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Search of human proteins with 169167074
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169167074 PREDICTED: similar to SET translocation [Homo
sapiens]
(309 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169167074 PREDICTED: similar to SET translocation [Homo sapiens] 634 0.0
gi|169166810 PREDICTED: similar to SET translocation [Homo sapiens] 634 0.0
gi|169166302 PREDICTED: similar to SET translocation [Homo sapiens] 598 e-171
gi|170763500 SET translocation (myeloid leukemia-associated) iso... 491 e-139
gi|239752832 PREDICTED: similar to SET translocation [Homo sapiens] 487 e-138
gi|239747380 PREDICTED: similar to SET translocation [Homo sapiens] 487 e-138
gi|239741205 PREDICTED: similar to SET translocation [Homo sapiens] 487 e-138
gi|170763498 SET translocation (myeloid leukemia-associated) iso... 442 e-124
gi|49410495 TSPY-like 5 [Homo sapiens] 145 3e-35
gi|11545835 TSPY-like 2 [Homo sapiens] 141 6e-34
gi|62988322 TSPY-like 1 [Homo sapiens] 140 1e-33
gi|46094051 TSPY-like 4 [Homo sapiens] 138 7e-33
gi|146198777 TSPY-like 6 [Homo sapiens] 129 3e-30
gi|239747008 PREDICTED: hypothetical protein XP_002344239 [Homo ... 126 2e-29
gi|239746992 PREDICTED: similar to testis specific protein, Y-li... 126 2e-29
gi|118918417 testis specific protein, Y-linked 2 [Homo sapiens] 126 2e-29
gi|239746996 PREDICTED: similar to Testis-specific Y-encoded pro... 126 3e-29
gi|239747006 PREDICTED: similar to testis specific protein, Y-li... 125 4e-29
gi|118026929 testis specific protein, Y-linked 3 [Homo sapiens] 125 4e-29
gi|139948460 testis specific protein, Y-linked 1 [Homo sapiens] 124 1e-28
gi|21327708 nucleosome assembly protein 1-like 1 [Homo sapiens] 72 6e-13
gi|4758756 nucleosome assembly protein 1-like 1 [Homo sapiens] 72 6e-13
gi|5174613 nucleosome assembly protein 1-like 4 [Homo sapiens] 64 2e-10
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 53 4e-07
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 53 4e-07
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 53 4e-07
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 52 5e-07
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 51 1e-06
gi|17975763 myelin transcription factor 1 [Homo sapiens] 50 3e-06
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 50 3e-06
>gi|169167074 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 309
Score = 634 bits (1636), Expect = 0.0
Identities = 309/309 (100%), Positives = 309/309 (100%)
Query: 1 MSVLQHRIWPQRARRLVVWFLGFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLP 60
MSVLQHRIWPQRARRLVVWFLGFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLP
Sbjct: 1 MSVLQHRIWPQRARRLVVWFLGFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLP 60
Query: 61 KKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNL 120
KKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNL
Sbjct: 61 KKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNL 120
Query: 121 GVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSK 180
GVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSK
Sbjct: 121 GVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSK 180
Query: 181 EFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGA 240
EFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGA
Sbjct: 181 EFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGA 240
Query: 241 DDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGE 300
DDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGE
Sbjct: 241 DDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGE 300
Query: 301 EGEKDERDD 309
EGEKDERDD
Sbjct: 301 EGEKDERDD 309
>gi|169166810 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 309
Score = 634 bits (1636), Expect = 0.0
Identities = 309/309 (100%), Positives = 309/309 (100%)
Query: 1 MSVLQHRIWPQRARRLVVWFLGFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLP 60
MSVLQHRIWPQRARRLVVWFLGFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLP
Sbjct: 1 MSVLQHRIWPQRARRLVVWFLGFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLP 60
Query: 61 KKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNL 120
KKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNL
Sbjct: 61 KKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNL 120
Query: 121 GVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSK 180
GVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSK
Sbjct: 121 GVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSK 180
Query: 181 EFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGA 240
EFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGA
Sbjct: 181 EFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGA 240
Query: 241 DDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGE 300
DDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGE
Sbjct: 241 DDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGE 300
Query: 301 EGEKDERDD 309
EGEKDERDD
Sbjct: 301 EGEKDERDD 309
>gi|169166302 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 296
Score = 598 bits (1541), Expect = e-171
Identities = 296/309 (95%), Positives = 296/309 (95%), Gaps = 13/309 (4%)
Query: 1 MSVLQHRIWPQRARRLVVWFLGFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLP 60
MSVLQHRIWPQ SSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLP
Sbjct: 1 MSVLQHRIWPQ-------------SSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLP 47
Query: 61 KKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNL 120
KKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNL
Sbjct: 48 KKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNL 107
Query: 121 GVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSK 180
GVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSK
Sbjct: 108 GVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSK 167
Query: 181 EFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGA 240
EFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGA
Sbjct: 168 EFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGA 227
Query: 241 DDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGE 300
DDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGE
Sbjct: 228 DDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGE 287
Query: 301 EGEKDERDD 309
EGEKDERDD
Sbjct: 288 EGEKDERDD 296
>gi|170763500 SET translocation (myeloid leukemia-associated)
isoform 1 [Homo sapiens]
Length = 290
Score = 491 bits (1264), Expect = e-139
Identities = 245/289 (84%), Positives = 260/289 (89%), Gaps = 6/289 (2%)
Query: 27 LAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLPKKGEKEQQEAIEHIDEIQNEIDRLNE 86
+APK QS L +KK PRPPP L PEETSAS GLPKKGEKEQQEAIEHIDE+QNEIDRLNE
Sbjct: 1 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE 60
Query: 87 QDNEEILKVEQKYNKLRQPFFQKRSELISKILNLGVTTFGNHLQVSALLGKENEETLHYL 146
Q +EEILKVEQKYNKLRQPFFQKRSELI+KI N VTTF NH QVSALLG+E+EE LHYL
Sbjct: 61 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL 120
Query: 147 TRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVT 206
TRVEVTEFEDIKSGYR+DFYFDENPYFENKVLSKEFHLNESG+PSSKSTEIKWKSGKD+T
Sbjct: 121 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT 180
Query: 207 KRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGADDLGEDIKDDIWPNPLQYYLVPHMDD 266
KR SQ QNKASRKRQHE PESF TWFTDHSDAGAD+LGE IKDDIWPNPLQYYLVP MDD
Sbjct: 181 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD 240
Query: 267 EEGE----DDNEEEEEGLEDTDEEGDEDEGE--EDDDEGEEGEKDERDD 309
EEGE DD++EEEEGLED DEEGDEDEGE EDDDEGEEGE+DE +D
Sbjct: 241 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGED 289
>gi|239752832 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 487 bits (1254), Expect = e-138
Identities = 245/302 (81%), Positives = 264/302 (87%), Gaps = 10/302 (3%)
Query: 17 VVWFLGFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLPKKGEKEQQEAIEHIDE 76
+VWFL FP+S+APK QS L +KK PRPPP L EETSAS GLPKKGEKEQQEAIEHIDE
Sbjct: 1 MVWFLDFPNSMAPKRQSPLPLQKKKPRPPPALGLEETSASAGLPKKGEKEQQEAIEHIDE 60
Query: 77 IQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNLGVTTFGNHLQVSALLG 136
+QNEIDRLNEQD+EEILKVEQKYNKLRQPFFQKRSELI+KI N GVTTF NH QVS+LLG
Sbjct: 61 VQNEIDRLNEQDSEEILKVEQKYNKLRQPFFQKRSELIAKIPNFGVTTFVNHPQVSSLLG 120
Query: 137 KENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSKEFHLNESGNPSSKSTE 196
+E+EE LHYLT+VEVTEFEDIKSGYR+DFYFDENPYFENKV SKEFHLNESG+PSSKST+
Sbjct: 121 EEDEEALHYLTKVEVTEFEDIKSGYRIDFYFDENPYFENKVFSKEFHLNESGDPSSKSTK 180
Query: 197 IKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGADDLGEDIKDDIWPNPL 256
IKWKSGKDVTKR SQ QNKASRKRQHE PESF TWFTDHSDAGAD+L E IKDDIWPNPL
Sbjct: 181 IKWKSGKDVTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELEEVIKDDIWPNPL 240
Query: 257 QYYLVPHMDDEEG-------EDDNEEEEEGLEDTDEEGDEDEGE--EDDDEGEEGEKDER 307
QYYLVP MDDEEG +DD +E EE LED D EGDEDEGE EDDDEGEEGE+DE
Sbjct: 241 QYYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDID-EGDEDEGEEDEDDDEGEEGEEDEG 299
Query: 308 DD 309
+D
Sbjct: 300 ED 301
>gi|239747380 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 487 bits (1254), Expect = e-138
Identities = 245/302 (81%), Positives = 264/302 (87%), Gaps = 10/302 (3%)
Query: 17 VVWFLGFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLPKKGEKEQQEAIEHIDE 76
+VWFL FP+S+APK QS L +KK PRPPP L EETSAS GLPKKGEKEQQEAIEHIDE
Sbjct: 1 MVWFLDFPNSMAPKRQSPLPLQKKKPRPPPALGLEETSASAGLPKKGEKEQQEAIEHIDE 60
Query: 77 IQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNLGVTTFGNHLQVSALLG 136
+QNEIDRLNEQD+EEILKVEQKYNKLRQPFFQKRSELI+KI N GVTTF NH QVS+LLG
Sbjct: 61 VQNEIDRLNEQDSEEILKVEQKYNKLRQPFFQKRSELIAKIPNFGVTTFVNHPQVSSLLG 120
Query: 137 KENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSKEFHLNESGNPSSKSTE 196
+E+EE LHYLT+VEVTEFEDIKSGYR+DFYFDENPYFENKV SKEFHLNESG+PSSKST+
Sbjct: 121 EEDEEALHYLTKVEVTEFEDIKSGYRIDFYFDENPYFENKVFSKEFHLNESGDPSSKSTK 180
Query: 197 IKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGADDLGEDIKDDIWPNPL 256
IKWKSGKDVTKR SQ QNKASRKRQHE PESF TWFTDHSDAGAD+L E IKDDIWPNPL
Sbjct: 181 IKWKSGKDVTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELEEVIKDDIWPNPL 240
Query: 257 QYYLVPHMDDEEG-------EDDNEEEEEGLEDTDEEGDEDEGE--EDDDEGEEGEKDER 307
QYYLVP MDDEEG +DD +E EE LED D EGDEDEGE EDDDEGEEGE+DE
Sbjct: 241 QYYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDID-EGDEDEGEEDEDDDEGEEGEEDEG 299
Query: 308 DD 309
+D
Sbjct: 300 ED 301
>gi|239741205 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 487 bits (1254), Expect = e-138
Identities = 245/302 (81%), Positives = 264/302 (87%), Gaps = 10/302 (3%)
Query: 17 VVWFLGFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLPKKGEKEQQEAIEHIDE 76
+VWFL FP+S+APK QS L +KK PRPPP L EETSAS GLPKKGEKEQQEAIEHIDE
Sbjct: 1 MVWFLDFPNSMAPKRQSPLPLQKKKPRPPPALGLEETSASAGLPKKGEKEQQEAIEHIDE 60
Query: 77 IQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNLGVTTFGNHLQVSALLG 136
+QNEIDRLNEQD+EEILKVEQKYNKLRQPFFQKRSELI+KI N GVTTF NH QVS+LLG
Sbjct: 61 VQNEIDRLNEQDSEEILKVEQKYNKLRQPFFQKRSELIAKIPNFGVTTFVNHPQVSSLLG 120
Query: 137 KENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSKEFHLNESGNPSSKSTE 196
+E+EE LHYLT+VEVTEFEDIKSGYR+DFYFDENPYFENKV SKEFHLNESG+PSSKST+
Sbjct: 121 EEDEEALHYLTKVEVTEFEDIKSGYRIDFYFDENPYFENKVFSKEFHLNESGDPSSKSTK 180
Query: 197 IKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGADDLGEDIKDDIWPNPL 256
IKWKSGKDVTKR SQ QNKASRKRQHE PESF TWFTDHSDAGAD+L E IKDDIWPNPL
Sbjct: 181 IKWKSGKDVTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELEEVIKDDIWPNPL 240
Query: 257 QYYLVPHMDDEEG-------EDDNEEEEEGLEDTDEEGDEDEGE--EDDDEGEEGEKDER 307
QYYLVP MDDEEG +DD +E EE LED D EGDEDEGE EDDDEGEEGE+DE
Sbjct: 241 QYYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDID-EGDEDEGEEDEDDDEGEEGEEDEG 299
Query: 308 DD 309
+D
Sbjct: 300 ED 301
>gi|170763498 SET translocation (myeloid leukemia-associated)
isoform 2 [Homo sapiens]
Length = 277
Score = 442 bits (1136), Expect = e-124
Identities = 222/269 (82%), Positives = 237/269 (88%), Gaps = 6/269 (2%)
Query: 47 VLRPEETSASVGLPKKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPF 106
V + E S G + EKEQQEAIEHIDE+QNEIDRLNEQ +EEILKVEQKYNKLRQPF
Sbjct: 8 VSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPF 67
Query: 107 FQKRSELISKILNLGVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFY 166
FQKRSELI+KI N VTTF NH QVSALLG+E+EE LHYLTRVEVTEFEDIKSGYR+DFY
Sbjct: 68 FQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFY 127
Query: 167 FDENPYFENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPE 226
FDENPYFENKVLSKEFHLNESG+PSSKSTEIKWKSGKD+TKR SQ QNKASRKRQHE PE
Sbjct: 128 FDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPE 187
Query: 227 SFLTWFTDHSDAGADDLGEDIKDDIWPNPLQYYLVPHMDDEEGE----DDNEEEEEGLED 282
SF TWFTDHSDAGAD+LGE IKDDIWPNPLQYYLVP MDDEEGE DD++EEEEGLED
Sbjct: 188 SFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEGEGEEDDDDDEEEEGLED 247
Query: 283 TDEEGDEDEGE--EDDDEGEEGEKDERDD 309
DEEGDEDEGE EDDDEGEEGE+DE +D
Sbjct: 248 IDEEGDEDEGEEDEDDDEGEEGEEDEGED 276
>gi|49410495 TSPY-like 5 [Homo sapiens]
Length = 417
Score = 145 bits (367), Expect = 3e-35
Identities = 81/236 (34%), Positives = 132/236 (55%), Gaps = 20/236 (8%)
Query: 51 EETSASVGLPKKGEKEQ-------QEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLR 103
E TS S G KK E++ + +++ ++ +Q +++ +N Q + L++ +K+ +LR
Sbjct: 175 ENTSVSAGEEKKEERDAGSGPPATEGSMDTLENVQLKLENMNAQADRAYLRLSRKFGQLR 234
Query: 104 QPFFQKRSELISKILNLGVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRV 163
++R+ LI I F NH Q+++ L + +E L YL +EV E + GY++
Sbjct: 235 LQHLERRNHLIQNIPGFWGQAFQNHPQLASFLNSQEKEVLSYLNSLEVEELGLARLGYKI 294
Query: 164 DFYFDENPYFENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHE 223
FYFD NPYF+NKVL KE+ SG S+ST I+W G D+ + LSQ + +R
Sbjct: 295 KFYFDRNPYFQNKVLIKEYGCGPSGQVVSRSTPIQWLPGHDL-QSLSQGNPENNR----- 348
Query: 224 APESFLTWFTDHSDAGADDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEG 279
SF WF++HS +D + E I +++WPNPLQ+YL+ E + +E+EG
Sbjct: 349 ---SFFGWFSNHSSIESDKIVEIINEELWPNPLQFYLL----SEGARVEKGKEKEG 397
>gi|11545835 TSPY-like 2 [Homo sapiens]
Length = 693
Score = 141 bits (356), Expect = 6e-34
Identities = 67/200 (33%), Positives = 117/200 (58%), Gaps = 9/200 (4%)
Query: 61 KKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNL 120
++ + + ++ +++IQ +++ +N + + L++++K+ ++R+PF ++R +I I
Sbjct: 206 ERNAERMESILQALEDIQLDLEAVNIKAGKAFLRLKRKFIQMRRPFLERRDLIIQHIPGF 265
Query: 121 GVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSK 180
V F NH ++S L+ + +E+ YLT ++V + I GY++ YF NPYF N V+ K
Sbjct: 266 WVKAFLNHPRISILINRRDEDIFRYLTNLQVQDLRHISMGYKMKLYFQTNPYFTNMVIVK 325
Query: 181 EFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGA 240
EF N SG S ST I+W G+ + +A R +A SF +WF++HS A
Sbjct: 326 EFQRNRSGRLVSHSTPIRWHRGQ---------EPQARRHGNQDASHSFFSWFSNHSLPEA 376
Query: 241 DDLGEDIKDDIWPNPLQYYL 260
D + E IK+D+W NPL+YYL
Sbjct: 377 DRIAEIIKNDLWVNPLRYYL 396
Score = 43.9 bits (102), Expect = 2e-04
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 263 HMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEKDERDD 309
H ++++ D + E +E +D D +G+E + E DD+G EG+ + DD
Sbjct: 552 HGNNQDSSDSDNEADEASDDEDNDGNEGDNEGSDDDGNEGDNEGSDD 598
Score = 36.2 bits (82), Expect = 0.038
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 266 DEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEKDERD 308
D E ++ +++E+ + D EG +D+G E D+EG + D+RD
Sbjct: 562 DNEADEASDDEDNDGNEGDNEGSDDDGNEGDNEG--SDDDDRD 602
Score = 36.2 bits (82), Expect = 0.038
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 266 DEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEK 304
D+E D NE + EG +D EGD + ++DD + E EK
Sbjct: 570 DDEDNDGNEGDNEGSDDDGNEGDNEGSDDDDRDIEYYEK 608
Score = 30.4 bits (67), Expect = 2.1
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 210 SQMQNKASRKRQHEAPESFLTWFTDHSDA---GADDLG-----EDIKDDIWPNPLQYYLV 261
S N+ S +EA E+ D ++ G+DD G E DD ++YY
Sbjct: 551 SHGNNQDSSDSDNEADEASDDEDNDGNEGDNEGSDDDGNEGDNEGSDDD--DRDIEYYEK 608
Query: 262 PHMDDEEGEDDNEEEEEGLED--TDEEGDEDEGEEDDDEGEEGEKDE 306
D ++ + D E+ E + D +EEG E+ ++D+D EEG +E
Sbjct: 609 VIEDFDKDQADYEDVIEIISDESVEEEGIEEGIQQDEDIYEEGNYEE 655
Score = 28.5 bits (62), Expect = 7.9
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 230 TWFTDHSDAGADDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLE-DTDEEGD 288
T + + +D D+ E+I D P+ + D+ E DD+E + D + E
Sbjct: 459 TDYFETTDNEITDINENICDSENPDHNEVPNNETTDNNESADDHETTDNNESADDNNENP 518
Query: 289 EDEGEEDDDEGEEGEKDE 306
ED + DD E +E
Sbjct: 519 EDNNKNTDDNEENPNNNE 536
Score = 28.5 bits (62), Expect = 7.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 266 DEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDD 297
DE+ ++ EEEG ED EEG++ + + +D
Sbjct: 644 DEDIYEEGNYEEEGSEDVWEEGEDSDDSDLED 675
>gi|62988322 TSPY-like 1 [Homo sapiens]
Length = 437
Score = 140 bits (354), Expect = 1e-33
Identities = 68/191 (35%), Positives = 113/191 (59%), Gaps = 9/191 (4%)
Query: 71 IEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNLGVTTFGNHLQ 130
++ ++ IQ E+D +N Q + ++E K+ ++R+ + ++R+ +I I +T F NH Q
Sbjct: 229 MDPLEAIQLELDTVNAQADRAFQQLEHKFGRMRRHYLERRNYIIQNIPGFWMTAFRNHPQ 288
Query: 131 VSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSKEFHLNESGNP 190
+SA++ ++ E L Y+T +EV E ++G + F+F NPYF NK++ KE+ + SG
Sbjct: 289 LSAMIRGQDAEMLRYITNLEVKELRHPRTGCKFKFFFRRNPYFRNKLIVKEYEVRSSGRV 348
Query: 191 SSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGADDLGEDIKDD 250
S ST I W+ G + + +R + SF TWF+DHS +D + E IK+D
Sbjct: 349 VSLSTPIIWRRGHEPQSFI---------RRNQDLICSFFTWFSDHSLPESDKIAEIIKED 399
Query: 251 IWPNPLQYYLV 261
+WPNPLQYYL+
Sbjct: 400 LWPNPLQYYLL 410
>gi|46094051 TSPY-like 4 [Homo sapiens]
Length = 414
Score = 138 bits (347), Expect = 7e-33
Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 24/257 (9%)
Query: 22 GFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLPKKGEKEQQEA----------- 70
G S + P ++ ++ KK V + E A++ K +KE++ A
Sbjct: 138 GLGSQMIPGKKAKEVTTKKRAISAAVEKEGEAGAAMEEKKVVQKEKKVAGGVKEETRPRA 197
Query: 71 ------IEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNLGVTT 124
++ ++ I E+ +N Q + L++E+K+ ++R+ Q+RS +I I VT
Sbjct: 198 PKINNCMDSLEAIDQELSNVNAQADRAFLQLERKFGRMRRLHMQRRSFIIQNIPGFWVTA 257
Query: 125 FGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSKEFHL 184
F NH Q+S ++ ++E+ L Y+ +EV E + ++G + F F NPYF N+ L KE+
Sbjct: 258 FRNHPQLSPMISGQDEDMLRYMINLEVEELKHPRAGCKFKFIFQGNPYFRNEGLVKEYER 317
Query: 185 NESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGADDLG 244
SG S ST I+W G+D Q R R+ SF WF+DHS D +
Sbjct: 318 RSSGRVVSLSTPIRWHRGQD-------PQAHIHRNREGNTIPSFFNWFSDHSLLEFDRIA 370
Query: 245 EDIKDDIWPNPLQYYLV 261
E IK ++WPNPLQYYL+
Sbjct: 371 EIIKGELWPNPLQYYLM 387
>gi|146198777 TSPY-like 6 [Homo sapiens]
Length = 410
Score = 129 bits (324), Expect = 3e-30
Identities = 64/188 (34%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 74 IDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILNLGVTTFGNHLQVSA 133
++ IQ E+D +N + + +L+VE+++ ++ + + ++R+++I I VT F +H Q+SA
Sbjct: 205 LESIQLELDSVNAEADRALLQVERRFGQIHEYYLEQRNDIIRNIPGFWVTAFRHHPQLSA 264
Query: 134 LLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYFENKVLSKEFHLNESGNPSSK 193
++ ++ E L YLT +EV E ++G + F+F NPYF NK++ K + + G S
Sbjct: 265 MIRGQDAEMLSYLTNLEVKELRHPRTGCKFKFFFQRNPYFRNKLIVKVYEVRSFGQVVSF 324
Query: 194 STEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGADDLGEDIKDDIWP 253
ST I W+ G + R SF TWF+DHS +D + + IK+D+W
Sbjct: 325 STLIMWRRGHGPQSFI---------HRNRHVICSFFTWFSDHSLPESDRIAQIIKEDLWS 375
Query: 254 NPLQYYLV 261
NPLQYYL+
Sbjct: 376 NPLQYYLL 383
>gi|239747008 PREDICTED: hypothetical protein XP_002344239 [Homo
sapiens]
Length = 308
Score = 126 bits (317), Expect = 2e-29
Identities = 69/228 (30%), Positives = 119/228 (52%), Gaps = 11/228 (4%)
Query: 49 RPEETSASVGLPKKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQ 108
R E A +P G + A+E + +Q E++ +N Q + + +K + R+P
Sbjct: 87 REEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLD 146
Query: 109 KRSELISKILNLGVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFD 168
+R +I + NH Q+SAL+ E+E+ L Y+ +EV E + ++ +F
Sbjct: 147 RRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFR 206
Query: 169 ENPYFENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESF 228
NPYF+NKV++KE+ +N + +S ST I+W +V +A R+R H + +F
Sbjct: 207 SNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEV---------EAYRRRHHNSSLNF 257
Query: 229 LTWFTDHSDAGADDLGEDIKDDIWPNPLQYY--LVPHMDDEEGEDDNE 274
WF+DH+ AG++ + E + D+W NPLQYY + P + E D++
Sbjct: 258 FNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQ 305
>gi|239746992 PREDICTED: similar to testis specific protein,
Y-linked 1 [Homo sapiens]
Length = 314
Score = 126 bits (317), Expect = 2e-29
Identities = 69/228 (30%), Positives = 119/228 (52%), Gaps = 11/228 (4%)
Query: 49 RPEETSASVGLPKKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQ 108
R E A +P G + A+E + +Q E++ +N Q + + +K + R+P
Sbjct: 93 REEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLD 152
Query: 109 KRSELISKILNLGVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFD 168
+R +I + NH Q+SAL+ E+E+ L Y+ +EV E + ++ +F
Sbjct: 153 RRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFR 212
Query: 169 ENPYFENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESF 228
NPYF+NKV++KE+ +N + +S ST I+W +V +A R+R H + +F
Sbjct: 213 SNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEV---------EAYRRRHHNSSLNF 263
Query: 229 LTWFTDHSDAGADDLGEDIKDDIWPNPLQYY--LVPHMDDEEGEDDNE 274
WF+DH+ AG++ + E + D+W NPLQYY + P + E D++
Sbjct: 264 FNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQ 311
>gi|118918417 testis specific protein, Y-linked 2 [Homo sapiens]
Length = 308
Score = 126 bits (317), Expect = 2e-29
Identities = 69/228 (30%), Positives = 119/228 (52%), Gaps = 11/228 (4%)
Query: 49 RPEETSASVGLPKKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQ 108
R E A +P G + A+E + +Q E++ +N Q + + +K + R+P
Sbjct: 87 REEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLD 146
Query: 109 KRSELISKILNLGVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFD 168
+R +I + NH Q+SAL+ E+E+ L Y+ +EV E + ++ +F
Sbjct: 147 RRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHRVHLCKIMLFFR 206
Query: 169 ENPYFENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESF 228
NPYF+NKV++KE+ +N + +S ST I+W +V +A R+R H + +F
Sbjct: 207 SNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEV---------EAYRRRHHNSSLNF 257
Query: 229 LTWFTDHSDAGADDLGEDIKDDIWPNPLQYY--LVPHMDDEEGEDDNE 274
WF+DH+ AG++ + E + D+W NPLQYY + P + E D++
Sbjct: 258 FNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQ 305
>gi|239746996 PREDICTED: similar to Testis-specific Y-encoded
protein 1 [Homo sapiens]
Length = 308
Score = 126 bits (316), Expect = 3e-29
Identities = 69/228 (30%), Positives = 119/228 (52%), Gaps = 11/228 (4%)
Query: 49 RPEETSASVGLPKKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQ 108
R E A +P G + A+E + +Q E++ +N Q + + +K + R+P
Sbjct: 87 REEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLD 146
Query: 109 KRSELISKILNLGVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFD 168
+R +I + NH Q+SAL+ E+E+ L Y+ +EV E + ++ +F
Sbjct: 147 RRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFR 206
Query: 169 ENPYFENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESF 228
NPYF+NKV++KE+ +N + +S ST I+W +V +A R+R H + +F
Sbjct: 207 SNPYFQNKVITKEYLVNITEYRASHSTPIEWYLDYEV---------EAYRRRHHNSSLNF 257
Query: 229 LTWFTDHSDAGADDLGEDIKDDIWPNPLQYY--LVPHMDDEEGEDDNE 274
WF+DH+ AG++ + E + D+W NPLQYY + P + E D++
Sbjct: 258 FNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQ 305
>gi|239747006 PREDICTED: similar to testis specific protein,
Y-linked 3 [Homo sapiens]
Length = 314
Score = 125 bits (315), Expect = 4e-29
Identities = 69/228 (30%), Positives = 119/228 (52%), Gaps = 11/228 (4%)
Query: 49 RPEETSASVGLPKKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQ 108
R E A +P G + A+E + +Q E++ +N Q + + +K + R+P
Sbjct: 93 REEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPQLD 152
Query: 109 KRSELISKILNLGVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFD 168
+R +I + NH Q+SAL+ E+E+ L Y+ +EV E + ++ +F
Sbjct: 153 RRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFR 212
Query: 169 ENPYFENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESF 228
NPYF+NKV++KE+ +N + +S ST I+W +V +A R+R H + +F
Sbjct: 213 SNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEV---------EAYRRRHHNSSLNF 263
Query: 229 LTWFTDHSDAGADDLGEDIKDDIWPNPLQYY--LVPHMDDEEGEDDNE 274
WF+DH+ AG++ + E + D+W NPLQYY + P + E D++
Sbjct: 264 FNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQ 311
>gi|118026929 testis specific protein, Y-linked 3 [Homo sapiens]
Length = 308
Score = 125 bits (315), Expect = 4e-29
Identities = 69/228 (30%), Positives = 119/228 (52%), Gaps = 11/228 (4%)
Query: 49 RPEETSASVGLPKKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQ 108
R E A +P G + A+E + +Q E++ +N Q + + +K + R+P
Sbjct: 87 REEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPQLD 146
Query: 109 KRSELISKILNLGVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFD 168
+R +I + NH Q+SAL+ E+E+ L Y+ +EV E + ++ +F
Sbjct: 147 RRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFR 206
Query: 169 ENPYFENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESF 228
NPYF+NKV++KE+ +N + +S ST I+W +V +A R+R H + +F
Sbjct: 207 SNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEV---------EAYRRRHHNSSLNF 257
Query: 229 LTWFTDHSDAGADDLGEDIKDDIWPNPLQYY--LVPHMDDEEGEDDNE 274
WF+DH+ AG++ + E + D+W NPLQYY + P + E D++
Sbjct: 258 FNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQ 305
>gi|139948460 testis specific protein, Y-linked 1 [Homo sapiens]
Length = 308
Score = 124 bits (311), Expect = 1e-28
Identities = 69/228 (30%), Positives = 118/228 (51%), Gaps = 11/228 (4%)
Query: 49 RPEETSASVGLPKKGEKEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQ 108
R E A +P G + A E + +Q E++ +N Q + + +K + R+P
Sbjct: 87 REEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLD 146
Query: 109 KRSELISKILNLGVTTFGNHLQVSALLGKENEETLHYLTRVEVTEFEDIKSGYRVDFYFD 168
+R +I + NH Q+SAL+ E+E+ L Y+ +EV E + ++ +F
Sbjct: 147 RRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFR 206
Query: 169 ENPYFENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESF 228
NPYF+NKV++KE+ +N + +S ST I+W +V +A R+R H + +F
Sbjct: 207 SNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEV---------EAYRRRHHNSSLNF 257
Query: 229 LTWFTDHSDAGADDLGEDIKDDIWPNPLQYY--LVPHMDDEEGEDDNE 274
WF+DH+ AG++ + E + D+W NPLQYY + P + E D++
Sbjct: 258 FNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQ 305
>gi|21327708 nucleosome assembly protein 1-like 1 [Homo sapiens]
Length = 391
Score = 72.0 bits (175), Expect = 6e-13
Identities = 84/372 (22%), Positives = 154/372 (41%), Gaps = 99/372 (26%)
Query: 12 RARRLVVWFLGFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLPKKGEKEQQEAI 71
+AR+L V + P LA Q L +TP T LP+ ++ +
Sbjct: 34 KARQLTVQMMQNPQILAA-LQERLDGLVETP----------TGYIESLPRVVKRR----V 78
Query: 72 EHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILN------------ 119
+ +Q + ++ + EE+ +E+KY L QP F KR E+I+ I
Sbjct: 79 NALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDE 138
Query: 120 -------------------------------LGVTTFGNHLQVSALLGKENEETLHYLTR 148
+T F N +S ++ + +E L +L
Sbjct: 139 EDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKD 198
Query: 149 VEVTEFEDIKS--GYRVDFYFDENPYFENKVLSKEFHLNESGNPSSKST----------- 195
++V +F D + ++F+F+ N YF N+VL+K + + + S +
Sbjct: 199 IKV-KFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTG 257
Query: 196 -EIKWKSGKDVTKRLSQMQNKASRK------RQHEAPESFLTWFTDHSDAGADDLGED-- 246
+I WK GK+VT + + + K + + + +SF +F + DL +D
Sbjct: 258 CQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAE 317
Query: 247 ------------IKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEE 294
+++ I P + Y+ ++D DD++ +EEG E+ DEEG+E EG+E
Sbjct: 318 AILAADFEIGHFLRERIIPRSVLYFTGEAIED----DDDDYDEEG-EEADEEGEE-EGDE 371
Query: 295 DDDEGEEGEKDE 306
++D + +KD+
Sbjct: 372 ENDPDYDPKKDQ 383
>gi|4758756 nucleosome assembly protein 1-like 1 [Homo sapiens]
Length = 391
Score = 72.0 bits (175), Expect = 6e-13
Identities = 84/372 (22%), Positives = 154/372 (41%), Gaps = 99/372 (26%)
Query: 12 RARRLVVWFLGFPSSLAPKCQSSLLSRKKTPRPPPVLRPEETSASVGLPKKGEKEQQEAI 71
+AR+L V + P LA Q L +TP T LP+ ++ +
Sbjct: 34 KARQLTVQMMQNPQILAA-LQERLDGLVETP----------TGYIESLPRVVKRR----V 78
Query: 72 EHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELISKILN------------ 119
+ +Q + ++ + EE+ +E+KY L QP F KR E+I+ I
Sbjct: 79 NALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDE 138
Query: 120 -------------------------------LGVTTFGNHLQVSALLGKENEETLHYLTR 148
+T F N +S ++ + +E L +L
Sbjct: 139 EDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKD 198
Query: 149 VEVTEFEDIKS--GYRVDFYFDENPYFENKVLSKEFHLNESGNPSSKST----------- 195
++V +F D + ++F+F+ N YF N+VL+K + + + S +
Sbjct: 199 IKV-KFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTG 257
Query: 196 -EIKWKSGKDVTKRLSQMQNKASRK------RQHEAPESFLTWFTDHSDAGADDLGED-- 246
+I WK GK+VT + + + K + + + +SF +F + DL +D
Sbjct: 258 CQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAE 317
Query: 247 ------------IKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEE 294
+++ I P + Y+ ++D DD++ +EEG E+ DEEG+E EG+E
Sbjct: 318 AILAADFEIGHFLRERIIPRSVLYFTGEAIED----DDDDYDEEG-EEADEEGEE-EGDE 371
Query: 295 DDDEGEEGEKDE 306
++D + +KD+
Sbjct: 372 ENDPDYDPKKDQ 383
>gi|5174613 nucleosome assembly protein 1-like 4 [Homo sapiens]
Length = 375
Score = 63.9 bits (154), Expect = 2e-10
Identities = 77/315 (24%), Positives = 124/315 (39%), Gaps = 86/315 (27%)
Query: 65 KEQQEAIEHIDEIQNEIDRLNEQDNEEILKVEQKYNKLRQPFFQKRSELI---------- 114
K + I + ++Q + + EE+ +E+KY L QP F KR E I
Sbjct: 61 KAVKRRINALKQLQVRCAHIEAKFYEEVHDLERKYAALYQPLFDKRREFITGDVEPTDAE 120
Query: 115 ------------------SKIL------------------NLGVTTFGNHLQVSALLGKE 138
SK++ T F N +S L+ +
Sbjct: 121 SEWHSENEEEEKLAGDMKSKVVVTEKAAATAEEPDPKGIPEFWFTIFRNVDMLSELVQEY 180
Query: 139 NEETLHYLTRVEVTEFEDIKS--GYRVDFYFDENPYFENKVLSKEFHLN---ESGNPSS- 192
+E L +L ++V +F D + ++F+F+ N YF N VL+K + + + +P S
Sbjct: 181 DEPILKHLQDIKV-KFSDPGQPMSFVLEFHFEPNDYFTNSVLTKTYKMKSEPDKADPFSF 239
Query: 193 --------KSTEIKWKSGKDVTKRLSQMQNKAS-----RKRQHEAP-ESFLTWFTDHSDA 238
I WK GK+VT + + + K R + P ESF +F +
Sbjct: 240 EGPEIVDCDGCTIDWKKGKNVTVKTIKKKQKHKGRGTVRTITKQVPNESFFNFFNPLKAS 299
Query: 239 G-ADDLGED--------------IKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDT 283
G + L ED ++ I P + Y+ ++D DDN EE E E+
Sbjct: 300 GDGESLDEDSEFTLASDFEIGHFFRERIVPRAVLYFTGEAIED----DDNFEEGEEGEEE 355
Query: 284 DEEGDEDEGEEDDDE 298
+ EGDE+ +EDD E
Sbjct: 356 ELEGDEEGEDEDDAE 370
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 52.8 bits (125), Expect = 4e-07
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 183 HLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFTDHSDAGADD 242
H + G P +K + + K ++ + KA E +S T+ D +D
Sbjct: 49 HRSVYGCPLAKKRKTQDKQPQEPAPKRKPFAVKADSSSVDECDDSD---GTEDMDEKEED 105
Query: 243 LGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEG 302
GE+ +D P +DEE E+ + EEEE +E+ DE+ DED GE+ +DE EE
Sbjct: 106 EGEEYSEDNDE--------PGDEDEEDEEGDREEEEEIEEEDEDDDED-GEDVEDEEEEE 156
Query: 303 EKDERDD 309
E++E ++
Sbjct: 157 EEEEEEE 163
Score = 35.0 bits (79), Expect = 0.084
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 10/55 (18%)
Query: 265 DDEEGED--DNEEEEEGLEDTDEEGDEDEGEED--------DDEGEEGEKDERDD 309
DDE+GED D EEEEE E+ +EE + ++ + + D E ++ DE D+
Sbjct: 142 DDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDN 196
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 52.8 bits (125), Expect = 4e-07
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 47/261 (18%)
Query: 69 EAIEHIDEIQNEIDRLNEQDNEEIL-------KVEQKYNKLRQPFFQKRSELISKILNLG 121
E E DE+ N +EQD E ++E K ++P R +L+SK L+
Sbjct: 22 EVPEQDDELYNPE---SEQDKNEKKGSKRKSDRMESTDTKRQKPSVHSR-QLVSKPLSSS 77
Query: 122 VTTFGNHLQVSALLGK-----ENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYF--- 173
V+ N+ ++ + GK +NEE R E + D R+ PY
Sbjct: 78 VS---NNKRIVSTKGKSATEYKNEE----YQRSERNKRLDADRKIRLSSSASREPYKNQP 130
Query: 174 ENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEA----PESFL 229
E + K + +P+ +E + G +V +R S+ + + E E+
Sbjct: 131 EKTCVRKRDPERRAKSPTPDGSE---RIGLEVDRRASRSSQSSKEEVNSEEYGSDHETGS 187
Query: 230 TWFTDHSDAGADDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLED--TDEEG 287
+ +D ++ E +++D+ +DEE E+D EE+EE ED +EE
Sbjct: 188 SGSSDEQGNNTENEEEGVEEDV------------EEDEEVEEDAEEDEEVDEDGEEEEEE 235
Query: 288 DEDEGEEDDDEGEEGEKDERD 308
+E+E EE+++E EE E+DERD
Sbjct: 236 EEEEEEEEEEEEEEYEQDERD 256
Score = 28.5 bits (62), Expect = 7.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 265 DDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEE 301
++EE E++ E E++ + +E D D E D G E
Sbjct: 240 EEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSE 276
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 52.8 bits (125), Expect = 4e-07
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 47/261 (18%)
Query: 69 EAIEHIDEIQNEIDRLNEQDNEEIL-------KVEQKYNKLRQPFFQKRSELISKILNLG 121
E E DE+ N +EQD E ++E K ++P R +L+SK L+
Sbjct: 22 EVPEQDDELYNPE---SEQDKNEKKGSKRKSDRMESTDTKRQKPSVHSR-QLVSKPLSSS 77
Query: 122 VTTFGNHLQVSALLGK-----ENEETLHYLTRVEVTEFEDIKSGYRVDFYFDENPYF--- 173
V+ N+ ++ + GK +NEE R E + D R+ PY
Sbjct: 78 VS---NNKRIVSTKGKSATEYKNEE----YQRSERNKRLDADRKIRLSSSASREPYKNQP 130
Query: 174 ENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEA----PESFL 229
E + K + +P+ +E + G +V +R S+ + + E E+
Sbjct: 131 EKTCVRKRDPERRAKSPTPDGSE---RIGLEVDRRASRSSQSSKEEVNSEEYGSDHETGS 187
Query: 230 TWFTDHSDAGADDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLED--TDEEG 287
+ +D ++ E +++D+ +DEE E+D EE+EE ED +EE
Sbjct: 188 SGSSDEQGNNTENEEEGVEEDV------------EEDEEVEEDAEEDEEVDEDGEEEEEE 235
Query: 288 DEDEGEEDDDEGEEGEKDERD 308
+E+E EE+++E EE E+DERD
Sbjct: 236 EEEEEEEEEEEEEEYEQDERD 256
Score = 28.5 bits (62), Expect = 7.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 265 DDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEE 301
++EE E++ E E++ + +E D D E D G E
Sbjct: 240 EEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSE 276
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 52.4 bits (124), Expect = 5e-07
Identities = 18/47 (38%), Positives = 35/47 (74%)
Query: 263 HMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEKDERDD 309
H +E+ NE+E++ ++ +EE +++E +++DDEGEEG++D+ DD
Sbjct: 2415 HTQEEDSSGSNEDEDDSQDEEEEEEEDEEDDQEDDEGEEGDEDDDDD 2461
Score = 45.8 bits (107), Expect = 5e-05
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 265 DDEEGEDDNEEEEEGLEDTDEEGDEDE--GEEDDDEGEEGEKDE 306
+DE+ D EEEEE E+ D+E DE E E+DDD+G E E DE
Sbjct: 2426 EDEDDSQDEEEEEEEDEEDDQEDDEGEEGDEDDDDDGSEMELDE 2469
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 50.8 bits (120), Expect = 1e-06
Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 44/279 (15%)
Query: 38 RKKTPRPPPVLRPEETSASVGLPKKGEK-EQQEAIEHIDEIQ---NEIDRLNEQDNEEIL 93
+KK P V +E A + ++ +K E++E I+ ++E++ E +RL EQ+ E
Sbjct: 332 KKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAKRKEEERL-EQEKRERK 390
Query: 94 KVEQKYNKLRQPFFQKRSELISKILNLGVTTFGNHLQVSALLGKENEETLHYLTRVEVTE 153
K ++K K R +K +L++K Q A E L VEV
Sbjct: 391 KQKEKERKER---LKKEGKLLTKS------------QREARARAEATLKLLQAQGVEVPS 435
Query: 154 FEDIKSGYRVDFYFDENPYFENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQ 213
+ + + P +E+K K ES S ++ + M+
Sbjct: 436 KDSLPK---------KRPIYEDKKRKKIPQQLESKEVSESM---------ELCAAVEVME 477
Query: 214 NKASRKRQHEAPESFLTWFTDHSDAGADD----LGEDIKDDIWPNPLQYYLVPHMDDEEG 269
K + P D DAG DD ++ + + N + + + ++EE
Sbjct: 478 QGVPEKEETPPPVE-PEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEE 536
Query: 270 EDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEKDERD 308
E++ EEE+E E+ +EE E EG E D+E +E DE+D
Sbjct: 537 EEEEEEEDEESEEEEEEEGESEGSEGDEE-DEKVSDEKD 574
Score = 32.0 bits (71), Expect = 0.71
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 16/58 (27%)
Query: 268 EGEDDNEEEEEGLED-----TDEEGDEDEG-----------EEDDDEGEEGEKDERDD 309
E E++ + E+ GL+D +DEE ++ EG EE+++E EE E+DE +
Sbjct: 491 EPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESE 548
Score = 28.9 bits (63), Expect = 6.0
Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 20/126 (15%)
Query: 174 ENKVLSKEFHLNESGNPSSKSTEIKWKSGKDVTKRLSQMQNKASRKRQHEAPESFLTWFT 233
+ K KE + +K ++K K + K+ Q ++ RK + E +S +T
Sbjct: 230 QKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVT--- 286
Query: 234 DHSDAGADDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGE 293
D G E+ + EDDNE +++ + ++G+++E E
Sbjct: 287 --VDTGVIPASEEKAET---------------PTAAEDDNEGDKKKKDKKKKKGEKEEKE 329
Query: 294 EDDDEG 299
++ +G
Sbjct: 330 KEKKKG 335
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 50.1 bits (118), Expect = 3e-06
Identities = 21/45 (46%), Positives = 35/45 (77%)
Query: 265 DDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEKDERDD 309
+DEE E++ EEEEE E+ +EE +E+E EE+++E EE E++E ++
Sbjct: 260 EDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 304
Score = 49.7 bits (117), Expect = 3e-06
Identities = 20/50 (40%), Positives = 38/50 (76%)
Query: 260 LVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEKDERDD 309
++ H +++E E++ EEEEE E+ +EE +E+E EE+++E EE E++E ++
Sbjct: 254 ILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 303
Score = 48.5 bits (114), Expect = 7e-06
Identities = 20/45 (44%), Positives = 35/45 (77%)
Query: 265 DDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEKDERDD 309
D+EE E++ EEEE+ E+ +EE +E+E EE+++E EE E++E ++
Sbjct: 261 DEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 305
Score = 47.0 bits (110), Expect = 2e-05
Identities = 19/45 (42%), Positives = 35/45 (77%)
Query: 265 DDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEKDERDD 309
++EE E++ EEE+E E+ +EE +E+E EE+++E EE E++E ++
Sbjct: 262 EEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 306
Score = 46.2 bits (108), Expect = 4e-05
Identities = 20/45 (44%), Positives = 34/45 (75%)
Query: 265 DDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEKDERDD 309
++EE E+++EEEEE E+ +EE +E+E EE+++E EE E++ D
Sbjct: 266 EEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPD 310
Score = 44.3 bits (103), Expect = 1e-04
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 250 DIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEKDERDD 309
D+ P L+ ++G +EEE+E E+ +EE +EDE EE+++E EE E++E ++
Sbjct: 234 DLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEE 293
Score = 30.0 bits (66), Expect = 2.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 265 DDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEK 304
++EE E++ EEEEE E+ +EE D ++D +K
Sbjct: 285 EEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQK 324
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 50.1 bits (118), Expect = 3e-06
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 16/78 (20%)
Query: 236 SDAGADDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEED 295
SDA D + E+ +D+ +DEE EDD + EEE ++ D+E ++ EG+ED
Sbjct: 158 SDAEVDGVDEEEEDE------------EGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205
Query: 296 DDEGEEGEK----DERDD 309
DDE E E+ DE D+
Sbjct: 206 DDEVSEEEEEFGLDEEDE 223
Score = 45.4 bits (106), Expect = 6e-05
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 262 PHMDDEEGEDDNEEEEEGLED----TDEEGDEDEGEEDDDEGEEGEKDERDD 309
P D E D EEE+E ED DE+G+E+E +E+DDE E+ E DE DD
Sbjct: 156 PDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDD 207
Score = 45.4 bits (106), Expect = 6e-05
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 17/71 (23%)
Query: 241 DDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGE 300
D+ GED +D+ DDE+GE++ +EE+ ED D EGDED+ E ++E E
Sbjct: 171 DEEGEDEEDE--------------DDEDGEEEEFDEEDD-EDEDVEGDEDDDEVSEEEEE 215
Query: 301 EG--EKDERDD 309
G E+DE +D
Sbjct: 216 FGLDEEDEDED 226
Score = 45.1 bits (105), Expect = 8e-05
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 255 PLQYYLVPHMDDEEGEDDNEEEEEGL--EDTDEEGDEDEGEEDDDEGEEGEKDERDD 309
P YL + +++ D++ E +G+ E+ DEEG EDE +EDD++GEE E DE DD
Sbjct: 140 PQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEG-EDEEDEDDEDGEEEEFDEEDD 195
Score = 45.1 bits (105), Expect = 8e-05
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 265 DDEEGEDDNEEEEEGLEDTDEEGDEDEGEEDDDEGEEGEKDERDD 309
D+++ E EEEE GL++ DE+ DEDE EE+ +GE+ +++ D+
Sbjct: 203 DEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDE 247
Score = 36.2 bits (82), Expect = 0.038
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 232 FTDHSDAGADDLGEDIKDDIWPNPLQYYLVPHMDDEEGEDDNEEEEEGLEDTDEEGDEDE 291
F + D D G++ D++ ++ L DEE ED++E+EEE EEG + E
Sbjct: 190 FDEEDDEDEDVEGDEDDDEVSEEEEEFGL-----DEEDEDEDEDEEE------EEGGKGE 238
Query: 292 --GEEDDDEGEE 301
E DDEGE+
Sbjct: 239 KRKRETDDEGED 250
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.131 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,692,151
Number of Sequences: 37866
Number of extensions: 747164
Number of successful extensions: 22205
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 265
Number of HSP's that attempted gapping in prelim test: 7583
Number of HSP's gapped (non-prelim): 7020
length of query: 309
length of database: 18,247,518
effective HSP length: 102
effective length of query: 207
effective length of database: 14,385,186
effective search space: 2977733502
effective search space used: 2977733502
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.