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Search of human proteins with 169167808
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]
(195 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169167808 PREDICTED: hypothetical protein [Homo sapiens] 406 e-114
gi|113417039 PREDICTED: hypothetical protein [Homo sapiens] 406 e-114
gi|113416520 PREDICTED: hypothetical protein [Homo sapiens] 406 e-114
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 47 8e-06
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 46 2e-05
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 45 3e-05
gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo ... 45 3e-05
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 45 3e-05
gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo ... 45 3e-05
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 45 4e-05
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 45 4e-05
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 44 7e-05
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 44 1e-04
gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo ... 44 1e-04
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 44 1e-04
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|57222570 codanin 1 [Homo sapiens] 43 1e-04
gi|23510368 homeobox D11 [Homo sapiens] 42 3e-04
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 42 3e-04
gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ... 42 4e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 41 6e-04
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 40 0.001
gi|145309320 forkhead box Q1 [Homo sapiens] 40 0.001
gi|239508745 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|221219048 transducin-like enhancer protein 2 isoform 2 [Homo ... 40 0.001
gi|21361151 transducin-like enhancer protein 2 isoform 1 [Homo s... 40 0.001
gi|84570137 homeobox B3 [Homo sapiens] 40 0.001
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 0.001
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 40 0.002
gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo ... 40 0.002
>gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 406 bits (1043), Expect = e-114
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 1 MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60
MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA
Sbjct: 1 MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60
Query: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER
Sbjct: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
Query: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA 180
PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA
Sbjct: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA 180
Query: 181 DSSQGMARLLTTTRS 195
DSSQGMARLLTTTRS
Sbjct: 181 DSSQGMARLLTTTRS 195
>gi|113417039 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 406 bits (1043), Expect = e-114
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 1 MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60
MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA
Sbjct: 1 MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60
Query: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER
Sbjct: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
Query: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA 180
PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA
Sbjct: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA 180
Query: 181 DSSQGMARLLTTTRS 195
DSSQGMARLLTTTRS
Sbjct: 181 DSSQGMARLLTTTRS 195
>gi|113416520 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 406 bits (1043), Expect = e-114
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 1 MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60
MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA
Sbjct: 1 MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60
Query: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER
Sbjct: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
Query: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA 180
PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA
Sbjct: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAYA 180
Query: 181 DSSQGMARLLTTTRS 195
DSSQGMARLLTTTRS
Sbjct: 181 DSSQGMARLLTTTRS 195
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 47.4 bits (111), Expect = 8e-06
Identities = 49/163 (30%), Positives = 66/163 (40%), Gaps = 25/163 (15%)
Query: 12 QHGARPSEKPPRAAQRQGASRAGTGGS------GVLTPRAKGSTSRAESSAARGARVRAP 65
+ GA + + P A R G GG G PR +G +A +AA G +
Sbjct: 288 RRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQ--KATKAAAAGTK---- 341
Query: 66 GRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEK--RKWERPGK 123
RGG G+ + G G+ P AS G R G +K R+ +R G
Sbjct: 342 ----RGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGD 397
Query: 124 ETWKPKTRRPRLRAPRAALLLPR------PRTHGP-AGGTRGG 159
KP+ + PR RA +A PR PR GP A +RGG
Sbjct: 398 GRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGG 440
Score = 44.3 bits (103), Expect = 7e-05
Identities = 47/189 (24%), Positives = 68/189 (35%), Gaps = 19/189 (10%)
Query: 16 RPSEKPPRAAQRQGASRAGTGGSGVLTPRAK-----GSTSRAESSAARGA-RVRAPGRTC 69
R +K A ++ A+ AG G PR + G+ SR S +R + A G T
Sbjct: 501 RRGQKAEAAGEK--ATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATS 558
Query: 70 RGGPGRGYESAAGNSLP----------SVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWE 119
GG G G + P GGG + PG A+ R+G G K+ W
Sbjct: 559 HGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWR 618
Query: 120 RPGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTETDPAY 179
+ T ++P R + A + G GG QK +E+ A
Sbjct: 619 QKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGK-QPRWQKPAAAGSESSAAA 677
Query: 180 ADSSQGMAR 188
A + AR
Sbjct: 678 AVGQEAEAR 686
Score = 37.0 bits (84), Expect = 0.011
Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 6/129 (4%)
Query: 14 GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGP 73
GA + P A A +GV + R + +AA G + R RG
Sbjct: 23 GAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKKARL-----RGQK 77
Query: 74 GRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEK-RKWERPGKETWKPKTRR 132
G A G GG + GG + G G + RK R G++ +++
Sbjct: 78 GAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSKK 137
Query: 133 PRLRAPRAA 141
PR RA ++A
Sbjct: 138 PRWRAQKSA 146
Score = 36.6 bits (83), Expect = 0.014
Identities = 41/134 (30%), Positives = 55/134 (41%), Gaps = 17/134 (12%)
Query: 14 GARPSEKPPR-------AAQRQGASRAGTGGSGVLTPR-----AKGSTSRAESSAARGAR 61
GA+ +KP R AA++ A+ A + GSG PR A GS S A ++ + A
Sbjct: 625 GAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAE 684
Query: 62 VR-APGRTCRGGPGRGYESAAGNSLPSVPGGG----GRDPGGGAASQPGLCGRAGTGEKR 116
R P R G G ++AA P G G+ GGG A G G G
Sbjct: 685 ARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGG 744
Query: 117 KWERPGKETWKPKT 130
R GK+ K+
Sbjct: 745 AKSRSGKKAAASKS 758
Score = 35.4 bits (80), Expect = 0.031
Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Query: 20 KPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYES 79
K PR + +G A + GSG R G A ++ G R G G +S
Sbjct: 716 KKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGG-GAKS 774
Query: 80 AAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEK 115
+G +V GG + G P + R G G+K
Sbjct: 775 RSGEK--AVTAGGQKAAAAGGKKPPRVKSRGGRGQK 808
Score = 35.0 bits (79), Expect = 0.040
Identities = 43/155 (27%), Positives = 61/155 (39%), Gaps = 16/155 (10%)
Query: 23 RAAQRQGASRAGT---GGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYES 79
R Q A+ AGT GG G PR +G +A ++ ++ R RA G RG +
Sbjct: 101 RGGGEQKAAAAGTKSLGGRG-RKPRRRGQ--KAAATGSKKPRWRAQKSAAAGSKNRGAGA 157
Query: 80 AAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERP-GKETWKPKTRRPRLR-- 136
+ V GG P AA+ G R+G +R+ + G E K + R + R
Sbjct: 158 QKAAAAAGVKSQGGEKPQKAAAA--GAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFG 215
Query: 137 ----APRAALLLPRPRTHGPAGGTRGGNLDTDTQK 167
R P+P G A RGG Q+
Sbjct: 216 KTRGGRRKKHRRPKPAA-GGAKSRRGGGKKPQKQR 249
Score = 31.2 bits (69), Expect = 0.58
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 21/128 (16%)
Query: 16 RPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGR 75
+P + P+AA+ +G GG PR +G +R +++ A G RG +
Sbjct: 426 KPRRRGPKAAKSRGGKSRSGGGK---KPRRRGQKARQKAAEA--------GAESRGDKKQ 474
Query: 76 GYESAAGNSLPSVPGGGGRDPGGGAASQPGL-CGRAGTGEKRKWERPGKETWKPKTRR-P 133
G + A+ G + GGG S G R G + E+ K + R+ P
Sbjct: 475 GRQKAS--------AAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQP 526
Query: 134 RLRAPRAA 141
R + P A
Sbjct: 527 RRQKPAVA 534
Score = 30.8 bits (68), Expect = 0.76
Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 14 GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGP 73
G +P + P AA + ++ A G + + +++ + A V RG
Sbjct: 658 GKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKK 717
Query: 74 GRGYESAAGNSLPSVPGGGGRDPG-GGAASQPGLCGRA-----GTGEKRK 117
R +S G S GG + G GGA S+ G A G G KR+
Sbjct: 718 PRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRR 767
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 46.2 bits (108), Expect = 2e-05
Identities = 47/152 (30%), Positives = 54/152 (35%), Gaps = 26/152 (17%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
PA G + P G S G G P A G+ R R R + G C
Sbjct: 57 PAVRGCKREGSP-------GVSAQGGPLEGTPRPAAPGAAPRPRRQRLRRRRAKVGGWGC 109
Query: 70 RGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPK 129
RG + A PG GGR PGGG PG G G R KP+
Sbjct: 110 --ARARGLDRRA-------PGEGGRSPGGGLEPSPGARGAVGAAPAAARHR------KPR 154
Query: 130 TRRPRLRAPRAALLLPRPRTHG--PAGGTRGG 159
R RAP+ L + P G AGG GG
Sbjct: 155 GR--SRRAPQMPLRVLPPILPGLSRAGGATGG 184
Score = 33.5 bits (75), Expect = 0.12
Identities = 40/120 (33%), Positives = 47/120 (39%), Gaps = 22/120 (18%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGGSGV-----LTPRAKGSTSRAE------SSAAR 58
PA GA P + R +R RA GG G L RA G R+ S AR
Sbjct: 83 PAAPGAAPRPRRQRLRRR----RAKVGGWGCARARGLDRRAPGEGGRSPGGGLEPSPGAR 138
Query: 59 GARVRAPG----RTCRGGPGRGYESAAGNSLPSVPG---GGGRDPGGGAASQPGLCGRAG 111
GA AP R RG R + P +PG GG G G + GL GR+G
Sbjct: 139 GAVGAAPAAARHRKPRGRSRRAPQMPLRVLPPILPGLSRAGGATGGRGLPGRRGLPGRSG 198
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 45.4 bits (106), Expect = 3e-05
Identities = 57/172 (33%), Positives = 68/172 (39%), Gaps = 33/172 (19%)
Query: 17 PSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRA--PGRTCRGGP- 73
P P AA + A R G GG G R +G A S RGAR R CR
Sbjct: 79 PRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCA-GSGGRGARSRGCHSPSCCRSSSC 137
Query: 74 ---------GRGYESAAGNSL---------PSVPGG---GGRDPGGGAA--SQPGLCGRA 110
GR E A +L P++P G R G AA +QP LC A
Sbjct: 138 AWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCS-A 196
Query: 111 GTGEKRKWERPGKETWKPKTRRPRLRA---PRAALLLPRPRTHGPAGGTRGG 159
GT + + R T P+ R P LR+ PR + RP AGG RGG
Sbjct: 197 GTAARGRRTRASPPT-PPRPRPPGLRSGDVPRGGARVERPTGRRGAGG-RGG 246
Score = 35.8 bits (81), Expect = 0.024
Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 13/137 (9%)
Query: 20 KPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC--RGGPGRGY 77
+ P A+R S GG P A + RA S + RGA A G RGG G G
Sbjct: 46 RAPLRAKRTVLSSPSLGGG----PAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGG 101
Query: 78 ESAA-GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
G G GGR P C + R + G+E PR
Sbjct: 102 RCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREA------EPRAS 155
Query: 137 APRAALLLPRPRTHGPA 153
+ PRPR PA
Sbjct: 156 PALLICIAPRPRPALPA 172
>gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo
sapiens]
Length = 492
Score = 45.4 bits (106), Expect = 3e-05
Identities = 46/158 (29%), Positives = 59/158 (37%), Gaps = 25/158 (15%)
Query: 10 PAQHGARPSEKPPR---AAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPG 66
PA+ R PPR A G++ G +GV TPR K R +G R+ AP
Sbjct: 287 PARLPTRCLPSPPRSLVAPSESGSAGRRGGTNGVATPREKLGGKRGVGRKGQGTRLGAP- 345
Query: 67 RTCRGGPGRGYESAAGNSLPSVPG-GGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKET 125
+SLP P GR GGG S+ + +R+WE +
Sbjct: 346 ----------------HSLPPPPPFRTGRGEGGGGGSRADVTAGRARPRRRRWEPLRAQR 389
Query: 126 WKPKTRRPRLRAPRAALLLPRPRTHGPAG-GTRGGNLD 162
RP AP L P H AG G GG L+
Sbjct: 390 ---SGARPGAPAPPLPCLPPAAVCHALAGAGAPGGRLE 424
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 45.4 bits (106), Expect = 3e-05
Identities = 57/172 (33%), Positives = 68/172 (39%), Gaps = 33/172 (19%)
Query: 17 PSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRA--PGRTCRGGP- 73
P P AA + A R G GG G R +G A S RGAR R CR
Sbjct: 79 PRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCA-GSGGRGARSRGCHSPSCCRSSSC 137
Query: 74 ---------GRGYESAAGNSL---------PSVPGG---GGRDPGGGAA--SQPGLCGRA 110
GR E A +L P++P G R G AA +QP LC A
Sbjct: 138 AWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCS-A 196
Query: 111 GTGEKRKWERPGKETWKPKTRRPRLRA---PRAALLLPRPRTHGPAGGTRGG 159
GT + + R T P+ R P LR+ PR + RP AGG RGG
Sbjct: 197 GTAARGRRTRASPPT-PPRPRPPGLRSGDVPRGGARVERPTGRRGAGG-RGG 246
Score = 35.8 bits (81), Expect = 0.024
Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 13/137 (9%)
Query: 20 KPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC--RGGPGRGY 77
+ P A+R S GG P A + RA S + RGA A G RGG G G
Sbjct: 46 RAPLRAKRTVLSSPSLGGG----PAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGG 101
Query: 78 ESAA-GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
G G GGR P C + R + G+E PR
Sbjct: 102 RCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREA------EPRAS 155
Query: 137 APRAALLLPRPRTHGPA 153
+ PRPR PA
Sbjct: 156 PALLICIAPRPRPALPA 172
>gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo
sapiens]
Length = 492
Score = 45.4 bits (106), Expect = 3e-05
Identities = 46/158 (29%), Positives = 59/158 (37%), Gaps = 25/158 (15%)
Query: 10 PAQHGARPSEKPPR---AAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPG 66
PA+ R PPR A G++ G +GV TPR K R +G R+ AP
Sbjct: 287 PARLPTRCLPSPPRSLVAPSESGSAGRRGGTNGVATPREKLGGKRGVGRKGQGTRLGAP- 345
Query: 67 RTCRGGPGRGYESAAGNSLPSVPG-GGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKET 125
+SLP P GR GGG S+ + +R+WE +
Sbjct: 346 ----------------HSLPPPPPFRTGRGEGGGGGSRADVTAGRARPRRRRWEPLRAQR 389
Query: 126 WKPKTRRPRLRAPRAALLLPRPRTHGPAG-GTRGGNLD 162
RP AP L P H AG G GG L+
Sbjct: 390 ---SGARPGAPAPPLPCLPPAAVCHALAGAGAPGGRLE 424
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 45.1 bits (105), Expect = 4e-05
Identities = 35/115 (30%), Positives = 45/115 (39%), Gaps = 10/115 (8%)
Query: 12 QHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRG 71
Q A P+ +P A G PR + +R + GA RA G
Sbjct: 202 QETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAG 261
Query: 72 GPGRGYESAAGNSLPSVP-GGGGRDPGG-GAASQP--------GLCGRAGTGEKR 116
PG G+ + P P GGGGR+PG G A+ P GL G A G +R
Sbjct: 262 RPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRR 316
Score = 33.5 bits (75), Expect = 0.12
Identities = 40/138 (28%), Positives = 48/138 (34%), Gaps = 31/138 (22%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
P G +P+ PPR Q S G S P+ + + A ARVR PGR
Sbjct: 174 PVYLGNKPT--PPR----QEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAE 227
Query: 70 RG---------------GPGRGYES------AAGNSLPSVPGG----GGRDPGGGAASQP 104
PG G S AAG P GG R PGGG P
Sbjct: 228 GASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNP 287
Query: 105 GLCGRAGTGEKRKWERPG 122
G GRA + + + G
Sbjct: 288 GALGRAAPPSRARQDAWG 305
Score = 28.5 bits (62), Expect = 3.8
Identities = 32/106 (30%), Positives = 40/106 (37%), Gaps = 14/106 (13%)
Query: 14 GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESS-----AARGARVRAPGRT 68
GA PP A++ +G G+ +G RA SS + G R R R
Sbjct: 288 GALGRAAPPSRARQDAWGLSGCATVGL----RRGDCDRAGSSQPPATSGNGERCRFCRRR 343
Query: 69 CRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGE 114
R G G E P+ P G D GAA RAG+GE
Sbjct: 344 RRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVL-----RAGSGE 384
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 45.1 bits (105), Expect = 4e-05
Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 20/137 (14%)
Query: 9 FPAQHGARPSEKPPRAAQRQGASRAGTGGSGV---LTPRAKGSTS-RAESSAARGARVRA 64
F ++ PP + G GG G ++ ++G S RA+ + R +
Sbjct: 1330 FTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQRAKDLSKRSFSSQR 1389
Query: 65 PG---RTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERP 121
PG + R GPG G ++G+S GGGG PGG G G+KR W P
Sbjct: 1390 PGMERQNRRPGPG-GKAGSSGSS----SGGGGGGPGGRTGP--------GRGDKRSWPSP 1436
Query: 122 GKETWKPKTRRPRLRAP 138
+ P+ R P L P
Sbjct: 1437 KNRSRPPEERPPGLPLP 1453
Score = 27.7 bits (60), Expect = 6.5
Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 11/99 (11%)
Query: 70 RGGPGRGYESAAGNSLP-SVPGGG--------GRDPGGGAASQPGLCGRAGTGEKRKWER 120
R RG E +LP S PG P AA P L + +WE
Sbjct: 1264 RENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDLSNQNSDQANEEWET 1323
Query: 121 PGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGG 159
+ + RR AP LL P+ G GG GG
Sbjct: 1324 ASESSDFTSERRGDKEAPPPVLL--TPKAVGTPGGGGGG 1360
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 44.3 bits (103), Expect = 7e-05
Identities = 56/172 (32%), Positives = 68/172 (39%), Gaps = 33/172 (19%)
Query: 17 PSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRA--PGRTCRGGP- 73
P P AA + A R G GG G R +G A S RGAR R CR
Sbjct: 79 PRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCA-GSGGRGARSRGCHSPSCCRSSSC 137
Query: 74 ---------GRGYESAAGNSL---------PSVPGG---GGRDPGGGAA--SQPGLCGRA 110
GR + A +L P++P G R G AA +QP LC A
Sbjct: 138 AWHRWPQLRGREADPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCS-A 196
Query: 111 GTGEKRKWERPGKETWKPKTRRPRLRA---PRAALLLPRPRTHGPAGGTRGG 159
GT + + R T P+ R P LR+ PR + RP AGG RGG
Sbjct: 197 GTAARGRRTRASPPT-PPRPRPPGLRSGDVPRGGARVERPTGRRGAGG-RGG 246
Score = 35.0 bits (79), Expect = 0.040
Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 13/137 (9%)
Query: 20 KPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC--RGGPGRGY 77
+ P A+R S GG P A + RA S + RGA A G RGG G G
Sbjct: 46 RAPLRAKRTVLSSPSLGGG----PAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGG 101
Query: 78 ESAA-GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
G G GGR P C + R + G+E PR
Sbjct: 102 RCCTRGRGRFPCAGSGGRGARSRGCHSPSCCRSSSCAWHRWPQLRGREA------DPRAS 155
Query: 137 APRAALLLPRPRTHGPA 153
+ PRPR PA
Sbjct: 156 PALLICIAPRPRPALPA 172
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 43.5 bits (101), Expect = 1e-04
Identities = 43/150 (28%), Positives = 57/150 (38%), Gaps = 16/150 (10%)
Query: 2 GCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGS-GVLTPRAKGSTSRAESSAARGA 60
G EV G RP+ +PP R R+G+G + + PR S G+
Sbjct: 66 GTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS--------GS 117
Query: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
R+R GP G SA + P+ P R G AAS G G G + R
Sbjct: 118 RLRPAAP----GPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173
Query: 121 PGKETWKP---KTRRPRLRAPRAALLLPRP 147
P + +P RR R R+A RP
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRP 203
Score = 33.5 bits (75), Expect = 0.12
Identities = 50/197 (25%), Positives = 67/197 (34%), Gaps = 64/197 (32%)
Query: 15 ARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTS--------------------RAES 54
A P+ P+AA R RA +GGSG P ++G S R +
Sbjct: 135 ASPAPAAPQAAARTAPGRAASGGSG---PGSRGQGSDQVGARPSRAGGQPPPLTCRRCRA 191
Query: 55 SAARGAR-VRAPG-------------RTCR-----GGPGRGYESAAGNSLPS-------- 87
+ R AR R PG R+C GGPG S+ S
Sbjct: 192 APRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIII 251
Query: 88 ------VPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERP-------GKETWKPKTRRPR 134
V G GGR G +QPG + +R++ +P G + PR
Sbjct: 252 FGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRYRKPLTLSFGGGVSSPTHPVVAPR 311
Query: 135 LRAPRAALLLPRP-RTH 150
PR+ P RTH
Sbjct: 312 RHFPRSVPRFPAGFRTH 328
>gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo
sapiens]
Length = 209
Score = 43.5 bits (101), Expect = 1e-04
Identities = 43/150 (28%), Positives = 57/150 (38%), Gaps = 16/150 (10%)
Query: 2 GCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGS-GVLTPRAKGSTSRAESSAARGA 60
G EV G RP+ +PP R R+G+G + + PR S G+
Sbjct: 66 GTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS--------GS 117
Query: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
R+R GP G SA + P+ P R G AAS G G G + R
Sbjct: 118 RLRPAAP----GPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173
Query: 121 PGKETWKP---KTRRPRLRAPRAALLLPRP 147
P + +P RR R R+A RP
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRP 203
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 43.5 bits (101), Expect = 1e-04
Identities = 43/150 (28%), Positives = 57/150 (38%), Gaps = 16/150 (10%)
Query: 2 GCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGS-GVLTPRAKGSTSRAESSAARGA 60
G EV G RP+ +PP R R+G+G + + PR S G+
Sbjct: 66 GTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS--------GS 117
Query: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
R+R GP G SA + P+ P R G AAS G G G + R
Sbjct: 118 RLRPAAP----GPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173
Query: 121 PGKETWKP---KTRRPRLRAPRAALLLPRP 147
P + +P RR R R+A RP
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRP 203
Score = 33.5 bits (75), Expect = 0.12
Identities = 50/197 (25%), Positives = 67/197 (34%), Gaps = 64/197 (32%)
Query: 15 ARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTS--------------------RAES 54
A P+ P+AA R RA +GGSG P ++G S R +
Sbjct: 135 ASPAPAAPQAAARTAPGRAASGGSG---PGSRGQGSDQVGARPSRAGGQPPPLTCRRCRA 191
Query: 55 SAARGAR-VRAPG-------------RTCR-----GGPGRGYESAAGNSLPS-------- 87
+ R AR R PG R+C GGPG S+ S
Sbjct: 192 APRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIII 251
Query: 88 ------VPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERP-------GKETWKPKTRRPR 134
V G GGR G +QPG + +R++ +P G + PR
Sbjct: 252 FGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRYRKPLTLSFGGGVSSPTHPVVAPR 311
Query: 135 LRAPRAALLLPRP-RTH 150
PR+ P RTH
Sbjct: 312 RHFPRSVPRFPAGFRTH 328
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 43.5 bits (101), Expect = 1e-04
Identities = 43/150 (28%), Positives = 57/150 (38%), Gaps = 16/150 (10%)
Query: 2 GCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGS-GVLTPRAKGSTSRAESSAARGA 60
G EV G RP+ +PP R R+G+G + + PR S G+
Sbjct: 66 GTEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS--------GS 117
Query: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWER 120
R+R GP G SA + P+ P R G AAS G G G + R
Sbjct: 118 RLRPAAP----GPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173
Query: 121 PGKETWKP---KTRRPRLRAPRAALLLPRP 147
P + +P RR R R+A RP
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRP 203
Score = 33.5 bits (75), Expect = 0.12
Identities = 50/197 (25%), Positives = 67/197 (34%), Gaps = 64/197 (32%)
Query: 15 ARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTS--------------------RAES 54
A P+ P+AA R RA +GGSG P ++G S R +
Sbjct: 135 ASPAPAAPQAAARTAPGRAASGGSG---PGSRGQGSDQVGARPSRAGGQPPPLTCRRCRA 191
Query: 55 SAARGAR-VRAPG-------------RTCR-----GGPGRGYESAAGNSLPS-------- 87
+ R AR R PG R+C GGPG S+ S
Sbjct: 192 APRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIII 251
Query: 88 ------VPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERP-------GKETWKPKTRRPR 134
V G GGR G +QPG + +R++ +P G + PR
Sbjct: 252 FGGALRVRGCGGRRRSNGQGTQPGCRLLSPAPPRRRYRKPLTLSFGGGVSSPTHPVVAPR 311
Query: 135 LRAPRAALLLPRP-RTH 150
PR+ P RTH
Sbjct: 312 RHFPRSVPRFPAGFRTH 328
>gi|57222570 codanin 1 [Homo sapiens]
Length = 1227
Score = 43.1 bits (100), Expect = 1e-04
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 16/115 (13%)
Query: 5 VVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSR------AESSAA- 57
++ F Q + PP A+ GAS A G G ++G+ S+ A+S+AA
Sbjct: 53 LLNFLREQSSRVLPQGPPTPAKTPGASAALPGRPGGPPRGSRGARSQLFPPTEAQSTAAE 112
Query: 58 -----RGARVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRD-PGGGAASQPGL 106
RG R R PG G GRG E G S S+PG GGR G G+ S+P L
Sbjct: 113 APLARRGGRRRGPGPARERG-GRGLEE--GVSGESLPGAGGRRLRGSGSPSRPSL 164
>gi|23510368 homeobox D11 [Homo sapiens]
Length = 338
Score = 42.4 bits (98), Expect = 3e-04
Identities = 32/87 (36%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 70 RGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPK 129
RGG G G SA G S PGGGG GG A A + +E P
Sbjct: 76 RGGGGGG--SAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLPPA 133
Query: 130 TRRPRL--RAPRAALLLPRPRTHGPAG 154
RRP + +AP P P HGPAG
Sbjct: 134 GRRPDVLFKAPEPVCAAPGP-PHGPAG 159
Score = 27.7 bits (60), Expect = 6.5
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 11/66 (16%)
Query: 17 PSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRG 76
P+ P A +G R G GG G +P K + AA G+ GG G G
Sbjct: 199 PAPPQPEGAADKGDPRTGAGGGGG-SPCTKATPGSEPKGAAEGS----------GGDGEG 247
Query: 77 YESAAG 82
AG
Sbjct: 248 PPGEAG 253
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 42.4 bits (98), Expect = 3e-04
Identities = 48/168 (28%), Positives = 55/168 (32%), Gaps = 26/168 (15%)
Query: 1 MGCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESS----- 55
+G ++G P G P P R G R G G R +G E
Sbjct: 662 VGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRGGRGGNEPPPPPPP 721
Query: 56 --AARGARVRAPGRTCRGGPGRGYESAAGNSLPSVPGGG-GRDPGGGAASQPGLCGRAGT 112
ARG R RGGPG G G+ PGGG G G PG G G+
Sbjct: 722 FRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPG--GGMGS 779
Query: 113 GEKRKWERPGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGN 160
G R E PG RP GP GG GG+
Sbjct: 780 GH-RPHEGPGGSMGGGGGHRPH---------------EGPGGGISGGS 811
Score = 33.1 bits (74), Expect = 0.15
Identities = 33/110 (30%), Positives = 38/110 (34%), Gaps = 8/110 (7%)
Query: 14 GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGP 73
G RP E P R G G + GS R G+ G GP
Sbjct: 750 GHRPHEGPGGGMGNSSGHRPHEGPGGGM-----GSGHRPHEGPG-GSMGGGGGHRPHEGP 803
Query: 74 GRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCG-RAGTGEKRKWERPG 122
G G +G+ P GGG GGG G G G+G R E PG
Sbjct: 804 GGGISGGSGHR-PHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPG 852
>gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo
sapiens]
Length = 536
Score = 41.6 bits (96), Expect = 4e-04
Identities = 33/92 (35%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 50 SRAESSAARGARVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGR 109
S E A GA R G+ G G G S G P+ PG G G A S G GR
Sbjct: 37 SFCEPCMAPGA-ARGRGKPALGAHGAGCSSMGGAPPPTDPGRAGLRSWGAAGSARGSEGR 95
Query: 110 AGTGEKRKWERPGKETWKPKTRRPRLRAPRAA 141
+ + R RP +RR R RAPR A
Sbjct: 96 PSSRQARPLRRP--------SRRARRRAPRCA 119
Score = 31.2 bits (69), Expect = 0.58
Identities = 50/185 (27%), Positives = 61/185 (32%), Gaps = 43/185 (23%)
Query: 2 GCEVVGFFPAQHGARPSEKPPRAAQRQ-GASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60
GC +G GA P P RA R GA+ + G G R +R +R A
Sbjct: 62 GCSSMG------GAPPPTDPGRAGLRSWGAAGSARGSEG----RPSSRQARPLRRPSRRA 111
Query: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGG--------------------GA 100
R RAP R P R +A P G G R G
Sbjct: 112 RRRAP----RCAPDRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLDPFTRPRFPLQFFQG 167
Query: 101 ASQPGLCGRAGTGEKRKWERPGKE---TWKPKTRRPRLRAPRAALLLPRPRTH---GPAG 154
QP C G E R+W G + P + P P + LP + H P G
Sbjct: 168 CPQPSRC--LGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLG 225
Query: 155 GTRGG 159
RGG
Sbjct: 226 CCRGG 230
Score = 29.3 bits (64), Expect = 2.2
Identities = 31/119 (26%), Positives = 40/119 (33%), Gaps = 16/119 (13%)
Query: 22 PRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYESAA 81
PR + G G G+ P G S A A + + P CRGG +
Sbjct: 180 PRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPR 239
Query: 82 GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLRAPRA 140
G LP G GRD A G+ R ++ P+ R P AP A
Sbjct: 240 GLCLP----GRGRDRAVEA------------GDAVAQVRVQSHSFAPRPRAPLAVAPAA 282
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 41.2 bits (95), Expect = 6e-04
Identities = 47/150 (31%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
PA+ PS + ++Q +G AG G R + SR+ +SA R R P
Sbjct: 357 PARGKESPSPRSAPSSQGRGGRAAGGAGRR-RRRRRRRRRSRSSASAPRRRGRRRP---- 411
Query: 70 RGGPGRGYESAAGNSLPSVPGGGGR-DPGGGAASQPGLCGRAGTGEKRKWERPGKETWKP 128
R P RG + + S G GR PG G +PG G KR ERP
Sbjct: 412 RPAPPRGSSRSLSRARSSSDSGSGRGAPGPG--PEPGSERGHGGHGKRAKERP------- 462
Query: 129 KTRRPRLRAPRAALLLPRPRTHGPAGGTRG 158
PR R A P P HG GG G
Sbjct: 463 ----PR---ARPASTSPSPGAHGRRGGPEG 485
Score = 39.3 bits (90), Expect = 0.002
Identities = 43/153 (28%), Positives = 58/153 (37%), Gaps = 25/153 (16%)
Query: 25 AQRQGASRAGT--GGSGVLTP-RAKGSTSRAESSAARGARVRAP---------------G 66
+QR SR+ + GGSG +P R GS R+ + R +P
Sbjct: 291 SQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAA 350
Query: 67 RTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETW 126
P RG ES + S PS G GGR GG R +R+
Sbjct: 351 AAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRR------RRRRRRRRRSRSSASAPR 404
Query: 127 KPKTRRPRLRAPR-AALLLPRPRTHGPAGGTRG 158
+ RRPR PR ++ L R R+ +G RG
Sbjct: 405 RRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRG 437
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 40.4 bits (93), Expect = 0.001
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 9/102 (8%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
PA S PP ++ + L+P A + + A ++AA + V G +
Sbjct: 426 PAASSGYESSTPPGLVSPSAEPQSSSN----LSPAAAAAAAAAAAAAAAVSAVHRGGGSG 481
Query: 70 RGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAG 111
GG G G +G+ GGGG GGG S G G AG
Sbjct: 482 SGGAGGGSGGGSGSG-----GGGGGAGGGGGGSSGGGSGTAG 518
Score = 31.6 bits (70), Expect = 0.45
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 13/104 (12%)
Query: 19 EKPPRAAQRQGASRAGTGGS---GVLTPRAKGSTSR------AESSAARGARVRAPGRTC 69
E P+ ++ A+ +G S G+++P A+ +S A ++AA A A
Sbjct: 416 ESSPQGSESSPAASSGYESSTPPGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVH 475
Query: 70 RGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTG 113
RGG G G A G S G G GGGA G G+G
Sbjct: 476 RGG-GSGSGGAGGGS---GGGSGSGGGGGGAGGGGGGSSGGGSG 515
>gi|145309320 forkhead box Q1 [Homo sapiens]
Length = 403
Score = 40.0 bits (92), Expect = 0.001
Identities = 42/139 (30%), Positives = 53/139 (38%), Gaps = 13/139 (9%)
Query: 22 PRAAQ--RQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYES 79
PRAA +QG+ G GGS +P + S A A G R G G +S
Sbjct: 8 PRAAHGDKQGSDLEGAGGSDAPSPLSAAGDDSLGSDGDCAANSPAAGGGARDTQGDGEQS 67
Query: 80 AAGNSLPSVPGGGGRDPGGGAA---SQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
A G PG P AA ++ G AG G G + KP TRRP +
Sbjct: 68 AGGG-----PGAEEAIPAAAAAAVVAEGAEAGAAGPGAGGAGSGEGARS-KPYTRRP--K 119
Query: 137 APRAALLLPRPRTHGPAGG 155
P + + L AGG
Sbjct: 120 PPYSYIALIAMAIRDSAGG 138
>gi|239508745 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 40.0 bits (92), Expect = 0.001
Identities = 37/113 (32%), Positives = 45/113 (39%), Gaps = 7/113 (6%)
Query: 2 GCEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSG----VLTPRAKGSTSRAESSAA 57
G ++ FP+ S A + Q G G V PR GS A+ +AA
Sbjct: 85 GFLLIALFPSSQNRHRSAGRGLAGRLQQVRPGAAGPRGRLPWVTGPRPAGSLPAAQFAAA 144
Query: 58 RGARVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRA 110
GA RA R R GR AAG P GG G G AS G+ G+A
Sbjct: 145 SGA-ARAGRRRERACAGRSAGDAAGPEAPQPTGGRGCSRGSATAS--GVGGKA 194
Score = 27.3 bits (59), Expect = 8.4
Identities = 39/160 (24%), Positives = 56/160 (35%), Gaps = 21/160 (13%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
P QHG P P A + + ++A + P ++ A R PG
Sbjct: 3 PGQHGVAP----PPAGRERLQNKAWSPAPAPARP----PLNQPPGGKALSTRALQPGGAL 54
Query: 70 RGGP--GR-GYESAAGNSLPSVPGGGGRDPG-------GGAASQPGLCGRAGTGEKRKWE 119
G GR G+ PS P G G + ++ GR G ++
Sbjct: 55 EAGTRGGREGHRRLRQPPTPSAPPGSPLHEGFLLIALFPSSQNRHRSAGRGLAGRLQQ-V 113
Query: 120 RPGKETWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGG 159
RPG P+ R P + PR A LP + +G R G
Sbjct: 114 RPGAAG--PRGRLPWVTGPRPAGSLPAAQFAAASGAARAG 151
>gi|221219048 transducin-like enhancer protein 2 isoform 2 [Homo
sapiens]
Length = 706
Score = 40.0 bits (92), Expect = 0.001
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGG-SGVLTPRAKGSTSRAESSA---ARGARV-RA 64
P H A P PR A G S G SG L +A+ + + E A A G+RV RA
Sbjct: 142 PLSHHAPPVPLTPRPAGLVGGSATGLLALSGALAAQAQLAAAVKEDRAGVEAEGSRVERA 201
Query: 65 PGRTCRGGPGRGYESAAGNSLPSVPGGGGR 94
P R+ P ES PS PGGGG+
Sbjct: 202 PSRSASPSPP---ESLVEEERPSGPGGGGK 228
>gi|21361151 transducin-like enhancer protein 2 isoform 1 [Homo
sapiens]
Length = 743
Score = 40.0 bits (92), Expect = 0.001
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGG-SGVLTPRAKGSTSRAESSA---ARGARV-RA 64
P H A P PR A G S G SG L +A+ + + E A A G+RV RA
Sbjct: 128 PLSHHAPPVPLTPRPAGLVGGSATGLLALSGALAAQAQLAAAVKEDRAGVEAEGSRVERA 187
Query: 65 PGRTCRGGPGRGYESAAGNSLPSVPGGGGR 94
P R+ P ES PS PGGGG+
Sbjct: 188 PSRSASPSPP---ESLVEEERPSGPGGGGK 214
>gi|84570137 homeobox B3 [Homo sapiens]
Length = 431
Score = 40.0 bits (92), Expect = 0.001
Identities = 35/117 (29%), Positives = 42/117 (35%), Gaps = 19/117 (16%)
Query: 3 CEVVGFFPAQHGARPSEKPPRAAQRQGASRAGTGGSGVLT--PRAKGSTSRA-------- 52
C G P A P PP AA S + GG + P+ T+
Sbjct: 73 CMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPGTNSTLTKQIFPW 132
Query: 53 --ESSAARGARVRAPGRT--CRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPG 105
ES + +PG C GG G G +G S GGGG GGG S PG
Sbjct: 133 MKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGS-----GGGGGGGGGGDKSPPG 184
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.0 bits (92), Expect = 0.001
Identities = 44/170 (25%), Positives = 66/170 (38%), Gaps = 14/170 (8%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
PA+ G S P A+R+ SR T A+ SR+ + A R +R R+P R
Sbjct: 578 PARRGRSRSRTP---ARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVR-- 632
Query: 70 RGGPGRGYESAAGNSLPSVPGGGGRDPGG-----GAASQPGLCGRAGTGEKRKWERPGKE 124
R R +G S P GR G + R+G R R G+
Sbjct: 633 RRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRS 692
Query: 125 TWKPKTRRPRLRAPRAALLLPRPRTHGPAGGTRGGNLDTDTQKEHCVTTE 174
++R PR R+ L+ R R+H RG + + +K T++
Sbjct: 693 ----RSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQ 738
Score = 33.5 bits (75), Expect = 0.12
Identities = 39/150 (26%), Positives = 53/150 (35%), Gaps = 13/150 (8%)
Query: 16 RPSEKPPRAAQRQGASR------------AGTGGSGVLTPRAKGSTSRAESSAARGARVR 63
RP R QR+G SR A G S TP +G SR+ + A R +R R
Sbjct: 539 RPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRG-RSRSRTPARRRSRSR 597
Query: 64 APGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGK 123
P R + + P+ R P + R+G R R G+
Sbjct: 598 TPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGR 657
Query: 124 ETWKPKTRRPRLRAPRAALLLPRPRTHGPA 153
+ RR R R+ A R R+ PA
Sbjct: 658 SRSRTPARRGRSRSRTPARRSGRSRSRTPA 687
Score = 33.5 bits (75), Expect = 0.12
Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 15/137 (10%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGT----GGSGVLTPRAKGSTSRAESSAARGARVRAP 65
PA+ R + P R+G SR+ T G S TP + SR+ + A RG R+
Sbjct: 640 PARRSGRSRSRTPA---RRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRG---RSR 693
Query: 66 GRTCRGGPGRGYESA-AGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKE 124
RT R G R G S P GR G++S+ R R P +
Sbjct: 694 SRTPRRGRSRSRSLVRRGRSHSRTPQRRGR---SGSSSERKNKSRTSQRRSRSNSSPEMK 750
Query: 125 TWKPKTRRPR-LRAPRA 140
+ +RR R L +PR+
Sbjct: 751 KSRISSRRSRSLSSPRS 767
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 39.7 bits (91), Expect = 0.002
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 20/121 (16%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPR----------AKGSTSRAESSAARG 59
P G ++ PP G+ GG G + P A+G A ++ A G
Sbjct: 371 PGPQGHAGAQGPPGPPGINGSP----GGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPG 426
Query: 60 ARVRA--PGRT-CRGGPG-RGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEK 115
R A PG+ +G PG RG AG +P VPG G D G+ +PG G G +
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAG--IPGVPGAKGEDGKDGSPGEPGANGLPGAAGE 484
Query: 116 R 116
R
Sbjct: 485 R 485
Score = 35.8 bits (81), Expect = 0.024
Identities = 45/147 (30%), Positives = 54/147 (36%), Gaps = 14/147 (9%)
Query: 14 GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGP 73
G + PP QG GTGG P G GA G+ G P
Sbjct: 627 GDKGDTGPPGPQGLQGLP--GTGGP----PGENGKPGEPGPKGDAGAPGAPGGKGDAGAP 680
Query: 74 G-RGYESAAGNSLPSVPGGGGR---DPGGGAASQPGLCGRAGTG--EKRKWERPGKETWK 127
G RG AG P + GG G + G GAA PG G AGT + ER G +
Sbjct: 681 GERGPPGLAG--APGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPG 738
Query: 128 PKTRRPRLRAPRAALLLPRPRTHGPAG 154
PK + P A + + GP G
Sbjct: 739 PKGDKGEPGGPGADGVPGKDGPRGPTG 765
Score = 35.4 bits (80), Expect = 0.031
Identities = 40/145 (27%), Positives = 45/145 (31%), Gaps = 21/145 (14%)
Query: 17 PSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRG 76
P K A + R G GG G P K + + PG T GG
Sbjct: 581 PGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGP---------PGPTGPGGDKGD 631
Query: 77 YESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLR 136
L +PG GG G +PG G AG PG K P R
Sbjct: 632 TGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGA--------PGAPGGKGDAGAPGER 683
Query: 137 APRAALLLPRPRTHGPAG--GTRGG 159
P L P G AG G GG
Sbjct: 684 GPPG--LAGAPGLRGGAGPPGPEGG 706
Score = 33.9 bits (76), Expect = 0.090
Identities = 32/95 (33%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Query: 22 PRAAQRQGAS--RAGTGGSGVLTPRAKGSTSRAESSAARGARVRA--PGRT-CRGGPGRG 76
P AA +GA R G +G+ P KG + G R A PGR GGPG
Sbjct: 479 PGAAGERGAPGFRGPAGPNGI--PGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGM- 535
Query: 77 YESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAG 111
+P PGG G D G G GR G
Sbjct: 536 ------RGMPGSPGGPGSDGKPGPPGSQGESGRPG 564
Score = 33.1 bits (74), Expect = 0.15
Identities = 34/111 (30%), Positives = 40/111 (36%), Gaps = 13/111 (11%)
Query: 14 GARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGP 73
GA PP AA G G+ +P KG A G PG+ GP
Sbjct: 708 GAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGV----PGKDGPRGP 763
Query: 74 GRGYESAAGNSLPSVPGGGGRDPG-GGAASQPGLCG-RAGTGEKRKWERPG 122
G P P G D G GGA PG+ G R GE+ + PG
Sbjct: 764 -------TGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPG 807
Score = 31.2 bits (69), Expect = 0.58
Identities = 34/102 (33%), Positives = 38/102 (37%), Gaps = 14/102 (13%)
Query: 17 PSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRG 76
P PR + + G +G P A G RGA PG GGP G
Sbjct: 788 PGIAGPRGSPGERGETGPPGPAGF--PGAPGQNGEPGGKGERGA----PGEKGEGGP-PG 840
Query: 77 YESAAGNSLPSVPGG-----GGR-DPGG-GAASQPGLCGRAG 111
G S P+ P G G R PGG GAA PG G G
Sbjct: 841 VAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPG 882
Score = 31.2 bits (69), Expect = 0.58
Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 14/104 (13%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGGS-GVLTPRAKGSTSRAESSAARGARVRAPGRT 68
P Q+G +P +R G GG GV P G + A +G + R
Sbjct: 815 PGQNG-----EPGGKGERGAPGEKGEGGPPGVAGP--PGGSGPAGPPGPQGVKGE---RG 864
Query: 69 CRGGPGR-GYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAG 111
GGPG G+ A G LP PG G G + PG G G
Sbjct: 865 SPGGPGAAGFPGARG--LPGPPGSNGNPGPPGPSGSPGKDGPPG 906
Score = 28.9 bits (63), Expect = 2.9
Identities = 31/105 (29%), Positives = 36/105 (34%), Gaps = 19/105 (18%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVR--APGR 67
PA P K R + + TG G+ KG + A G APG
Sbjct: 253 PAGIPGFPGMKGHRGFDGRNGEKGETGAPGL-----KGENGLPGENGAPGPMGPRGAPGE 307
Query: 68 TCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGT 112
RG PG LP G G D G+ QPG G GT
Sbjct: 308 --RGRPG----------LPGAAGARGNDGARGSDGQPGPPGPPGT 340
Score = 27.3 bits (59), Expect = 8.4
Identities = 31/104 (29%), Positives = 35/104 (33%), Gaps = 5/104 (4%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPR-AKGSTSRAESSAARGARVRAPGRT 68
P GA PP G S G SG P A G + +G R
Sbjct: 1040 PGAPGAPGHPGPPGPVGPAGKS-GDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETG 1098
Query: 69 CRGGPG-RGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAG 111
RG G +G+ GN P PG G GA PG G G
Sbjct: 1099 ERGAAGIKGHRGFPGN--PGAPGSPGPAGQQGAIGSPGPAGPRG 1140
>gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo
sapiens]
Length = 316
Score = 39.7 bits (91), Expect = 0.002
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Query: 16 RPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGR 75
R KP R Q+ A+ A + G G PR + A + A G + R R PGR
Sbjct: 171 RRGRKPRRRGQKSTAAGAKSRGEGGKKPRQQ---KPAAAGAKSGLGDKKSRRWGRKKPGR 227
Query: 76 -GYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKE 124
G E+ AG + GGGG+ P AA PG ++ +R+W++ E
Sbjct: 228 WGQEAVAGETC----GGGGKKPQKAAA--PG--AKSHKKPRRQWQKAAAE 269
Score = 33.9 bits (76), Expect = 0.090
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 22 PRAAQRQGASRAGTG--GSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGR--GY 77
PR Q ASR+G+ S T G R + AA GA+ R + RG R G
Sbjct: 122 PRHCISQDASRSGSRVCRSRPQTRGGGGKKPRRQKDAAAGAKSRGGKKPRRGRKPRRRGQ 181
Query: 78 ESAAGNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETW 126
+S A + G GG+ P + G G + R+W R W
Sbjct: 182 KSTAAGAKSR--GEGGKKPRQQKPAAAGAKSGLGDKKSRRWGRKKPGRW 228
Score = 32.3 bits (72), Expect = 0.26
Identities = 36/141 (25%), Positives = 50/141 (35%), Gaps = 23/141 (16%)
Query: 10 PAQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTC 69
P H R + AA Q S G G G P + T R+ R C
Sbjct: 80 PLSHRGRAQRRSMHAAAAQERS-LGRGCLGKEPPNRESWTRSDPRHCISQDASRSGSRVC 138
Query: 70 RGGPGRGYESAAGNSLPSVPGGGGRDP------GGGAASQPGLCGRAGTGEKRKWER--- 120
R S P GGGG+ P GA S+ G R G +R+ ++
Sbjct: 139 R-------------SRPQTRGGGGKKPRRQKDAAAGAKSRGGKKPRRGRKPRRRGQKSTA 185
Query: 121 PGKETWKPKTRRPRLRAPRAA 141
G ++ ++PR + P AA
Sbjct: 186 AGAKSRGEGGKKPRQQKPAAA 206
Score = 28.9 bits (63), Expect = 2.9
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 11 AQHGARPSEKPPRAAQRQGASRAGTGGSGVLTPRA-KGSTSRAESSAARGARVRAPGRTC 69
A GA+ +KP R Q+ A + G+ R K + +RA+S G + R G+
Sbjct: 249 AAPGAKSHKKPRRQWQKAAAEKVAVAGAESCGGRGQKAAAARAKSGGFGGKKQRRRGQRA 308
Query: 70 ---RGGPG 74
RGG G
Sbjct: 309 PKSRGGRG 316
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.132 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,573,482
Number of Sequences: 37866
Number of extensions: 678111
Number of successful extensions: 6414
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 809
Number of HSP's that attempted gapping in prelim test: 4139
Number of HSP's gapped (non-prelim): 2479
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.