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Search of human proteins with 169168282
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169168282 PREDICTED: hypothetical protein [Homo sapiens]
(328 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169168282 PREDICTED: hypothetical protein [Homo sapiens] 700 0.0
gi|169168103 PREDICTED: hypothetical protein [Homo sapiens] 679 0.0
gi|169167521 PREDICTED: hypothetical protein [Homo sapiens] 555 e-158
gi|58761506 sarcoma antigen NY-SAR-48 isoform b [Homo sapiens] 35 0.070
gi|58761504 sarcoma antigen NY-SAR-48 isoform a [Homo sapiens] 35 0.070
gi|56788370 pleckstrin and Sec7 domain containing 4 [Homo sapiens] 33 0.35
gi|68989256 ras inhibitor RIN1 [Homo sapiens] 33 0.45
gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein... 32 0.59
gi|84626580 hypothetical protein LOC80178 [Homo sapiens] 32 1.0
gi|167004110 methyltransferase-like protein 1 isoform c [Homo sa... 31 1.3
gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens] 31 1.7
gi|190343023 ATP-binding cassette, sub-family C, member 6 isofor... 30 2.3
gi|91822911 JAZF zinc finger 1 [Homo sapiens] 30 2.3
gi|239756495 PREDICTED: hypothetical protein [Homo sapiens] 30 2.3
gi|89191830 hypothetical protein LOC388969 [Homo sapiens] 30 2.9
gi|50409939 aftiphilin protein isoform a [Homo sapiens] 30 3.8
gi|170932501 triggering receptor expressed on myeloid cells-like... 30 3.8
gi|4503591 erythropoietin receptor precursor [Homo sapiens] 29 5.0
gi|21265043 ADAM metallopeptidase with thrombospondin type 1 mot... 29 5.0
gi|73695936 ADAM metallopeptidase with thrombospondin type 1 mot... 29 5.0
gi|21265034 ADAM metallopeptidase with thrombospondin type 1 mot... 29 5.0
gi|110815807 zinc finger protein 169 [Homo sapiens] 29 5.0
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 29 6.6
gi|21361499 SUMO1/sentrin/SMT3 specific protease 3 [Homo sapiens] 29 6.6
gi|239752100 PREDICTED: hypothetical protein [Homo sapiens] 28 8.6
gi|239746604 PREDICTED: similar to Keratin-associated protein 10... 28 8.6
gi|42733592 hypothetical protein LOC399693 [Homo sapiens] 28 8.6
>gi|169168282 PREDICTED: hypothetical protein [Homo sapiens]
Length = 328
Score = 700 bits (1806), Expect = 0.0
Identities = 328/328 (100%), Positives = 328/328 (100%)
Query: 1 MIGCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAHFLVLIPTSIILQP 60
MIGCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAHFLVLIPTSIILQP
Sbjct: 1 MIGCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAHFLVLIPTSIILQP 60
Query: 61 WTSHPSDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 120
WTSHPSDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP
Sbjct: 61 WTSHPSDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 120
Query: 121 FLTIYWRQGLGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSS 180
FLTIYWRQGLGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSS
Sbjct: 121 FLTIYWRQGLGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSS 180
Query: 181 QQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLS 240
QQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLS
Sbjct: 181 QQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLS 240
Query: 241 GFFPYYRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPS 300
GFFPYYRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPS
Sbjct: 241 GFFPYYRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPS 300
Query: 301 QGCCGPWSKVSLVGSTDTAGRLSCSSPA 328
QGCCGPWSKVSLVGSTDTAGRLSCSSPA
Sbjct: 301 QGCCGPWSKVSLVGSTDTAGRLSCSSPA 328
>gi|169168103 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 679 bits (1753), Expect = 0.0
Identities = 328/370 (88%), Positives = 328/370 (88%), Gaps = 42/370 (11%)
Query: 1 MIGCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAH------------- 47
MIGCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAH
Sbjct: 1 MIGCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAHVHQAAGGTATARL 60
Query: 48 -----------------------------FLVLIPTSIILQPWTSHPSDWRGATEERQLK 78
FLVLIPTSIILQPWTSHPSDWRGATEERQLK
Sbjct: 61 PACPLLSVSVSRVNEVIKPGEQCAVKKLKFLVLIPTSIILQPWTSHPSDWRGATEERQLK 120
Query: 79 ASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLG 138
ASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLG
Sbjct: 121 ASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLG 180
Query: 139 IQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHL 198
IQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHL
Sbjct: 181 IQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHL 240
Query: 199 SHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLAL 258
SHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLAL
Sbjct: 241 SHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLAL 300
Query: 259 PGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDT 318
PGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDT
Sbjct: 301 PGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDT 360
Query: 319 AGRLSCSSPA 328
AGRLSCSSPA
Sbjct: 361 AGRLSCSSPA 370
>gi|169167521 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 555 bits (1431), Expect = e-158
Identities = 262/263 (99%), Positives = 262/263 (99%)
Query: 66 SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY 125
SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY
Sbjct: 28 SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY 87
Query: 126 WRQGLGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT 185
WRQGLGTELVWLGIQ AVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT
Sbjct: 88 WRQGLGTELVWLGIQDAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT 147
Query: 186 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 245
SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY
Sbjct: 148 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 207
Query: 246 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG 305
YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG
Sbjct: 208 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG 267
Query: 306 PWSKVSLVGSTDTAGRLSCSSPA 328
PWSKVSLVGSTDTAGRLSCSSPA
Sbjct: 268 PWSKVSLVGSTDTAGRLSCSSPA 290
>gi|58761506 sarcoma antigen NY-SAR-48 isoform b [Homo sapiens]
Length = 409
Score = 35.4 bits (80), Expect = 0.070
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 130 LGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRD 189
L + VW QG +F+Q C GAP + L E+D+PG S+ QAT
Sbjct: 327 LANQEVWEETQGMAPPSRWYFNQDSA-CRESGGAPKNTPLSEDDNPGASSAPAQATFISP 385
Query: 190 KKPLSS 195
+ SS
Sbjct: 386 SEDFSS 391
>gi|58761504 sarcoma antigen NY-SAR-48 isoform a [Homo sapiens]
Length = 410
Score = 35.4 bits (80), Expect = 0.070
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 130 LGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRD 189
L + VW QG +F+Q C GAP + L E+D+PG S+ QAT
Sbjct: 328 LANQEVWEETQGMAPPSRWYFNQDSA-CRESGGAPKNTPLSEDDNPGASSAPAQATFISP 386
Query: 190 KKPLSS 195
+ SS
Sbjct: 387 SEDFSS 392
>gi|56788370 pleckstrin and Sec7 domain containing 4 [Homo sapiens]
Length = 1056
Score = 33.1 bits (74), Expect = 0.35
Identities = 39/115 (33%), Positives = 46/115 (40%), Gaps = 26/115 (22%)
Query: 7 ECGPRAPGG-----GDDFWGTANQDVCSPE-LTWKLSG--PSAFTPAAHFLVLIPTSIIL 58
E P AP G GD + C E LTW+ SG S PAAH +
Sbjct: 339 EGAPAAPPGHGESEGDRLGPAPSAAPCVDEALTWE-SGCVGSDLGPAAH---------PV 388
Query: 59 QPWTS-HPSDW-RGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPW 111
QPW S P W RG Q+ + + RD G HP+E P L P PW
Sbjct: 389 QPWASLSPEGWQRGGPFWPQVTLNSQDRD-----EREG-GHPQESLPCTLAPCPW 437
>gi|68989256 ras inhibitor RIN1 [Homo sapiens]
Length = 783
Score = 32.7 bits (73), Expect = 0.45
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 164 PTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEG 223
P PSL E D P SS+++ P +S HL R + FC+ LL E
Sbjct: 306 PPMPSLQEVDCGSPSSSEEEGVPGSRGSPATSPHLGRRRPLLRSMSAAFCS---LLAPER 362
Query: 224 LVLQPKTPLQEDSELLSG 241
V + L +D +G
Sbjct: 363 QVGRAAAALMQDRHTAAG 380
>gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein)
[Homo sapiens]
Length = 480
Score = 32.3 bits (72), Expect = 0.59
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 146 GTSFFSQMCQNCDAESGAPTS-PSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQV 204
G+ FFS CQNC+A +G + SL+ D+ P Q +S R K L+S H +
Sbjct: 298 GSEFFS--CQNCEAVAGCSSGLDSLVPGDEDKPYKCQLCRSSFRYKGNLASHRTVHTGE- 354
Query: 205 ALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 245
P+ C+ C G L+ S + SG PY
Sbjct: 355 ----KPYHCSI-C-----GARFNRPANLKTHSRIHSGEKPY 385
>gi|84626580 hypothetical protein LOC80178 [Homo sapiens]
Length = 433
Score = 31.6 bits (70), Expect = 1.0
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Query: 144 TDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQ 203
TD + +Q QN SG P P + + +A + R +K S L L R +
Sbjct: 234 TDAAAAKTQFLQNMQTASGGP---------QPRLSAVEVEAEAGRLRKACSLLRLRMREE 284
Query: 204 VALEYLPFFCTYGCLLEEEGL 224
++ + + Y CLL EGL
Sbjct: 285 LSAAPMDWMQEYRCLLTLEGL 305
>gi|167004110 methyltransferase-like protein 1 isoform c [Homo
sapiens]
Length = 155
Score = 31.2 bits (69), Expect = 1.3
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 177 PLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQED 235
PL+ Q +DKK RAQ +E+ C YG LL ++ ++ P+ Q D
Sbjct: 56 PLTQNQSHDDPKDKK-------EKRAQAQVEFADIGCGYGGLLADKDVLPLPRPTFQAD 107
>gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens]
Length = 1066
Score = 30.8 bits (68), Expect = 1.7
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 158 DAESGAPT-SPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPF 211
D E G PT SPSL E D PL S+++ S + P S L + + P+
Sbjct: 814 DPEVGTPTYSPSLKELDPNQPLESKERRASDGSRSPTPSQKLGSAYLPSYHHSPY 868
>gi|190343023 ATP-binding cassette, sub-family C, member 6 isoform 1
[Homo sapiens]
Length = 1503
Score = 30.4 bits (67), Expect = 2.3
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Query: 34 WKLSGPSAFTPAAHFLVLIPTSIILQPWTSHPSDWRGATEERQLKASD 81
W+L GPSA T A FL L+P + + +H +E Q++ D
Sbjct: 445 WQLLGPSALTAIAVFLSLLPLNFFISKKRNH-------HQEEQMRQKD 485
>gi|91822911 JAZF zinc finger 1 [Homo sapiens]
Length = 243
Score = 30.4 bits (67), Expect = 2.3
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
Query: 148 SFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALE 207
SFFS C+ PT L+E + + + D + L L VAL
Sbjct: 8 SFFSNTCRFGGCGLHFPTLADLIEHIEDNHIDT--------DPRVLEKQELQQPTYVALS 59
Query: 208 YLPFFCTYGCLLEEEGL--VLQPKTPLQEDSELLSG 241
Y+ F T E+E L +QPK L S + G
Sbjct: 60 YINRFMTDAARREQESLKKKIQPKLSLTLSSSVSRG 95
>gi|239756495 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1312
Score = 30.4 bits (67), Expect = 2.3
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Query: 34 WKLSGPSAFTPAAHFLVLIPTSIILQPWTSHPSDWRGATEERQLKASD 81
W+L GPSA T A FL L+P + + +H +E Q++ D
Sbjct: 254 WQLLGPSALTAIAVFLSLLPLNFFISKKRNH-------HQEEQMRQKD 294
>gi|89191830 hypothetical protein LOC388969 [Homo sapiens]
Length = 166
Score = 30.0 bits (66), Expect = 2.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 154 CQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVA 205
C +A+SG TS + + DDPG +S + A + D +L L + ++A
Sbjct: 109 CLEYEADSGEVTSVIVYQGDDPGKVSEKVSAHTPLDPPMREALKLRIQEEIA 160
>gi|50409939 aftiphilin protein isoform a [Homo sapiens]
Length = 936
Score = 29.6 bits (65), Expect = 3.8
Identities = 43/167 (25%), Positives = 62/167 (37%), Gaps = 13/167 (7%)
Query: 78 KASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWL 137
K + G+ +SP ++ + Q L PV + W + L L G+ L+ L
Sbjct: 775 KIASIGQTATMSPDMNTCTSDQFQE--SLPPVQFDWSSSGLTNPLDASG----GSTLLNL 828
Query: 138 GIQGAVTDGTSFFSQMCQNCDAE------SGAPTSPSLLEEDDP-GPLSSQQQATSSRDK 190
G V D +S S D E S S S L+ D L S + TS+ +
Sbjct: 829 DFFGPVDDSSSSSSTTIPGVDPELYELTTSKLEISTSSLKVTDAFARLMSTVEKTSTSTR 888
Query: 191 KPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSE 237
KP HLS A + LP + L P T QE ++
Sbjct: 889 KPKREEHLSEEAIKVIAGLPDLTFMHAKVLMFPATLTPSTSSQEKAD 935
>gi|170932501 triggering receptor expressed on myeloid cells-like 2
[Homo sapiens]
Length = 321
Score = 29.6 bits (65), Expect = 3.8
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 77 LKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGN 115
LK D GR WC+ T SG+ +P + ++P P T N
Sbjct: 95 LKLQDSGRYWCMRNT-SGILYPLMGFQLDVSPAPQTERN 132
>gi|4503591 erythropoietin receptor precursor [Homo sapiens]
Length = 508
Score = 29.3 bits (64), Expect = 5.0
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 13 PGGGDDFWGT---ANQDVCSPELTWKLSGPSAFTPAAHFLVLIPTSIILQPWTSHP 65
PGG D + CS L K S A + + +L P+S +L+PWT P
Sbjct: 388 PGGSVDIVAMDEGSEASSCSSALASKPSPEGASAASFEYTILDPSSQLLRPWTLCP 443
>gi|21265043 ADAM metallopeptidase with thrombospondin type 1 motif,
13 isoform 3 preproprotein [Homo sapiens]
Length = 1340
Score = 29.3 bits (64), Expect = 5.0
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 81 DKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 120
D G + L GL P Q L P P W SLGP
Sbjct: 953 DDGEEILLDTQCQGLPRPEPQEACSLEPCPPRWKVMSLGP 992
>gi|73695936 ADAM metallopeptidase with thrombospondin type 1 motif,
13 isoform 2 preproprotein [Homo sapiens]
Length = 1371
Score = 29.3 bits (64), Expect = 5.0
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 81 DKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 120
D G + L GL P Q L P P W SLGP
Sbjct: 984 DDGEEILLDTQCQGLPRPEPQEACSLEPCPPRWKVMSLGP 1023
>gi|21265034 ADAM metallopeptidase with thrombospondin type 1 motif,
13 isoform 1 preproprotein [Homo sapiens]
Length = 1427
Score = 29.3 bits (64), Expect = 5.0
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 81 DKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 120
D G + L GL P Q L P P W SLGP
Sbjct: 984 DDGEEILLDTQCQGLPRPEPQEACSLEPCPPRWKVMSLGP 1023
>gi|110815807 zinc finger protein 169 [Homo sapiens]
Length = 603
Score = 29.3 bits (64), Expect = 5.0
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 25/134 (18%)
Query: 16 GDDFWGTANQ---DVCSPELTWKLSGPSAFTPAAHFLVLIPTSIILQPW--TSHPSDW-- 68
GD+ W N+ D+C T F P+ LV +S +L+ + + HP+
Sbjct: 69 GDEPWREENEHLLDLCPEPRT-------EFQPSFPHLVAFSSSQLLRQYALSGHPTQIFP 121
Query: 69 -RGATEERQLKA----SDKGRDWCLSPTLSGLRHPREQ------RPMQLTPVPWTWGNRS 117
A + QL+A S+KG S LR + P Q PV W GNR
Sbjct: 122 SSSAGGDFQLEAPRCSSEKGESGETEGPDSSLRKRPSRISRTFFSPHQGDPVEWVEGNRE 181
Query: 118 LGPFLTIYWRQGLG 131
G L + R LG
Sbjct: 182 GGTDLRLAQRMSLG 195
>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
Length = 123
Score = 28.9 bits (63), Expect = 6.6
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 3 GCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAHFLVLIP 53
GCSL C D + G N C +L SG A PAA L L+P
Sbjct: 65 GCSLNC---VDDSQDYYVGKKNITCCDTDLC-NASGAHALQPAAAILALLP 111
>gi|21361499 SUMO1/sentrin/SMT3 specific protease 3 [Homo sapiens]
Length = 574
Score = 28.9 bits (63), Expect = 6.6
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 219 LEEEGLVLQPKTPLQEDSELLSGFFP 244
+EE+GL PK+PL DS LLS P
Sbjct: 221 MEEDGLRWTPKSPLDPDSGLLSCTLP 246
>gi|239752100 PREDICTED: hypothetical protein [Homo sapiens]
Length = 312
Score = 28.5 bits (62), Expect = 8.6
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 158 DAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGC 217
D ES T P P SSQ + SRDK+P S+ Q+ F+C Y
Sbjct: 37 DTESWLQTERMARSTCSPAPQSSQGDS-ESRDKRPGSAAKPLPPLQIQKRSTSFYCPYNS 95
Query: 218 LL 219
L
Sbjct: 96 RL 97
>gi|239746604 PREDICTED: similar to Keratin-associated protein 10-8
[Homo sapiens]
Length = 312
Score = 28.5 bits (62), Expect = 8.6
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 158 DAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGC 217
D ES T P P SSQ + SRDK+P S+ Q+ F+C Y
Sbjct: 37 DTESWLQTERMARSTCSPAPQSSQGDS-ESRDKRPGSAAKPLPPLQIQKRSTSFYCPYNS 95
Query: 218 LL 219
L
Sbjct: 96 RL 97
>gi|42733592 hypothetical protein LOC399693 [Homo sapiens]
Length = 953
Score = 28.5 bits (62), Expect = 8.6
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 281 CRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTD 317
C D+ + L W GPSQ PW+ +VGS D
Sbjct: 50 CAPAAEDDVAALR--WPGPSQQPDPPWAAPHVVGSDD 84
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,221,920
Number of Sequences: 37866
Number of extensions: 852983
Number of successful extensions: 2257
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2239
Number of HSP's gapped (non-prelim): 31
length of query: 328
length of database: 18,247,518
effective HSP length: 103
effective length of query: 225
effective length of database: 14,347,320
effective search space: 3228147000
effective search space used: 3228147000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.