Guide to the Human Genome
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Search of human proteins with 169167808

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]
         (195 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]           406   e-114
gi|113417039 PREDICTED: hypothetical protein [Homo sapiens]           406   e-114
gi|113416520 PREDICTED: hypothetical protein [Homo sapiens]           406   e-114
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            47   8e-06
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]            46   2e-05
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ...    45   3e-05
gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo ...    45   3e-05
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ...    45   3e-05
gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo ...    45   3e-05
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]            45   4e-05
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              45   4e-05
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]            44   7e-05
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ...    44   1e-04
gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo ...    44   1e-04
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ...    44   1e-04
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]            44   1e-04
gi|57222570 codanin 1 [Homo sapiens]                                   43   1e-04
gi|23510368 homeobox D11 [Homo sapiens]                                42   3e-04
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s...    42   3e-04
gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ...    42   4e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             41   6e-04
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]     40   0.001
gi|145309320 forkhead box Q1 [Homo sapiens]                            40   0.001
gi|239508745 PREDICTED: hypothetical protein [Homo sapiens]            40   0.001
gi|221219048 transducin-like enhancer protein 2 isoform 2 [Homo ...    40   0.001
gi|21361151 transducin-like enhancer protein 2 isoform 1 [Homo s...    40   0.001
gi|84570137 homeobox B3 [Homo sapiens]                                 40   0.001
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        40   0.001
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      40   0.002
gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo ...    40   0.002

>gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score =  406 bits (1043), Expect = e-114
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60
           MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA
Sbjct: 1   MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60

Query: 61  RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
           RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER
Sbjct: 61  RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120

Query: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA 180
           PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA
Sbjct: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA 180

Query: 181 DSSQGMARLLTTTRS 195
           DSSQGMARLLTTTRS
Sbjct: 181 DSSQGMARLLTTTRS 195


>gi|113417039 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score =  406 bits (1043), Expect = e-114
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60
           MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA
Sbjct: 1   MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60

Query: 61  RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
           RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER
Sbjct: 61  RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120

Query: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA 180
           PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA
Sbjct: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA 180

Query: 181 DSSQGMARLLTTTRS 195
           DSSQGMARLLTTTRS
Sbjct: 181 DSSQGMARLLTTTRS 195


>gi|113416520 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score =  406 bits (1043), Expect = e-114
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60
           MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA
Sbjct: 1   MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60

Query: 61  RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
           RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER
Sbjct: 61  RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120

Query: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA 180
           PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA
Sbjct: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA 180

Query: 181 DSSQGMARLLTTTRS 195
           DSSQGMARLLTTTRS
Sbjct: 181 DSSQGMARLLTTTRS 195


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 49/163 (30%), Positives = 66/163 (40%), Gaps = 25/163 (15%)

Query: 12  QHGARPSEKPPRAAQRQGASRAGTGGS------GVLTPRAKGSTSRAESSAARGARVRAP 65
           + GA  + + P A  R G      GG       G   PR +G   +A  +AA G +    
Sbjct: 288 RRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQ--KATKAAAAGTK---- 341

Query: 66  GRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEK--RKWERPGK 123
               RGG G+   +  G          G+ P    AS  G   R G  +K  R+ +R G 
Sbjct: 342 ----RGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGD 397

Query: 124 ETWKPKTRRPRLRAPRAALLLPR------PRTHGP-AGGTRGG 159
              KP+ + PR RA +A    PR      PR  GP A  +RGG
Sbjct: 398 GRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGG 440



 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 47/189 (24%), Positives = 68/189 (35%), Gaps = 19/189 (10%)

Query: 16  RPSEKPPRAAQRQGASRAGTGGSGVLTPRAK-----GSTSRAESSAARGA-RVRAPGRTC 69
           R  +K   A ++  A+ AG    G   PR +     G+ SR   S +R   +  A G T 
Sbjct: 501 RRGQKAEAAGEK--ATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATS 558

Query: 70  RGGPGRGYESAAGNSLP----------SVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWE 119
            GG G       G + P             GGG + PG   A+      R+G G K+ W 
Sbjct: 559 HGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWR 618

Query: 120 RPGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAY 179
           +    T     ++P  R  + A    +    G      GG      QK     +E+  A 
Sbjct: 619 QKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGK-QPRWQKPAAAGSESSAAA 677

Query: 180 ADSSQGMAR 188
           A   +  AR
Sbjct: 678 AVGQEAEAR 686



 Score = 37.0 bits (84), Expect = 0.011
 Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 6/129 (4%)

Query: 14  GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGP 73
           GA  +  P   A    A       +GV    +     R + +AA G + R      RG  
Sbjct: 23  GAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKKARL-----RGQK 77

Query: 74  GRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEK-RKWERPGKETWKPKTRR 132
           G      A        G GG +  GG   +    G    G + RK  R G++     +++
Sbjct: 78  GAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSKK 137

Query: 133 PRLRAPRAA 141
           PR RA ++A
Sbjct: 138 PRWRAQKSA 146



 Score = 36.6 bits (83), Expect = 0.014
 Identities = 41/134 (30%), Positives = 55/134 (41%), Gaps = 17/134 (12%)

Query: 14  GARPSEKPPR-------AAQRQGASRAGTGGSGVLTPR-----AKGSTSRAESSAARGAR 61
           GA+  +KP R       AA++  A+ A + GSG   PR     A GS S A ++  + A 
Sbjct: 625 GAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAE 684

Query: 62  VR-APGRTCRGGPGRGYESAAGNSLPSVPGGG----GRDPGGGAASQPGLCGRAGTGEKR 116
            R  P R      G G ++AA    P    G     G+  GGG A   G  G    G   
Sbjct: 685 ARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGG 744

Query: 117 KWERPGKETWKPKT 130
              R GK+    K+
Sbjct: 745 AKSRSGKKAAASKS 758



 Score = 35.4 bits (80), Expect = 0.031
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 3/96 (3%)

Query: 20  KPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYES 79
           K PR  + +G   A + GSG    R  G         A  ++    G   R   G G +S
Sbjct: 716 KKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGG-GAKS 774

Query: 80  AAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEK 115
            +G    +V  GG +    G    P +  R G G+K
Sbjct: 775 RSGEK--AVTAGGQKAAAAGGKKPPRVKSRGGRGQK 808



 Score = 35.0 bits (79), Expect = 0.040
 Identities = 43/155 (27%), Positives = 61/155 (39%), Gaps = 16/155 (10%)

Query: 23  RAAQRQGASRAGT---GGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYES 79
           R    Q A+ AGT   GG G   PR +G   +A ++ ++  R RA      G   RG  +
Sbjct: 101 RGGGEQKAAAAGTKSLGGRG-RKPRRRGQ--KAAATGSKKPRWRAQKSAAAGSKNRGAGA 157

Query: 80  AAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERP-GKETWKPKTRRPRLR-- 136
               +   V   GG  P   AA+  G   R+G   +R+  +  G E  K + R  + R  
Sbjct: 158 QKAAAAAGVKSQGGEKPQKAAAA--GAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFG 215

Query: 137 ----APRAALLLPRPRTHGPAGGTRGGNLDTDTQK 167
                 R     P+P   G A   RGG      Q+
Sbjct: 216 KTRGGRRKKHRRPKPAA-GGAKSRRGGGKKPQKQR 249



 Score = 31.2 bits (69), Expect = 0.58
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 21/128 (16%)

Query: 16  RPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGR 75
           +P  + P+AA+ +G      GG     PR +G  +R +++ A        G   RG   +
Sbjct: 426 KPRRRGPKAAKSRGGKSRSGGGK---KPRRRGQKARQKAAEA--------GAESRGDKKQ 474

Query: 76  GYESAAGNSLPSVPGGGGRDPGGGAASQPGL-CGRAGTGEKRKWERPGKETWKPKTRR-P 133
           G + A+          G +  GGG  S  G    R G   +   E+      K + R+ P
Sbjct: 475 GRQKAS--------AAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQP 526

Query: 134 RLRAPRAA 141
           R + P  A
Sbjct: 527 RRQKPAVA 534



 Score = 30.8 bits (68), Expect = 0.76
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 14  GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGP 73
           G +P  + P AA  + ++ A  G       + +   +++     + A V       RG  
Sbjct: 658 GKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKK 717

Query: 74  GRGYESAAGNSLPSVPGGGGRDPG-GGAASQPGLCGRA-----GTGEKRK 117
            R  +S  G    S   GG +  G GGA S+ G    A     G G KR+
Sbjct: 718 PRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRR 767


>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 268

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 47/152 (30%), Positives = 54/152 (35%), Gaps = 26/152 (17%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
           PA  G +    P       G S  G    G   P A G+  R      R  R +  G  C
Sbjct: 57  PAVRGCKREGSP-------GVSAQGGPLEGTPRPAAPGAAPRPRRQRLRRRRAKVGGWGC 109

Query: 70  RGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPK 129
                RG +  A       PG GGR PGGG    PG  G  G        R      KP+
Sbjct: 110 --ARARGLDRRA-------PGEGGRSPGGGLEPSPGARGAVGAAPAAARHR------KPR 154

Query: 130 TRRPRLRAPRAALLLPRPRTHG--PAGGTRGG 159
            R    RAP+  L +  P   G   AGG  GG
Sbjct: 155 GR--SRRAPQMPLRVLPPILPGLSRAGGATGG 184



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 40/120 (33%), Positives = 47/120 (39%), Gaps = 22/120 (18%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGGSGV-----LTPRAKGSTSRAE------SSAAR 58
           PA  GA P  +  R  +R    RA  GG G      L  RA G   R+       S  AR
Sbjct: 83  PAAPGAAPRPRRQRLRRR----RAKVGGWGCARARGLDRRAPGEGGRSPGGGLEPSPGAR 138

Query: 59  GARVRAPG----RTCRGGPGRGYESAAGNSLPSVPG---GGGRDPGGGAASQPGLCGRAG 111
           GA   AP     R  RG   R  +       P +PG    GG   G G   + GL GR+G
Sbjct: 139 GAVGAAPAAARHRKPRGRSRRAPQMPLRVLPPILPGLSRAGGATGGRGLPGRRGLPGRSG 198


>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
           sapiens]
          Length = 304

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 57/172 (33%), Positives = 68/172 (39%), Gaps = 33/172 (19%)

Query: 17  PSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRA--PGRTCRGGP- 73
           P    P AA  + A R G GG G    R +G    A  S  RGAR R       CR    
Sbjct: 79  PRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCA-GSGGRGARSRGCHSPSCCRSSSC 137

Query: 74  ---------GRGYESAAGNSL---------PSVPGG---GGRDPGGGAA--SQPGLCGRA 110
                    GR  E  A  +L         P++P     G R   G AA  +QP LC  A
Sbjct: 138 AWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCS-A 196

Query: 111 GTGEKRKWERPGKETWKPKTRRPRLRA---PRAALLLPRPRTHGPAGGTRGG 159
           GT  + +  R    T  P+ R P LR+   PR    + RP     AGG RGG
Sbjct: 197 GTAARGRRTRASPPT-PPRPRPPGLRSGDVPRGGARVERPTGRRGAGG-RGG 246



 Score = 35.8 bits (81), Expect = 0.024
 Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 13/137 (9%)

Query: 20  KPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC--RGGPGRGY 77
           + P  A+R   S    GG     P A  +  RA S + RGA   A G     RGG G G 
Sbjct: 46  RAPLRAKRTVLSSPSLGGG----PAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGG 101

Query: 78  ESAA-GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
                G       G GGR         P  C  +     R  +  G+E        PR  
Sbjct: 102 RCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREA------EPRAS 155

Query: 137 APRAALLLPRPRTHGPA 153
                 + PRPR   PA
Sbjct: 156 PALLICIAPRPRPALPA 172


>gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo
           sapiens]
          Length = 492

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 46/158 (29%), Positives = 59/158 (37%), Gaps = 25/158 (15%)

Query: 10  PAQHGARPSEKPPR---AAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPG 66
           PA+   R    PPR   A    G++    G +GV TPR K    R      +G R+ AP 
Sbjct: 287 PARLPTRCLPSPPRSLVAPSESGSAGRRGGTNGVATPREKLGGKRGVGRKGQGTRLGAP- 345

Query: 67  RTCRGGPGRGYESAAGNSLPSVPG-GGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKET 125
                           +SLP  P    GR  GGG  S+  +        +R+WE    + 
Sbjct: 346 ----------------HSLPPPPPFRTGRGEGGGGGSRADVTAGRARPRRRRWEPLRAQR 389

Query: 126 WKPKTRRPRLRAPRAALLLPRPRTHGPAG-GTRGGNLD 162
                 RP   AP    L P    H  AG G  GG L+
Sbjct: 390 ---SGARPGAPAPPLPCLPPAAVCHALAGAGAPGGRLE 424


>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
           sapiens]
          Length = 304

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 57/172 (33%), Positives = 68/172 (39%), Gaps = 33/172 (19%)

Query: 17  PSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRA--PGRTCRGGP- 73
           P    P AA  + A R G GG G    R +G    A  S  RGAR R       CR    
Sbjct: 79  PRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCA-GSGGRGARSRGCHSPSCCRSSSC 137

Query: 74  ---------GRGYESAAGNSL---------PSVPGG---GGRDPGGGAA--SQPGLCGRA 110
                    GR  E  A  +L         P++P     G R   G AA  +QP LC  A
Sbjct: 138 AWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCS-A 196

Query: 111 GTGEKRKWERPGKETWKPKTRRPRLRA---PRAALLLPRPRTHGPAGGTRGG 159
           GT  + +  R    T  P+ R P LR+   PR    + RP     AGG RGG
Sbjct: 197 GTAARGRRTRASPPT-PPRPRPPGLRSGDVPRGGARVERPTGRRGAGG-RGG 246



 Score = 35.8 bits (81), Expect = 0.024
 Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 13/137 (9%)

Query: 20  KPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC--RGGPGRGY 77
           + P  A+R   S    GG     P A  +  RA S + RGA   A G     RGG G G 
Sbjct: 46  RAPLRAKRTVLSSPSLGGG----PAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGG 101

Query: 78  ESAA-GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
                G       G GGR         P  C  +     R  +  G+E        PR  
Sbjct: 102 RCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREA------EPRAS 155

Query: 137 APRAALLLPRPRTHGPA 153
                 + PRPR   PA
Sbjct: 156 PALLICIAPRPRPALPA 172


>gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo
           sapiens]
          Length = 492

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 46/158 (29%), Positives = 59/158 (37%), Gaps = 25/158 (15%)

Query: 10  PAQHGARPSEKPPR---AAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPG 66
           PA+   R    PPR   A    G++    G +GV TPR K    R      +G R+ AP 
Sbjct: 287 PARLPTRCLPSPPRSLVAPSESGSAGRRGGTNGVATPREKLGGKRGVGRKGQGTRLGAP- 345

Query: 67  RTCRGGPGRGYESAAGNSLPSVPG-GGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKET 125
                           +SLP  P    GR  GGG  S+  +        +R+WE    + 
Sbjct: 346 ----------------HSLPPPPPFRTGRGEGGGGGSRADVTAGRARPRRRRWEPLRAQR 389

Query: 126 WKPKTRRPRLRAPRAALLLPRPRTHGPAG-GTRGGNLD 162
                 RP   AP    L P    H  AG G  GG L+
Sbjct: 390 ---SGARPGAPAPPLPCLPPAAVCHALAGAGAPGGRLE 424


>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 480

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 35/115 (30%), Positives = 45/115 (39%), Gaps = 10/115 (8%)

Query: 12  QHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRG 71
           Q  A P+ +P   A        G        PR +   +R   +   GA  RA      G
Sbjct: 202 QETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAG 261

Query: 72  GPGRGYESAAGNSLPSVP-GGGGRDPGG-GAASQP--------GLCGRAGTGEKR 116
            PG G+      + P  P GGGGR+PG  G A+ P        GL G A  G +R
Sbjct: 262 RPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRR 316



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 40/138 (28%), Positives = 48/138 (34%), Gaps = 31/138 (22%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
           P   G +P+  PPR    Q  S  G   S    P+   + +      A  ARVR PGR  
Sbjct: 174 PVYLGNKPT--PPR----QEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAE 227

Query: 70  RG---------------GPGRGYES------AAGNSLPSVPGG----GGRDPGGGAASQP 104
                             PG G  S      AAG   P   GG      R PGGG    P
Sbjct: 228 GASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNP 287

Query: 105 GLCGRAGTGEKRKWERPG 122
           G  GRA    + + +  G
Sbjct: 288 GALGRAAPPSRARQDAWG 305



 Score = 28.5 bits (62), Expect = 3.8
 Identities = 32/106 (30%), Positives = 40/106 (37%), Gaps = 14/106 (13%)

Query: 14  GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESS-----AARGARVRAPGRT 68
           GA     PP  A++     +G    G+     +G   RA SS     +  G R R   R 
Sbjct: 288 GALGRAAPPSRARQDAWGLSGCATVGL----RRGDCDRAGSSQPPATSGNGERCRFCRRR 343

Query: 69  CRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGE 114
            R G G   E       P+ P G   D   GAA       RAG+GE
Sbjct: 344 RRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVL-----RAGSGE 384


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 20/137 (14%)

Query: 9    FPAQHGARPSEKPPRAAQRQGASRAGTGGSGV---LTPRAKGSTS-RAESSAARGARVRA 64
            F ++        PP     +     G GG G    ++  ++G  S RA+  + R    + 
Sbjct: 1330 FTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQRAKDLSKRSFSSQR 1389

Query: 65   PG---RTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERP 121
            PG   +  R GPG G   ++G+S     GGGG  PGG            G G+KR W  P
Sbjct: 1390 PGMERQNRRPGPG-GKAGSSGSS----SGGGGGGPGGRTGP--------GRGDKRSWPSP 1436

Query: 122  GKETWKPKTRRPRLRAP 138
               +  P+ R P L  P
Sbjct: 1437 KNRSRPPEERPPGLPLP 1453



 Score = 27.7 bits (60), Expect = 6.5
 Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 11/99 (11%)

Query: 70   RGGPGRGYESAAGNSLP-SVPGGG--------GRDPGGGAASQPGLCGRAGTGEKRKWER 120
            R    RG E     +LP S PG             P   AA  P L  +       +WE 
Sbjct: 1264 RENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDLSNQNSDQANEEWET 1323

Query: 121  PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGG 159
              + +     RR    AP   LL   P+  G  GG  GG
Sbjct: 1324 ASESSDFTSERRGDKEAPPPVLL--TPKAVGTPGGGGGG 1360


>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 316

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 56/172 (32%), Positives = 68/172 (39%), Gaps = 33/172 (19%)

Query: 17  PSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRA--PGRTCRGGP- 73
           P    P AA  + A R G GG G    R +G    A  S  RGAR R       CR    
Sbjct: 79  PRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCA-GSGGRGARSRGCHSPSCCRSSSC 137

Query: 74  ---------GRGYESAAGNSL---------PSVPGG---GGRDPGGGAA--SQPGLCGRA 110
                    GR  +  A  +L         P++P     G R   G AA  +QP LC  A
Sbjct: 138 AWHRWPQLRGREADPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCS-A 196

Query: 111 GTGEKRKWERPGKETWKPKTRRPRLRA---PRAALLLPRPRTHGPAGGTRGG 159
           GT  + +  R    T  P+ R P LR+   PR    + RP     AGG RGG
Sbjct: 197 GTAARGRRTRASPPT-PPRPRPPGLRSGDVPRGGARVERPTGRRGAGG-RGG 246



 Score = 35.0 bits (79), Expect = 0.040
 Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 13/137 (9%)

Query: 20  KPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC--RGGPGRGY 77
           + P  A+R   S    GG     P A  +  RA S + RGA   A G     RGG G G 
Sbjct: 46  RAPLRAKRTVLSSPSLGGG----PAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGG 101

Query: 78  ESAA-GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
                G       G GGR         P  C  +     R  +  G+E        PR  
Sbjct: 102 RCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREA------DPRAS 155

Query: 137 APRAALLLPRPRTHGPA 153
                 + PRPR   PA
Sbjct: 156 PALLICIAPRPRPALPA 172


>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
           sapiens]
          Length = 384

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 43/150 (28%), Positives = 57/150 (38%), Gaps = 16/150 (10%)

Query: 2   GCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGS-GVLTPRAKGSTSRAESSAARGA 60
           G EV G        RP+ +PP    R    R+G+G +   + PR     S        G+
Sbjct: 66  GTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS--------GS 117

Query: 61  RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
           R+R        GP  G  SA  +  P+ P    R   G AAS     G  G G  +   R
Sbjct: 118 RLRPAAP----GPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173

Query: 121 PGKETWKP---KTRRPRLRAPRAALLLPRP 147
           P +   +P     RR R    R+A    RP
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRP 203



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 50/197 (25%), Positives = 67/197 (34%), Gaps = 64/197 (32%)

Query: 15  ARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTS--------------------RAES 54
           A P+   P+AA R    RA +GGSG   P ++G  S                    R  +
Sbjct: 135 ASPAPAAPQAAARTAPGRAASGGSG---PGSRGQGSDQVGARPSRAGGQPPPLTCRRCRA 191

Query: 55  SAARGAR-VRAPG-------------RTCR-----GGPGRGYESAAGNSLPS-------- 87
           +  R AR  R PG             R+C      GGPG    S+      S        
Sbjct: 192 APRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIII 251

Query: 88  ------VPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERP-------GKETWKPKTRRPR 134
                 V G GGR    G  +QPG    +    +R++ +P       G  +       PR
Sbjct: 252 FGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRYRKPLTLSFGGGVSSPTHPVVAPR 311

Query: 135 LRAPRAALLLPRP-RTH 150
              PR+    P   RTH
Sbjct: 312 RHFPRSVPRFPAGFRTH 328


>gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo
           sapiens]
          Length = 209

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 43/150 (28%), Positives = 57/150 (38%), Gaps = 16/150 (10%)

Query: 2   GCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGS-GVLTPRAKGSTSRAESSAARGA 60
           G EV G        RP+ +PP    R    R+G+G +   + PR     S        G+
Sbjct: 66  GTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS--------GS 117

Query: 61  RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
           R+R        GP  G  SA  +  P+ P    R   G AAS     G  G G  +   R
Sbjct: 118 RLRPAAP----GPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173

Query: 121 PGKETWKP---KTRRPRLRAPRAALLLPRP 147
           P +   +P     RR R    R+A    RP
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRP 203


>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
           sapiens]
          Length = 384

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 43/150 (28%), Positives = 57/150 (38%), Gaps = 16/150 (10%)

Query: 2   GCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGS-GVLTPRAKGSTSRAESSAARGA 60
           G EV G        RP+ +PP    R    R+G+G +   + PR     S        G+
Sbjct: 66  GTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS--------GS 117

Query: 61  RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
           R+R        GP  G  SA  +  P+ P    R   G AAS     G  G G  +   R
Sbjct: 118 RLRPAAP----GPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173

Query: 121 PGKETWKP---KTRRPRLRAPRAALLLPRP 147
           P +   +P     RR R    R+A    RP
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRP 203



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 50/197 (25%), Positives = 67/197 (34%), Gaps = 64/197 (32%)

Query: 15  ARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTS--------------------RAES 54
           A P+   P+AA R    RA +GGSG   P ++G  S                    R  +
Sbjct: 135 ASPAPAAPQAAARTAPGRAASGGSG---PGSRGQGSDQVGARPSRAGGQPPPLTCRRCRA 191

Query: 55  SAARGAR-VRAPG-------------RTCR-----GGPGRGYESAAGNSLPS-------- 87
           +  R AR  R PG             R+C      GGPG    S+      S        
Sbjct: 192 APRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIII 251

Query: 88  ------VPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERP-------GKETWKPKTRRPR 134
                 V G GGR    G  +QPG    +    +R++ +P       G  +       PR
Sbjct: 252 FGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRYRKPLTLSFGGGVSSPTHPVVAPR 311

Query: 135 LRAPRAALLLPRP-RTH 150
              PR+    P   RTH
Sbjct: 312 RHFPRSVPRFPAGFRTH 328


>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 43/150 (28%), Positives = 57/150 (38%), Gaps = 16/150 (10%)

Query: 2   GCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGS-GVLTPRAKGSTSRAESSAARGA 60
           G EV G        RP+ +PP    R    R+G+G +   + PR     S        G+
Sbjct: 66  GTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS--------GS 117

Query: 61  RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
           R+R        GP  G  SA  +  P+ P    R   G AAS     G  G G  +   R
Sbjct: 118 RLRPAAP----GPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173

Query: 121 PGKETWKP---KTRRPRLRAPRAALLLPRP 147
           P +   +P     RR R    R+A    RP
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRP 203



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 50/197 (25%), Positives = 67/197 (34%), Gaps = 64/197 (32%)

Query: 15  ARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTS--------------------RAES 54
           A P+   P+AA R    RA +GGSG   P ++G  S                    R  +
Sbjct: 135 ASPAPAAPQAAARTAPGRAASGGSG---PGSRGQGSDQVGARPSRAGGQPPPLTCRRCRA 191

Query: 55  SAARGAR-VRAPG-------------RTCR-----GGPGRGYESAAGNSLPS-------- 87
           +  R AR  R PG             R+C      GGPG    S+      S        
Sbjct: 192 APRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIII 251

Query: 88  ------VPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERP-------GKETWKPKTRRPR 134
                 V G GGR    G  +QPG    +    +R++ +P       G  +       PR
Sbjct: 252 FGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRYRKPLTLSFGGGVSSPTHPVVAPR 311

Query: 135 LRAPRAALLLPRP-RTH 150
              PR+    P   RTH
Sbjct: 312 RHFPRSVPRFPAGFRTH 328


>gi|57222570 codanin 1 [Homo sapiens]
          Length = 1227

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 16/115 (13%)

Query: 5   VVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSR------AESSAA- 57
           ++ F   Q      + PP  A+  GAS A  G  G     ++G+ S+      A+S+AA 
Sbjct: 53  LLNFLREQSSRVLPQGPPTPAKTPGASAALPGRPGGPPRGSRGARSQLFPPTEAQSTAAE 112

Query: 58  -----RGARVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRD-PGGGAASQPGL 106
                RG R R PG     G GRG E   G S  S+PG GGR   G G+ S+P L
Sbjct: 113 APLARRGGRRRGPGPARERG-GRGLEE--GVSGESLPGAGGRRLRGSGSPSRPSL 164


>gi|23510368 homeobox D11 [Homo sapiens]
          Length = 338

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 32/87 (36%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 70  RGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPK 129
           RGG G G  SA G S    PGGGG   GG A         A      +     +E   P 
Sbjct: 76  RGGGGGG--SAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLPPA 133

Query: 130 TRRPRL--RAPRAALLLPRPRTHGPAG 154
            RRP +  +AP      P P  HGPAG
Sbjct: 134 GRRPDVLFKAPEPVCAAPGP-PHGPAG 159



 Score = 27.7 bits (60), Expect = 6.5
 Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 11/66 (16%)

Query: 17  PSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRG 76
           P+   P  A  +G  R G GG G  +P  K +       AA G+          GG G G
Sbjct: 199 PAPPQPEGAADKGDPRTGAGGGGG-SPCTKATPGSEPKGAAEGS----------GGDGEG 247

Query: 77  YESAAG 82
               AG
Sbjct: 248 PPGEAG 253


>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
           sapiens]
          Length = 940

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 48/168 (28%), Positives = 55/168 (32%), Gaps = 26/168 (15%)

Query: 1   MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESS----- 55
           +G  ++G  P   G  P    P    R G  R G G       R +G     E       
Sbjct: 662 VGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRGGRGGNEPPPPPPP 721

Query: 56  --AARGARVRAPGRTCRGGPGRGYESAAGNSLPSVPGGG-GRDPGGGAASQPGLCGRAGT 112
              ARG R        RGGPG G     G+     PGGG G   G      PG  G  G+
Sbjct: 722 FRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPG--GGMGS 779

Query: 113 GEKRKWERPGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGN 160
           G  R  E PG         RP                 GP GG  GG+
Sbjct: 780 GH-RPHEGPGGSMGGGGGHRPH---------------EGPGGGISGGS 811



 Score = 33.1 bits (74), Expect = 0.15
 Identities = 33/110 (30%), Positives = 38/110 (34%), Gaps = 8/110 (7%)

Query: 14  GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGP 73
           G RP E P          R   G  G +     GS  R       G+     G     GP
Sbjct: 750 GHRPHEGPGGGMGNSSGHRPHEGPGGGM-----GSGHRPHEGPG-GSMGGGGGHRPHEGP 803

Query: 74  GRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCG-RAGTGEKRKWERPG 122
           G G    +G+  P    GGG   GGG     G  G   G+G  R  E PG
Sbjct: 804 GGGISGGSGHR-PHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPG 852


>gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo
           sapiens]
          Length = 536

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 33/92 (35%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 50  SRAESSAARGARVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGR 109
           S  E   A GA  R  G+   G  G G  S  G   P+ PG  G    G A S  G  GR
Sbjct: 37  SFCEPCMAPGA-ARGRGKPALGAHGAGCSSMGGAPPPTDPGRAGLRSWGAAGSARGSEGR 95

Query: 110 AGTGEKRKWERPGKETWKPKTRRPRLRAPRAA 141
             + + R   RP        +RR R RAPR A
Sbjct: 96  PSSRQARPLRRP--------SRRARRRAPRCA 119



 Score = 31.2 bits (69), Expect = 0.58
 Identities = 50/185 (27%), Positives = 61/185 (32%), Gaps = 43/185 (23%)

Query: 2   GCEVVGFFPAQHGARPSEKPPRAAQRQ-GASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60
           GC  +G      GA P   P RA  R  GA+ +  G  G    R     +R     +R A
Sbjct: 62  GCSSMG------GAPPPTDPGRAGLRSWGAAGSARGSEG----RPSSRQARPLRRPSRRA 111

Query: 61  RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGG--------------------GA 100
           R RAP    R  P R    +A    P   G G R   G                      
Sbjct: 112 RRRAP----RCAPDRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLDPFTRPRFPLQFFQG 167

Query: 101 ASQPGLCGRAGTGEKRKWERPGKE---TWKPKTRRPRLRAPRAALLLPRPRTH---GPAG 154
             QP  C   G  E R+W   G +      P  + P    P +   LP  + H    P G
Sbjct: 168 CPQPSRC--LGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLG 225

Query: 155 GTRGG 159
             RGG
Sbjct: 226 CCRGG 230



 Score = 29.3 bits (64), Expect = 2.2
 Identities = 31/119 (26%), Positives = 40/119 (33%), Gaps = 16/119 (13%)

Query: 22  PRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYESAA 81
           PR  +  G    G    G+  P   G  S A   A +  +   P   CRGG  +      
Sbjct: 180 PRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPR 239

Query: 82  GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLRAPRA 140
           G  LP    G GRD    A            G+     R    ++ P+ R P   AP A
Sbjct: 240 GLCLP----GRGRDRAVEA------------GDAVAQVRVQSHSFAPRPRAPLAVAPAA 282


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 47/150 (31%), Positives = 58/150 (38%), Gaps = 22/150 (14%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
           PA+    PS +   ++Q +G   AG  G      R +   SR+ +SA R    R P    
Sbjct: 357 PARGKESPSPRSAPSSQGRGGRAAGGAGRR-RRRRRRRRRSRSSASAPRRRGRRRP---- 411

Query: 70  RGGPGRGYESAAGNSLPSVPGGGGR-DPGGGAASQPGLCGRAGTGEKRKWERPGKETWKP 128
           R  P RG   +   +  S   G GR  PG G   +PG     G   KR  ERP       
Sbjct: 412 RPAPPRGSSRSLSRARSSSDSGSGRGAPGPG--PEPGSERGHGGHGKRAKERP------- 462

Query: 129 KTRRPRLRAPRAALLLPRPRTHGPAGGTRG 158
               PR    R A   P P  HG  GG  G
Sbjct: 463 ----PR---ARPASTSPSPGAHGRRGGPEG 485



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 43/153 (28%), Positives = 58/153 (37%), Gaps = 25/153 (16%)

Query: 25  AQRQGASRAGT--GGSGVLTP-RAKGSTSRAESSAARGARVRAP---------------G 66
           +QR   SR+ +  GGSG  +P R  GS  R+ +   R     +P                
Sbjct: 291 SQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAA 350

Query: 67  RTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETW 126
                 P RG ES +  S PS  G GGR  GG          R     +R+         
Sbjct: 351 AAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRR------RRRRRRRRRSRSSASAPR 404

Query: 127 KPKTRRPRLRAPR-AALLLPRPRTHGPAGGTRG 158
           +   RRPR   PR ++  L R R+   +G  RG
Sbjct: 405 RRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRG 437


>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
          Length = 532

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 9/102 (8%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
           PA      S  PP         ++ +     L+P A  + + A ++AA  + V   G + 
Sbjct: 426 PAASSGYESSTPPGLVSPSAEPQSSSN----LSPAAAAAAAAAAAAAAAVSAVHRGGGSG 481

Query: 70  RGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAG 111
            GG G G    +G+      GGGG   GGG  S  G  G AG
Sbjct: 482 SGGAGGGSGGGSGSG-----GGGGGAGGGGGGSSGGGSGTAG 518



 Score = 31.6 bits (70), Expect = 0.45
 Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 13/104 (12%)

Query: 19  EKPPRAAQRQGASRAGTGGS---GVLTPRAKGSTSR------AESSAARGARVRAPGRTC 69
           E  P+ ++   A+ +G   S   G+++P A+  +S       A ++AA  A   A     
Sbjct: 416 ESSPQGSESSPAASSGYESSTPPGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVH 475

Query: 70  RGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTG 113
           RGG G G   A G S     G G    GGGA    G     G+G
Sbjct: 476 RGG-GSGSGGAGGGS---GGGSGSGGGGGGAGGGGGGSSGGGSG 515


>gi|145309320 forkhead box Q1 [Homo sapiens]
          Length = 403

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 42/139 (30%), Positives = 53/139 (38%), Gaps = 13/139 (9%)

Query: 22  PRAAQ--RQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYES 79
           PRAA   +QG+   G GGS   +P +        S     A   A G   R   G G +S
Sbjct: 8   PRAAHGDKQGSDLEGAGGSDAPSPLSAAGDDSLGSDGDCAANSPAAGGGARDTQGDGEQS 67

Query: 80  AAGNSLPSVPGGGGRDPGGGAA---SQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
           A G      PG     P   AA   ++    G AG G        G  + KP TRRP  +
Sbjct: 68  AGGG-----PGAEEAIPAAAAAAVVAEGAEAGAAGPGAGGAGSGEGARS-KPYTRRP--K 119

Query: 137 APRAALLLPRPRTHGPAGG 155
            P + + L        AGG
Sbjct: 120 PPYSYIALIAMAIRDSAGG 138


>gi|239508745 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 249

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 37/113 (32%), Positives = 45/113 (39%), Gaps = 7/113 (6%)

Query: 2   GCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSG----VLTPRAKGSTSRAESSAA 57
           G  ++  FP+      S     A + Q       G  G    V  PR  GS   A+ +AA
Sbjct: 85  GFLLIALFPSSQNRHRSAGRGLAGRLQQVRPGAAGPRGRLPWVTGPRPAGSLPAAQFAAA 144

Query: 58  RGARVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRA 110
            GA  RA  R  R   GR    AAG   P   GG G   G   AS  G+ G+A
Sbjct: 145 SGA-ARAGRRRERACAGRSAGDAAGPEAPQPTGGRGCSRGSATAS--GVGGKA 194



 Score = 27.3 bits (59), Expect = 8.4
 Identities = 39/160 (24%), Positives = 56/160 (35%), Gaps = 21/160 (13%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
           P QHG  P    P A + +  ++A +       P      ++     A   R   PG   
Sbjct: 3   PGQHGVAP----PPAGRERLQNKAWSPAPAPARP----PLNQPPGGKALSTRALQPGGAL 54

Query: 70  RGGP--GR-GYESAAGNSLPSVPGGGGRDPG-------GGAASQPGLCGRAGTGEKRKWE 119
             G   GR G+        PS P G     G         + ++    GR   G  ++  
Sbjct: 55  EAGTRGGREGHRRLRQPPTPSAPPGSPLHEGFLLIALFPSSQNRHRSAGRGLAGRLQQ-V 113

Query: 120 RPGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGG 159
           RPG     P+ R P +  PR A  LP  +    +G  R G
Sbjct: 114 RPGAAG--PRGRLPWVTGPRPAGSLPAAQFAAASGAARAG 151


>gi|221219048 transducin-like enhancer protein 2 isoform 2 [Homo
           sapiens]
          Length = 706

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGG-SGVLTPRAKGSTSRAESSA---ARGARV-RA 64
           P  H A P    PR A   G S  G    SG L  +A+ + +  E  A   A G+RV RA
Sbjct: 142 PLSHHAPPVPLTPRPAGLVGGSATGLLALSGALAAQAQLAAAVKEDRAGVEAEGSRVERA 201

Query: 65  PGRTCRGGPGRGYESAAGNSLPSVPGGGGR 94
           P R+    P    ES      PS PGGGG+
Sbjct: 202 PSRSASPSPP---ESLVEEERPSGPGGGGK 228


>gi|21361151 transducin-like enhancer protein 2 isoform 1 [Homo
           sapiens]
          Length = 743

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGG-SGVLTPRAKGSTSRAESSA---ARGARV-RA 64
           P  H A P    PR A   G S  G    SG L  +A+ + +  E  A   A G+RV RA
Sbjct: 128 PLSHHAPPVPLTPRPAGLVGGSATGLLALSGALAAQAQLAAAVKEDRAGVEAEGSRVERA 187

Query: 65  PGRTCRGGPGRGYESAAGNSLPSVPGGGGR 94
           P R+    P    ES      PS PGGGG+
Sbjct: 188 PSRSASPSPP---ESLVEEERPSGPGGGGK 214


>gi|84570137 homeobox B3 [Homo sapiens]
          Length = 431

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 35/117 (29%), Positives = 42/117 (35%), Gaps = 19/117 (16%)

Query: 3   CEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLT--PRAKGSTSRA-------- 52
           C   G  P    A P   PP AA     S +  GG    +  P+    T+          
Sbjct: 73  CMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPGTNSTLTKQIFPW 132

Query: 53  --ESSAARGARVRAPGRT--CRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPG 105
             ES      +  +PG    C GG G G    +G S     GGGG   GGG  S PG
Sbjct: 133 MKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGS-----GGGGGGGGGGDKSPPG 184


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 44/170 (25%), Positives = 66/170 (38%), Gaps = 14/170 (8%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
           PA+ G   S  P   A+R+  SR  T         A+   SR+ + A R +R R+P R  
Sbjct: 578 PARRGRSRSRTP---ARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVR-- 632

Query: 70  RGGPGRGYESAAGNSLPSVPGGGGRDPGG-----GAASQPGLCGRAGTGEKRKWERPGKE 124
           R    R     +G S    P   GR         G +       R+G    R   R G+ 
Sbjct: 633 RRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRS 692

Query: 125 TWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTE 174
               ++R PR    R+  L+ R R+H      RG +  +  +K    T++
Sbjct: 693 ----RSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQ 738



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 39/150 (26%), Positives = 53/150 (35%), Gaps = 13/150 (8%)

Query: 16  RPSEKPPRAAQRQGASR------------AGTGGSGVLTPRAKGSTSRAESSAARGARVR 63
           RP     R  QR+G SR            A  G S   TP  +G  SR+ + A R +R R
Sbjct: 539 RPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRG-RSRSRTPARRRSRSR 597

Query: 64  APGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGK 123
            P R             + +  P+      R P    +       R+G    R   R G+
Sbjct: 598 TPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGR 657

Query: 124 ETWKPKTRRPRLRAPRAALLLPRPRTHGPA 153
              +   RR R R+   A    R R+  PA
Sbjct: 658 SRSRTPARRGRSRSRTPARRSGRSRSRTPA 687



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGT----GGSGVLTPRAKGSTSRAESSAARGARVRAP 65
           PA+   R   + P    R+G SR+ T    G S   TP  +   SR+ + A RG   R+ 
Sbjct: 640 PARRSGRSRSRTPA---RRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRG---RSR 693

Query: 66  GRTCRGGPGRGYESA-AGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKE 124
            RT R G  R       G S    P   GR    G++S+     R      R    P  +
Sbjct: 694 SRTPRRGRSRSRSLVRRGRSHSRTPQRRGR---SGSSSERKNKSRTSQRRSRSNSSPEMK 750

Query: 125 TWKPKTRRPR-LRAPRA 140
             +  +RR R L +PR+
Sbjct: 751 KSRISSRRSRSLSSPRS 767


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 20/121 (16%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPR----------AKGSTSRAESSAARG 59
           P   G   ++ PP      G+     GG G + P           A+G    A ++ A G
Sbjct: 371 PGPQGHAGAQGPPGPPGINGSP----GGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPG 426

Query: 60  ARVRA--PGRT-CRGGPG-RGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEK 115
            R  A  PG+   +G PG RG    AG  +P VPG  G D   G+  +PG  G  G   +
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAG--IPGVPGAKGEDGKDGSPGEPGANGLPGAAGE 484

Query: 116 R 116
           R
Sbjct: 485 R 485



 Score = 35.8 bits (81), Expect = 0.024
 Identities = 45/147 (30%), Positives = 54/147 (36%), Gaps = 14/147 (9%)

Query: 14  GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGP 73
           G +    PP     QG    GTGG     P   G           GA     G+   G P
Sbjct: 627 GDKGDTGPPGPQGLQGLP--GTGGP----PGENGKPGEPGPKGDAGAPGAPGGKGDAGAP 680

Query: 74  G-RGYESAAGNSLPSVPGGGGR---DPGGGAASQPGLCGRAGTG--EKRKWERPGKETWK 127
           G RG    AG   P + GG G    + G GAA  PG  G AGT   +    ER G  +  
Sbjct: 681 GERGPPGLAG--APGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPG 738

Query: 128 PKTRRPRLRAPRAALLLPRPRTHGPAG 154
           PK  +     P A  +  +    GP G
Sbjct: 739 PKGDKGEPGGPGADGVPGKDGPRGPTG 765



 Score = 35.4 bits (80), Expect = 0.031
 Identities = 40/145 (27%), Positives = 45/145 (31%), Gaps = 21/145 (14%)

Query: 17  PSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRG 76
           P  K    A  +   R G GG G   P  K   +  +           PG T  GG    
Sbjct: 581 PGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGP---------PGPTGPGGDKGD 631

Query: 77  YESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
                   L  +PG GG     G   +PG  G AG         PG    K     P  R
Sbjct: 632 TGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGA--------PGAPGGKGDAGAPGER 683

Query: 137 APRAALLLPRPRTHGPAG--GTRGG 159
            P    L   P   G AG  G  GG
Sbjct: 684 GPPG--LAGAPGLRGGAGPPGPEGG 706



 Score = 33.9 bits (76), Expect = 0.090
 Identities = 32/95 (33%), Positives = 37/95 (38%), Gaps = 14/95 (14%)

Query: 22  PRAAQRQGAS--RAGTGGSGVLTPRAKGSTSRAESSAARGARVRA--PGRT-CRGGPGRG 76
           P AA  +GA   R   G +G+  P  KG      +    G R  A  PGR    GGPG  
Sbjct: 479 PGAAGERGAPGFRGPAGPNGI--PGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGM- 535

Query: 77  YESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAG 111
                   +P  PGG G D   G     G  GR G
Sbjct: 536 ------RGMPGSPGGPGSDGKPGPPGSQGESGRPG 564



 Score = 33.1 bits (74), Expect = 0.15
 Identities = 34/111 (30%), Positives = 40/111 (36%), Gaps = 13/111 (11%)

Query: 14  GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGP 73
           GA     PP AA   G         G+ +P  KG         A G     PG+    GP
Sbjct: 708 GAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGV----PGKDGPRGP 763

Query: 74  GRGYESAAGNSLPSVPGGGGRDPG-GGAASQPGLCG-RAGTGEKRKWERPG 122
                   G   P  P G   D G GGA   PG+ G R   GE+ +   PG
Sbjct: 764 -------TGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPG 807



 Score = 31.2 bits (69), Expect = 0.58
 Identities = 34/102 (33%), Positives = 38/102 (37%), Gaps = 14/102 (13%)

Query: 17  PSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRG 76
           P    PR +  +       G +G   P A G          RGA    PG    GGP  G
Sbjct: 788 PGIAGPRGSPGERGETGPPGPAGF--PGAPGQNGEPGGKGERGA----PGEKGEGGP-PG 840

Query: 77  YESAAGNSLPSVPGG-----GGR-DPGG-GAASQPGLCGRAG 111
                G S P+ P G     G R  PGG GAA  PG  G  G
Sbjct: 841 VAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPG 882



 Score = 31.2 bits (69), Expect = 0.58
 Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 14/104 (13%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGGS-GVLTPRAKGSTSRAESSAARGARVRAPGRT 68
           P Q+G     +P    +R      G GG  GV  P   G +  A     +G +     R 
Sbjct: 815 PGQNG-----EPGGKGERGAPGEKGEGGPPGVAGP--PGGSGPAGPPGPQGVKGE---RG 864

Query: 69  CRGGPGR-GYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAG 111
             GGPG  G+  A G  LP  PG  G     G +  PG  G  G
Sbjct: 865 SPGGPGAAGFPGARG--LPGPPGSNGNPGPPGPSGSPGKDGPPG 906



 Score = 28.9 bits (63), Expect = 2.9
 Identities = 31/105 (29%), Positives = 36/105 (34%), Gaps = 19/105 (18%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVR--APGR 67
           PA     P  K  R    +   +  TG  G+     KG       + A G      APG 
Sbjct: 253 PAGIPGFPGMKGHRGFDGRNGEKGETGAPGL-----KGENGLPGENGAPGPMGPRGAPGE 307

Query: 68  TCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGT 112
             RG PG          LP   G  G D   G+  QPG  G  GT
Sbjct: 308 --RGRPG----------LPGAAGARGNDGARGSDGQPGPPGPPGT 340



 Score = 27.3 bits (59), Expect = 8.4
 Identities = 31/104 (29%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 10   PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPR-AKGSTSRAESSAARGARVRAPGRT 68
            P   GA     PP      G S    G SG   P  A G      +   +G R       
Sbjct: 1040 PGAPGAPGHPGPPGPVGPAGKS-GDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETG 1098

Query: 69   CRGGPG-RGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAG 111
             RG  G +G+    GN  P  PG  G     GA   PG  G  G
Sbjct: 1099 ERGAAGIKGHRGFPGN--PGAPGSPGPAGQQGAIGSPGPAGPRG 1140


>gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo
           sapiens]
          Length = 316

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 12/110 (10%)

Query: 16  RPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGR 75
           R   KP R  Q+  A+ A + G G   PR +     A + A  G   +   R  R  PGR
Sbjct: 171 RRGRKPRRRGQKSTAAGAKSRGEGGKKPRQQ---KPAAAGAKSGLGDKKSRRWGRKKPGR 227

Query: 76  -GYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKE 124
            G E+ AG +     GGGG+ P   AA  PG   ++    +R+W++   E
Sbjct: 228 WGQEAVAGETC----GGGGKKPQKAAA--PG--AKSHKKPRRQWQKAAAE 269



 Score = 33.9 bits (76), Expect = 0.090
 Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 6/109 (5%)

Query: 22  PRAAQRQGASRAGTG--GSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGR--GY 77
           PR    Q ASR+G+    S   T    G   R +  AA GA+ R   +  RG   R  G 
Sbjct: 122 PRHCISQDASRSGSRVCRSRPQTRGGGGKKPRRQKDAAAGAKSRGGKKPRRGRKPRRRGQ 181

Query: 78  ESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETW 126
           +S A  +     G GG+ P     +  G     G  + R+W R     W
Sbjct: 182 KSTAAGAKSR--GEGGKKPRQQKPAAAGAKSGLGDKKSRRWGRKKPGRW 228



 Score = 32.3 bits (72), Expect = 0.26
 Identities = 36/141 (25%), Positives = 50/141 (35%), Gaps = 23/141 (16%)

Query: 10  PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
           P  H  R   +   AA  Q  S  G G  G   P  +  T             R+  R C
Sbjct: 80  PLSHRGRAQRRSMHAAAAQERS-LGRGCLGKEPPNRESWTRSDPRHCISQDASRSGSRVC 138

Query: 70  RGGPGRGYESAAGNSLPSVPGGGGRDP------GGGAASQPGLCGRAGTGEKRKWER--- 120
           R             S P   GGGG+ P        GA S+ G   R G   +R+ ++   
Sbjct: 139 R-------------SRPQTRGGGGKKPRRQKDAAAGAKSRGGKKPRRGRKPRRRGQKSTA 185

Query: 121 PGKETWKPKTRRPRLRAPRAA 141
            G ++     ++PR + P AA
Sbjct: 186 AGAKSRGEGGKKPRQQKPAAA 206



 Score = 28.9 bits (63), Expect = 2.9
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 11  AQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRA-KGSTSRAESSAARGARVRAPGRTC 69
           A  GA+  +KP R  Q+  A +    G+     R  K + +RA+S    G + R  G+  
Sbjct: 249 AAPGAKSHKKPRRQWQKAAAEKVAVAGAESCGGRGQKAAAARAKSGGFGGKKQRRRGQRA 308

Query: 70  ---RGGPG 74
              RGG G
Sbjct: 309 PKSRGGRG 316


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.132    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,573,482
Number of Sequences: 37866
Number of extensions: 678111
Number of successful extensions: 6414
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 809
Number of HSP's that attempted gapping in prelim test: 4139
Number of HSP's gapped (non-prelim): 2479
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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