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Search of human proteins with 169166894
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169166894 PREDICTED: hypothetical protein [Homo sapiens]
(145 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169166894 PREDICTED: hypothetical protein [Homo sapiens] 296 5e-81
gi|169166324 PREDICTED: hypothetical protein [Homo sapiens] 296 5e-81
gi|169167201 PREDICTED: hypothetical protein [Homo sapiens] 293 3e-80
gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens] 38 0.003
gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens] 38 0.003
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] 37 0.004
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens] 37 0.004
gi|40353727 synaptopodin isoform A [Homo sapiens] 35 0.017
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 35 0.017
gi|24431933 reticulon 4 isoform B [Homo sapiens] 35 0.022
gi|47519490 reticulon 4 isoform D [Homo sapiens] 35 0.022
gi|24431935 reticulon 4 isoform A [Homo sapiens] 35 0.022
gi|117938759 GNAS complex locus XLas [Homo sapiens] 35 0.022
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 35 0.022
gi|18079216 CASK interacting protein 1 [Homo sapiens] 34 0.038
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 34 0.038
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 34 0.038
gi|154354983 regulating synaptic membrane exocytosis 2 isoform a... 34 0.038
gi|154354981 regulating synaptic membrane exocytosis 2 isoform b... 34 0.038
gi|148276998 zinc finger protein 628 [Homo sapiens] 34 0.038
gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens] 34 0.049
gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens] 34 0.049
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 34 0.049
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 34 0.049
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 34 0.049
gi|195963410 MEF2 activating motif and SAP domain containing tra... 34 0.049
gi|32698970 MEF2 activating motif and SAP domain containing tran... 34 0.049
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 34 0.049
gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo sapi... 34 0.049
gi|47132532 suppression of tumorigenicity 5 isoform 1 [Homo sapi... 34 0.049
>gi|169166894 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 296 bits (757), Expect = 5e-81
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA 60
MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA
Sbjct: 1 MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA 60
Query: 61 QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA 120
QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA
Sbjct: 61 QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA 120
Query: 121 YEVGPIFTLTYPYLPDEDPEAQKNS 145
YEVGPIFTLTYPYLPDEDPEAQKNS
Sbjct: 121 YEVGPIFTLTYPYLPDEDPEAQKNS 145
>gi|169166324 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 296 bits (757), Expect = 5e-81
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA 60
MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA
Sbjct: 1 MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA 60
Query: 61 QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA 120
QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA
Sbjct: 61 QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA 120
Query: 121 YEVGPIFTLTYPYLPDEDPEAQKNS 145
YEVGPIFTLTYPYLPDEDPEAQKNS
Sbjct: 121 YEVGPIFTLTYPYLPDEDPEAQKNS 145
>gi|169167201 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 293 bits (751), Expect = 3e-80
Identities = 144/145 (99%), Positives = 144/145 (99%)
Query: 1 MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA 60
MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERL DYATARARA
Sbjct: 1 MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLTDYATARARA 60
Query: 61 QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA 120
QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA
Sbjct: 61 QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA 120
Query: 121 YEVGPIFTLTYPYLPDEDPEAQKNS 145
YEVGPIFTLTYPYLPDEDPEAQKNS
Sbjct: 121 YEVGPIFTLTYPYLPDEDPEAQKNS 145
>gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens]
Length = 345
Score = 38.1 bits (87), Expect = 0.003
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 58 ARAQPASSAAQLP----RSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSR 102
A A+PASS Q P + RPP A P PP P Q GG G SR
Sbjct: 2 AAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGSSR 50
>gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens]
Length = 346
Score = 38.1 bits (87), Expect = 0.003
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 58 ARAQPASSAAQLP----RSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSR 102
A A+PASS Q P + RPP A P PP P Q GG G SR
Sbjct: 2 AAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGSSR 50
>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 37.4 bits (85), Expect = 0.004
Identities = 31/86 (36%), Positives = 33/86 (38%), Gaps = 16/86 (18%)
Query: 43 RKGDTERLRDYATARARAQPAS--------------SAAQLPRSHRPPAPSAPAHLPAP- 87
R G +LR T RARAQ Q PRSH P P +H AP
Sbjct: 84 RAGPDAQLRAARTHRARAQTPQLRREAACAGSFFFRKCRQSPRSHGQPFPQLRSHWQAPR 143
Query: 88 -PLPAQEGGTTGTLSREGRRAAFDGG 112
PAQEGG RE A GG
Sbjct: 144 QGWPAQEGGGRRPSRREEAAALAGGG 169
>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 37.4 bits (85), Expect = 0.004
Identities = 31/86 (36%), Positives = 33/86 (38%), Gaps = 16/86 (18%)
Query: 43 RKGDTERLRDYATARARAQPAS--------------SAAQLPRSHRPPAPSAPAHLPAP- 87
R G +LR T RARAQ Q PRSH P P +H AP
Sbjct: 84 RAGPDAQLRAARTHRARAQTPQLRREAACAGSFFFRKCRQSPRSHGQPFPQLRSHWQAPR 143
Query: 88 -PLPAQEGGTTGTLSREGRRAAFDGG 112
PAQEGG RE A GG
Sbjct: 144 QGWPAQEGGGRRPSRREEAAALAGGG 169
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 35.4 bits (80), Expect = 0.017
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 10 PEAPDTAPLDEKLASSDDSISSAIPPT--RPKLRRRKGDTERLRDYATARARAQPASSAA 67
P P P+ S+ S+S P T RP R+ + R A R A P S+ A
Sbjct: 720 PPLPPPPPMSPSW--SERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGA 777
Query: 68 QLPRSHRPPAPSAPAHLPAPPLP 90
+ PR PP P P PP P
Sbjct: 778 ENPRPFSPPRAPPPPPPPPPPPP 800
Score = 29.3 bits (64), Expect = 1.2
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 34 PPTRPKLRRRKGDTERLRDYATARARAQPASSAAQLPRSHRPPAPSA----PAHLPAPPL 89
PP P++R + A + A P ++ A +PRS P PS+ + LPAPP
Sbjct: 796 PPPPPRMRSPQP--------ARPGSAAVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPR 847
Query: 90 P 90
P
Sbjct: 848 P 848
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 35.4 bits (80), Expect = 0.017
Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 12/103 (11%)
Query: 2 RERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARAQ 61
R+ AGGK + P + +L + S IPP P+L G+T A AR
Sbjct: 115 RDVAGGKTGQGPGSRAPSPRLPNKTIS-GPLIPPASPRL----GNTSE----AHGAARTA 165
Query: 62 PASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREG 104
P P PP P P LP PPLP+ T +S G
Sbjct: 166 PPRPNVPAPPPPTPPPPPPP--LP-PPLPSSSPIKTPLVSPPG 205
Score = 32.3 bits (72), Expect = 0.14
Identities = 31/93 (33%), Positives = 37/93 (39%), Gaps = 19/93 (20%)
Query: 10 PEAPDTAPLDEKLASSDDSISSAI-----PPTRPKLRRRKGDTERLRDYATARARAQPAS 64
P P PL SD ++ + PP P L L +A+PAS
Sbjct: 229 PPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPL-------PLLPPCGYPGLKAEPAS 281
Query: 65 SA--AQLPRSHRPPAP-----SAPAHLPAPPLP 90
A AQ P + PP P S A LPAPPLP
Sbjct: 282 PAQDAQEPPAPPPPLPPYASCSPRASLPAPPLP 314
>gi|24431933 reticulon 4 isoform B [Homo sapiens]
Length = 373
Score = 35.0 bits (79), Expect = 0.022
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 7 GKNPEAPDTAPLDEKLASSDDS-ISSAIPPTRPKLRRRKGDTERLRDYATARARAQPASS 65
G P AP AP E+ S D S +SS +P P L +L + AR P
Sbjct: 92 GPLPAAPPVAP--ERQPSWDPSPVSSTVPAPSP-LSAAAVSPSKLPEDDEPPARPPPPPP 148
Query: 66 AAQLPRSH---RPPAPSAPAHLPAPPLPAQEGGTTGTL 100
A+ P++ PPAP APA P+ P + G++G++
Sbjct: 149 ASVSPQAEPVWTPPAP-APAAPPSTPAAPKRRGSSGSV 185
>gi|47519490 reticulon 4 isoform D [Homo sapiens]
Length = 392
Score = 35.0 bits (79), Expect = 0.022
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 7 GKNPEAPDTAPLDEKLASSDDS-ISSAIPPTRPKLRRRKGDTERLRDYATARARAQPASS 65
G P AP AP E+ S D S +SS +P P L +L + AR P
Sbjct: 92 GPLPAAPPVAP--ERQPSWDPSPVSSTVPAPSP-LSAAAVSPSKLPEDDEPPARPPPPPP 148
Query: 66 AAQLPRSH---RPPAPSAPAHLPAPPLPAQEGGTTGTL 100
A+ P++ PPAP APA P+ P + G++G++
Sbjct: 149 ASVSPQAEPVWTPPAP-APAAPPSTPAAPKRRGSSGSV 185
>gi|24431935 reticulon 4 isoform A [Homo sapiens]
Length = 1192
Score = 35.0 bits (79), Expect = 0.022
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 7 GKNPEAPDTAPLDEKLASSDDS-ISSAIPPTRPKLRRRKGDTERLRDYATARARAQPASS 65
G P AP AP E+ S D S +SS +P P L +L + AR P
Sbjct: 92 GPLPAAPPVAP--ERQPSWDPSPVSSTVPAPSP-LSAAAVSPSKLPEDDEPPARPPPPPP 148
Query: 66 AAQLPRSH---RPPAPSAPAHLPAPPLPAQEGGTTGTL 100
A+ P++ PPAP APA P+ P + G++G++
Sbjct: 149 ASVSPQAEPVWTPPAP-APAAPPSTPAAPKRRGSSGSV 185
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 35.0 bits (79), Expect = 0.022
Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 7 GKNPEAPDT-APLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARAQPASS 65
G PEAP A + + A + A PT P + R A A PAS
Sbjct: 468 GAAPEAPAAPAAAETRAAHVAPAAPDAGAPTAPAASATRAAQVR------RAASAAPASG 521
Query: 66 AAQLPRSH-RPPAPSAPAHLPAPPLPAQEGGTTG-TLSREGRRAAFDGGV 113
A + + H RPP+P A P P P + G + S GRR +D GV
Sbjct: 522 ARR--KIHLRPPSPEIQAADPPTPRPTRASAWRGKSESSRGRRVYYDEGV 569
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 35.0 bits (79), Expect = 0.022
Identities = 30/82 (36%), Positives = 33/82 (40%), Gaps = 12/82 (14%)
Query: 34 PPTRPKLRRRKGDTERLRDYATARARAQPASSAAQLPRSHRPPAPSA---PAHLPAPPLP 90
PP R R+G + R A RA AS+ LPR PP P A P P P P
Sbjct: 43 PPARLPRNGRRGPLWKGRGPA---GRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAP 99
Query: 91 ------AQEGGTTGTLSREGRR 106
A E SREGRR
Sbjct: 100 RASSLAAPEPQVGDWTSREGRR 121
Score = 27.3 bits (59), Expect = 4.6
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Query: 30 SSAIPPTRPKLRRRKGDTERLRDYATARARAQPASSAAQLPRSHRPPAPSAPAHLPAPPL 89
S A P R + +G LR + A+ SS A P P P L +PP
Sbjct: 149 SCAPHPAREGMATTRGPEAGLR---VSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPC 205
Query: 90 PAQEGGTTGTLSR 102
PA LSR
Sbjct: 206 PASSRAFRSCLSR 218
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 34.3 bits (77), Expect = 0.038
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 37 RPKLRRRKGDTE-----RLRDYATARARAQPASSAAQLPRSHRPPAPSAP-----AHLPA 86
RPK + R+ E + T R +PAS A P PP P+ P AHL
Sbjct: 1151 RPKAKEREAGPEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHL-- 1208
Query: 87 PPLPAQEG 94
PPLP EG
Sbjct: 1209 PPLPPPEG 1216
Score = 26.9 bits (58), Expect = 6.0
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Query: 40 LRRRKGDTERLRDYATARARAQPASSAAQLPRSHRPPAPS--------APAHLPAPPLP- 90
++RR G + +R A A + S A PR PP P A A+L P+P
Sbjct: 910 VQRRVGRSHSVRAPAGADKNVNRSQSFAVRPRKKGPPPPPPKRSSSALASANLADEPVPD 969
Query: 91 -AQEGGTTGTLSREGRRAAFDGGVYLESNGA 120
E G G ++ R + G V S G+
Sbjct: 970 AEPEDGLLGVRAQCRRASDLAGSVDTGSAGS 1000
>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 34.3 bits (77), Expect = 0.038
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 18/95 (18%)
Query: 28 SISSAIPPTRPKLRRRKGDTERLRDYAT-ARARAQPASSAAQLPRS-----------HRP 75
S+SS++ P P L+R E LR A A + A+ Q P HRP
Sbjct: 203 SVSSSLSPG-PPLQRSSSLNETLRSAAAHAESSARECGKRTQRPEQRFLCRGSSFCGHRP 261
Query: 76 PA-----PSAPAHLPAPPLPAQEGGTTGTLSREGR 105
P P P P PA G T GT + GR
Sbjct: 262 QRLHPGRPLPPQRRPPGPAPAAAGATRGTAAPPGR 296
>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
sapiens]
Length = 449
Score = 34.3 bits (77), Expect = 0.038
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 18/95 (18%)
Query: 28 SISSAIPPTRPKLRRRKGDTERLRDYAT-ARARAQPASSAAQLPRS-----------HRP 75
S+SS++ P P L+R E LR A A + A+ Q P HRP
Sbjct: 203 SVSSSLSPG-PPLQRSSSLNETLRSAAAHAESSARECGKRTQRPEQRFLCRGSSFCGHRP 261
Query: 76 PA-----PSAPAHLPAPPLPAQEGGTTGTLSREGR 105
P P P P PA G T GT + GR
Sbjct: 262 QRLHPGRPLPPQRRPPGPAPAAAGATRGTAAPPGR 296
>gi|154354983 regulating synaptic membrane exocytosis 2 isoform a
[Homo sapiens]
Length = 1349
Score = 34.3 bits (77), Expect = 0.038
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 19 DEKLASSD--DSISSAIPPTRPKLRR----RKGDTERLRDYATARAR-AQPASSAAQLPR 71
D LA++D DS S + RP +R R+ E R Y+ R R AQ SS AQ
Sbjct: 370 DVSLANADLEDSRISMLRMDRPSRQRSISERRAAMENQRSYSMERTREAQGPSSYAQRTT 429
Query: 72 SHRPPAP-SAPAHLPAPPL 89
+H PP P +P + P L
Sbjct: 430 NHSPPTPRRSPLPIDRPDL 448
>gi|154354981 regulating synaptic membrane exocytosis 2 isoform b
[Homo sapiens]
Length = 1163
Score = 34.3 bits (77), Expect = 0.038
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 19 DEKLASSD--DSISSAIPPTRPKLRR----RKGDTERLRDYATARAR-AQPASSAAQLPR 71
D LA++D DS S + RP +R R+ E R Y+ R R AQ SS AQ
Sbjct: 178 DVSLANADLEDSRISMLRMDRPSRQRSISERRAAMENQRSYSMERTREAQGPSSYAQRTT 237
Query: 72 SHRPPAP-SAPAHLPAPPL 89
+H PP P +P + P L
Sbjct: 238 NHSPPTPRRSPLPIDRPDL 256
>gi|148276998 zinc finger protein 628 [Homo sapiens]
Length = 1055
Score = 34.3 bits (77), Expect = 0.038
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 61 QPASSAAQLPRSHRPPAPSAPAHLPAPP----LPAQEGGTTGTLSREGRRAAFDGG 112
Q A +P S +PP P P PAPP LP+ G G +R+G RA G
Sbjct: 712 QTAQGLQLIPSSVQPPTPPPP---PAPPKLILLPSSSAGAGGGRARQGPRAVGKAG 764
Score = 30.0 bits (66), Expect = 0.71
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Query: 58 ARAQPASSAAQLPRSHRPPAPSAPAHLPAPPLPA 91
A QP + A+ P++ +PP+P LP PP PA
Sbjct: 317 AAPQPQEAPAEAPKADQPPSP-----LPQPPPPA 345
Score = 28.9 bits (63), Expect = 1.6
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 56 ARARAQPASSAAQLPRSHRPPAPSAPAHLPAPPLPA 91
A R P + AA++ P AP+AP P P PA
Sbjct: 409 AAGRPPPQAEAAEVTCPQEPLAPAAPVPPPPPSAPA 444
>gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens]
Length = 572
Score = 33.9 bits (76), Expect = 0.049
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 10 PEAPDT--APLDEKLASSDDSISSAIPPTRPKLRRRK---GDTERLRDYATARARAQPAS 64
PEAP AP + + + P P+LRRR G A R S
Sbjct: 311 PEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDS 370
Query: 65 SAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGT 99
S + P HRPP P++P L P + G TT +
Sbjct: 371 SGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTSS 405
>gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens]
Length = 668
Score = 33.9 bits (76), Expect = 0.049
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 10 PEAPDT--APLDEKLASSDDSISSAIPPTRPKLRRRK---GDTERLRDYATARARAQPAS 64
PEAP AP + + + P P+LRRR G A R S
Sbjct: 407 PEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDS 466
Query: 65 SAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGT 99
S + P HRPP P++P L P + G TT +
Sbjct: 467 SGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTSS 501
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 33.9 bits (76), Expect = 0.049
Identities = 37/121 (30%), Positives = 46/121 (38%), Gaps = 20/121 (16%)
Query: 6 GGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKL-RRRKGDTERLRDYATARARAQPAS 64
GG+ P PL ++ A+ PP RP R+G R A +R +
Sbjct: 191 GGRPKSQP---PLPQETAAPAPQPGPTAPPARPPAYESREGPRGR------AESRGSGPA 241
Query: 65 SAAQLPRSHRPPAPSAPAHLPAPPLP-AQEGGTTGTLSREGRRAAFDGGVYLESNGAYEV 123
A LP PAH PAPP P +EG G S GRR E +G V
Sbjct: 242 QPAHLPLP-------GPAHSPAPPAPELREGRAPG--STAGRRPRPREPQAAEESGCATV 292
Query: 124 G 124
G
Sbjct: 293 G 293
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 33.9 bits (76), Expect = 0.049
Identities = 37/121 (30%), Positives = 46/121 (38%), Gaps = 20/121 (16%)
Query: 6 GGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKL-RRRKGDTERLRDYATARARAQPAS 64
GG+ P PL ++ A+ PP RP R+G R A +R +
Sbjct: 191 GGRPKSQP---PLPQETAAPAPQPGPTAPPARPPAYESREGPRGR------AESRGSGPA 241
Query: 65 SAAQLPRSHRPPAPSAPAHLPAPPLP-AQEGGTTGTLSREGRRAAFDGGVYLESNGAYEV 123
A LP PAH PAPP P +EG G S GRR E +G V
Sbjct: 242 QPAHLPLP-------GPAHSPAPPAPELREGRAPG--STAGRRPRPREPQAAEESGCATV 292
Query: 124 G 124
G
Sbjct: 293 G 293
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 33.9 bits (76), Expect = 0.049
Identities = 37/121 (30%), Positives = 46/121 (38%), Gaps = 20/121 (16%)
Query: 6 GGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKL-RRRKGDTERLRDYATARARAQPAS 64
GG+ P PL ++ A+ PP RP R+G R A +R +
Sbjct: 191 GGRPKSQP---PLPQETAAPAPQPGPTAPPARPPAYESREGPRGR------AESRGSGPA 241
Query: 65 SAAQLPRSHRPPAPSAPAHLPAPPLP-AQEGGTTGTLSREGRRAAFDGGVYLESNGAYEV 123
A LP PAH PAPP P +EG G S GRR E +G V
Sbjct: 242 QPAHLPLP-------GPAHSPAPPAPELREGRAPG--STAGRRPRPREPQAAEESGCATV 292
Query: 124 G 124
G
Sbjct: 293 G 293
>gi|195963410 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 1 [Homo sapiens]
Length = 415
Score = 33.9 bits (76), Expect = 0.049
Identities = 29/68 (42%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 32 AIPPTRPKLRRRKGDT----ERLRDYATARARAQPASSAAQLPRSHRPPAPSA---PAHL 84
A P RPK RR RL+ A A AR Q S SHRPP P A P
Sbjct: 206 APPRERPKPRREDSPAGAPWPRLKPKALAAARRQ--GSVKPSAASHRPPLPRAADTPGTA 263
Query: 85 PAP-PLPA 91
PAP P PA
Sbjct: 264 PAPTPTPA 271
>gi|32698970 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 2 [Homo sapiens]
Length = 312
Score = 33.9 bits (76), Expect = 0.049
Identities = 29/68 (42%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 32 AIPPTRPKLRRRKGDT----ERLRDYATARARAQPASSAAQLPRSHRPPAPSA---PAHL 84
A P RPK RR RL+ A A AR Q S SHRPP P A P
Sbjct: 103 APPRERPKPRREDSPAGAPWPRLKPKALAAARRQ--GSVKPSAASHRPPLPRAADTPGTA 160
Query: 85 PAP-PLPA 91
PAP P PA
Sbjct: 161 PAPTPTPA 168
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 33.9 bits (76), Expect = 0.049
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 23 ASSDDSISSAIP-----PTRPKLRRRKGDTERLRDYATARARAQPASSAAQLPRSHRPPA 77
+ D+ + +IP + P RRK R R AR+R+QP SA P + RPP
Sbjct: 77 SGGDEKVLPSIPLRCHSSSSPVCPRRK---PRPRPQPRARSRSQPGLSAPPPPPA-RPPP 132
Query: 78 PSAPAHLPAPPLPAQEGGTTGTLSREGRR 106
P P PAP A G + SR G R
Sbjct: 133 PPPPPPPPAPRPRAWRG--SRRRSRPGSR 159
>gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo
sapiens]
Length = 1137
Score = 33.9 bits (76), Expect = 0.049
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 16/90 (17%)
Query: 2 RERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDY-ATARARA 60
RE +G P P +P ++L S + P +PK R +Y A ++
Sbjct: 354 REGSGSTKPGTPGNSPSSQRLPSKSSLDPAVNPVPKPK---------RTFEYEADKNPKS 404
Query: 61 QPASSAAQLPRSHRPPAPSAPAHLPAPPLP 90
+P++ LP S P P+AP LP+ P P
Sbjct: 405 KPSNG---LPPS---PTPAAPPPLPSTPAP 428
>gi|47132532 suppression of tumorigenicity 5 isoform 1 [Homo
sapiens]
Length = 1137
Score = 33.9 bits (76), Expect = 0.049
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 16/90 (17%)
Query: 2 RERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDY-ATARARA 60
RE +G P P +P ++L S + P +PK R +Y A ++
Sbjct: 354 REGSGSTKPGTPGNSPSSQRLPSKSSLDPAVNPVPKPK---------RTFEYEADKNPKS 404
Query: 61 QPASSAAQLPRSHRPPAPSAPAHLPAPPLP 90
+P++ LP S P P+AP LP+ P P
Sbjct: 405 KPSNG---LPPS---PTPAAPPPLPSTPAP 428
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.129 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,246,762
Number of Sequences: 37866
Number of extensions: 388947
Number of successful extensions: 5377
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 473
Number of HSP's that attempted gapping in prelim test: 4160
Number of HSP's gapped (non-prelim): 1642
length of query: 145
length of database: 18,247,518
effective HSP length: 92
effective length of query: 53
effective length of database: 14,763,846
effective search space: 782483838
effective search space used: 782483838
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.