------QYPKRPQGPARNRGSCSP-PLSVTLAVTEGPRLRKPSAP 321
A T PA+TP S P GP P P + T + GP + PS P
Sbjct: 1331 GAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPS-P 1389
Query: 322 EENTSAPSP 330
+ + PSP
Sbjct: 1390 KRGPAIPSP 1398
Score = 34.7 bits (78), Expect = 0.14
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 245 PRSAGLPAREQPPPTQSRGRL--QSPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPP 302
P+ LP +E P P+ + P +PAL+ S PK+ + +G P
Sbjct: 875 PKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGI---P 931
Query: 303 LSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAG 347
S + P P +P+ + PSP + ++ P P G
Sbjct: 932 ASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGG 976
Score = 34.3 bits (77), Expect = 0.18
Identities = 40/162 (24%), Positives = 57/162 (35%), Gaps = 19/162 (11%)
Query: 187 PLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQ-GLP 245
P P G+P + + LPP +P + + G A Q P +
Sbjct: 856 PTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKE-GPATPAPKQAPALSMT 914
Query: 246 RSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSV 305
S+ AR P P +G SP + A T PA TP P GPA +P
Sbjct: 915 SSSPKKARATPAP---KGIPASPSPKGAPTPPAATP----PSPKGGPATPSPKWAPT--- 964
Query: 306 TLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAG 347
P P +P+ + PSP + ++ P P G
Sbjct: 965 -------PPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGG 999
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 45.8 bits (107), Expect = 6e-05
Identities = 69/261 (26%), Positives = 89/261 (34%), Gaps = 59/261 (22%)
Query: 132 PGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGK 191
PGPQ G L++G G P +G +A G+P G P LPG+
Sbjct: 2011 PGPQ---GPPGLALGER--------GPPGPSG-------LAGEPGKP-----GIPGLPGR 2047
Query: 192 -----DDGSPKEAEERARRFRK-------PLLPPGWSPRTTDPGQEVQADCGGGRLASAQ 239
+ G P E ER + + P PG PG +V D G L+ Q
Sbjct: 2048 AGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSGEQ 2107
Query: 240 LPQGLPRSAGLPA-------------------REQPPPTQSRGRLQSPCAREASTSPALT 280
P GL + G P R +P P G P R P
Sbjct: 2108 GPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGER-GMAGPEGK 2166
Query: 281 PRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSR 340
P Q P+ P GP G PP + LA GP+ E + P T + +
Sbjct: 2167 PGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGAV 2226
Query: 341 G----PGPMAGMLQLHSPRLP 357
G PGP + SP LP
Sbjct: 2227 GLPGPPGPSGLVGPQGSPGLP 2247
Score = 30.8 bits (68), Expect = 2.0
Identities = 54/222 (24%), Positives = 74/222 (33%), Gaps = 24/222 (10%)
Query: 119 SKGLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVT-LGGCPRSTGAAFARPR------- 170
S+GLP ++ A GP+ G G +K G P G A A P+
Sbjct: 1505 SRGLPGVAGRPGAKGPEGPPGP----TGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVG 1560
Query: 171 VAHSRGRPPAEVEGAPP---LPGKDDGSPKEAEERARRFRKPLLPPGWSP---RTTDPGQ 224
A RG + E PP LPG + PPG S DPG+
Sbjct: 1561 PAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGR 1620
Query: 225 EVQADCGGGRLASAQL----PQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTS-PAL 279
G R ++ +G P GLP + + ++ P + P
Sbjct: 1621 PGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGE 1680
Query: 280 TPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAP 321
R+ P GP +RG PP V GP R+ P
Sbjct: 1681 DGRNGSPGS-SGPKGDRGEPGPPGPPGRLVDTGPGAREKGEP 1721
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 45.8 bits (107), Expect = 6e-05
Identities = 51/179 (28%), Positives = 70/179 (39%), Gaps = 28/179 (15%)
Query: 186 PPLPGKDDGSP--KEAEERARRFRKP---LLPPGWSPRTTDPGQEVQADCGGGRLASAQL 240
PP G G P KE + F P + P R PGQ V+ + RL A+
Sbjct: 1706 PPAIGGQPGPPAKKEGAKMPTNFVAPTVKMAAPTSEGRPLKPGQYVKPNF---RLTEAEA 1762
Query: 241 PQGLPRSAGLPAREQPPPTQSRGR---------LQSPCAREASTSPALTPRSQYPKRPQG 291
P + P + QPP + S GR +P +R AS S A + S R G
Sbjct: 1763 PPSVA-----PRQAQPPQSLSLGRPRQAPVPPASHAPASRSASLSRAFSLASADLLRASG 1817
Query: 292 PARNRGSCSPPLSVTLAV----TEGPRLRKPSAPEENTSA--PSPTQSTRGSSSRGPGP 344
P + L A+ T L+ P+ P ++ A +P GSS +GPGP
Sbjct: 1818 PEACKQESPQKLGAPEALGGRETGSHTLQSPAPPSSHSLARERTPLVGKAGSSCQGPGP 1876
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 45.4 bits (106), Expect = 8e-05
Identities = 52/195 (26%), Positives = 75/195 (38%), Gaps = 25/195 (12%)
Query: 168 RPRVAHSRGRPPAEVEG---APPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQ 224
+P+V+ G+ A G +PP PG + +R + SPRT DP
Sbjct: 667 KPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTP 726
Query: 225 EVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAR-EASTSPALTPRS 283
G A+A PR+ AR P P + GR +SP R EA++ A R
Sbjct: 727 RPP---GLPEEATALAAPSPPRAR---ARAAPRPLGAHGRRRSPAKRAEAASMLAADVR- 779
Query: 284 QYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGS-SSRGP 342
G R+ G L +GPR KP+ P++ + P R ++ P
Sbjct: 780 -------GKTRSLGRAEVALGA-----QGPR-EKPAPPQKAKRSVPPASPARAPPATETP 826
Query: 343 GPMAGMLQLHSPRLP 357
GP L +P P
Sbjct: 827 GPEKAATDLPAPETP 841
Score = 28.5 bits (62), Expect = 9.7
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 11/114 (9%)
Query: 159 PRSTGAAFARPRVAHSRGRPPAE-VEGAPPLPGKDDGSPK-----EAEERARRFRKPLLP 212
PR+ A RP AH R R PA+ E A L G + E A+ R+ P
Sbjct: 744 PRARARAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAP 803
Query: 213 PGWSPRTTDPGQEVQA----DCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSR 262
P + R+ P +A + G A+ LP P ++PP +SR
Sbjct: 804 PQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETPRKKTPI-QKPPRKKSR 856
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 45.4 bits (106), Expect = 8e-05
Identities = 52/195 (26%), Positives = 75/195 (38%), Gaps = 25/195 (12%)
Query: 168 RPRVAHSRGRPPAEVEG---APPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQ 224
+P+V+ G+ A G +PP PG + +R + SPRT DP
Sbjct: 662 KPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTP 721
Query: 225 EVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAR-EASTSPALTPRS 283
G A+A PR+ AR P P + GR +SP R EA++ A R
Sbjct: 722 RPP---GLPEEATALAAPSPPRAR---ARAAPRPLGAHGRRRSPAKRAEAASMLAADVR- 774
Query: 284 QYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGS-SSRGP 342
G R+ G L +GPR KP+ P++ + P R ++ P
Sbjct: 775 -------GKTRSLGRAEVALGA-----QGPR-EKPAPPQKAKRSVPPASPARAPPATETP 821
Query: 343 GPMAGMLQLHSPRLP 357
GP L +P P
Sbjct: 822 GPEKAATDLPAPETP 836
Score = 28.5 bits (62), Expect = 9.7
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 11/114 (9%)
Query: 159 PRSTGAAFARPRVAHSRGRPPAE-VEGAPPLPGKDDGSPK-----EAEERARRFRKPLLP 212
PR+ A RP AH R R PA+ E A L G + E A+ R+ P
Sbjct: 739 PRARARAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAP 798
Query: 213 PGWSPRTTDPGQEVQA----DCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSR 262
P + R+ P +A + G A+ LP P ++PP +SR
Sbjct: 799 PQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETPRKKTPI-QKPPRKKSR 851
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 45.1 bits (105), Expect = 1e-04
Identities = 53/195 (27%), Positives = 75/195 (38%), Gaps = 22/195 (11%)
Query: 149 ADKAVTLGGCPRSTGAAFARP-RVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFR 207
A++A +GG A A P R A + R PA PP G+ + +P
Sbjct: 59 AERAGGIGGATIPESAPRAGPTRSAGTSSRNPAS---RPPASGRGERAPPAKNTSPG--- 112
Query: 208 KPLLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQS 267
P+ PG + TT PG Q G R+++ + AR + R L +
Sbjct: 113 -PVSSPGRASGTTRPGPLGQK---GLRISAEETV----------ARGKATEAPKRSALSA 158
Query: 268 PCAREASTSPALTPRSQYPKRPQGPARNRGSCSP-PLSVTLAVTEGPRLRKPSAPEENTS 326
R+ S TP +R + G P P + TEGPR SA E +T+
Sbjct: 159 GARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTT 218
Query: 327 APSPTQSTRGSSSRG 341
PSP R S+ G
Sbjct: 219 EPSPAARRRPSAGGG 233
Score = 38.5 bits (88), Expect = 0.009
Identities = 54/191 (28%), Positives = 69/191 (36%), Gaps = 35/191 (18%)
Query: 167 ARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEV 226
A P ++ S PP + PPL K + P L SP + PGQ
Sbjct: 487 ASPPMSPSATPPP---QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAP 543
Query: 227 QADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYP 286
+ SA LP P + P Q PP + LQ P SP +P Q P
Sbjct: 544 FSP-------SASLPMS-PLATPPP---QAPPVLAAPLLQVP------PSPPASPTLQAP 586
Query: 287 KRPQGPARNRGSCSPPLSVTLAVTEGP----------RLRKPSAPEENTSAPSPTQSTRG 336
+RP P + P L TLA+ GP L P ++SA S + RG
Sbjct: 587 RRPPTPGPDTSVSGPRL--TLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRG 644
Query: 337 SSSRGPGPMAG 347
S GP G
Sbjct: 645 YDS---GPEGG 652
Score = 37.0 bits (84), Expect = 0.027
Identities = 64/251 (25%), Positives = 84/251 (33%), Gaps = 35/251 (13%)
Query: 114 KHSSPSKGLPLMSKHNKAPGPQL---SKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPR 170
K ++P+ G PL S P P S+ TL H+ C +T A P
Sbjct: 290 KDAAPALG-PLSSSPLATPSPSAALQSQAPPTLPATPHSSSLT----CQLATPLPLAPP- 343
Query: 171 VAHSRGRPPA-EVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQAD 229
S PP+ + +PP + + L P SP T P Q A
Sbjct: 344 ---SPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPAL 400
Query: 230 CGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAR-----EASTSPALTPRSQ 284
L Q P P S L P P Q+P A +A SP +P Q
Sbjct: 401 A----LPPLQAPPSPPASPPLSPLATPSP-------QAPNALAVHLLQAPFSPPPSPPVQ 449
Query: 285 YPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGP 344
P P S +PP ++ P PS P +PS T + P P
Sbjct: 450 APFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSAT-----PPPQAPPP 504
Query: 345 MAG-MLQLHSP 354
+A LQL P
Sbjct: 505 LAAPPLQLAKP 515
Score = 32.0 bits (71), Expect = 0.88
Identities = 41/136 (30%), Positives = 53/136 (38%), Gaps = 30/136 (22%)
Query: 227 QADCGGGRLASAQLPQGL--PRSAGLPAREQPPPTQSRGRL--------QSPCAREA--- 273
+A G A GL PR G P R PP T + R+ + P A A
Sbjct: 7 KAKAGAAARTPAARAPGLLTPRPPGSP-RPPPPVTPAALRVLGAAGAVGRKPLAERAGGI 65
Query: 274 --STSPALTPRSQYPKRPQGPARNRGSCSP-PLSVTLAVTEGPRLRKPSAPEENTSAPSP 330
+T P PR+ GP R+ G+ S P S A G R AP ++P P
Sbjct: 66 GGATIPESAPRA-------GPTRSAGTSSRNPASRPPASGRGER-----APPAKNTSPGP 113
Query: 331 TQST-RGSSSRGPGPM 345
S R S + PGP+
Sbjct: 114 VSSPGRASGTTRPGPL 129
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 45.1 bits (105), Expect = 1e-04
Identities = 53/195 (27%), Positives = 75/195 (38%), Gaps = 22/195 (11%)
Query: 149 ADKAVTLGGCPRSTGAAFARP-RVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFR 207
A++A +GG A A P R A + R PA PP G+ + +P
Sbjct: 59 AERAGGIGGATIPESAPRAGPTRSAGTSSRNPAS---RPPASGRGERAPPAKNTSPG--- 112
Query: 208 KPLLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQS 267
P+ PG + TT PG Q G R+++ + AR + R L +
Sbjct: 113 -PVSSPGRASGTTRPGPLGQK---GLRISAEETV----------ARGKATEAPKRSALSA 158
Query: 268 PCAREASTSPALTPRSQYPKRPQGPARNRGSCSP-PLSVTLAVTEGPRLRKPSAPEENTS 326
R+ S TP +R + G P P + TEGPR SA E +T+
Sbjct: 159 GARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTT 218
Query: 327 APSPTQSTRGSSSRG 341
PSP R S+ G
Sbjct: 219 EPSPAARRRPSAGGG 233
Score = 43.5 bits (101), Expect = 3e-04
Identities = 56/199 (28%), Positives = 72/199 (36%), Gaps = 32/199 (16%)
Query: 159 PRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPR 218
P + +A PRV PP +V +PP K + P L SP
Sbjct: 745 PPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPP 804
Query: 219 TTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPA 278
+ PGQ + SA LP P + P Q PP + LQ P SP
Sbjct: 805 ASFPGQAPFSP-------SASLPMS-PLATPPP---QAPPVLAAPLLQVP------PSPP 847
Query: 279 LTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGP----------RLRKPSAPEENTSAP 328
+P Q P+RP P + P L TLA+ GP L P ++SA
Sbjct: 848 ASPTLQAPRRPPTPGPDTSVSGPRL--TLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT 905
Query: 329 SPTQSTRGSSSRGPGPMAG 347
S + RG S GP G
Sbjct: 906 STPEELRGYDS---GPEGG 921
Score = 39.3 bits (90), Expect = 0.006
Identities = 61/237 (25%), Positives = 83/237 (35%), Gaps = 34/237 (14%)
Query: 120 KGLPLMSKHNKAPGPQLSKGQQT-LSVGHHADKAVTLGGCP--------RSTGAAFARPR 170
KGL + ++ A G +++ LS G D + G P R+ G PR
Sbjct: 132 KGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPR 191
Query: 171 VAHS-RGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQAD 229
A S R RPP E P S E + R+ G R A
Sbjct: 192 PAPSARPRPPTE----GPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSAT 247
Query: 230 CGGGRLASAQLPQGLPRSAGLPAREQP-------PPTQSRGRLQS-PCAREASTSPALTP 281
S +G PR+ P++ +P PP + R + P S+SP TP
Sbjct: 248 PLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATP 307
Query: 282 RSQYPK-RPQGPARNRGSC-------SPPLSVTLAVTEGPRLRKPSAPEENTSAPSP 330
K RP P N + SPPL+ L + PSAP + PSP
Sbjct: 308 SPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPP----SPSAPPSLQTLPSP 360
Score = 37.7 bits (86), Expect = 0.016
Identities = 63/231 (27%), Positives = 78/231 (33%), Gaps = 39/231 (16%)
Query: 116 SSPS-KGLPLMSKHNKAPGPQLSKGQQTLSVGH----HADKAVTLGGCPRSTGAAFARPR 170
S PS +G P H P P KG Q L D A LG P S+ + A P
Sbjct: 255 SGPSARGTPRAPAHPSQPKP---KGLQALRPPQVTPPRKDAAPALG--PLSS-SPLATPS 308
Query: 171 VAHSRGRP-PAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGW----SPRTTDPGQE 225
+ ++ RP P A PLP SP A P PP SP T P Q
Sbjct: 309 PSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQA 368
Query: 226 VQADCGGGRLASAQL----PQGLPRSAGLPAREQPPPTQSRGRLQ--------------- 266
+ A L P +P S P+ + PP + LQ
Sbjct: 369 PPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHS 428
Query: 267 ----SPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGP 313
SP +AS + P S P P A SPPL +L+ P
Sbjct: 429 FLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSP 479
Score = 34.3 bits (77), Expect = 0.18
Identities = 50/181 (27%), Positives = 64/181 (35%), Gaps = 22/181 (12%)
Query: 169 PRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQA 228
P+ + PP + +PPL P+ A LPP +P P
Sbjct: 592 PQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLA-------LPPLQAP----PSPPASP 640
Query: 229 DCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREAS--TSPALTPRSQYP 286
S Q P L L A PPP+ +Q+P + AS SP+ TP SQ P
Sbjct: 641 PLSPLATPSPQAPNALAVHL-LQAPFSPPPSPP---VQAPFSPPASPPVSPSATPPSQAP 696
Query: 287 KRPQGPARN---RGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPG 343
P SPP+S + T P+ P A PSP S S S P
Sbjct: 697 PSLAAPPLQVPPSPPASPPMSP--SATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPP 754
Query: 344 P 344
P
Sbjct: 755 P 755
Score = 33.1 bits (74), Expect = 0.40
Identities = 72/274 (26%), Positives = 91/274 (33%), Gaps = 57/274 (20%)
Query: 132 PGP-QLSKGQQTLSVGHHADKAVT--LGGCPRSTGAAFARPRVAHSRGRPPAEVEGAPPL 188
P P LS Q T S+G +A L PR T A+ P RP + +PPL
Sbjct: 404 PSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSP------SRPASTPPDSPPL 457
Query: 189 PGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLA------------ 236
A + P + P SP T P Q + + A
Sbjct: 458 QAP---LSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLET 514
Query: 237 -SAQLPQGL---PRSAGLPAREQ-----PPPTQSRGR-----------LQSPCAREASTS 276
S+ P L P S P E PPP Q+ +PC +A S
Sbjct: 515 QSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPS 574
Query: 277 PALTPRSQYPKR-----PQGPAR-----NRGSCSPPLSVTLAVTEGPRLRKPSAPEENTS 326
P TP + P PQ P +G SPPLS T P+ A +
Sbjct: 575 PLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSP--LATPPPQAPPXLALPPLQA 632
Query: 327 APSPTQSTRGSSSRGPGPMA-GMLQLHSPRLPCS 359
PSP S S P P A L +H + P S
Sbjct: 633 PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFS 666
Score = 32.7 bits (73), Expect = 0.52
Identities = 41/172 (23%), Positives = 57/172 (33%), Gaps = 6/172 (3%)
Query: 159 PRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPR 218
P +T A P +A + P +PPL SP+ A LL +SP
Sbjct: 613 PLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVH----LLQAPFSPP 668
Query: 219 TTDPGQEVQADCGGGRLASAQLP--QGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTS 276
+ P Q + ++ + P Q P A P + P P S S +
Sbjct: 669 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 728
Query: 277 PALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAP 328
P P Q P P S +PP V + P PS P +P
Sbjct: 729 PLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSP 780
Score = 32.0 bits (71), Expect = 0.88
Identities = 41/136 (30%), Positives = 53/136 (38%), Gaps = 30/136 (22%)
Query: 227 QADCGGGRLASAQLPQGL--PRSAGLPAREQPPPTQSRGRL--------QSPCAREA--- 273
+A G A GL PR G P R PP T + R+ + P A A
Sbjct: 7 KAKAGAAARTPAARAPGLLTPRPPGSP-RPPPPVTPAALRVLGAAGAVGRKPLAERAGGI 65
Query: 274 --STSPALTPRSQYPKRPQGPARNRGSCSP-PLSVTLAVTEGPRLRKPSAPEENTSAPSP 330
+T P PR+ GP R+ G+ S P S A G R AP ++P P
Sbjct: 66 GGATIPESAPRA-------GPTRSAGTSSRNPASRPPASGRGER-----APPAKNTSPGP 113
Query: 331 TQST-RGSSSRGPGPM 345
S R S + PGP+
Sbjct: 114 VSSPGRASGTTRPGPL 129
Score = 29.6 bits (65), Expect = 4.4
Identities = 49/189 (25%), Positives = 61/189 (32%), Gaps = 23/189 (12%)
Query: 178 PPAEVEGAPP-LPGKDDGSPKEAEERARRFRKPLLP-PGWSPRTTDPGQEVQADCGGGRL 235
PP+ + PP P P +A LP P SP T P Q L
Sbjct: 572 PPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLA----L 627
Query: 236 ASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAR-----EASTSPALTPRSQYPKRPQ 290
Q P P S L P P Q+P A +A SP +P Q P P
Sbjct: 628 PPLQAPPSPPASPPLSPLATPSP-------QAPNALAVHLLQAPFSPPPSPPVQAPFSPP 680
Query: 291 GPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQ 350
S +PP ++ P PS P +PS T + P P+A
Sbjct: 681 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSAT-----PPPQAPPPLAAPPL 735
Query: 351 LHSPRLPCS 359
P P S
Sbjct: 736 QVPPSPPAS 744
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 45.1 bits (105), Expect = 1e-04
Identities = 51/189 (26%), Positives = 68/189 (35%), Gaps = 23/189 (12%)
Query: 107 QEMAKMMKHSSPSKGLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAF 166
QE + + +P P + P P K Q G + + G P+
Sbjct: 25 QEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 84
Query: 167 ARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEV 226
+ R S PP + +G PP GK G P + KP PP P Q
Sbjct: 85 DKSRSPRS---PPGKPQGPPPQGGKPQGPPPQGG------NKPQGPPPPGKPQGPPAQ-- 133
Query: 227 QADCGGGRLASAQLPQGLPRSAGLPARE----QPPPTQSRGRLQSPCAREAS--TSPALT 280
GG + SA+ P G P+ G P +E Q PP + G Q P A A P
Sbjct: 134 ----GGSKSQSARSPPGKPQ--GPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRP 187
Query: 281 PRSQYPKRP 289
P+ P RP
Sbjct: 188 PQGGRPSRP 196
Score = 45.1 bits (105), Expect = 1e-04
Identities = 48/175 (27%), Positives = 57/175 (32%), Gaps = 34/175 (19%)
Query: 183 EGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQ 242
+G PP PGK G P + + P G P G Q D + PQ
Sbjct: 48 QGPPPPPGKPQGPPPQGGNK---------PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ 98
Query: 243 GLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPP 302
G P G P Q PP Q + Q P P +PQGP GS S
Sbjct: 99 GPPPQGGKP---QGPPPQGGNKPQGPPP---------------PGKPQGPPAQGGSKSQS 140
Query: 303 LSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGPMAGMLQLHSPRLP 357
+GP P N P P G+ + P AG Q PR P
Sbjct: 141 ARSPPGKPQGP----PQQEGNNPQGPPPPAG--GNPQQPQAPPAGQPQ-GPPRPP 188
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 45.1 bits (105), Expect = 1e-04
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 22/145 (15%)
Query: 214 GWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPP----PTQSRGRLQSPC 269
G S P +A + S+ + +PR+ P+RE+ P G ++P
Sbjct: 1380 GHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRT---PSRERSSSASSPEMKDGLPRTPS 1436
Query: 270 AREAS-TSPALTPRSQYPKR-------------PQGPARNRGSC-SPPLSVTLAVTEGPR 314
R S +SP L S P R P+ P+R R C S P L T PR
Sbjct: 1437 RRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPRPR 1496
Query: 315 LRKPSAPEENTSAPSPTQSTRGSSS 339
R PS+PE N +P + GS S
Sbjct: 1497 SRSPSSPELNNKCLTPQRERSGSES 1521
Score = 43.5 bits (101), Expect = 3e-04
Identities = 65/251 (25%), Positives = 88/251 (35%), Gaps = 19/251 (7%)
Query: 117 SPSKGLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRG 176
SP K S + P PQ +K + S + K G R ++ +H R
Sbjct: 408 SPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRA 467
Query: 177 RPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLA 236
+ P SP A+ R R P G S + + ++ GR
Sbjct: 468 KRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPT-KRGHSRSRSPQWRRSRSAQRWGRSR 526
Query: 237 SAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPC-AREASTSPAL-------TPRSQYPKR 288
S Q +G RS P + TQ RGR +S R S SPA TP + R
Sbjct: 527 SPQR-RGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSR 585
Query: 289 PQGPARNRGSCSPPL-----SVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPG 343
+ PAR R P S T A R R P+ T +P R S SR P
Sbjct: 586 SRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSP----VRRRSRSRSPA 641
Query: 344 PMAGMLQLHSP 354
+G + +P
Sbjct: 642 RRSGRSRSRTP 652
Score = 40.4 bits (93), Expect = 0.002
Identities = 70/304 (23%), Positives = 105/304 (34%), Gaps = 53/304 (17%)
Query: 100 KYKMSAIQEMAKMMKHSSPSKGLPLMSKHNK-------APGPQLSKGQQTLSVGHHADKA 152
K K + +K KH SP+ SK K P P+ + ++ S AD A
Sbjct: 214 KKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTS----ADSA 269
Query: 153 VTLGGCPRSTGAAFARPRVAHSRGRPPAEVEG---------------------APPLPGK 191
+ + +A A+ GR P+ G +P K
Sbjct: 270 SSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATK 329
Query: 192 DDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQE------VQADCGGGR---LASAQLPQ 242
SP E +++ ++ K P SP + G E + A+ GG LA+ L Q
Sbjct: 330 QPSSPYEDKDKDKK-EKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQ 388
Query: 243 GL--PRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQY-------PKRPQGPA 293
P S P R++ PP QS + + SP T S++ PK P
Sbjct: 389 EPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPG 448
Query: 294 RNRGSCSPPLSVTLAVTEGPRLRKPS-APEENTS-APSPTQSTRGSSSRGPGPMAGMLQL 351
+R S P S + R + S P + SP + RG S G +
Sbjct: 449 SHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRS 508
Query: 352 HSPR 355
SP+
Sbjct: 509 RSPQ 512
Score = 39.7 bits (91), Expect = 0.004
Identities = 55/258 (21%), Positives = 86/258 (33%), Gaps = 32/258 (12%)
Query: 100 KYKMSAIQEMAKMMKHSSPSKGLPLMSKHNKAPGPQLSKGQQTLSVGHHADKAVTLGGCP 159
K S ++ K K S ++ P S + GP+ L+ H GG P
Sbjct: 329 KQPSSPYEDKDKDKKEKSATRPSP--SPERSSTGPEPPAPTPLLAERH--------GGSP 378
Query: 160 RSTGAAFARPRVAHSRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPR- 218
+ A ++ PP+E P +D PK E+ + PP P
Sbjct: 379 QP----LATTPLSQEPVNPPSEAS-----PTRDRSPPKSPEKLPQSSSSESSPPSPQPTK 429
Query: 219 -----TTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQP---PPTQSRGRLQSPCA 270
++ P A G + P RS G R++ P++ GR +SP
Sbjct: 430 VSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPAT 489
Query: 271 REASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAP----EENTS 326
+ S + TP + R + P R + + + R R P P NT
Sbjct: 490 AKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQ 549
Query: 327 APSPTQSTRGSSSRGPGP 344
++S R S P
Sbjct: 550 RRGRSRSARRGRSHSRSP 567
Score = 36.6 bits (83), Expect = 0.036
Identities = 47/184 (25%), Positives = 68/184 (36%), Gaps = 23/184 (12%)
Query: 174 SRGRPPAEVEGAPPLPGKDDGSPKEAEERAR-RFRKPLLPPGWSPRTTDPGQEVQADCGG 232
SRGR +E + +P PK + R R R P P + T + ++
Sbjct: 1474 SRGR--SECDSSP--------EPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSV 1523
Query: 233 GRLASAQLPQGLPRSAGLPAREQPPPT---QSRGRLQSPCAREASTSPALTPRSQYPKRP 289
+ A+ P G +G P+ Q R S +A T L RS+ P
Sbjct: 1524 DQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSP 1583
Query: 290 Q-------GPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPS--PTQSTRGSSSR 340
+ P R+R SP + + S+PE AP P +S GSSS+
Sbjct: 1584 EVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSK 1643
Query: 341 GPGP 344
G GP
Sbjct: 1644 GRGP 1647
Score = 35.8 bits (81), Expect = 0.061
Identities = 48/191 (25%), Positives = 73/191 (38%), Gaps = 21/191 (10%)
Query: 170 RVAHSRGRPPAEVEGAPP--LPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQ 227
R SR R PA G P + S R R + L+ G S T P + +
Sbjct: 665 RRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRT-PQRRGR 723
Query: 228 ADCGGGRLASAQLPQGLPRSAGLPAREQPPPTQSRGR-LQSPCAREAS----------TS 276
+ R ++ Q RS P ++ + R R L SP ++ S +S
Sbjct: 724 SGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSS 783
Query: 277 PALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRG 336
P +SQ P P R+R S P + + T R R S+P + +P++ +
Sbjct: 784 PCPKQKSQTP-----PRRSRSGSSQPKAKSR--TPPRRSRSSSSPPPKQKSKTPSRQSHS 836
Query: 337 SSSRGPGPMAG 347
SSS P +G
Sbjct: 837 SSSPHPKVKSG 847
Score = 33.1 bits (74), Expect = 0.40
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Query: 191 KDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQ-EVQADCGGGRLASAQLPQGLPR--- 246
+ + SP+ + R R L SPR+ + ++ G Q Q PR
Sbjct: 742 RSNSSPEMKKSRISSRRSRSLS---SPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSR 798
Query: 247 --SAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQ---YPKRPQGPARNRGSCSP 301
S+ A+ + PP +SR SP ++ S +P+ S +PK G +GS +
Sbjct: 799 SGSSQPKAKSRTPPRRSRSS-SSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITS 857
Query: 302 PLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSS 339
P + +VT R S+P+ + +P++ + SS
Sbjct: 858 PQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSS 895
Score = 33.1 bits (74), Expect = 0.40
Identities = 60/221 (27%), Positives = 87/221 (39%), Gaps = 22/221 (9%)
Query: 128 HNKAPGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAA------FARPRV-AHSRGRPPA 180
+NK PQ + SV LG RS + A P+ + S P +
Sbjct: 1506 NNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDS 1565
Query: 181 EVEGAPPLPGKD-DGSPKEAEERARRFRKPLLPPGWSPRTTD-PGQEVQADCGGGRLASA 238
+ + PL + GS E + ++R + G SP D P +A G
Sbjct: 1566 KAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRS-GSSPEVKDKPRAAPRAQSGSDSSPEP 1624
Query: 239 QLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGS 298
+ P PR+ LP R + + S+GR SP E S+S +P ++P P+ RGS
Sbjct: 1625 KAPA--PRA--LPRRSRSG-SSSKGRGPSP---EGSSSTESSP--EHP--PKSRTARRGS 1672
Query: 299 CSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSS 339
S P T + T R S+PE A +S SSS
Sbjct: 1673 RSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSS 1713
Score = 33.1 bits (74), Expect = 0.40
Identities = 53/223 (23%), Positives = 78/223 (34%), Gaps = 29/223 (13%)
Query: 139 GQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSR-GRPPAEVEGAPPLPGKDDGSPK 197
G Q+LS G A + G + + P V HS G PPA P S
Sbjct: 2471 GSQSLSSGAVATTTSSAGD--HNGMLSVPAPGVPHSDVGEPPASTGAQQP-------SAL 2521
Query: 198 EAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLPAREQPP 257
A + A+ R S ++ + G +S LP + + P
Sbjct: 2522 AALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPS 2581
Query: 258 PTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTEGPRLRK 317
PT P +EA R P P R R S S S + + +
Sbjct: 2582 PT--------PAPKEAV-------REGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSS 2626
Query: 318 PSAPEENTSAPSPTQSTRGSSSRG---PGPMAGMLQLHSPRLP 357
S+ ++S+ S + S+ SSS PGP A + + SP+ P
Sbjct: 2627 SSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQA-LPKPASPKKP 2668
Score = 32.0 bits (71), Expect = 0.88
Identities = 50/211 (23%), Positives = 71/211 (33%), Gaps = 40/211 (18%)
Query: 132 PGPQLSKGQQTLSVGHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPAEVEGAPPLPGK 191
PGP++ Q+T +HA + L S G A RPP + A L +
Sbjct: 2160 PGPRIPDHQRTSVPENHAQSRIALALTAISLGTA-----------RPPPSMSAA-GLAAR 2207
Query: 192 DDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGGRLASAQLPQGLPRSAGLP 251
P PL+ +P + A LASA+ P +P + L
Sbjct: 2208 MSQVPAPV---------PLMSLRTAPAANLASRIPAASAAAMNLASARTP-AIPTAVNL- 2256
Query: 252 AREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCSPPLSVTLAVTE 311
A + P + L SP A ++ L P+ P PA N P ++
Sbjct: 2257 ADSRTPAAAAAMNLASPRTAVAPSAVNLAD----PRTPTAPAVNLAGARTPAALAALSLT 2312
Query: 312 GPRLRKPSAPEENTSAPSPTQSTRGSSSRGP 342
G S PT + SSSR P
Sbjct: 2313 G-------------SGTPPTAANYPSSSRTP 2330
Score = 29.3 bits (64), Expect = 5.7
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 241 PQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPARNRGSCS 300
PQ R A PA E P P RE+S+S + TP+ + K+ + R S S
Sbjct: 153 PQRRAREAKQPAPEPPKPYS--------LVRESSSSRSPTPKQKKKKKKKDRGRRSESSS 204
Query: 301 P 301
P
Sbjct: 205 P 205
Score = 28.5 bits (62), Expect = 9.7
Identities = 44/171 (25%), Positives = 60/171 (35%), Gaps = 26/171 (15%)
Query: 174 SRGRPPAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTTDPGQEVQADCGGG 233
+R R P +P + + P E +RR R SPRT + G
Sbjct: 1716 TRSRTPPRHRRSPSVSSPE---PAEKSRSSRRRRSAS-----SPRTKTTSRR-------G 1760
Query: 234 RLASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPA 293
R S + P+GL RS RE+ T+ R R + +S + + R Q +
Sbjct: 1761 RSPSPK-PRGLQRSRSRSRREKTRTTRRRDR--------SGSSQSTSRRRQRSRSRSRVT 1811
Query: 294 RNRGSCSPPLSVTLAVTEGPRLRKPSAPEENTSAPSPTQSTRGSSSRGPGP 344
R R S S + A E R S S PT R S P P
Sbjct: 1812 RRRRGGSGYHSRSPARQESS--RTSSRRRRGRSRTPPTSRKRSRSRTSPAP 1860
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,949,438
Number of Sequences: 37866
Number of extensions: 1103046
Number of successful extensions: 6975
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 932
Number of HSP's that attempted gapping in prelim test: 5541
Number of HSP's gapped (non-prelim): 2061
length of query: 359
length of database: 18,247,518
effective HSP length: 103
effective length of query: 256
effective length of database: 14,347,320
effective search space: 3672913920
effective search space used: 3672913920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.