Guide to the Human Genome
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Name: ZNF169 Sequence: fasta or formatted (603aa) NCBI GI: 110815807
Description:

zinc finger protein 169

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         19           1
 C cysteine            5.0         30           1
 D aspartate           2.3         14           1
 E glutamate           7.6         46           3
 F phenylalanine       4.8         29           2
 G glycine             9.3         56           2
 H histidine           6.3         38           2
 I isoleucine          2.5         15           1
 K lysine              5.8         35           2
 L leucine             9.5         57           3
 M methionine          0.8          5           1
 N asparagine          0.8          5           1
 P proline             5.3         32           1
 Q glutamine           6.6         40           2
 R arginine            9.3         56           2
 S serine              9.5         57           3
 T threonine           5.3         32           2
 V valine              3.5         21           1
 W tryptophan          0.5          3           1
 Y tyrosine            2.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 169 
ZNF133                0.482   zinc finger protein 133 
ZNF133                0.482   zinc finger protein 133 
HKR1                  0.473   GLI-Kruppel family member HKR1 
PRDM9                 0.417   PR domain containing 9 
ZNF337                0.410   zinc finger protein 337 
ZNF343                0.395   zinc finger protein 343 
ZNF432                0.389   zinc finger protein 432 
ZNF615                0.383   zinc finger protein 615 
ZNF135                0.368   zinc finger protein 135 
ZNF182                0.364   zinc finger protein 21 isoform 1 
LOC100287429          0.363   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.363   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.363   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.363   zinc finger protein 84 
ZNF84                 0.363   zinc finger protein 84 
ZNF182                0.363   zinc finger protein 21 isoform 2 
ZNF568                0.361   zinc finger protein 568 
ZNF585B               0.356   zinc finger protein 585B 
ZNF567                0.351   zinc finger protein 567 
ZNF805                0.350   zinc finger protein 805 isoform 1 
ZNF268                0.347   zinc finger protein 268 
ZNF569                0.347   zinc finger protein 569 
ZNF33A                0.343   zinc finger protein 33A isoform a 
ZNF33A                0.342   zinc finger protein 33A isoform b 
ZNF250                0.342   zinc finger protein 250 isoform b 
ZNF264                0.342   zinc finger protein 264 
ZNF605                0.341   zinc finger protein 605 
ZNF33B                0.341   zinc finger protein 33B 
ZNF543                0.338   zinc finger protein 543 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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