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Search of human proteins with 169167105
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169167105 PREDICTED: hypothetical protein [Homo sapiens]
(131 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169167105 PREDICTED: hypothetical protein [Homo sapiens] 271 1e-73
gi|169166257 PREDICTED: hypothetical protein [Homo sapiens] 212 6e-56
gi|169167103 PREDICTED: hypothetical protein [Homo sapiens] 210 3e-55
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 36 0.008
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 35 0.013
gi|33946327 nucleoporin 214kDa [Homo sapiens] 33 0.064
gi|156616290 collagen type VI alpha 6 [Homo sapiens] 31 0.32
gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ... 31 0.32
gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ... 31 0.32
gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo ... 31 0.32
gi|169166217 PREDICTED: hypothetical protein [Homo sapiens] 30 0.54
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 30 0.70
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 30 0.70
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 30 0.70
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 30 0.70
gi|33457316 pleckstrin homology domain containing, family O memb... 30 0.70
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 30 0.70
gi|221136876 Ras association (RalGDS/AF-6) domain family (N-term... 29 0.92
gi|221136872 Ras association (RalGDS/AF-6) domain family (N-term... 29 0.92
gi|4502483 Ras association (RalGDS/AF-6) domain family (N-termin... 29 0.92
gi|21541824 transducin-like enhancer protein 1 [Homo sapiens] 29 0.92
gi|94557295 mitogen-activated protein kinase 8 interacting prote... 29 0.92
gi|94557297 mitogen-activated protein kinase 8 interacting prote... 29 0.92
gi|221219026 pleckstrin homology-like domain, family B, member 1... 29 1.2
gi|221219024 pleckstrin homology-like domain, family B, member 1... 29 1.2
gi|38424073 pleckstrin homology-like domain, family B, member 1 ... 29 1.2
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 29 1.2
gi|6912492 mitogen-activated protein kinase 8 interacting protei... 29 1.2
gi|7706537 mitogen-activated protein kinase 8 interacting protei... 29 1.2
gi|222537714 taxilin beta [Homo sapiens] 28 1.6
>gi|169167105 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 271 bits (692), Expect = 1e-73
Identities = 131/131 (100%), Positives = 131/131 (100%)
Query: 1 MCSWGTSVPRLVTRAPARTRLCLSLPVSPEAASGCRSPRALEMKAGPCSTQEGGRQWTHG 60
MCSWGTSVPRLVTRAPARTRLCLSLPVSPEAASGCRSPRALEMKAGPCSTQEGGRQWTHG
Sbjct: 1 MCSWGTSVPRLVTRAPARTRLCLSLPVSPEAASGCRSPRALEMKAGPCSTQEGGRQWTHG 60
Query: 61 SVPLQTTARLAALGIFPCPGETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSP 120
SVPLQTTARLAALGIFPCPGETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSP
Sbjct: 61 SVPLQTTARLAALGIFPCPGETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSP 120
Query: 121 GTEAGDRSRRS 131
GTEAGDRSRRS
Sbjct: 121 GTEAGDRSRRS 131
>gi|169166257 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 212 bits (540), Expect = 6e-56
Identities = 103/109 (94%), Positives = 105/109 (96%)
Query: 23 LSLPVSPEAASGCRSPRALEMKAGPCSTQEGGRQWTHGSVPLQTTARLAALGIFPCPGET 82
LSLP+SPEAASGCRSPRALEMKAGPCSTQEGGRQW HGSVPLQTTARLAALGIFPCPGET
Sbjct: 77 LSLPMSPEAASGCRSPRALEMKAGPCSTQEGGRQWAHGSVPLQTTARLAALGIFPCPGET 136
Query: 83 LSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSPGTEAGDRSRRS 131
LSASLH + IPDQPVGAIIGSQEVSAQ SQHPEGPPSPGTEAGDRSRRS
Sbjct: 137 LSASLHCNPIPDQPVGAIIGSQEVSAQPSQHPEGPPSPGTEAGDRSRRS 185
>gi|169167103 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 210 bits (534), Expect = 3e-55
Identities = 102/109 (93%), Positives = 104/109 (95%)
Query: 23 LSLPVSPEAASGCRSPRALEMKAGPCSTQEGGRQWTHGSVPLQTTARLAALGIFPCPGET 82
LSLP+SPEAASGCRSPRALEMKAGPCSTQEGGRQW HGSVPLQTTARLAALGIFPCPGET
Sbjct: 77 LSLPMSPEAASGCRSPRALEMKAGPCSTQEGGRQWAHGSVPLQTTARLAALGIFPCPGET 136
Query: 83 LSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSPGTEAGDRSRRS 131
LSASLH + IPDQPVGAIIGSQE SAQ SQHPEGPPSPGTEAGDRSRRS
Sbjct: 137 LSASLHCNPIPDQPVGAIIGSQEESAQPSQHPEGPPSPGTEAGDRSRRS 185
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 36.2 bits (82), Expect = 0.008
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 31 AASGCRSPRALEMKAG-PCSTQEGGRQWTHGSVPLQTTARLAALGIFPCPGETLSASLHS 89
AA+ R PR + ++ P + Q+ + +HG+ P TA + L + PG +A
Sbjct: 1150 AATRSRIPRPIGLRMPMPVAAQQPASR-SHGAAPALDTAITSRLQLQTPPGSATAA---- 1204
Query: 90 DLIPDQPVGAIIGSQEVSAQTSQHPEGPPSPGTEAGDRSRRS 131
DL P QP G +G AQ P P SP A + R+
Sbjct: 1205 DLRPKQPPGRGLGPGR--AQAGARPPAPRSPRLPASTSAARN 1244
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 35.4 bits (80), Expect = 0.013
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 13/110 (11%)
Query: 26 PVSPE--AASGCRSPRALEMKAGPCSTQEGGRQWTHG-----SVPLQTTARLAALGIF-- 76
P SPE A +G + RAL A T+E G P +T +R A +
Sbjct: 109 PESPEPAAVAGVETSRALAAGADSPKTEEARPSPAPGPGTPTGTPTRTPSRTAPGALTAK 168
Query: 77 ----PCPGETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSPGT 122
P PG T+++ + + Q G + SA Q PE P PGT
Sbjct: 169 PPLAPKPGTTVASGVTARSASGQVTGGHGAAAATSASAGQAPEDPSGPGT 218
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 33.1 bits (74), Expect = 0.064
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 5/114 (4%)
Query: 6 TSVPRLVTRAPARTRLCLSLPVSPEAASGCRSPRALEMKAGPCSTQEGGRQWTHGSVPLQ 65
TSV + + T + SLPV+ +SG S + AG S G +Q T+ +VP
Sbjct: 1395 TSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQ-TNSTVPPS 1453
Query: 66 TTARLAALGIFPCPGETLS--ASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGP 117
A P TLS + L S P P+ A G A +S PE P
Sbjct: 1454 APPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSA--GRSTEEATSSALPEKP 1505
>gi|156616290 collagen type VI alpha 6 [Homo sapiens]
Length = 2263
Score = 30.8 bits (68), Expect = 0.32
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 93 PDQPVGAIIGSQEVSAQTSQHPEGPPSPGTEAGDRSR 129
P P G E S+ P+GPP PG EAG++ R
Sbjct: 1583 PQGPRGEAGVKGEKGGVGSKGPQGPPGPGGEAGNQGR 1619
>gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 30.8 bits (68), Expect = 0.32
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Query: 2 CSWGTSVPRLVTRAPARTRLCLSLPVSPEA--------ASGCRSPRALEMKAGPCS 49
C+W +S P + A LC S ++P +GCR P L GPC+
Sbjct: 25 CAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLKSQETGCRDPLQLPGLLGPCA 80
>gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 30.8 bits (68), Expect = 0.32
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Query: 2 CSWGTSVPRLVTRAPARTRLCLSLPVSPEA--------ASGCRSPRALEMKAGPCS 49
C+W +S P + A LC S ++P +GCR P L GPC+
Sbjct: 25 CAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLKSQETGCRDPLQLPGLLGPCA 80
>gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 30.8 bits (68), Expect = 0.32
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Query: 2 CSWGTSVPRLVTRAPARTRLCLSLPVSPEA--------ASGCRSPRALEMKAGPCS 49
C+W +S P + A LC S ++P +GCR P L GPC+
Sbjct: 25 CAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLKSQETGCRDPLQLPGLLGPCA 80
>gi|169166217 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 30.0 bits (66), Expect = 0.54
Identities = 34/126 (26%), Positives = 46/126 (36%), Gaps = 12/126 (9%)
Query: 3 SWGTSVPRLVTRAPARTRLCLSLPV----SPEAASGCRSPRALEMKAGPCSTQEGGRQWT 58
SWG P L RA C S P S E S R + +++G ST+ RQ +
Sbjct: 26 SWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASRPSPFVLLQSGRLSTKRPERQAS 85
Query: 59 -------HGSVPLQT-TARLAALGIFPCPGETLSASLHSDLIPDQPVGAIIGSQEVSAQT 110
GS Q A A P PG ++L +P P G G + +
Sbjct: 86 LLPRPAPRGSTGAQVWWAGPGAAAAPPPPGVRQCSALAGSSVPWFPGGGGGGGSGSARRA 145
Query: 111 SQHPEG 116
+ P G
Sbjct: 146 LRKPSG 151
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 29.6 bits (65), Expect = 0.70
Identities = 30/105 (28%), Positives = 35/105 (33%), Gaps = 13/105 (12%)
Query: 26 PVSPEAASGCRSPRALEMKAGPC-----STQEGGRQWTHGSVPLQTTARLAALGIFPCPG 80
P P A S R R P + Q+ G Q G VP T L P G
Sbjct: 426 PAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQ--PGGVPSAPTGPLGP----PGHG 479
Query: 81 ETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSPGTEAG 125
+TL + P P +I HP GPP GT G
Sbjct: 480 QTLGQQVPG--FPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQG 522
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 29.6 bits (65), Expect = 0.70
Identities = 30/105 (28%), Positives = 35/105 (33%), Gaps = 13/105 (12%)
Query: 26 PVSPEAASGCRSPRALEMKAGPC-----STQEGGRQWTHGSVPLQTTARLAALGIFPCPG 80
P P A S R R P + Q+ G Q G VP T L P G
Sbjct: 426 PAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQ--PGGVPSAPTGPLGP----PGHG 479
Query: 81 ETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSPGTEAG 125
+TL + P P +I HP GPP GT G
Sbjct: 480 QTLGQQVPG--FPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQG 522
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 29.6 bits (65), Expect = 0.70
Identities = 30/105 (28%), Positives = 35/105 (33%), Gaps = 13/105 (12%)
Query: 26 PVSPEAASGCRSPRALEMKAGPC-----STQEGGRQWTHGSVPLQTTARLAALGIFPCPG 80
P P A S R R P + Q+ G Q G VP T L P G
Sbjct: 426 PAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQ--PGGVPSAPTGPLGP----PGHG 479
Query: 81 ETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSPGTEAG 125
+TL + P P +I HP GPP GT G
Sbjct: 480 QTLGQQVPG--FPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQG 522
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 29.6 bits (65), Expect = 0.70
Identities = 30/105 (28%), Positives = 35/105 (33%), Gaps = 13/105 (12%)
Query: 26 PVSPEAASGCRSPRALEMKAGPC-----STQEGGRQWTHGSVPLQTTARLAALGIFPCPG 80
P P A S R R P + Q+ G Q G VP T L P G
Sbjct: 432 PAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQ--PGGVPSAPTGPLGP----PGHG 485
Query: 81 ETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSPGTEAG 125
+TL + P P +I HP GPP GT G
Sbjct: 486 QTLGQQVPG--FPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQG 528
>gi|33457316 pleckstrin homology domain containing, family O member
2 [Homo sapiens]
Length = 490
Score = 29.6 bits (65), Expect = 0.70
Identities = 27/108 (25%), Positives = 37/108 (34%), Gaps = 14/108 (12%)
Query: 28 SPEAASGCRSPRALEMKAGPCSTQEGGRQ-------------WTHGSVPLQTTARLAALG 74
+P +AS SP + E P G Q W + S A A
Sbjct: 232 TPVSASSEVSPESQEDSETPAEEDSGSEQPPNSVLPDKLKVSWENPSPQEAPAAESAEPS 291
Query: 75 IFPCPGETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSPGT 122
PC ET A+ P P I+ + ++ GPP+PGT
Sbjct: 292 QAPC-SETSEAAPREGGKPPTPPPKILSEKLKASMGEMQASGPPAPGT 338
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 29.6 bits (65), Expect = 0.70
Identities = 34/114 (29%), Positives = 44/114 (38%), Gaps = 18/114 (15%)
Query: 15 APARTRLCLSLPV-----SPEAASGCRSPRALEMKAG---PCSTQEGGRQWTHGSVPLQT 66
AP+ T+ L PV SP + AL G P T G G P QT
Sbjct: 1656 APSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQT 1715
Query: 67 TARLAALGIFPCPGETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSP 120
+ A + P P +TLS L P P+G +Q +S + P P SP
Sbjct: 1716 LSLTPASSLVPTPAQTLS------LAPGPPLGP---TQTLSLAPAP-PLAPASP 1759
>gi|221136876 Ras association (RalGDS/AF-6) domain family
(N-terminal) member 7 isoform 3 [Homo sapiens]
Length = 320
Score = 29.3 bits (64), Expect = 0.92
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 16 PARTRLCLSLPVSPEAASGCRSPRALEMKAGPCSTQEG 53
P R + SLPV P AA GC + L + P ++ G
Sbjct: 103 PERCLIRASLPVKPRAALGCEPRKTLTPEPAPSLSRPG 140
>gi|221136872 Ras association (RalGDS/AF-6) domain family
(N-terminal) member 7 isoform 2 [Homo sapiens]
Length = 337
Score = 29.3 bits (64), Expect = 0.92
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 16 PARTRLCLSLPVSPEAASGCRSPRALEMKAGPCSTQEG 53
P R + SLPV P AA GC + L + P ++ G
Sbjct: 103 PERCLIRASLPVKPRAALGCEPRKTLTPEPAPSLSRPG 140
>gi|4502483 Ras association (RalGDS/AF-6) domain family (N-terminal)
member 7 isoform 1 [Homo sapiens]
Length = 373
Score = 29.3 bits (64), Expect = 0.92
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 16 PARTRLCLSLPVSPEAASGCRSPRALEMKAGPCSTQEG 53
P R + SLPV P AA GC + L + P ++ G
Sbjct: 103 PERCLIRASLPVKPRAALGCEPRKTLTPEPAPSLSRPG 140
>gi|21541824 transducin-like enhancer protein 1 [Homo sapiens]
Length = 770
Score = 29.3 bits (64), Expect = 0.92
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 97 VGAIIGSQEVSAQTSQHPEGPPSPGT 122
+ AIIG Q++ AQ H GPP P T
Sbjct: 119 LNAIIGQQQLQAQHLSHGHGPPVPLT 144
>gi|94557295 mitogen-activated protein kinase 8 interacting protein
3 isoform 2 [Homo sapiens]
Length = 1330
Score = 29.3 bits (64), Expect = 0.92
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 51 QEGGRQWTHGSVPLQTTARLAALGIFPCPGETLSASLHSDLIP 93
Q GG T S+P + R +L +FP T+ A + L+P
Sbjct: 186 QVGGNSQTESSLPGRRKERPTSLNVFPLADGTVRAQIGGKLVP 228
>gi|94557297 mitogen-activated protein kinase 8 interacting protein
3 isoform 1 [Homo sapiens]
Length = 1336
Score = 29.3 bits (64), Expect = 0.92
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 51 QEGGRQWTHGSVPLQTTARLAALGIFPCPGETLSASLHSDLIP 93
Q GG T S+P + R +L +FP T+ A + L+P
Sbjct: 186 QVGGNSQTESSLPGRRKERPTSLNVFPLADGTVRAQIGGKLVP 228
>gi|221219026 pleckstrin homology-like domain, family B, member 1
isoform b [Homo sapiens]
Length = 1319
Score = 28.9 bits (63), Expect = 1.2
Identities = 35/113 (30%), Positives = 42/113 (37%), Gaps = 27/113 (23%)
Query: 20 RLCLSLPVSP---------EAASGCRSPRALEMKAGPCSTQEGGRQWTHGSVPLQTTARL 70
R LS P SP E S SP + +G C++ Q SVP AR
Sbjct: 230 RYLLSPPTSPGAMSVGSSYENTSPAFSPLSSPASSGSCASHSPSGQEPGPSVPPLVPAR- 288
Query: 71 AALGIFPCPGETLSASLHSDLIPDQ--PVGAIIGSQEVSAQTSQHPEGPPSPG 121
S+S H L P Q P GA S +S + E PPSPG
Sbjct: 289 -------------SSSYHLALQPPQSRPSGARSESPRLSRKGGH--ERPPSPG 326
>gi|221219024 pleckstrin homology-like domain, family B, member 1
isoform a [Homo sapiens]
Length = 1377
Score = 28.9 bits (63), Expect = 1.2
Identities = 35/113 (30%), Positives = 42/113 (37%), Gaps = 27/113 (23%)
Query: 20 RLCLSLPVSP---------EAASGCRSPRALEMKAGPCSTQEGGRQWTHGSVPLQTTARL 70
R LS P SP E S SP + +G C++ Q SVP AR
Sbjct: 230 RYLLSPPTSPGAMSVGSSYENTSPAFSPLSSPASSGSCASHSPSGQEPGPSVPPLVPAR- 288
Query: 71 AALGIFPCPGETLSASLHSDLIPDQ--PVGAIIGSQEVSAQTSQHPEGPPSPG 121
S+S H L P Q P GA S +S + E PPSPG
Sbjct: 289 -------------SSSYHLALQPPQSRPSGARSESPRLSRKGGH--ERPPSPG 326
>gi|38424073 pleckstrin homology-like domain, family B, member 1
isoform a [Homo sapiens]
Length = 1377
Score = 28.9 bits (63), Expect = 1.2
Identities = 35/113 (30%), Positives = 42/113 (37%), Gaps = 27/113 (23%)
Query: 20 RLCLSLPVSP---------EAASGCRSPRALEMKAGPCSTQEGGRQWTHGSVPLQTTARL 70
R LS P SP E S SP + +G C++ Q SVP AR
Sbjct: 230 RYLLSPPTSPGAMSVGSSYENTSPAFSPLSSPASSGSCASHSPSGQEPGPSVPPLVPAR- 288
Query: 71 AALGIFPCPGETLSASLHSDLIPDQ--PVGAIIGSQEVSAQTSQHPEGPPSPG 121
S+S H L P Q P GA S +S + E PPSPG
Sbjct: 289 -------------SSSYHLALQPPQSRPSGARSESPRLSRKGGH--ERPPSPG 326
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 28.9 bits (63), Expect = 1.2
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 14 RAPARTRLCLSLPVSPEAASGCRSPRALEMK-AGPCSTQEGGRQWTHGSVPLQTTARLAA 72
RAP T L +++P +P G R L ++ A P S+ E Q T + L + +++
Sbjct: 1115 RAPGATSLPVAIP-APRRNRG----RGLGVEDATPSSSSENYVQET--PLVLSRCSSVSS 1167
Query: 73 LGIF------------PCPGETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPP 118
LG F PC G+ S ++ +PD P + S+ + + P+GPP
Sbjct: 1168 LGSFESPSIASSIPSEPCSGQG-SGTISPSELPDSPGQTMPPSRSKTPPLAPAPQGPP 1224
>gi|6912492 mitogen-activated protein kinase 8 interacting protein 2
isoform 1 [Homo sapiens]
Length = 824
Score = 28.9 bits (63), Expect = 1.2
Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 22/115 (19%)
Query: 9 PRLVTRAPARTRLCLSLPVSPEAASGCRSPRALEMKAGPCSTQEGGRQWTHGSVPLQTTA 68
PR R PA LPV P+ + S ++ P +++ W ++ +
Sbjct: 310 PREPPRRPA------FLPVGPDDTN---SEYESGSESEPDLSEDADSPWLLSNL----VS 356
Query: 69 RLAALGIFP--CPGETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSPG 121
R+ + G P CPG+ LS + P P G +AQ SQ PE PG
Sbjct: 357 RMISEGSSPIRCPGQCLSPAPRPPGEPVSPAGG-------AAQDSQDPEAAAGPG 404
>gi|7706537 mitogen-activated protein kinase 8 interacting protein 2
isoform 2 [Homo sapiens]
Length = 797
Score = 28.9 bits (63), Expect = 1.2
Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 22/115 (19%)
Query: 9 PRLVTRAPARTRLCLSLPVSPEAASGCRSPRALEMKAGPCSTQEGGRQWTHGSVPLQTTA 68
PR R PA LPV P+ + S ++ P +++ W ++ +
Sbjct: 283 PREPPRRPA------FLPVGPDDTN---SEYESGSESEPDLSEDADSPWLLSNL----VS 329
Query: 69 RLAALGIFP--CPGETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSPG 121
R+ + G P CPG+ LS + P P G +AQ SQ PE PG
Sbjct: 330 RMISEGSSPIRCPGQCLSPAPRPPGEPVSPAGG-------AAQDSQDPEAAAGPG 377
>gi|222537714 taxilin beta [Homo sapiens]
Length = 684
Score = 28.5 bits (62), Expect = 1.6
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 63 PLQTTARLAALGIFPCPGETLSASLHSDLIPDQPVGAIIGSQEVSAQTSQHPEGPPSPGT 122
P+Q + A+ + P E L+ L D+I A +E SA+ S+ PE SP
Sbjct: 41 PVQPPEKEAS--VHPDISEELNRQLE-DIINTYGSAASTAGKEGSARASEQPENAESPDN 97
Query: 123 EAGD 126
E GD
Sbjct: 98 EDGD 101
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,328,384
Number of Sequences: 37866
Number of extensions: 309396
Number of successful extensions: 1122
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 1078
Number of HSP's gapped (non-prelim): 99
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.