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Search of human proteins with 169167822
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169167822 PREDICTED: similar to hCG17429 [Homo sapiens]
(353 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169167822 PREDICTED: similar to hCG17429 [Homo sapiens] 738 0.0
gi|169167904 PREDICTED: similar to hCG17429 [Homo sapiens] 734 0.0
gi|239742531 PREDICTED: similar to hCG17429 [Homo sapiens] 734 0.0
gi|74275348 adenosylmethionine decarboxylase 1 isoform 2 [Homo s... 189 3e-48
gi|74275346 adenosylmethionine decarboxylase 1 isoform 1 precurs... 189 3e-48
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 2e-04
gi|55741677 SET domain containing 1A [Homo sapiens] 42 0.001
gi|55750053 atrophin-1 [Homo sapiens] 42 0.001
gi|55750041 atrophin-1 [Homo sapiens] 42 0.001
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 41 0.001
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 41 0.001
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 41 0.001
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.002
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 0.004
gi|45120119 microtubule associated serine/threonine kinase 1 [Ho... 39 0.007
gi|22027646 angiomotin like 1 [Homo sapiens] 39 0.007
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 39 0.009
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 38 0.012
gi|56711322 ring finger protein 43 [Homo sapiens] 38 0.012
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 37 0.020
gi|146134388 YLP motif containing 1 [Homo sapiens] 37 0.020
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 37 0.020
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 37 0.035
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 37 0.035
gi|116089331 human immunodeficiency virus type I enhancer bindin... 37 0.035
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 37 0.035
gi|32483397 dopamine receptor D4 [Homo sapiens] 36 0.046
gi|163965366 nascent polypeptide-associated complex alpha subuni... 36 0.060
gi|50345997 E1A binding protein p300 [Homo sapiens] 35 0.078
gi|58530845 zyxin [Homo sapiens] 35 0.078
>gi|169167822 PREDICTED: similar to hCG17429 [Homo sapiens]
Length = 353
Score = 738 bits (1905), Expect = 0.0
Identities = 353/353 (100%), Positives = 353/353 (100%)
Query: 1 MTPYDSRCPPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSP 60
MTPYDSRCPPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSP
Sbjct: 1 MTPYDSRCPPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSP 60
Query: 61 PKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASY 120
PKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASY
Sbjct: 61 PKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASY 120
Query: 121 PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPV 180
PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPV
Sbjct: 121 PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPV 180
Query: 181 TKRDVLSGVPSEQRNSLMVMEAVHFSEGTEKQLEVWFSWQQPNANQGSGDLRTIPRSEKV 240
TKRDVLSGVPSEQRNSLMVMEAVHFSEGTEKQLEVWFSWQQPNANQGSGDLRTIPRSEKV
Sbjct: 181 TKRDVLSGVPSEQRNSLMVMEAVHFSEGTEKQLEVWFSWQQPNANQGSGDLRTIPRSEKV 240
Query: 241 ISQPDQTLENLMSGLDPAVMDQFYMKDGVTAKDVICESGIHNLIPGSVINATMFNPYGYS 300
ISQPDQTLENLMSGLDPAVMDQFYMKDGVTAKDVICESGIHNLIPGSVINATMFNPYGYS
Sbjct: 241 ISQPDQTLENLMSGLDPAVMDQFYMKDGVTAKDVICESGIHNLIPGSVINATMFNPYGYS 300
Query: 301 MNGMKSDGTYWTIHITPEPESFYKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ 353
MNGMKSDGTYWTIHITPEPESFYKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ
Sbjct: 301 MNGMKSDGTYWTIHITPEPESFYKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ 353
>gi|169167904 PREDICTED: similar to hCG17429 [Homo sapiens]
Length = 353
Score = 734 bits (1896), Expect = 0.0
Identities = 351/353 (99%), Positives = 352/353 (99%)
Query: 1 MTPYDSRCPPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSP 60
MTPYDSRCPPKLQISAPAQL PHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSP
Sbjct: 1 MTPYDSRCPPKLQISAPAQLPPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSP 60
Query: 61 PKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASY 120
PKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASY
Sbjct: 61 PKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASY 120
Query: 121 PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPV 180
PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPV
Sbjct: 121 PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPV 180
Query: 181 TKRDVLSGVPSEQRNSLMVMEAVHFSEGTEKQLEVWFSWQQPNANQGSGDLRTIPRSEKV 240
TKRDVLSGVPSEQRNSLMVMEAVHFSEGTEK+LEVWFSWQQPNANQGSGDLRTIPRSEKV
Sbjct: 181 TKRDVLSGVPSEQRNSLMVMEAVHFSEGTEKRLEVWFSWQQPNANQGSGDLRTIPRSEKV 240
Query: 241 ISQPDQTLENLMSGLDPAVMDQFYMKDGVTAKDVICESGIHNLIPGSVINATMFNPYGYS 300
ISQPDQTLENLMSGLDPAVMDQFYMKDGVTAKDVICESGIHNLIPGSVINATMFNPYGYS
Sbjct: 241 ISQPDQTLENLMSGLDPAVMDQFYMKDGVTAKDVICESGIHNLIPGSVINATMFNPYGYS 300
Query: 301 MNGMKSDGTYWTIHITPEPESFYKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ 353
MNGMKSDGTYWTIHITPEPESFYKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ
Sbjct: 301 MNGMKSDGTYWTIHITPEPESFYKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ 353
>gi|239742531 PREDICTED: similar to hCG17429 [Homo sapiens]
Length = 353
Score = 734 bits (1896), Expect = 0.0
Identities = 351/353 (99%), Positives = 352/353 (99%)
Query: 1 MTPYDSRCPPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSP 60
MTPYDSRCPPKLQISAPAQL PHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSP
Sbjct: 1 MTPYDSRCPPKLQISAPAQLPPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSP 60
Query: 61 PKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASY 120
PKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASY
Sbjct: 61 PKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASY 120
Query: 121 PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPV 180
PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPV
Sbjct: 121 PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPV 180
Query: 181 TKRDVLSGVPSEQRNSLMVMEAVHFSEGTEKQLEVWFSWQQPNANQGSGDLRTIPRSEKV 240
TKRDVLSGVPSEQRNSLMVMEAVHFSEGTEK+LEVWFSWQQPNANQGSGDLRTIPRSEKV
Sbjct: 181 TKRDVLSGVPSEQRNSLMVMEAVHFSEGTEKRLEVWFSWQQPNANQGSGDLRTIPRSEKV 240
Query: 241 ISQPDQTLENLMSGLDPAVMDQFYMKDGVTAKDVICESGIHNLIPGSVINATMFNPYGYS 300
ISQPDQTLENLMSGLDPAVMDQFYMKDGVTAKDVICESGIHNLIPGSVINATMFNPYGYS
Sbjct: 241 ISQPDQTLENLMSGLDPAVMDQFYMKDGVTAKDVICESGIHNLIPGSVINATMFNPYGYS 300
Query: 301 MNGMKSDGTYWTIHITPEPESFYKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ 353
MNGMKSDGTYWTIHITPEPESFYKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ
Sbjct: 301 MNGMKSDGTYWTIHITPEPESFYKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ 353
>gi|74275348 adenosylmethionine decarboxylase 1 isoform 2 [Homo
sapiens]
Length = 186
Score = 189 bits (480), Expect = 3e-48
Identities = 104/163 (63%), Positives = 107/163 (65%), Gaps = 48/163 (29%)
Query: 239 KVISQPDQTLENLMSGLDPAVMDQFYMKDGVTAKDVICESGIHNLIPGSVINATMFNPYG 298
+VISQPDQTLE LMS LDPAVMDQFYMKDGVTAKDV ESGI +LIPGSVI+ATMFNP G
Sbjct: 20 RVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCG 79
Query: 299 YSMNGMKSDGTYWTIHITPEPESFY----------------------------------- 323
YSMNGMKSDGTYWTIHITPEPE Y
Sbjct: 80 YSMNGMKSDGTYWTIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGKFVTTLFVN 139
Query: 324 -------------KIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ 353
KIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ
Sbjct: 140 QSSKCRTVLASPQKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ 182
>gi|74275346 adenosylmethionine decarboxylase 1 isoform 1 precursor
[Homo sapiens]
Length = 334
Score = 189 bits (480), Expect = 3e-48
Identities = 104/163 (63%), Positives = 107/163 (65%), Gaps = 48/163 (29%)
Query: 239 KVISQPDQTLENLMSGLDPAVMDQFYMKDGVTAKDVICESGIHNLIPGSVINATMFNPYG 298
+VISQPDQTLE LMS LDPAVMDQFYMKDGVTAKDV ESGI +LIPGSVI+ATMFNP G
Sbjct: 168 RVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCG 227
Query: 299 YSMNGMKSDGTYWTIHITPEPESFY----------------------------------- 323
YSMNGMKSDGTYWTIHITPEPE Y
Sbjct: 228 YSMNGMKSDGTYWTIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGKFVTTLFVN 287
Query: 324 -------------KIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ 353
KIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ
Sbjct: 288 QSSKCRTVLASPQKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQ 330
Score = 72.0 bits (175), Expect = 8e-13
Identities = 34/39 (87%), Positives = 35/39 (89%)
Query: 200 MEAVHFSEGTEKQLEVWFSWQQPNANQGSGDLRTIPRSE 238
MEA HF EGTEK LEVWFS QQP+ANQGSGDLRTIPRSE
Sbjct: 1 MEAAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSE 39
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 44.3 bits (103), Expect = 2e-04
Identities = 53/184 (28%), Positives = 65/184 (35%), Gaps = 19/184 (10%)
Query: 3 PYDSRCPPKLQISAPAQLSPHSLPSSGTQFPNPPAH---SLRHRPSRRRERDTKRHGASS 59
P S P L+ + L+P SL + PP SL P + +
Sbjct: 503 PLSSLIMPPLETQS--SLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLET 560
Query: 60 PPKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKAS 119
PP PA C P T P S+ PP P A P Q S PLS A+
Sbjct: 561 PPCPAPCPLQAPPSPLTTPPPETPSSIAT--PPPQAPPALASPPLQGLPS--PPLSPLAT 616
Query: 120 YPQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASP--CQSNLVPNA-AAEVFRDTFASPL 176
P QA P L+ P PP P SP S PNA A + + F+ P
Sbjct: 617 PPP-------QAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP 669
Query: 177 EEPV 180
PV
Sbjct: 670 SPPV 673
Score = 39.3 bits (90), Expect = 0.005
Identities = 45/166 (27%), Positives = 57/166 (34%), Gaps = 18/166 (10%)
Query: 2 TPYDSRCPPKLQISAPAQLSP--HSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASS 59
TP + PP ++ P L+P S P S P+PPA P + +
Sbjct: 325 TPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQ 384
Query: 60 PPKPAACGHP-NAPCARDTADPAPLCSLTAFFPPG-----PLHPIAARSPNQKATSRNAP 113
P H +P + P L SL A G H SP Q S +P
Sbjct: 385 TIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSP 444
Query: 114 LSSKASYPQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNL 159
++ P P PL L L PA PP S SP S L
Sbjct: 445 SRPASTPPDSP--------PLQAPLSL--PASPPLQTSLSPAVSPL 480
Score = 39.3 bits (90), Expect = 0.005
Identities = 50/171 (29%), Positives = 63/171 (36%), Gaps = 33/171 (19%)
Query: 9 PPKL--QISAPAQLSPHSLPSSGTQ-FPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAA 65
PP+ I+ P +P +L S Q P+PP L P + + PP A
Sbjct: 580 PPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPX------LALPPLQAP 633
Query: 66 CGHPNAPCARDTADPAPLCS-------LTAFFPPGPLHPIAARSPNQKATSRNAPLSSKA 118
P +P A P+P L A F P P P+ AP S A
Sbjct: 634 PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV------------QAPFSPPA 681
Query: 119 SYPQGPFHSR-GQAKPLCLCLGLR----PPAQPPRFPSASPCQSNLVPNAA 164
S P P + QA P L+ PPA PP PSA+P P AA
Sbjct: 682 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 732
Score = 34.7 bits (78), Expect = 0.13
Identities = 48/197 (24%), Positives = 67/197 (34%), Gaps = 24/197 (12%)
Query: 16 APAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAAC------GHP 69
AP L+ H L + + P+PP + P+ + + +PP AA P
Sbjct: 652 APNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 711
Query: 70 NAPCARDTADPAPLCSLTAFFPP----------GPLHPIAARSPN----QKATSRNAPLS 115
+P +A P P PP P+ P A P A P S
Sbjct: 712 ASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPS 771
Query: 116 SKASYPQGPFHSRGQAKPLCLCLGLRPPAQP-PRFPSASPCQSNLVPNAAAEVFRDTFAS 174
AS P P P L PP Q P P++ P Q+ P+A+ +
Sbjct: 772 PPASLPMSPLAKPPPQAPPALA---TPPLQALPSPPASFPGQAPFSPSASLPMSPLATPP 828
Query: 175 PLEEPVTKRDVLSGVPS 191
P PV +L PS
Sbjct: 829 PQAPPVLAAPLLQVPPS 845
Score = 32.0 bits (71), Expect = 0.86
Identities = 39/150 (26%), Positives = 54/150 (36%), Gaps = 14/150 (9%)
Query: 22 PHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAACGHPNAPCARDTADPA 81
P PS+ P PP R S E T ++ +P+A G P +R + A
Sbjct: 190 PRPAPSAR---PRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 246
Query: 82 -PLCS------LTAFFPPGPLHPIAARSPNQKA--TSRNAPLSSKASYPQGPFHSRGQAK 132
PL S P P HP + +A + P A+ GP S A
Sbjct: 247 TPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLAT 306
Query: 133 PLCLCLGLRPPAQPPRFPSASPCQSNLVPN 162
P RP PP +A+P + L P+
Sbjct: 307 PSPSGTKARP--VPPPDNAATPLPATLPPS 334
Score = 31.6 bits (70), Expect = 1.1
Identities = 43/146 (29%), Positives = 50/146 (34%), Gaps = 31/146 (21%)
Query: 10 PKLQISAPAQLSPHSLPSSGTQFPNPP---AHSLRHRPSRRRERDTKRHGASSPPKPAAC 66
P LQ+ SP PS+ PP A L+ PS AS P P A
Sbjct: 733 PPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPP---------ASLPMSPLAK 783
Query: 67 GHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASYPQGPFH 126
P AP A T L S A FP AP S AS P P
Sbjct: 784 PPPQAPPALATPPLQALPSPPASFP------------------GQAPFSPSASLPMSPLA 825
Query: 127 S-RGQAKPLCLCLGLRPPAQPPRFPS 151
+ QA P+ L+ P PP P+
Sbjct: 826 TPPPQAPPVLAAPLLQVPPSPPASPT 851
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 41.6 bits (96), Expect = 0.001
Identities = 54/192 (28%), Positives = 76/192 (39%), Gaps = 14/192 (7%)
Query: 15 SAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAACGHPNAPCA 74
S+ + S S SS +QF + A+ + S R + RH + P + P AP A
Sbjct: 342 SSLSSSSSSSSSSSSSQFRSSDANYPAYYESWNRYQ---RHTSYPPRRATREEPPGAPFA 398
Query: 75 RDTADPAPLCSLTAFFPPGPLHPIAA--RSPNQKATSRNAPLSSKASYPQGPFHSRGQAK 132
+TA+ P S T++ PP P P R P +A P GP R + +
Sbjct: 399 ENTAERFP-PSYTSYLPPEPSRPTDQDYRPPASEAPPPEPPEPGGGGGGGGPSPEREEVR 457
Query: 133 PLCLCLGLRPPAQPPRFPSASPCQSN-LVPNAAAEVFRDTFASPLEEPVTKRDVL-SGVP 190
PA P R S +P +N VP A L+E +K L S
Sbjct: 458 T------SPRPASPARSGSPAPETTNESVPFAQHSSLDSRIEMLLKEQRSKFSFLASDTE 511
Query: 191 SEQRNSLMVMEA 202
E+ NS MV+ A
Sbjct: 512 EEEENSSMVLGA 523
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 41.6 bits (96), Expect = 0.001
Identities = 49/204 (24%), Positives = 76/204 (37%), Gaps = 45/204 (22%)
Query: 9 PPKLQISAPAQLSPHSLP-SSGTQFPNPPAHSLRH-----------RPSRRRERDTKRHG 56
PP ++ A + P P S+G Q P S H + +++++ + HG
Sbjct: 446 PPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHG 505
Query: 57 ASSPPKPAACGHPNAPCARDTADP---APLCSLTAFFPPGPLH----------------- 96
S PP P A HP + A P +P +PPGP H
Sbjct: 506 NSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNG 565
Query: 97 -PIAARSPNQKATSRNAPLSSKASYPQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPC 155
P+++ S + +TS+ + S S QGP +G P PP P ++S
Sbjct: 566 PPVSSSSNSSSSTSQGSYPCSHPSPSQGP---QGAPYPF-------PPV--PTVTTSSAT 613
Query: 156 QSNLVPNAAAEVFRDTFASPLEEP 179
S ++ A+ ASP P
Sbjct: 614 LSTVIATVASSPAGYKTASPPGPP 637
Score = 35.0 bits (79), Expect = 0.10
Identities = 37/153 (24%), Positives = 51/153 (33%), Gaps = 21/153 (13%)
Query: 9 PPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAACGH 68
PP + SPHSLP + + P PP R SS +A
Sbjct: 343 PPGPEKGPTLAPSPHSLPPASSSAPAPP----------------MRFPYSSSSSSSAAAS 386
Query: 69 PNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASYPQGPFHSR 128
++ + +A P P +P P + NQ L S+A + QGP
Sbjct: 387 SSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGP---- 442
Query: 129 GQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVP 161
P L A P FP ++ QS P
Sbjct: 443 -PPPPPYGRLLANSNAHPGPFPPSTGAQSTAHP 474
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 41.6 bits (96), Expect = 0.001
Identities = 49/204 (24%), Positives = 76/204 (37%), Gaps = 45/204 (22%)
Query: 9 PPKLQISAPAQLSPHSLP-SSGTQFPNPPAHSLRH-----------RPSRRRERDTKRHG 56
PP ++ A + P P S+G Q P S H + +++++ + HG
Sbjct: 446 PPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHG 505
Query: 57 ASSPPKPAACGHPNAPCARDTADP---APLCSLTAFFPPGPLH----------------- 96
S PP P A HP + A P +P +PPGP H
Sbjct: 506 NSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNG 565
Query: 97 -PIAARSPNQKATSRNAPLSSKASYPQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPC 155
P+++ S + +TS+ + S S QGP +G P PP P ++S
Sbjct: 566 PPVSSSSNSSSSTSQGSYPCSHPSPSQGP---QGAPYPF-------PPV--PTVTTSSAT 613
Query: 156 QSNLVPNAAAEVFRDTFASPLEEP 179
S ++ A+ ASP P
Sbjct: 614 LSTVIATVASSPAGYKTASPPGPP 637
Score = 35.0 bits (79), Expect = 0.10
Identities = 37/153 (24%), Positives = 51/153 (33%), Gaps = 21/153 (13%)
Query: 9 PPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAACGH 68
PP + SPHSLP + + P PP R SS +A
Sbjct: 343 PPGPEKGPTLAPSPHSLPPASSSAPAPP----------------MRFPYSSSSSSSAAAS 386
Query: 69 PNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASYPQGPFHSR 128
++ + +A P P +P P + NQ L S+A + QGP
Sbjct: 387 SSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGP---- 442
Query: 129 GQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVP 161
P L A P FP ++ QS P
Sbjct: 443 -PPPPPYGRLLANSNAHPGPFPPSTGAQSTAHP 474
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 41.2 bits (95), Expect = 0.001
Identities = 50/165 (30%), Positives = 65/165 (39%), Gaps = 19/165 (11%)
Query: 9 PPKLQISAPAQLSPHSLPSSGTQFPNP-PAHSLRHRPSRRRERDTKRHGASSPPKPAACG 67
PP LQ +P S P Q P P P S P + + +P +P A
Sbjct: 184 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPT-----ASQAPNQPQA-- 236
Query: 68 HPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQ--KATSRNAPLSSKASYPQGPF 125
P AP AP +L PP P HP SP+ + + +A S S+ Q P
Sbjct: 237 -PTAPVPHTHIQQAP--ALHPQRPPSP-HPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPL 292
Query: 126 HSRGQAKPLCLCLG--LRPPAQPPRF---PSASPCQSNLVPNAAA 165
H +G P L G L+ P P F P AS Q+ L + AA
Sbjct: 293 HGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAA 337
Score = 40.4 bits (93), Expect = 0.002
Identities = 45/159 (28%), Positives = 54/159 (33%), Gaps = 22/159 (13%)
Query: 6 SRCPPKLQISAPAQLS-PHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPA 64
S+ PP+ Q PA L+ PH P T P PA P A+ PP PA
Sbjct: 355 SQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPA 414
Query: 65 -------ACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSK 117
+ HP +A P PL P P + P S+N P
Sbjct: 415 LKPLSSLSTHHP------PSAHPPPL----QLMPQSQPLPSSPAQPPGLTQSQNLP-PPP 463
Query: 118 ASYPQGPFHSRGQAKPLC---LCLGLRPPAQPPRFPSAS 153
AS+P H P G PP PP PS S
Sbjct: 464 ASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTS 502
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 41.2 bits (95), Expect = 0.001
Identities = 50/165 (30%), Positives = 65/165 (39%), Gaps = 19/165 (11%)
Query: 9 PPKLQISAPAQLSPHSLPSSGTQFPNP-PAHSLRHRPSRRRERDTKRHGASSPPKPAACG 67
PP LQ +P S P Q P P P S P + + +P +P A
Sbjct: 738 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPT-----ASQAPNQPQA-- 790
Query: 68 HPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQ--KATSRNAPLSSKASYPQGPF 125
P AP AP +L PP P HP SP+ + + +A S S+ Q P
Sbjct: 791 -PTAPVPHTHIQQAP--ALHPQRPPSP-HPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPL 846
Query: 126 HSRGQAKPLCLCLG--LRPPAQPPRF---PSASPCQSNLVPNAAA 165
H +G P L G L+ P P F P AS Q+ L + AA
Sbjct: 847 HGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAA 891
Score = 40.4 bits (93), Expect = 0.002
Identities = 45/159 (28%), Positives = 54/159 (33%), Gaps = 22/159 (13%)
Query: 6 SRCPPKLQISAPAQLS-PHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPA 64
S+ PP+ Q PA L+ PH P T P PA P A+ PP PA
Sbjct: 909 SQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPA 968
Query: 65 -------ACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSK 117
+ HP +A P PL P P + P S+N P
Sbjct: 969 LKPLSSLSTHHP------PSAHPPPL----QLMPQSQPLPSSPAQPPGLTQSQNLP-PPP 1017
Query: 118 ASYPQGPFHSRGQAKPLC---LCLGLRPPAQPPRFPSAS 153
AS+P H P G PP PP PS S
Sbjct: 1018 ASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTS 1056
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 41.2 bits (95), Expect = 0.001
Identities = 50/165 (30%), Positives = 65/165 (39%), Gaps = 19/165 (11%)
Query: 9 PPKLQISAPAQLSPHSLPSSGTQFPNP-PAHSLRHRPSRRRERDTKRHGASSPPKPAACG 67
PP LQ +P S P Q P P P S P + + +P +P A
Sbjct: 738 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPT-----ASQAPNQPQA-- 790
Query: 68 HPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQ--KATSRNAPLSSKASYPQGPF 125
P AP AP +L PP P HP SP+ + + +A S S+ Q P
Sbjct: 791 -PTAPVPHTHIQQAP--ALHPQRPPSP-HPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPL 846
Query: 126 HSRGQAKPLCLCLG--LRPPAQPPRF---PSASPCQSNLVPNAAA 165
H +G P L G L+ P P F P AS Q+ L + AA
Sbjct: 847 HGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAA 891
Score = 40.4 bits (93), Expect = 0.002
Identities = 45/159 (28%), Positives = 54/159 (33%), Gaps = 22/159 (13%)
Query: 6 SRCPPKLQISAPAQLS-PHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPA 64
S+ PP+ Q PA L+ PH P T P PA P A+ PP PA
Sbjct: 909 SQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPA 968
Query: 65 -------ACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSK 117
+ HP +A P PL P P + P S+N P
Sbjct: 969 LKPLSSLSTHHP------PSAHPPPL----QLMPQSQPLPSSPAQPPGLTQSQNLP-PPP 1017
Query: 118 ASYPQGPFHSRGQAKPLC---LCLGLRPPAQPPRFPSAS 153
AS+P H P G PP PP PS S
Sbjct: 1018 ASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTS 1056
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 40.4 bits (93), Expect = 0.002
Identities = 55/213 (25%), Positives = 71/213 (33%), Gaps = 41/213 (19%)
Query: 1 MTPYDSRCPPKLQI----------SAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRER 50
+ P PP LQ A L +L ++ + P+PP L P +
Sbjct: 340 LAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPP- 398
Query: 51 DTKRHGASSPPKPAACGHPNAPCARDTADPAPLCS-------LTAFFPPGPLHPIAARSP 103
+ PP A P +P A P+P L A F P P P+
Sbjct: 399 -----ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV----- 448
Query: 104 NQKATSRNAPLSSKASYPQGPFHSR-GQAKPLCLCLGLR----PPAQPPRFPSASPCQSN 158
AP S AS P P + QA P L+ PPA PP PSA+P
Sbjct: 449 -------QAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP-PPQ 500
Query: 159 LVPNAAAEVFRDTFASPLEEPVTKRDVLSGVPS 191
P AA + P P L +PS
Sbjct: 501 APPPLAAPPLQLAKPPPQAPPALATPPLQALPS 533
Score = 39.7 bits (91), Expect = 0.004
Identities = 56/193 (29%), Positives = 71/193 (36%), Gaps = 37/193 (19%)
Query: 2 TPYDSRCPPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRE-------RDTKR 54
TP+ S +L P S P S P+PPA PS+ + T
Sbjct: 324 TPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATP----PSQATTSLGSPTLQATHS 379
Query: 55 HGASSPPKPAACGHPNAPCARD----TADPAPLCSLTAFFPPGPLHPIAARSPNQKATS- 109
S P P A P AP A A P+P S P PL + ++PN A
Sbjct: 380 FLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASP----PLSPLATPSPQAPNALAVHL 435
Query: 110 RNAPLSSKASYP-QGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVF 168
AP S S P Q PF PPA PP PSA+P S P+ AA
Sbjct: 436 LQAPFSPPPSPPVQAPF---------------SPPASPPVSPSATP-PSQAPPSLAAPPL 479
Query: 169 RDTFASPLEEPVT 181
+ + P P++
Sbjct: 480 QVPPSPPASPPMS 492
Score = 32.3 bits (72), Expect = 0.66
Identities = 46/189 (24%), Positives = 64/189 (33%), Gaps = 20/189 (10%)
Query: 22 PHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAACGHPNAPCARDTADPA 81
P PS+ P PP R S E T ++ +P+A G P +R + A
Sbjct: 190 PRPAPSAR---PRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 246
Query: 82 -PLCS------LTAFFPPGPLHPIAARSPNQKA--TSRNAPLSSKASYPQGPFHSRGQAK 132
PL S P P HP + +A + P A+ GP S A
Sbjct: 247 TPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLAT 306
Query: 133 PL-CLCLGLRPPAQPPRFPSASPCQSNLV-------PNAAAEVFRDTFASPLEEPVTKRD 184
P L + P P P +S L P+ +A T SP P ++
Sbjct: 307 PSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAT 366
Query: 185 VLSGVPSEQ 193
G P+ Q
Sbjct: 367 TSLGSPTLQ 375
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 39.7 bits (91), Expect = 0.004
Identities = 55/211 (26%), Positives = 70/211 (33%), Gaps = 41/211 (19%)
Query: 3 PYDSRCPPKLQI----------SAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDT 52
P PP LQ A L +L ++ + P+PP L P +
Sbjct: 303 PPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPP--- 359
Query: 53 KRHGASSPPKPAACGHPNAPCARDTADPAPLCS-------LTAFFPPGPLHPIAARSPNQ 105
+ PP A P +P A P+P L A F P P P+
Sbjct: 360 ---ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV------- 409
Query: 106 KATSRNAPLSSKASYPQGPFHSR-GQAKPLCLCLGLR----PPAQPPRFPSASPCQSNLV 160
AP S AS P P + QA P L+ PPA PP PSA+P
Sbjct: 410 -----QAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP-PPQAP 463
Query: 161 PNAAAEVFRDTFASPLEEPVTKRDVLSGVPS 191
P AA + P P L +PS
Sbjct: 464 PPLAAPPLQLAKPPPQAPPALATPPLQALPS 494
Score = 34.3 bits (77), Expect = 0.17
Identities = 47/184 (25%), Positives = 65/184 (35%), Gaps = 40/184 (21%)
Query: 22 PHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAACGHPNAPCARDTADPA 81
P PS+ P PP R S E T ++ +P+A G P +R + A
Sbjct: 181 PRPAPSAR---PRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 237
Query: 82 PLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASYPQGPFHSRGQAKPLCLCLGLR 141
PL A P+ + T P+ P H Q KP L LR
Sbjct: 238 T-----------PLSSPARSGPSARGT------------PRAPAHP-SQPKPKGL-QALR 272
Query: 142 PP-AQPPR---FPSASPCQSNLV--------PNAAAEVFRDTFASPLEEPVTKRDVLSGV 189
PP PPR P+ P S+ + P+ +A T SP P ++ G
Sbjct: 273 PPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGS 332
Query: 190 PSEQ 193
P+ Q
Sbjct: 333 PTLQ 336
>gi|45120119 microtubule associated serine/threonine kinase 1 [Homo
sapiens]
Length = 1570
Score = 38.9 bits (89), Expect = 0.007
Identities = 49/189 (25%), Positives = 75/189 (39%), Gaps = 30/189 (15%)
Query: 27 SSGTQFPNPPAHSLRHRP---SRRRERDTKRHGASSPPKPAACGHPNAPCARDTADPAPL 83
SS P P H L R S R D+ GASS A PN+P +
Sbjct: 1119 SSSDSLPGSPTHGLPARSPTHSYRSTPDSAYLGASSQSSSPASSTPNSPAS--------- 1169
Query: 84 CSLTAFFPPGPLHPIAARSPNQKATSR-----NAPLS--------SKASYPQGPFHSRGQ 130
S + P LH ++ + Q ++R N PLS ++AS P P H+ G
Sbjct: 1170 -SASHHIRPSTLHGLSPKLHRQYRSARCKSAGNIPLSPLAHTPSPTQASPPPLPGHTVGS 1228
Query: 131 A---KPLCLCLGLRPPAQPPRFPSASPCQSNLVPNA-AAEVFRDTFASPLEEPVTKRDVL 186
+ + L PP PR SA P +S L+ +AE + ++ + + K +
Sbjct: 1229 SHTTQSFPAKLHSSPPVVRPRPKSAEPPRSPLLKRVQSAEKLGASLSADKKGALRKHSLE 1288
Query: 187 SGVPSEQRN 195
G P +++
Sbjct: 1289 VGHPDFRKD 1297
>gi|22027646 angiomotin like 1 [Homo sapiens]
Length = 956
Score = 38.9 bits (89), Expect = 0.007
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 90 FPPGPLHPIAARS---PNQKATSRNAPLSSKASYPQGPFHSRGQAKPLCLCLGLRPPAQP 146
+ P P + + +R P +++P+SS+ S GP HS PL + LG QP
Sbjct: 364 YQPPPEYGVTSRPCQLPFPSTMQQHSPMSSQTSSASGPLHSVSLPLPLPMALG---APQP 420
Query: 147 PRFPSASPCQSNLVPNAAAEVFR 169
P P+ASP Q L P+A A V R
Sbjct: 421 P--PAASPSQ-QLGPDAFAIVER 440
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 38.5 bits (88), Expect = 0.009
Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 5/170 (2%)
Query: 9 PPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAACGH 68
P +L P+ L L S +P L+ P R +K S K +
Sbjct: 549 PAELAAPLPSPLPEQPLDSPAAPALSPSGLGLQPGPERTSTTKSKELSPGSAQKGSPGSS 608
Query: 69 PNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPN--QKATSRNAPLSSKASYPQ-GPF 125
CA P A P P P A +SP+ +K + + AP+ K + Q G
Sbjct: 609 QGTACAGTQPGAQPGAQPGA--SPSPSQPPADQSPHTLRKVSKKLAPIPPKVPFGQPGAM 666
Query: 126 HSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASP 175
+ +P + L PP+ P + + P +L + ASP
Sbjct: 667 ADQSAGQPSPVSLSPTPPSTPSPYGLSYPQGYSLASGQLSPAAAPPLASP 716
Score = 36.2 bits (82), Expect = 0.046
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 28/154 (18%)
Query: 58 SSPPKPAACGHPNAPCARDTADPAPLCS-LTAFFPPGPLHPIAARS-----------PNQ 105
SS + +C P+ + A PA L + L + P PL AA + P +
Sbjct: 530 SSAGRKVSCAPPSM---QPPAPPAELAAPLPSPLPEQPLDSPAAPALSPSGLGLQPGPER 586
Query: 106 KATSRNAPLSSKASYPQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAA 165
+T+++ LS ++ P S+G A C G +P AQP P ASP S + +
Sbjct: 587 TSTTKSKELSPGSAQKGSPGSSQGTA-----CAGTQPGAQPGAQPGASPSPSQPPADQSP 641
Query: 166 EVFRDTFAS--------PLEEPVTKRDVLSGVPS 191
R P +P D +G PS
Sbjct: 642 HTLRKVSKKLAPIPPKVPFGQPGAMADQSAGQPS 675
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 38.1 bits (87), Expect = 0.012
Identities = 49/178 (27%), Positives = 62/178 (34%), Gaps = 16/178 (8%)
Query: 11 KLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRP----SRRRERDTKRHGASSPPKPAAC 66
+LQ P+ L S SS +Q P + S + S +SS P P AC
Sbjct: 828 RLQSLIPSALGSASPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSSSSSPPPGAC 887
Query: 67 GHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASYPQGPFH 126
G P+AP P+ + T G H S + + PL A PQ
Sbjct: 888 GSPSAP------TPSAGVAATTIAGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQAAQP 941
Query: 127 S---RGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPVT 181
S G L L PP R PS+SP Q P E+ PL P T
Sbjct: 942 SPAPPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQPP---GELSLGLATGPLSTPET 996
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 38.1 bits (87), Expect = 0.012
Identities = 36/140 (25%), Positives = 50/140 (35%), Gaps = 16/140 (11%)
Query: 7 RCPPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAAC 66
+CP L AP + S+ S + N SL R +R KR G S P P +
Sbjct: 614 QCPRALPEPAPGPVDASSICPSTSSLFNLQKSSLSARHPQR-----KRRGGPSEPTPGS- 667
Query: 67 GHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASYPQGPFH 126
A P C + + P +P SP P K P+ P
Sbjct: 668 -------RPQDATVHPACQIFPHYTPSVAYPW---SPEAHPLICGPPGLDKRLLPETPGP 717
Query: 127 SRGQAKPLCLCLGLRPPAQP 146
++P+ LCL R P +P
Sbjct: 718 CYSNSQPVWLCLTPRQPLEP 737
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 37.4 bits (85), Expect = 0.020
Identities = 35/121 (28%), Positives = 44/121 (36%), Gaps = 11/121 (9%)
Query: 57 ASSPPKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSS 116
ASSP G P + D+ +PL P P S + LS
Sbjct: 951 ASSPASSLGSGTPGT--SSDSRQRSPLSDYMNLDFSSPKSPKPGAPSGHPVGSLDGLLSP 1008
Query: 117 KASYPQGPFHSRGQAKPLCLCLGLRPPAQPP------RFPSASPCQSNLVPNAAAEVFRD 170
+AS P P R A P L+PP PP R P AS + P AA+ + D
Sbjct: 1009 EASSPYPPLPPRPSASP---SSSLQPPPPPPAPGELYRLPPASAVATAQGPGAASSLSSD 1065
Query: 171 T 171
T
Sbjct: 1066 T 1066
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 37.4 bits (85), Expect = 0.020
Identities = 52/199 (26%), Positives = 68/199 (34%), Gaps = 32/199 (16%)
Query: 3 PYDSRCPPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPK 62
P + PP L S P + P +LP++ PP P
Sbjct: 529 PLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPP-------------------VMPPSL 569
Query: 63 PAACGHPNAPCARDTADPAPLC---SLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKAS 119
P + P P + +A P P+ SL++ PP L P + S PLSS
Sbjct: 570 PTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATP 629
Query: 120 YPQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEP 179
P P P + G+ P P AS QS+ VP T S P
Sbjct: 630 PPGIP--------PPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAP 681
Query: 180 VT--KRDVLSGVPSEQRNS 196
T + S PSEQ NS
Sbjct: 682 PTTYHPPLQSAGPSEQVNS 700
Score = 28.9 bits (63), Expect = 7.3
Identities = 31/122 (25%), Positives = 41/122 (33%), Gaps = 11/122 (9%)
Query: 3 PYDSRCPPKLQISAPAQLSPHSLPSSGTQFPNPPAH--SLRHRPSRRRERDTKRHGASSP 60
P S PP P Q P P + +Q PPA + PS+ T + +SS
Sbjct: 153 PPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSS 212
Query: 61 PKPAACGHPNAPCARDTADPA----PLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSS 116
+ H + A P+ PP P P P K T + PL S
Sbjct: 213 SSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAP-----PGNKTTVQQEPLES 267
Query: 117 KA 118
A
Sbjct: 268 GA 269
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 37.4 bits (85), Expect = 0.020
Identities = 43/185 (23%), Positives = 65/185 (35%), Gaps = 25/185 (13%)
Query: 9 PPKLQISAPAQLSPHS-----LPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKP 63
PP + +P+ P P + P+PP P R +R+ S PPK
Sbjct: 553 PPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKR 612
Query: 64 AACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAP-LSSKASYPQ 122
P P R + P P ++ PP + + T R +P LSSK
Sbjct: 613 RTASPPPPPKRRASPSPPPKRRVSHSPPP--------KQRSSPVTKRRSPSLSSKHRKGS 664
Query: 123 GPFHSRGQAKPLCLCLGLRP-----PAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLE 177
P S +A+ +P P+ PR P S + A++ R SP
Sbjct: 665 SPSRSTREAR------SPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPST 718
Query: 178 EPVTK 182
P+ +
Sbjct: 719 RPIRR 723
Score = 30.4 bits (67), Expect = 2.5
Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 29/147 (19%)
Query: 36 PAHSLRHRPSRRRERDTKRHGASSPPKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPL 95
P+H+ RP RR ++ + P P P R P + PP P
Sbjct: 293 PSHT---RPRRRHRSRSRSYSPRRRPSPR-----RRPSPRRRTPPRRM-------PPPPR 337
Query: 96 HPIAARSPNQKATSRNAPLSSKASYPQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPC 155
H +RSP ++ +A LS +S SR ++ PP +PP+ S+ P
Sbjct: 338 HR-RSRSPVRRRRRSSASLSGSSSSSSS---SRSRS----------PPKKPPKRTSSPPR 383
Query: 156 QSNLVPNAAAEVFRDTFASPLEEPVTK 182
++ + +A+ R SP P K
Sbjct: 384 KTRRLSPSASPPRRRHRPSPPATPPPK 410
Score = 29.3 bits (64), Expect = 5.6
Identities = 36/143 (25%), Positives = 49/143 (34%), Gaps = 13/143 (9%)
Query: 41 RHRPSRRRERDTKRHGASSPPKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAA 100
RH PSR ++ + P+ P+ P R P+P P P P
Sbjct: 522 RHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTP--PPRR 579
Query: 101 RSPNQKATSRNAPLSSKASYPQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLV 160
R+P+ R +P + S P R P PP P R S SP V
Sbjct: 580 RTPS-PPPRRRSPSPRRYS---PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRV 635
Query: 161 PNAAAEVFRDTFASPLEEPVTKR 183
++ R + PVTKR
Sbjct: 636 SHSPPPKQRSS-------PVTKR 651
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 36.6 bits (83), Expect = 0.035
Identities = 48/196 (24%), Positives = 69/196 (35%), Gaps = 25/196 (12%)
Query: 9 PPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPA-ACG 67
PP+ + ++ LPS T+ PP+ L + P +HG SP P+ G
Sbjct: 1416 PPQTHVRNSSEQLSQKLPSVPTKLHCPPSPHLENPPKSSTPHTPVQHGYLSPKPPSQQLG 1475
Query: 68 HPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSP--NQKATS-----RNAPLSSKASY 120
P P +P P +P A P Q+ATS + S A+Y
Sbjct: 1476 SPYRP----HHSQSPQVGTPQREPQRNFYPAAQNLPANTQQATSGTLFTQTPSGQSSATY 1531
Query: 121 PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPV 180
Q S P PP PP P +S N P+A + + S ++ V
Sbjct: 1532 SQFNQQSLNSTAP--------PPPPPP--PPSSSYYQNQQPSANFQNYNQLKGSLSQQTV 1581
Query: 181 ---TKRDVLSGVPSEQ 193
L G S+Q
Sbjct: 1582 FTSGPNQALPGTTSQQ 1597
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 36.6 bits (83), Expect = 0.035
Identities = 48/196 (24%), Positives = 69/196 (35%), Gaps = 25/196 (12%)
Query: 9 PPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPA-ACG 67
PP+ + ++ LPS T+ PP+ L + P +HG SP P+ G
Sbjct: 1416 PPQTHVRNSSEQLSQKLPSVPTKLHCPPSPHLENPPKSSTPHTPVQHGYLSPKPPSQQLG 1475
Query: 68 HPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSP--NQKATS-----RNAPLSSKASY 120
P P +P P +P A P Q+ATS + S A+Y
Sbjct: 1476 SPYRP----HHSQSPQVGTPQREPQRNFYPAAQNLPANTQQATSGTLFTQTPSGQSSATY 1531
Query: 121 PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPV 180
Q S P PP PP P +S N P+A + + S ++ V
Sbjct: 1532 SQFNQQSLNSTAP--------PPPPPP--PPSSSYYQNQQPSANFQNYNQLKGSLSQQTV 1581
Query: 181 ---TKRDVLSGVPSEQ 193
L G S+Q
Sbjct: 1582 FTSGPNQALPGTTSQQ 1597
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 36.6 bits (83), Expect = 0.035
Identities = 41/129 (31%), Positives = 53/129 (41%), Gaps = 22/129 (17%)
Query: 10 PKLQISAPAQLSP---------HSLPS-SGTQFPNPPAHSLRHRPSRRRERDTKRHGASS 59
P+LQ+S P L P H L GT P P +S R S + R S+
Sbjct: 2029 PRLQLS-PLTLCPLGRELAPRAHVLSKLEGTTDPGLPRYSPTRRWSPGQAESPPR---SA 2084
Query: 60 PPKPAACGHPNAPCARDTADPAPLCSLTAFFPPGPL-HPIAARSPN------QKATSRNA 112
PP A P +P A + P FPP PL H + +RSP QKA SR+
Sbjct: 2085 PPGKWALAGPGSPSAGEHG-PGLGLDPRVLFPPAPLPHKLLSRSPETCASPWQKAESRSP 2143
Query: 113 PLSSKASYP 121
S ++P
Sbjct: 2144 SCSPGPAHP 2152
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 36.6 bits (83), Expect = 0.035
Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 35/183 (19%)
Query: 21 SPHSLP-SSGTQFPNPPAHSLRH--RPSRRRERDTKRHGASSPPKPAACGHPNAPCARDT 77
+P S P ++ TQ P+ P + + P +++D K A+ P
Sbjct: 308 APFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRP----------------- 350
Query: 78 ADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASYPQGPFHSRGQAKPLCLC 137
P+P S T PP P +A R PLS Q P + +A P
Sbjct: 351 -SPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLS------QEPVNPPSEASPT--- 400
Query: 138 LGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFAS-----PLEEPVTKRDVLSGVPSE 192
PP P + P +S +S+ +V R +S P P + R++ S S+
Sbjct: 401 RDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSK 460
Query: 193 QRN 195
R+
Sbjct: 461 NRS 463
>gi|32483397 dopamine receptor D4 [Homo sapiens]
Length = 419
Score = 36.2 bits (82), Expect = 0.046
Identities = 46/163 (28%), Positives = 58/163 (35%), Gaps = 39/163 (23%)
Query: 43 RPSRRRERDTKRHGASSPPKPA--ACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAA 100
R ++ R +R PP P A P PC D A PAP P GP P A
Sbjct: 226 RRAKLHGRAPRRPSGPGPPSPTPPAPRLPQDPCGPDCAPPAP------GLPRGPCGPDCA 279
Query: 101 RSPNQKATSRNAPLSSKASYPQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLV 160
+ AP S PQ P P C PPA P P PC SN
Sbjct: 280 PA---------AP-----SLPQDP------CGPDC-----APPA--PGLP-PDPCGSNCA 311
Query: 161 PNAAAEVFRDTFASPLEEPVTKRDVLSGVPSEQRNSLMVMEAV 203
P + R P P T+R + + +R ++ V+ V
Sbjct: 312 P---PDAVRAAALPPQTPPQTRRRRRAKITGRERKAMRVLPVV 351
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 35.8 bits (81), Expect = 0.060
Identities = 55/196 (28%), Positives = 69/196 (35%), Gaps = 20/196 (10%)
Query: 9 PPKLQISAPAQLSPHSLPSSGTQ----FPNPPAHSLRHRPSRRRERDTKRHGASSPPKPA 64
PPK + PA P S GT P PPA + T P P+
Sbjct: 1305 PPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPS 1364
Query: 65 ACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNA-PLSSKASYPQG 123
+ P P A + P A PP P A SP TS PLS K + P
Sbjct: 1365 SKEGPTPPAATPSHKGGP-----AMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKA-PAT 1418
Query: 124 PFHSRGQAKPLCLCLGLRPPAQPP----RFPSAS-PCQSNLVPNAAAE--VFRDTFASPL 176
P G A P L PPA P + P+ S P P++ + + T SP
Sbjct: 1419 PVTREGAATP--SKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPK 1476
Query: 177 EEPVTKRDVLSGVPSE 192
E P K+ S P +
Sbjct: 1477 EPPAPKQVATSSSPKK 1492
Score = 34.7 bits (78), Expect = 0.13
Identities = 49/191 (25%), Positives = 63/191 (32%), Gaps = 36/191 (18%)
Query: 10 PKLQISAPAQLSPHSLPSSGTQ--FPNPPAH---SLRHRPSRRRERDTKRHGASSPPKP- 63
PK + PA P +P+S + P PPA S + P+ + A++PP P
Sbjct: 918 PKKARATPA---PKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPK 974
Query: 64 ---AACGHPNAPCARDTADPAPLCSLTAFFPPGPLHPIAARSPNQKATSRNAPLSSKASY 120
A AP P+P P G P A P+ K + P AS
Sbjct: 975 GGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAS- 1033
Query: 121 PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEPV 180
PPA P P SP + L P A T SP P
Sbjct: 1034 --------------------TPPAATPPSPKGSPAATPL-PKGAPTTPAATLPSPKGGPA 1072
Query: 181 TKRDVLSGVPS 191
T L G P+
Sbjct: 1073 TPS--LKGAPT 1081
Score = 34.3 bits (77), Expect = 0.17
Identities = 52/216 (24%), Positives = 68/216 (31%), Gaps = 32/216 (14%)
Query: 17 PAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAACGHPNAPC-AR 75
PA SP P+S P P + P R T G +PP AP +
Sbjct: 1393 PAIPSPKGDPTSPAVIPLSPKKAPA-TPVTREGAATPSKGDLTPPAVTPVSLKKAPATSA 1451
Query: 76 DTADPAPLCS-----LTAFFPPGPLHP-----IAARSPNQKATSRNAPL----------S 115
PA S L A PP P P +A S +KA + AP+ S
Sbjct: 1452 PKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPS 1511
Query: 116 SKASYPQGPFHSRGQAKPLCLCLGLRPPAQ--------PPRFPSASPCQSNLVPNAAAEV 167
S P P R P L + PA PP SP ++ +P
Sbjct: 1512 SPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAP 1571
Query: 168 FRDTFASPLEEPVTKRDVLSGVPSEQRNSLMVMEAV 203
+ P G PS + L++ AV
Sbjct: 1572 ATPSSKEASSPPAVTPSTYKGAPSPK--ELLIPPAV 1605
Score = 34.3 bits (77), Expect = 0.17
Identities = 60/255 (23%), Positives = 96/255 (37%), Gaps = 53/255 (20%)
Query: 10 PKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPP---KPAAC 66
P+ PA+ P +L P P + + P+R+ + TK+ A+SPP P+A
Sbjct: 1666 PQASKGLPAKKGPTALKEVLVA-PAPESTPIITAPTRKGPQ-TKKSSATSPPICPDPSAK 1723
Query: 67 GHPNAPCARDTADPAPLCSL------------TAFFPPGPLHPIAARS------------ 102
P + T PAPL + + P GPL P +++
Sbjct: 1724 NGSKGPLS--TVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKV 1781
Query: 103 -PNQKATSRNAPLSSKASYPQGP-----FHSRGQAKPLCLCLGLRPPAQP---------- 146
P ++ S +A S S P P + Q P L L P++P
Sbjct: 1782 LPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDELL 1841
Query: 147 PRFP-----SASPCQSNLVPNAAAEVFRDTFASP-LEEPVTKRDVLSGVPSEQRNSLMVM 200
P P P QS LV + +P ++PVTK + SG S+ S+ +
Sbjct: 1842 PLIPPEPISGGVPFQSVLVNMPTPKSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVPEL 1901
Query: 201 EAVHFSEGTEKQLEV 215
E ++ T +Q ++
Sbjct: 1902 EEQDSTQATTQQAQL 1916
Score = 30.4 bits (67), Expect = 2.5
Identities = 43/154 (27%), Positives = 56/154 (36%), Gaps = 34/154 (22%)
Query: 9 PPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAACGH 68
PPK + PA P P G P P + P+ G + P P G
Sbjct: 1144 PPKGAPTTPAATPPS--PKGGLATPPP-----KGAPTTPAATPPSPKGGLATPSPK--GA 1194
Query: 69 PNAPCARDT------ADPAPLCSLT--AFFPPGPLHPIAARSPNQKATSRNAPLSSKASY 120
P P A A P+P + T A PP P +A SP + AP ++ A+
Sbjct: 1195 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP------KGAP-TTPAAT 1247
Query: 121 PQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASP 154
P P G A P PP P P+A+P
Sbjct: 1248 PPSP--KGGPATP--------PPKGAPTPPAATP 1271
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 35.4 bits (80), Expect = 0.078
Identities = 54/222 (24%), Positives = 73/222 (32%), Gaps = 38/222 (17%)
Query: 6 SRCPPKLQISAPAQLSPHSLPSSGTQFPNPPAHSLRHRPSRRRERDTKRHGASSPPKPAA 65
S CP I P H Q P P H ++ PS R H P +
Sbjct: 799 SSCPVNSPIMPPGSQGSHI---HCPQLPQPALH--QNSPSPVPSRTPTPHHT-----PPS 848
Query: 66 CGHPNAPCARDTADPAPLCSLTAFFPPGP----LHPIAARSPNQKATSRNAPLSSKASYP 121
G P T PAP+ + A PPGP LHP ++P T P + S P
Sbjct: 849 IGAQQPPA---TTIPAPVPTPPAM-PPGPQSQALHPPPRQTPTPPTTQ--LPQQVQPSLP 902
Query: 122 QGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFRDTFASPLEEP-V 180
P + P Q PR ++ VP A + A+PL +P V
Sbjct: 903 AAPSADQ--------------PQQQPRSQQSTAAS---VPTPTAPLLPPQPATPLSQPAV 945
Query: 181 TKRDVLSGVPSEQRNSLMVMEAVHFSEGTEKQLEVWFSWQQP 222
+ +S PS + E ++E QP
Sbjct: 946 SIEGQVSNPPSTSSTEVNSQAIAEKQPSQEVKMEAKMEVDQP 987
>gi|58530845 zyxin [Homo sapiens]
Length = 572
Score = 35.4 bits (80), Expect = 0.078
Identities = 44/168 (26%), Positives = 60/168 (35%), Gaps = 20/168 (11%)
Query: 2 TPYDSRCPPKLQISAPAQLSPHSLPSSGTQFPNPPAHS-----LRHRPSRRRERDTKRHG 56
TP+ S+ K A L P PSS P PA + +P + + + H
Sbjct: 179 TPFSSKSSTKPAAGGTAPLPPWKSPSSSQPLPQVPAPAQSQTQFHVQPQPQPKPQVQLHV 238
Query: 57 AS-SPPKPAACGHPNAPCARDTADPAPLCSLTAFFPP-----GPLHPIAARS-PNQKATS 109
S + P A P P A A +T F P P P + S PNQK
Sbjct: 239 QSQTQPVSLANTQPRGPPASSPAPAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKLGH 298
Query: 110 RNAPLSSKASYPQGPFHSRGQAKPLCLCLGLRPPAQPPRFPSASPCQS 157
A LS+ PQ P + Q + +P Q + P P Q+
Sbjct: 299 PEA-LSAGTGSPQPPSFTYAQQRE-------KPRVQEKQHPVPPPAQN 338
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,592,077
Number of Sequences: 37866
Number of extensions: 1005079
Number of successful extensions: 5418
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 457
Number of HSP's that attempted gapping in prelim test: 4851
Number of HSP's gapped (non-prelim): 938
length of query: 353
length of database: 18,247,518
effective HSP length: 103
effective length of query: 250
effective length of database: 14,347,320
effective search space: 3586830000
effective search space used: 3586830000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.