Guide to the Human Genome
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Search of human proteins with 169166894

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169166894 PREDICTED: hypothetical protein [Homo sapiens]
         (145 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169166894 PREDICTED: hypothetical protein [Homo sapiens]           296   5e-81
gi|169166324 PREDICTED: hypothetical protein [Homo sapiens]           296   5e-81
gi|169167201 PREDICTED: hypothetical protein [Homo sapiens]           293   3e-80
gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens]       38   0.003
gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens]       38   0.003
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]            37   0.004
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]            37   0.004
gi|40353727 synaptopodin isoform A [Homo sapiens]                      35   0.017
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    35   0.017
gi|24431933 reticulon 4 isoform B [Homo sapiens]                       35   0.022
gi|47519490 reticulon 4 isoform D [Homo sapiens]                       35   0.022
gi|24431935 reticulon 4 isoform A [Homo sapiens]                       35   0.022
gi|117938759 GNAS complex locus XLas [Homo sapiens]                    35   0.022
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ...    35   0.022
gi|18079216 CASK interacting protein 1 [Homo sapiens]                  34   0.038
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]            34   0.038
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ...    34   0.038
gi|154354983 regulating synaptic membrane exocytosis 2 isoform a...    34   0.038
gi|154354981 regulating synaptic membrane exocytosis 2 isoform b...    34   0.038
gi|148276998 zinc finger protein 628 [Homo sapiens]                    34   0.038
gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens]     34   0.049
gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens]     34   0.049
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]           34   0.049
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]           34   0.049
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]           34   0.049
gi|195963410 MEF2 activating motif and SAP domain containing tra...    34   0.049
gi|32698970 MEF2 activating motif and SAP domain containing tran...    34   0.049
gi|41152235 ubiquitin specific protease 51 [Homo sapiens]              34   0.049
gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo sapi...    34   0.049
gi|47132532 suppression of tumorigenicity 5 isoform 1 [Homo sapi...    34   0.049

>gi|169166894 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 145

 Score =  296 bits (757), Expect = 5e-81
 Identities = 145/145 (100%), Positives = 145/145 (100%)

Query: 1   MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA 60
           MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA
Sbjct: 1   MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA 60

Query: 61  QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA 120
           QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA
Sbjct: 61  QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA 120

Query: 121 YEVGPIFTLTYPYLPDEDPEAQKNS 145
           YEVGPIFTLTYPYLPDEDPEAQKNS
Sbjct: 121 YEVGPIFTLTYPYLPDEDPEAQKNS 145


>gi|169166324 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 145

 Score =  296 bits (757), Expect = 5e-81
 Identities = 145/145 (100%), Positives = 145/145 (100%)

Query: 1   MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA 60
           MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA
Sbjct: 1   MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA 60

Query: 61  QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA 120
           QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA
Sbjct: 61  QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA 120

Query: 121 YEVGPIFTLTYPYLPDEDPEAQKNS 145
           YEVGPIFTLTYPYLPDEDPEAQKNS
Sbjct: 121 YEVGPIFTLTYPYLPDEDPEAQKNS 145


>gi|169167201 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 145

 Score =  293 bits (751), Expect = 3e-80
 Identities = 144/145 (99%), Positives = 144/145 (99%)

Query: 1   MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARA 60
           MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERL DYATARARA
Sbjct: 1   MRERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLTDYATARARA 60

Query: 61  QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA 120
           QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA
Sbjct: 61  QPASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREGRRAAFDGGVYLESNGA 120

Query: 121 YEVGPIFTLTYPYLPDEDPEAQKNS 145
           YEVGPIFTLTYPYLPDEDPEAQKNS
Sbjct: 121 YEVGPIFTLTYPYLPDEDPEAQKNS 145


>gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens]
          Length = 345

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 58  ARAQPASSAAQLP----RSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSR 102
           A A+PASS  Q P    +  RPP     A  P PP P Q GG  G  SR
Sbjct: 2   AAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGSSR 50


>gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens]
          Length = 346

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 58  ARAQPASSAAQLP----RSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSR 102
           A A+PASS  Q P    +  RPP     A  P PP P Q GG  G  SR
Sbjct: 2   AAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGSSR 50


>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 31/86 (36%), Positives = 33/86 (38%), Gaps = 16/86 (18%)

Query: 43  RKGDTERLRDYATARARAQPAS--------------SAAQLPRSHRPPAPSAPAHLPAP- 87
           R G   +LR   T RARAQ                    Q PRSH  P P   +H  AP 
Sbjct: 84  RAGPDAQLRAARTHRARAQTPQLRREAACAGSFFFRKCRQSPRSHGQPFPQLRSHWQAPR 143

Query: 88  -PLPAQEGGTTGTLSREGRRAAFDGG 112
              PAQEGG      RE   A   GG
Sbjct: 144 QGWPAQEGGGRRPSRREEAAALAGGG 169


>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 31/86 (36%), Positives = 33/86 (38%), Gaps = 16/86 (18%)

Query: 43  RKGDTERLRDYATARARAQPAS--------------SAAQLPRSHRPPAPSAPAHLPAP- 87
           R G   +LR   T RARAQ                    Q PRSH  P P   +H  AP 
Sbjct: 84  RAGPDAQLRAARTHRARAQTPQLRREAACAGSFFFRKCRQSPRSHGQPFPQLRSHWQAPR 143

Query: 88  -PLPAQEGGTTGTLSREGRRAAFDGG 112
              PAQEGG      RE   A   GG
Sbjct: 144 QGWPAQEGGGRRPSRREEAAALAGGG 169


>gi|40353727 synaptopodin isoform A [Homo sapiens]
          Length = 903

 Score = 35.4 bits (80), Expect = 0.017
 Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 10  PEAPDTAPLDEKLASSDDSISSAIPPT--RPKLRRRKGDTERLRDYATARARAQPASSAA 67
           P  P   P+      S+ S+S   P T  RP  R+ +    R    A  R  A P S+ A
Sbjct: 720 PPLPPPPPMSPSW--SERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGA 777

Query: 68  QLPRSHRPPAPSAPAHLPAPPLP 90
           + PR   PP    P   P PP P
Sbjct: 778 ENPRPFSPPRAPPPPPPPPPPPP 800



 Score = 29.3 bits (64), Expect = 1.2
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 12/61 (19%)

Query: 34  PPTRPKLRRRKGDTERLRDYATARARAQPASSAAQLPRSHRPPAPSA----PAHLPAPPL 89
           PP  P++R  +         A   + A P ++ A +PRS  P  PS+     + LPAPP 
Sbjct: 796 PPPPPRMRSPQP--------ARPGSAAVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPR 847

Query: 90  P 90
           P
Sbjct: 848 P 848


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 35.4 bits (80), Expect = 0.017
 Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 12/103 (11%)

Query: 2   RERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARAQ 61
           R+ AGGK  + P +     +L +   S    IPP  P+L    G+T      A   AR  
Sbjct: 115 RDVAGGKTGQGPGSRAPSPRLPNKTIS-GPLIPPASPRL----GNTSE----AHGAARTA 165

Query: 62  PASSAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGTLSREG 104
           P       P    PP P  P  LP PPLP+     T  +S  G
Sbjct: 166 PPRPNVPAPPPPTPPPPPPP--LP-PPLPSSSPIKTPLVSPPG 205



 Score = 32.3 bits (72), Expect = 0.14
 Identities = 31/93 (33%), Positives = 37/93 (39%), Gaps = 19/93 (20%)

Query: 10  PEAPDTAPLDEKLASSDDSISSAI-----PPTRPKLRRRKGDTERLRDYATARARAQPAS 64
           P  P   PL      SD ++   +     PP  P L         L        +A+PAS
Sbjct: 229 PPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPL-------PLLPPCGYPGLKAEPAS 281

Query: 65  SA--AQLPRSHRPPAP-----SAPAHLPAPPLP 90
            A  AQ P +  PP P     S  A LPAPPLP
Sbjct: 282 PAQDAQEPPAPPPPLPPYASCSPRASLPAPPLP 314


>gi|24431933 reticulon 4 isoform B [Homo sapiens]
          Length = 373

 Score = 35.0 bits (79), Expect = 0.022
 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 8/98 (8%)

Query: 7   GKNPEAPDTAPLDEKLASSDDS-ISSAIPPTRPKLRRRKGDTERLRDYATARARAQPASS 65
           G  P AP  AP  E+  S D S +SS +P   P L        +L +     AR  P   
Sbjct: 92  GPLPAAPPVAP--ERQPSWDPSPVSSTVPAPSP-LSAAAVSPSKLPEDDEPPARPPPPPP 148

Query: 66  AAQLPRSH---RPPAPSAPAHLPAPPLPAQEGGTTGTL 100
           A+  P++     PPAP APA  P+ P   +  G++G++
Sbjct: 149 ASVSPQAEPVWTPPAP-APAAPPSTPAAPKRRGSSGSV 185


>gi|47519490 reticulon 4 isoform D [Homo sapiens]
          Length = 392

 Score = 35.0 bits (79), Expect = 0.022
 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 8/98 (8%)

Query: 7   GKNPEAPDTAPLDEKLASSDDS-ISSAIPPTRPKLRRRKGDTERLRDYATARARAQPASS 65
           G  P AP  AP  E+  S D S +SS +P   P L        +L +     AR  P   
Sbjct: 92  GPLPAAPPVAP--ERQPSWDPSPVSSTVPAPSP-LSAAAVSPSKLPEDDEPPARPPPPPP 148

Query: 66  AAQLPRSH---RPPAPSAPAHLPAPPLPAQEGGTTGTL 100
           A+  P++     PPAP APA  P+ P   +  G++G++
Sbjct: 149 ASVSPQAEPVWTPPAP-APAAPPSTPAAPKRRGSSGSV 185


>gi|24431935 reticulon 4 isoform A [Homo sapiens]
          Length = 1192

 Score = 35.0 bits (79), Expect = 0.022
 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 8/98 (8%)

Query: 7   GKNPEAPDTAPLDEKLASSDDS-ISSAIPPTRPKLRRRKGDTERLRDYATARARAQPASS 65
           G  P AP  AP  E+  S D S +SS +P   P L        +L +     AR  P   
Sbjct: 92  GPLPAAPPVAP--ERQPSWDPSPVSSTVPAPSP-LSAAAVSPSKLPEDDEPPARPPPPPP 148

Query: 66  AAQLPRSH---RPPAPSAPAHLPAPPLPAQEGGTTGTL 100
           A+  P++     PPAP APA  P+ P   +  G++G++
Sbjct: 149 ASVSPQAEPVWTPPAP-APAAPPSTPAAPKRRGSSGSV 185


>gi|117938759 GNAS complex locus XLas [Homo sapiens]
          Length = 1037

 Score = 35.0 bits (79), Expect = 0.022
 Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 11/110 (10%)

Query: 7   GKNPEAPDT-APLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDYATARARAQPASS 65
           G  PEAP   A  + + A    +   A  PT P     +    R        A A PAS 
Sbjct: 468 GAAPEAPAAPAAAETRAAHVAPAAPDAGAPTAPAASATRAAQVR------RAASAAPASG 521

Query: 66  AAQLPRSH-RPPAPSAPAHLPAPPLPAQEGGTTG-TLSREGRRAAFDGGV 113
           A +  + H RPP+P   A  P  P P +     G + S  GRR  +D GV
Sbjct: 522 ARR--KIHLRPPSPEIQAADPPTPRPTRASAWRGKSESSRGRRVYYDEGV 569


>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
           sapiens]
          Length = 278

 Score = 35.0 bits (79), Expect = 0.022
 Identities = 30/82 (36%), Positives = 33/82 (40%), Gaps = 12/82 (14%)

Query: 34  PPTRPKLRRRKGDTERLRDYATARARAQPASSAAQLPRSHRPPAPSA---PAHLPAPPLP 90
           PP R     R+G   + R  A    RA  AS+   LPR   PP P A   P   P P  P
Sbjct: 43  PPARLPRNGRRGPLWKGRGPA---GRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAP 99

Query: 91  ------AQEGGTTGTLSREGRR 106
                 A E       SREGRR
Sbjct: 100 RASSLAAPEPQVGDWTSREGRR 121



 Score = 27.3 bits (59), Expect = 4.6
 Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 30  SSAIPPTRPKLRRRKGDTERLRDYATARARAQPASSAAQLPRSHRPPAPSAPAHLPAPPL 89
           S A  P R  +   +G    LR    +   A+  SS A       P  P  P  L +PP 
Sbjct: 149 SCAPHPAREGMATTRGPEAGLR---VSGRGARAGSSTAPTRAQASPARPGFPPCLRSPPC 205

Query: 90  PAQEGGTTGTLSR 102
           PA        LSR
Sbjct: 206 PASSRAFRSCLSR 218


>gi|18079216 CASK interacting protein 1 [Homo sapiens]
          Length = 1431

 Score = 34.3 bits (77), Expect = 0.038
 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 12/68 (17%)

Query: 37   RPKLRRRKGDTE-----RLRDYATARARAQPASSAAQLPRSHRPPAPSAP-----AHLPA 86
            RPK + R+   E      +    T   R +PAS  A  P    PP P+ P     AHL  
Sbjct: 1151 RPKAKEREAGPEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHL-- 1208

Query: 87   PPLPAQEG 94
            PPLP  EG
Sbjct: 1209 PPLPPPEG 1216



 Score = 26.9 bits (58), Expect = 6.0
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 40   LRRRKGDTERLRDYATARARAQPASSAAQLPRSHRPPAPS--------APAHLPAPPLP- 90
            ++RR G +  +R  A A      + S A  PR   PP P         A A+L   P+P 
Sbjct: 910  VQRRVGRSHSVRAPAGADKNVNRSQSFAVRPRKKGPPPPPPKRSSSALASANLADEPVPD 969

Query: 91   -AQEGGTTGTLSREGRRAAFDGGVYLESNGA 120
               E G  G  ++  R +   G V   S G+
Sbjct: 970  AEPEDGLLGVRAQCRRASDLAGSVDTGSAGS 1000


>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 449

 Score = 34.3 bits (77), Expect = 0.038
 Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 18/95 (18%)

Query: 28  SISSAIPPTRPKLRRRKGDTERLRDYAT-ARARAQPASSAAQLPRS-----------HRP 75
           S+SS++ P  P L+R     E LR  A  A + A+      Q P             HRP
Sbjct: 203 SVSSSLSPG-PPLQRSSSLNETLRSAAAHAESSARECGKRTQRPEQRFLCRGSSFCGHRP 261

Query: 76  PA-----PSAPAHLPAPPLPAQEGGTTGTLSREGR 105
                  P  P   P  P PA  G T GT +  GR
Sbjct: 262 QRLHPGRPLPPQRRPPGPAPAAAGATRGTAAPPGR 296


>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
           sapiens]
          Length = 449

 Score = 34.3 bits (77), Expect = 0.038
 Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 18/95 (18%)

Query: 28  SISSAIPPTRPKLRRRKGDTERLRDYAT-ARARAQPASSAAQLPRS-----------HRP 75
           S+SS++ P  P L+R     E LR  A  A + A+      Q P             HRP
Sbjct: 203 SVSSSLSPG-PPLQRSSSLNETLRSAAAHAESSARECGKRTQRPEQRFLCRGSSFCGHRP 261

Query: 76  PA-----PSAPAHLPAPPLPAQEGGTTGTLSREGR 105
                  P  P   P  P PA  G T GT +  GR
Sbjct: 262 QRLHPGRPLPPQRRPPGPAPAAAGATRGTAAPPGR 296


>gi|154354983 regulating synaptic membrane exocytosis 2 isoform a
           [Homo sapiens]
          Length = 1349

 Score = 34.3 bits (77), Expect = 0.038
 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 19  DEKLASSD--DSISSAIPPTRPKLRR----RKGDTERLRDYATARAR-AQPASSAAQLPR 71
           D  LA++D  DS  S +   RP  +R    R+   E  R Y+  R R AQ  SS AQ   
Sbjct: 370 DVSLANADLEDSRISMLRMDRPSRQRSISERRAAMENQRSYSMERTREAQGPSSYAQRTT 429

Query: 72  SHRPPAP-SAPAHLPAPPL 89
           +H PP P  +P  +  P L
Sbjct: 430 NHSPPTPRRSPLPIDRPDL 448


>gi|154354981 regulating synaptic membrane exocytosis 2 isoform b
           [Homo sapiens]
          Length = 1163

 Score = 34.3 bits (77), Expect = 0.038
 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 19  DEKLASSD--DSISSAIPPTRPKLRR----RKGDTERLRDYATARAR-AQPASSAAQLPR 71
           D  LA++D  DS  S +   RP  +R    R+   E  R Y+  R R AQ  SS AQ   
Sbjct: 178 DVSLANADLEDSRISMLRMDRPSRQRSISERRAAMENQRSYSMERTREAQGPSSYAQRTT 237

Query: 72  SHRPPAP-SAPAHLPAPPL 89
           +H PP P  +P  +  P L
Sbjct: 238 NHSPPTPRRSPLPIDRPDL 256


>gi|148276998 zinc finger protein 628 [Homo sapiens]
          Length = 1055

 Score = 34.3 bits (77), Expect = 0.038
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 61  QPASSAAQLPRSHRPPAPSAPAHLPAPP----LPAQEGGTTGTLSREGRRAAFDGG 112
           Q A     +P S +PP P  P   PAPP    LP+   G  G  +R+G RA    G
Sbjct: 712 QTAQGLQLIPSSVQPPTPPPP---PAPPKLILLPSSSAGAGGGRARQGPRAVGKAG 764



 Score = 30.0 bits (66), Expect = 0.71
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 5/34 (14%)

Query: 58  ARAQPASSAAQLPRSHRPPAPSAPAHLPAPPLPA 91
           A  QP  + A+ P++ +PP+P     LP PP PA
Sbjct: 317 AAPQPQEAPAEAPKADQPPSP-----LPQPPPPA 345



 Score = 28.9 bits (63), Expect = 1.6
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 56  ARARAQPASSAAQLPRSHRPPAPSAPAHLPAPPLPA 91
           A  R  P + AA++     P AP+AP   P P  PA
Sbjct: 409 AAGRPPPQAEAAEVTCPQEPLAPAAPVPPPPPSAPA 444


>gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens]
          Length = 572

 Score = 33.9 bits (76), Expect = 0.049
 Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 10  PEAPDT--APLDEKLASSDDSISSAIPPTRPKLRRRK---GDTERLRDYATARARAQPAS 64
           PEAP    AP   +     +     + P  P+LRRR    G          A  R    S
Sbjct: 311 PEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDS 370

Query: 65  SAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGT 99
           S +  P  HRPP P++P  L  P   +  G TT +
Sbjct: 371 SGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTSS 405


>gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens]
          Length = 668

 Score = 33.9 bits (76), Expect = 0.049
 Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 10  PEAPDT--APLDEKLASSDDSISSAIPPTRPKLRRRK---GDTERLRDYATARARAQPAS 64
           PEAP    AP   +     +     + P  P+LRRR    G          A  R    S
Sbjct: 407 PEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDS 466

Query: 65  SAAQLPRSHRPPAPSAPAHLPAPPLPAQEGGTTGT 99
           S +  P  HRPP P++P  L  P   +  G TT +
Sbjct: 467 SGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTSS 501


>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 33.9 bits (76), Expect = 0.049
 Identities = 37/121 (30%), Positives = 46/121 (38%), Gaps = 20/121 (16%)

Query: 6   GGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKL-RRRKGDTERLRDYATARARAQPAS 64
           GG+    P   PL ++ A+         PP RP     R+G   R      A +R    +
Sbjct: 191 GGRPKSQP---PLPQETAAPAPQPGPTAPPARPPAYESREGPRGR------AESRGSGPA 241

Query: 65  SAAQLPRSHRPPAPSAPAHLPAPPLP-AQEGGTTGTLSREGRRAAFDGGVYLESNGAYEV 123
             A LP          PAH PAPP P  +EG   G  S  GRR         E +G   V
Sbjct: 242 QPAHLPLP-------GPAHSPAPPAPELREGRAPG--STAGRRPRPREPQAAEESGCATV 292

Query: 124 G 124
           G
Sbjct: 293 G 293


>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 33.9 bits (76), Expect = 0.049
 Identities = 37/121 (30%), Positives = 46/121 (38%), Gaps = 20/121 (16%)

Query: 6   GGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKL-RRRKGDTERLRDYATARARAQPAS 64
           GG+    P   PL ++ A+         PP RP     R+G   R      A +R    +
Sbjct: 191 GGRPKSQP---PLPQETAAPAPQPGPTAPPARPPAYESREGPRGR------AESRGSGPA 241

Query: 65  SAAQLPRSHRPPAPSAPAHLPAPPLP-AQEGGTTGTLSREGRRAAFDGGVYLESNGAYEV 123
             A LP          PAH PAPP P  +EG   G  S  GRR         E +G   V
Sbjct: 242 QPAHLPLP-------GPAHSPAPPAPELREGRAPG--STAGRRPRPREPQAAEESGCATV 292

Query: 124 G 124
           G
Sbjct: 293 G 293


>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 33.9 bits (76), Expect = 0.049
 Identities = 37/121 (30%), Positives = 46/121 (38%), Gaps = 20/121 (16%)

Query: 6   GGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKL-RRRKGDTERLRDYATARARAQPAS 64
           GG+    P   PL ++ A+         PP RP     R+G   R      A +R    +
Sbjct: 191 GGRPKSQP---PLPQETAAPAPQPGPTAPPARPPAYESREGPRGR------AESRGSGPA 241

Query: 65  SAAQLPRSHRPPAPSAPAHLPAPPLP-AQEGGTTGTLSREGRRAAFDGGVYLESNGAYEV 123
             A LP          PAH PAPP P  +EG   G  S  GRR         E +G   V
Sbjct: 242 QPAHLPLP-------GPAHSPAPPAPELREGRAPG--STAGRRPRPREPQAAEESGCATV 292

Query: 124 G 124
           G
Sbjct: 293 G 293


>gi|195963410 MEF2 activating motif and SAP domain containing
           transcriptional regulator isoform 1 [Homo sapiens]
          Length = 415

 Score = 33.9 bits (76), Expect = 0.049
 Identities = 29/68 (42%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 32  AIPPTRPKLRRRKGDT----ERLRDYATARARAQPASSAAQLPRSHRPPAPSA---PAHL 84
           A P  RPK RR          RL+  A A AR Q   S      SHRPP P A   P   
Sbjct: 206 APPRERPKPRREDSPAGAPWPRLKPKALAAARRQ--GSVKPSAASHRPPLPRAADTPGTA 263

Query: 85  PAP-PLPA 91
           PAP P PA
Sbjct: 264 PAPTPTPA 271


>gi|32698970 MEF2 activating motif and SAP domain containing
           transcriptional regulator isoform 2 [Homo sapiens]
          Length = 312

 Score = 33.9 bits (76), Expect = 0.049
 Identities = 29/68 (42%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 32  AIPPTRPKLRRRKGDT----ERLRDYATARARAQPASSAAQLPRSHRPPAPSA---PAHL 84
           A P  RPK RR          RL+  A A AR Q   S      SHRPP P A   P   
Sbjct: 103 APPRERPKPRREDSPAGAPWPRLKPKALAAARRQ--GSVKPSAASHRPPLPRAADTPGTA 160

Query: 85  PAP-PLPA 91
           PAP P PA
Sbjct: 161 PAPTPTPA 168


>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
          Length = 711

 Score = 33.9 bits (76), Expect = 0.049
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 11/89 (12%)

Query: 23  ASSDDSISSAIP-----PTRPKLRRRKGDTERLRDYATARARAQPASSAAQLPRSHRPPA 77
           +  D+ +  +IP      + P   RRK    R R    AR+R+QP  SA   P + RPP 
Sbjct: 77  SGGDEKVLPSIPLRCHSSSSPVCPRRK---PRPRPQPRARSRSQPGLSAPPPPPA-RPPP 132

Query: 78  PSAPAHLPAPPLPAQEGGTTGTLSREGRR 106
           P  P   PAP   A  G  +   SR G R
Sbjct: 133 PPPPPPPPAPRPRAWRG--SRRRSRPGSR 159


>gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo
           sapiens]
          Length = 1137

 Score = 33.9 bits (76), Expect = 0.049
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 16/90 (17%)

Query: 2   RERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDY-ATARARA 60
           RE +G   P  P  +P  ++L S      +  P  +PK         R  +Y A    ++
Sbjct: 354 REGSGSTKPGTPGNSPSSQRLPSKSSLDPAVNPVPKPK---------RTFEYEADKNPKS 404

Query: 61  QPASSAAQLPRSHRPPAPSAPAHLPAPPLP 90
           +P++    LP S   P P+AP  LP+ P P
Sbjct: 405 KPSNG---LPPS---PTPAAPPPLPSTPAP 428


>gi|47132532 suppression of tumorigenicity 5 isoform 1 [Homo
           sapiens]
          Length = 1137

 Score = 33.9 bits (76), Expect = 0.049
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 16/90 (17%)

Query: 2   RERAGGKNPEAPDTAPLDEKLASSDDSISSAIPPTRPKLRRRKGDTERLRDY-ATARARA 60
           RE +G   P  P  +P  ++L S      +  P  +PK         R  +Y A    ++
Sbjct: 354 REGSGSTKPGTPGNSPSSQRLPSKSSLDPAVNPVPKPK---------RTFEYEADKNPKS 404

Query: 61  QPASSAAQLPRSHRPPAPSAPAHLPAPPLP 90
           +P++    LP S   P P+AP  LP+ P P
Sbjct: 405 KPSNG---LPPS---PTPAAPPPLPSTPAP 428


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.129    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,246,762
Number of Sequences: 37866
Number of extensions: 388947
Number of successful extensions: 5377
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 473
Number of HSP's that attempted gapping in prelim test: 4160
Number of HSP's gapped (non-prelim): 1642
length of query: 145
length of database: 18,247,518
effective HSP length: 92
effective length of query: 53
effective length of database: 14,763,846
effective search space: 782483838
effective search space used: 782483838
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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