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Search of human proteins with 169166769
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169166769 PREDICTED: hypothetical protein [Homo sapiens]
(216 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169166769 PREDICTED: hypothetical protein [Homo sapiens] 446 e-126
gi|169166416 PREDICTED: hypothetical protein [Homo sapiens] 446 e-126
gi|169166960 PREDICTED: hypothetical protein [Homo sapiens] 441 e-124
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 50 1e-06
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 49 4e-06
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 48 6e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 48 6e-06
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 47 2e-05
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 47 2e-05
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 47 2e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens] 46 2e-05
gi|19924097 synapsin I isoform Ib [Homo sapiens] 46 2e-05
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 46 2e-05
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 46 3e-05
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 46 3e-05
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 45 4e-05
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 45 6e-05
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 42 3e-04
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 42 4e-04
gi|40806209 WW domain containing E3 ubiquitin protein ligase 2 i... 42 5e-04
gi|40806207 WW domain containing E3 ubiquitin protein ligase 2 i... 42 5e-04
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 41 7e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 41 7e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 41 7e-04
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 41 7e-04
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 41 9e-04
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 0.001
>gi|169166769 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 446 bits (1147), Expect = e-126
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MTVSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
MTVSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS
Sbjct: 1 MTVSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
Query: 61 PPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
PPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP
Sbjct: 61 PPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
Query: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES
Sbjct: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
Query: 181 SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT 216
SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT
Sbjct: 181 SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT 216
>gi|169166416 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 446 bits (1147), Expect = e-126
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MTVSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
MTVSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS
Sbjct: 1 MTVSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
Query: 61 PPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
PPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP
Sbjct: 61 PPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
Query: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES
Sbjct: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
Query: 181 SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT 216
SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT
Sbjct: 181 SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT 216
>gi|169166960 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 441 bits (1135), Expect = e-124
Identities = 214/216 (99%), Positives = 214/216 (99%)
Query: 1 MTVSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
MTVSERRDRKGTLRPQGKNRHQK PPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS
Sbjct: 1 MTVSERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
Query: 61 PPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
PP RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP
Sbjct: 61 PPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
Query: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES
Sbjct: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
Query: 181 SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT 216
SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT
Sbjct: 181 SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT 216
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 50.1 bits (118), Expect = 1e-06
Identities = 61/214 (28%), Positives = 84/214 (39%), Gaps = 23/214 (10%)
Query: 4 SERRDRKGTLRPQGKNRHQKPPPQNRQKKT--RVKSAAARRSRRLGESTAKPG------- 54
++R R + + +G++R + P +R + T R +S +ARR R S A G
Sbjct: 519 AQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTP 578
Query: 55 ARTGHSPPARPGRHRGGCAWTPNQRPEAA---AREARDAGRLRAKRGG-LREPERQRQEV 110
AR G S P R R TP +R + AR R R A+R R P R+R
Sbjct: 579 ARRGRSRSRTPARRRSRSR-TPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRS 637
Query: 111 ------SYRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQP 164
S R R+ P RSR P R R T R+ R P S+
Sbjct: 638 RSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSR---SRTPARRGRSRS 694
Query: 165 RGARRARTRRRTNEESSRLQSQEGDGSGGKDEAS 198
R RR R+R R+ R S+ G +S
Sbjct: 695 RTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSS 728
Score = 47.0 bits (110), Expect = 1e-05
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 29/187 (15%)
Query: 2 TVSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRS--RRLGESTAKPGARTGH 59
T + RR R T +G++R + P + + ++ V+ + RS RR G S ++ AR G
Sbjct: 598 TPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGR 657
Query: 60 SPPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLP 119
S P R + TP AR +GR R++ R R R
Sbjct: 658 SRSRTPARRGRSRSRTP----------ARRSGRSRSRTPARRGRSRSRT----------- 696
Query: 120 PHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEE 179
P R R + +L R R + P+ + + G S SQ RR+R+ +
Sbjct: 697 --PRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQ----RRSRSNSSPEMK 750
Query: 180 SSRLQSQ 186
SR+ S+
Sbjct: 751 KSRISSR 757
Score = 46.2 bits (108), Expect = 2e-05
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 6 RRDRKGTLRPQGKNRHQKPPPQNRQKKT------RVKSAAARRSRRLGESTAKPGARTGH 59
RR R + P+ ++R PP++R+ + KS ++RR R K +R G
Sbjct: 1705 RRSRSASSSPETRSR---TPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGR 1761
Query: 60 SPPARP-GRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATL 118
SP +P G R + ++R + RD R+ R R V+ R R
Sbjct: 1762 SPSPKPRGLQRSR---SRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGS 1818
Query: 119 PPH---PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGA----RRAR 171
H P R S + R R PP ++ KR + P P S+ R + RR+R
Sbjct: 1819 GYHSRSPARQESSRTSSRRRRGRSRTPPTSR-KRSRSRTSPAPWKRSRSRASPATHRRSR 1877
Query: 172 TR 173
+R
Sbjct: 1878 SR 1879
Score = 45.1 bits (105), Expect = 5e-05
Identities = 49/198 (24%), Positives = 74/198 (37%), Gaps = 24/198 (12%)
Query: 3 VSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPP 62
V R + R G++R + P + R + ARR R + A+ R+ P
Sbjct: 631 VRRRSRSRSPARRSGRSRSRTPARRGRSRSR----TPARRGRSRSRTPARRSGRSRSRTP 686
Query: 63 ARPGRHRGGCAWTPNQRPEAAAREARDAGRL---RAKRGGLREPERQRQEVSYRHRATLP 119
AR GR R R + R R R R + G E + + + R R+
Sbjct: 687 ARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSS 746
Query: 120 PHPLRSRRSAPTLGARPRRPTWPPRAQ------LKRGDQQPPPTPSPASQ--PR----GA 167
P +SR + +R R PR++ L+R P P SQ PR G+
Sbjct: 747 PEMKKSR-----ISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGS 801
Query: 168 RRARTRRRTNEESSRLQS 185
+ + + RT SR S
Sbjct: 802 SQPKAKSRTPPRRSRSSS 819
Score = 45.1 bits (105), Expect = 5e-05
Identities = 52/194 (26%), Positives = 74/194 (38%), Gaps = 20/194 (10%)
Query: 4 SERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPP- 62
S R R R G H + P + +T S+ RR R T++ +R+ SP
Sbjct: 1804 SRSRSRVTRRRRGGSGYHSRSPARQESSRT---SSRRRRGRSRTPPTSRKRSRSRTSPAP 1860
Query: 63 -------ARPGRHRGGCAWTP--NQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYR 113
A P HR + TP ++R + R R++ R R R R
Sbjct: 1861 WKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSR 1920
Query: 114 HRA---TLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGA--R 168
R+ T P RSR PT R R T P +R + PP S+ R +
Sbjct: 1921 RRSRSRTPPVTRRRSRSRTPTTRRRSRSRT--PPVTRRRSRSRTPPVTRRRSRSRTSPIT 1978
Query: 169 RARTRRRTNEESSR 182
R R+R RT+ + R
Sbjct: 1979 RRRSRSRTSPVTRR 1992
Score = 42.7 bits (99), Expect = 2e-04
Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 19/186 (10%)
Query: 3 VSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPP 62
V+ RR R T + ++R + PP R+ ++R RRSR + +R+ SP
Sbjct: 1930 VTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPV 1989
Query: 63 ARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHP 122
R R +P R + +R + R R R + R R+ P P
Sbjct: 1990 T---RRRSRSRTSPVTRRRSRSRTSPVTRR--------RSRSRTPPAIRRRSRSRTPLLP 2038
Query: 123 LRSRRSAPTLGARPRRPTWPPR-AQLKRGDQQPPP-------TPSPASQPRGARRARTRR 174
+ RS L R R + PR A+ KR + PP + S + + R A TR
Sbjct: 2039 RKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRN 2098
Query: 175 RTNEES 180
+ +
Sbjct: 2099 HSGSRT 2104
Score = 40.8 bits (94), Expect = 9e-04
Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 27/186 (14%)
Query: 15 PQGKNRHQKPPPQNRQKKT---RVKSAAARRSRRLGESTA--KPGARTGHSPPARPGRHR 69
P+ K Q P P++R + K +R R ES+ K ART R R
Sbjct: 1484 PEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQ-----RSR 1538
Query: 70 GGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQ------EVSYRHRATLPPHPL 123
G + + +P A+ +E ++ + R P RQR EV + R + P
Sbjct: 1539 SGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLS----PR 1594
Query: 124 RSRR-SAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGAR---RARTRRRTNEE 179
RSR S+P + +PR PRAQ P P+P + PR +R ++ R + E
Sbjct: 1595 RSRSGSSPEVKDKPRAA---PRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEG 1651
Query: 180 SSRLQS 185
SS +S
Sbjct: 1652 SSSTES 1657
Score = 38.9 bits (89), Expect = 0.003
Identities = 55/222 (24%), Positives = 78/222 (35%), Gaps = 41/222 (18%)
Query: 18 KNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSP---------------- 61
+++ P R ++R A A+R R + K G SP
Sbjct: 469 RDKSHSHTPSRRMGRSR-SPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRS 527
Query: 62 PARPGRHRG----GCAWTPNQRPEAAAREAR----------DAGRLRAKRGGLREPERQR 107
P R GR R G + + N + +R AR GR R++ R R R
Sbjct: 528 PQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSR 587
Query: 108 QEVSYRHRATLPPH-------PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSP 160
R R+ P P R RS AR R T P +R + P S
Sbjct: 588 TPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSP--VRRRSRSRSPARRSG 645
Query: 161 ASQPR-GARRARTRRRTNEESSRLQSQEGDGSGGKDEASSAA 201
S+ R ARR R+R RT R +S+ G+ + + A
Sbjct: 646 RSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPA 687
Score = 37.4 bits (85), Expect = 0.010
Identities = 49/215 (22%), Positives = 78/215 (36%), Gaps = 38/215 (17%)
Query: 6 RRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAAR-----RSRRLGESTAKPGARTGHS 60
RR R + P + R + P R ++R ++ A R R+ R G S ++ R G S
Sbjct: 654 RRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRS 713
Query: 61 PPARPGRH-RGGCAWTPNQRPEAAAREARD-------AGRLRAKRG-GLREPE-RQRQEV 110
P R R G + + + R +R R+ ++R L P + + +
Sbjct: 714 HSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRL 773
Query: 111 SYRH-----------RATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPP--- 156
S R ++ PP RS S P +R PPR R PPP
Sbjct: 774 SLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRT-----PPRRS--RSSSSPPPKQK 826
Query: 157 --TPSPASQPRGARRARTRRRTNEESSRLQSQEGD 189
TPS S + + + T + S + +
Sbjct: 827 SKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQAN 861
Score = 37.4 bits (85), Expect = 0.010
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 18/195 (9%)
Query: 6 RRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPARP 65
RR R G+ +P+ K+R PP ++R + ++ R S++ P + P R
Sbjct: 795 RRSRSGSSQPKAKSR--TPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQ 852
Query: 66 GRHRGGCAWTPNQRPE-AAAREARDAGRLRAKRGGLREPERQRQEVSY--RHRATLPPHP 122
G A + P+ + E+ L++ R P R S R +++ PP
Sbjct: 853 GSITSPQANEQSVTPQRRSCFESSPDPELKS-----RTPSRHSCSGSSPPRVKSSTPPRQ 907
Query: 123 LRSRRSAPTLGARPR-RPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART-RRRTNEES 180
SR S+P +P+ + PR + G P+PS + RR+R+ +N ES
Sbjct: 908 SPSRSSSP----QPKVKAIISPRQRSHSGSSS--PSPSRVTSRTTPRRSRSVSPCSNVES 961
Query: 181 SRLQSQEGDGSGGKD 195
L GS D
Sbjct: 962 RLLPRYSHSGSSSPD 976
Score = 37.0 bits (84), Expect = 0.013
Identities = 46/189 (24%), Positives = 66/189 (34%), Gaps = 8/189 (4%)
Query: 2 TVSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSP 61
+V+ RR R + + PP R++ RRSR + +R+ +P
Sbjct: 1905 SVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRS-RTP 1963
Query: 62 PARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVS----YRHRAT 117
P R R +P R + +R + R R R R S R R+
Sbjct: 1964 PVT--RRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSR 2021
Query: 118 LPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTP-SPASQPRGARRARTRRRT 176
PP R RS L R R + P A +R + P T S R R R +
Sbjct: 2022 TPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSAS 2081
Query: 177 NEESSRLQS 185
S R +S
Sbjct: 2082 GSSSDRSRS 2090
Score = 36.6 bits (83), Expect = 0.017
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 35/188 (18%)
Query: 6 RRDRKGTLR-PQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPAR 64
R R+G+ P+ K + + PP + + + + AR SRR +++ P R+ +PP
Sbjct: 1666 RTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRS-RTPP-- 1722
Query: 65 PGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLR 124
RHR + P ++ E + R +R P R + + R + P P
Sbjct: 1723 --RHR--------RSPSVSSPEPAEKSRSSRRRRSASSP---RTKTTSRRGRSPSPKPRG 1769
Query: 125 SRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQ 184
+RS R T +R D+ S +SQ RR R+R R SR+
Sbjct: 1770 LQRSRSRSRREKTRTT-------RRRDR------SGSSQSTSRRRQRSRSR-----SRVT 1811
Query: 185 SQEGDGSG 192
+ GSG
Sbjct: 1812 RRRRGGSG 1819
Score = 35.4 bits (80), Expect = 0.037
Identities = 48/187 (25%), Positives = 65/187 (34%), Gaps = 28/187 (14%)
Query: 4 SERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPA 63
S RDR P+ K P + + + + SR S P P
Sbjct: 398 SPTRDRSPPKSPE------KLPQSSSSESSPPSPQPTKVSRHASSSPESP------KPAP 445
Query: 64 RPGRHRGGCAWTPNQRPEAAAREARDA----------GRLRAKRGGLREPERQRQEVSYR 113
PG HR + +P + + R RD GR R+ R R R
Sbjct: 446 APGSHRE-ISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRG 504
Query: 114 HRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTR 173
H + P RSR SA G R P R R Q+P + S +Q RG R+ R
Sbjct: 505 HSRSRSPQWRRSR-SAQRWG----RSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARR 559
Query: 174 RRTNEES 180
R++ S
Sbjct: 560 GRSHSRS 566
Score = 34.3 bits (77), Expect = 0.083
Identities = 46/206 (22%), Positives = 74/206 (35%), Gaps = 30/206 (14%)
Query: 3 VSERRDRKGTLRPQGKNRHQKPPPQNRQK-----KTRVKSAAARRSRRLGESTAKPGART 57
++ +R+R G+ + + P R + + VK +A+ + R ES + P ++
Sbjct: 1510 LTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQER--SESDSSPDSKA 1567
Query: 58 GHSPPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRAT 117
P R R R G + + + + R +R K P Q S
Sbjct: 1568 KTRTPLRQ-RSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKA 1626
Query: 118 LPPH--PLRSRRSAPTLGARPR---------RPTWPPRAQLKRGDQQPPPTP-------- 158
P P RSR + + G P P PP+++ R + P P
Sbjct: 1627 PAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPP 1686
Query: 159 ---SPASQPRGARRARTRRRTNEESS 181
S S P R+AR RR+ SS
Sbjct: 1687 RRRSSRSSPELTRKARLSRRSRSASS 1712
Score = 33.9 bits (76), Expect = 0.11
Identities = 46/209 (22%), Positives = 78/209 (37%), Gaps = 31/209 (14%)
Query: 4 SERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPG---ARTGHS 60
S+ D K + PQ ++ P + +T ++ + S +S ++ +R+G S
Sbjct: 1542 SQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSS 1601
Query: 61 P-----PARPGRHRGGCAWTPNQR---PEAAAREARDA----GRLRAKRGGLR---EPER 105
P P R + G +P + P A R +R GR + G PE
Sbjct: 1602 PEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEH 1661
Query: 106 QRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTP------- 158
+ + R + P P R+ P + P +A+L R + +P
Sbjct: 1662 PPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTP 1721
Query: 159 -----SPA-SQPRGARRARTRRRTNEESS 181
SP+ S P A ++R+ RR SS
Sbjct: 1722 PRHRRSPSVSSPEPAEKSRSSRRRRSASS 1750
Score = 33.5 bits (75), Expect = 0.14
Identities = 55/231 (23%), Positives = 83/231 (35%), Gaps = 67/231 (29%)
Query: 4 SERRDRKGTLRPQG--------KNRHQKPPPQNRQK---KTRVKSAA---ARRSRRLGES 49
S RR+RK + + + K +H+ P P++++K K R +S + A +SRR S
Sbjct: 204 SPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRS 263
Query: 50 TAKPGART---------------------GHSPPARPGRHRGGCA------WTPNQRP-- 80
T+ A + G SP GR G A T QRP
Sbjct: 264 TSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSS 323
Query: 81 -EAAAREA----RDAGRLRAKRGGLR------------EPERQRQEVSYRHRATLPP--- 120
E A ++ D + + ++ R EP ++ RH + P
Sbjct: 324 PETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLAT 383
Query: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLK----RGDQQPPPTPSPASQPRGA 167
PL P A P R PP++ K + PP+P P R A
Sbjct: 384 TPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHA 434
Score = 31.6 bits (70), Expect = 0.54
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 3 VSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPP 62
+ RD + + R P P R +++ +RR +R G+S + R +P
Sbjct: 2682 IDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQR-GDSRSPSHKRRRETPS 2740
Query: 63 ARPGRHR 69
RP RHR
Sbjct: 2741 PRPMRHR 2747
Score = 31.2 bits (69), Expect = 0.70
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 25/108 (23%)
Query: 22 QKPPP-QNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPARPGRHRGGCAWTPNQRP 80
+KPPP + R + R + R SR L S P R SP P+ R
Sbjct: 2666 KKPPPGERRSRSPRKPIDSLRDSRSLSYS---PVERRRPSPQ-------------PSPRD 2709
Query: 81 EAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRS 128
+ ++ R G R +RG R P +R+ R T P P+R R S
Sbjct: 2710 QQSSSSER--GSRRGQRGDSRSPSHKRR------RETPSPRPMRHRSS 2749
Score = 30.4 bits (67), Expect = 1.2
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 116 ATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRR 175
++LP P + + P+ PT P+ ++ G PP P+PA + R + + +
Sbjct: 2566 SSLPVQPEVALKRVPS-------PTPAPKEAVREGR---PPEPTPAKRKRRSSSSSSSSS 2615
Query: 176 TNEESSRLQSQEGDGSGGKDEASSAA 201
++ SS S S +SS++
Sbjct: 2616 SSSSSSSSSSSSSSSSSSSSSSSSSS 2641
Score = 29.3 bits (64), Expect = 2.7
Identities = 47/212 (22%), Positives = 81/212 (38%), Gaps = 37/212 (17%)
Query: 15 PQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPAR---------- 64
P+ +R + + + K + +RRSR S + PG R G P+R
Sbjct: 1411 PRTPSRERSSSASSPEMKDGLPRTPSRRSR----SGSSPGLRDGSGTPSRHSLSGSSPGM 1466
Query: 65 ------PGRHRGGCAWTPNQRPEAAAREARDAGRLRAK---RGGLREPERQRQ-EVSYRH 114
P R R C +P P+A + R R + P+R+R S
Sbjct: 1467 KDIPRTPSRGRSECDSSP--EPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVD 1524
Query: 115 RATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRR 174
+ T+ PL R + + +P+ P+ + + +P ++ R R R+R
Sbjct: 1525 QKTVARTPLGQRSRSGSSQELDVKPSASPQER-----SESDSSPDSKAKTRTPLRQRSRS 1579
Query: 175 RTNEE---SSRL---QSQEGDGSGGKDEASSA 200
++ E SRL +S+ G KD+ +A
Sbjct: 1580 GSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAA 1611
Score = 29.3 bits (64), Expect = 2.7
Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 29/174 (16%)
Query: 3 VSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPP 62
V+ +R T P+ R +PP K+ R S+++ S S++ + + S
Sbjct: 2574 VALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSS 2633
Query: 63 ARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHP 122
+ + + + P +A L +P ++ R+ P P
Sbjct: 2634 SSSSSSSSSSSSSSSPSPAKPGPQA------------LPKPASPKKPPPGERRSRSPRKP 2681
Query: 123 LRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSP-----ASQPRGARRAR 171
+ S R + +L P ++R ++P P PSP +S RG+RR +
Sbjct: 2682 IDSLRDSRSLSYSP----------VER--RRPSPQPSPRDQQSSSSERGSRRGQ 2723
Score = 28.9 bits (63), Expect = 3.5
Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Query: 75 TPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGA 134
+P P+ A RE R AKR S ++ S S+ + +
Sbjct: 2581 SPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2640
Query: 135 RPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRR 175
+ P + K G Q P SP P G RR+R+ R+
Sbjct: 2641 SSSSSSSSP-SPAKPGPQALPKPASPKKPPPGERRSRSPRK 2680
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 48.5 bits (114), Expect = 4e-06
Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 12/193 (6%)
Query: 8 DRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPARPGR 67
DR+ + + R Q + R+++ +SA R R + R + R G+
Sbjct: 352 DRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQ 411
Query: 68 HRGGCAWTPNQRPEAAAREA---RDAGRLRAKRGGL---REPERQRQEVSYRHRATLPPH 121
T QR RE+ R+ GR R K+ G RE + RQ R R+TL +
Sbjct: 412 RE-----TEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLYVN 466
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESS 181
P + + + P RPT R + D + T P +P A R R R E
Sbjct: 467 PPPRTARSGVVQSDPNRPTRGIRWKSSPEDPKAASTRFPWGRPAKASRGRVAGRRRWE-P 525
Query: 182 RLQSQEGDGSGGK 194
RL + G G G+
Sbjct: 526 RLGEKRGQGGEGR 538
Score = 32.7 bits (73), Expect = 0.24
Identities = 42/195 (21%), Positives = 66/195 (33%), Gaps = 10/195 (5%)
Query: 4 SERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSP-- 61
+ER + R + K+RH+K +++ R K + R K R
Sbjct: 71 TERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERE 130
Query: 62 PARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPH 121
R G RG T QR R+A + R R+ ER RQ+ R +
Sbjct: 131 TEREGE-RGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKN----- 184
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESS 181
R R T ++ R ++ T + + R R R R+R E
Sbjct: 185 --RQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTERER 242
Query: 182 RLQSQEGDGSGGKDE 196
Q++ S + E
Sbjct: 243 EKQAERERASERETE 257
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 48.1 bits (113), Expect = 6e-06
Identities = 44/160 (27%), Positives = 60/160 (37%), Gaps = 24/160 (15%)
Query: 15 PQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKP------GARTGHSPPARPGRH 68
PQG N+ Q PPP+ K +S+ KP G PP RPG+
Sbjct: 146 PQGGNQSQGPPPRPG-KPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKP 204
Query: 69 RGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRS 128
G NQ R + G +GG +P+ PPHP + +
Sbjct: 205 EGPPPQGGNQSQGPPPRPGKPEGP--PSQGG-NKPQGP------------PPHPGKPQGP 249
Query: 129 APTLGARPRRPTWP--PRAQLKRGDQQPPPTPSPASQPRG 166
P G +P+RP P P+ G P P PA +P+G
Sbjct: 250 PPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQG 289
Score = 39.7 bits (91), Expect = 0.002
Identities = 44/171 (25%), Positives = 62/171 (36%), Gaps = 25/171 (14%)
Query: 15 PQGKNRHQKPPPQNRQKKTRVKSAAARRS---RRLGESTAKP--GARTGHSPPARPGRHR 69
PQG N+ Q PPP+ + + + R G+ +P G PP RPG+
Sbjct: 62 PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPE 121
Query: 70 GGCAWTPNQ---------RPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
G NQ +PE + + + R G +PE + + + PP
Sbjct: 122 GPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG--KPEGPPPQGGNQSQGP-PP 178
Query: 121 HPLRSRRSAPTLG-------ARPRRPTWPPRAQLKRGDQQPPPTPSPASQP 164
HP + P G RP +P PP Q Q PPP P P
Sbjct: 179 HPGKPEGPPPQGGNQSQGPPPRPGKPEGPP-PQGGNQSQGPPPRPGKPEGP 228
Score = 36.6 bits (83), Expect = 0.017
Identities = 43/156 (27%), Positives = 54/156 (34%), Gaps = 14/156 (8%)
Query: 14 RPQGKNRHQKPPPQNRQKKTRVKSAAARRS---RRLGESTAKP--GARTGHSPPARPGRH 68
RPQG N+ Q+ PP + + R + R G+ P G PP RPG+
Sbjct: 40 RPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKP 99
Query: 69 RGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRS 128
G NQ R + G +GG Q Q R P P +S
Sbjct: 100 EGQPPQGGNQSQGPPPRPGKPEG--PPPQGG-----NQSQGPPPRPGKPEGPPPQGGNQS 152
Query: 129 APTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQP 164
RP +P PP Q Q PPP P P
Sbjct: 153 QGP-PPRPGKPEGPP-PQGGNQSQGPPPHPGKPEGP 186
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 48.1 bits (113), Expect = 6e-06
Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 34/201 (16%)
Query: 14 RPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGART-GHSPPARPGRHRGGC 72
+P+ ++P P+ KK + K RSR +S ++ +R+ H+ P R R R
Sbjct: 249 KPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSR- 307
Query: 73 AWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTL 132
+++P +RP R + R +R RHR + P R R SA
Sbjct: 308 SYSPRRRPSP-----------RRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLS 356
Query: 133 GAR---------------PRRPTWPPRAQLKRGDQQPPP----TPS-PASQPRGARRART 172
G+ P+R + PPR + PP PS PA+ P R + T
Sbjct: 357 GSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPT 416
Query: 173 RRRTNE-ESSRLQSQEGDGSG 192
+++N SR+ G SG
Sbjct: 417 PQQSNRTRKSRVSVSPGRTSG 437
Score = 47.4 bits (111), Expect = 9e-06
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 15/187 (8%)
Query: 7 RDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPAR-- 64
R R+ P+G+ R PP R++++ + RR R T P RT PP R
Sbjct: 534 RKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRT---PTPPPRRRTPSPPPRRRS 590
Query: 65 --PGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHP 122
P R+ + P R A + + P+R+ VS+ P
Sbjct: 591 PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRR---VSHSPPPKQRSSP 647
Query: 123 LRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART----RRRTNE 178
+ RRS P+L ++ R+ + P R+ + QP SP+ +PR + + + RR +
Sbjct: 648 VTKRRS-PSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS 706
Query: 179 ESSRLQS 185
R QS
Sbjct: 707 SPQRRQS 713
Score = 43.5 bits (101), Expect = 1e-04
Identities = 48/187 (25%), Positives = 73/187 (39%), Gaps = 11/187 (5%)
Query: 2 TVSERRD-RKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGES-TAKPGARTGH 59
+V +RR R+ + + R K++ VK+ R RR S +A P R
Sbjct: 478 SVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQ 537
Query: 60 SPPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLP 119
+ GR R +P+ P R A R +R P R+ R R+ P
Sbjct: 538 KETSPRGRRRR----SPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSP 593
Query: 120 PH--PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRAR--TRRR 175
P RR +P+ + RR PP +R PPP + P +R+ T+RR
Sbjct: 594 RRYSPPIQRRYSPSPPPK-RRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRR 652
Query: 176 TNEESSR 182
+ SS+
Sbjct: 653 SPSLSSK 659
Score = 42.7 bits (99), Expect = 2e-04
Identities = 56/237 (23%), Positives = 83/237 (35%), Gaps = 46/237 (19%)
Query: 1 MTVSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRV---------KSAAA------RRSRR 45
++VS R + +G + + P P + +K + K AAA R+ RR
Sbjct: 428 VSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRR 487
Query: 46 LGESTAKPGARTGHSPPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPER 105
+ ++ + S RP R +R + +R A + R R K R R
Sbjct: 488 QNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRR 547
Query: 106 QRQEVSYRHRATLP-PHPLRSRRSAPTLGARPRRPTWPPRAQL----------------- 147
+ R P P P RR PT R R P+ PPR +
Sbjct: 548 RSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPS 607
Query: 148 ---KRGDQQPPP------TPSPASQPRGARRARTRRR----TNEESSRLQSQEGDGS 191
KR PPP +PSP + R + ++R T S L S+ GS
Sbjct: 608 PPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGS 664
Score = 39.3 bits (90), Expect = 0.003
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 41/196 (20%)
Query: 6 RRDRKGTLRPQGKNR-----HQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
RR R+ + G + + PP+ K+T S+ R++RRL S + P R S
Sbjct: 346 RRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRT---SSPPRKTRRLSPSASPPRRRHRPS 402
Query: 61 PPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
PPA P P R ++ + R R R + P R +V+ +H+ T
Sbjct: 403 PPATP---------PPKTRHSPTPQQ---SNRTRKSRVSV-SPGRTSGKVT-KHKGT--- 445
Query: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
+R +P+ +PR + +L ++ + A ++ R RR N++S
Sbjct: 446 ----EKRESPSPAPKPR------KVELSESEEDKGGKMAAAD---SVQQRRQYRRQNQQS 492
Query: 181 SRLQSQEGDGSGGKDE 196
S S G S +DE
Sbjct: 493 S---SDSGSSSSSEDE 505
Score = 38.9 bits (89), Expect = 0.003
Identities = 40/162 (24%), Positives = 61/162 (37%), Gaps = 16/162 (9%)
Query: 9 RKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPARPGRH 68
R+ T P + R PPP+ R R S +R S + P R SPP P R
Sbjct: 569 RRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRY----SPSPPPKRRTASPPPPPKRR 624
Query: 69 RGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRS 128
+ + + R + + + L R+ S R P P +
Sbjct: 625 ASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSP 684
Query: 129 APTLGARPRRP---TWPPRAQLKRGDQQPPP---TPSPASQP 164
+P RPR P + PP ++RG P +PSP+++P
Sbjct: 685 SP----RPRAPQTSSSPP--PVRRGASSSPQRRQSPSPSTRP 720
Score = 32.0 bits (71), Expect = 0.41
Identities = 41/196 (20%), Positives = 67/196 (34%), Gaps = 15/196 (7%)
Query: 7 RDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPARPG 66
R R +R + K H + P + K+R S A + + E +P + P +
Sbjct: 183 RRRSSPVRRERKRSHSRSP--RHRTKSRSPSPAPEKKEKTPE-LPEPSVKV-KEPSVQEA 238
Query: 67 RHRGGCAWTPNQRPEAAAREARDA--GRLRAKRGGLREPERQRQEVSYRHRATLPPHPLR 124
P P +E + ++ R R R + R R+ P H
Sbjct: 239 TSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRP 298
Query: 125 SRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQ 184
RR R R ++ PR +R + P+P + PR RR+ R +
Sbjct: 299 RRRH------RSRSRSYSPR---RRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRR 349
Query: 185 SQEGDGSGGKDEASSA 200
SG +SS+
Sbjct: 350 RSSASLSGSSSSSSSS 365
Score = 27.7 bits (60), Expect = 7.8
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 101 REPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPP 156
+E R+++E S R P RRS+P R R + PR + K P P
Sbjct: 159 KESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAP 214
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 46.6 bits (109), Expect = 2e-05
Identities = 51/204 (25%), Positives = 80/204 (39%), Gaps = 12/204 (5%)
Query: 4 SERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPA 63
SERR R+ G+++ + + R + A+ RSR + S +
Sbjct: 194 SERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSS 253
Query: 64 RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEV--SYRHRATLPPH 121
GR + A + + +++R+ RD+ R++ +EP +E +YR T P
Sbjct: 254 SGGRRKSASATSSS----SSSRKDRDSKAHRSRTKSSKEPPSAYKEPPKAYREDKT-EPK 308
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART----RRRTN 177
R RRS LG R P +Q R + P P S P R R+ RR +
Sbjct: 309 AYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPA-GGGSSPYSRRLPRSPSPYSRRRS 367
Query: 178 EESSRLQSQEGDGSGGKDEASSAA 201
SR S E G SS++
Sbjct: 368 PSYSRHSSYERGGDVSPSPYSSSS 391
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 46.6 bits (109), Expect = 2e-05
Identities = 51/204 (25%), Positives = 80/204 (39%), Gaps = 12/204 (5%)
Query: 4 SERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPA 63
SERR R+ G+++ + + R + A+ RSR + S +
Sbjct: 194 SERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSS 253
Query: 64 RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEV--SYRHRATLPPH 121
GR + A + + +++R+ RD+ R++ +EP +E +YR T P
Sbjct: 254 SGGRRKSASATSSS----SSSRKDRDSKAHRSRTKSSKEPPSAYKEPPKAYREDKT-EPK 308
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART----RRRTN 177
R RRS LG R P +Q R + P P S P R R+ RR +
Sbjct: 309 AYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPA-GGGSSPYSRRLPRSPSPYSRRRS 367
Query: 178 EESSRLQSQEGDGSGGKDEASSAA 201
SR S E G SS++
Sbjct: 368 PSYSRHSSYERGGDVSPSPYSSSS 391
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 46.6 bits (109), Expect = 2e-05
Identities = 42/167 (25%), Positives = 63/167 (37%), Gaps = 21/167 (12%)
Query: 15 PQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKP------GARTGHSPPARPGRH 68
PQG N+ Q PPP + K R +S+ KP G H PP PG+
Sbjct: 83 PQGGNQSQGPPP-HPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKP 141
Query: 69 R------GGCAWTPNQRP-EAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPH 121
G + P P + ++ + R+ R +P+ Q+ + + PP
Sbjct: 142 ERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPG 201
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGAR 168
+ P G P++P PP + Q PPP P PR A+
Sbjct: 202 ---KPQGPPPAGGNPQQPQAPPAGK----PQGPPPPPQGGRPPRPAQ 241
Score = 42.7 bits (99), Expect = 2e-04
Identities = 45/188 (23%), Positives = 66/188 (35%), Gaps = 39/188 (20%)
Query: 14 RPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPARPGRHRGGCA 73
RPQG N+ Q+PPP + + G PP PG+
Sbjct: 40 RPQGGNQPQRPPPPPGKP----------------QGPPPQGGNQSQGPPPPPGK------ 77
Query: 74 WTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLG 133
P RP +++ K PER + + + T PP P + R P G
Sbjct: 78 --PEGRPPQGGNQSQGPPPHPGK------PERPPPQGGNQSQGT-PPPPGKPERPPPQGG 128
Query: 134 ARPRRPTWPP----RAQLKRGDQQPPPTPSPAS----QPRGARRARTRRRTNEESSRLQS 185
+ RP PP R + G+Q P P P P+ ++R+ R +
Sbjct: 129 NQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQ 188
Query: 186 QEGDGSGG 193
QEG+ G
Sbjct: 189 QEGNKPQG 196
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 46.2 bits (108), Expect = 2e-05
Identities = 49/186 (26%), Positives = 72/186 (38%), Gaps = 26/186 (13%)
Query: 16 QGKNRHQKPPPQNRQKKTRV-KSAAARRSRRLGESTAKPGARTGHSPPARPGRHRGGCAW 74
QG Q+PPPQ +Q + + A + +RL T+ P + P G+ R
Sbjct: 477 QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGR----- 531
Query: 75 TPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGA 134
RP A A A R A P QRQ P +R+++ + A
Sbjct: 532 --QSRPVAGGPGAPPAARPPAS------PSPQRQAGP----------PQATRQTSVSGPA 573
Query: 135 RPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSGGK 194
P+ PP Q ++G Q P P PA R A +A RT +++ G G G+
Sbjct: 574 PPKASGAPPGGQQRQGPPQKP--PGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGR 631
Query: 195 DEASSA 200
+ A
Sbjct: 632 PKPQLA 637
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 46.2 bits (108), Expect = 2e-05
Identities = 49/186 (26%), Positives = 72/186 (38%), Gaps = 26/186 (13%)
Query: 16 QGKNRHQKPPPQNRQKKTRV-KSAAARRSRRLGESTAKPGARTGHSPPARPGRHRGGCAW 74
QG Q+PPPQ +Q + + A + +RL T+ P + P G+ R
Sbjct: 477 QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGR----- 531
Query: 75 TPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGA 134
RP A A A R A P QRQ P +R+++ + A
Sbjct: 532 --QSRPVAGGPGAPPAARPPAS------PSPQRQAGP----------PQATRQTSVSGPA 573
Query: 135 RPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSGGK 194
P+ PP Q ++G Q P P PA R A +A RT +++ G G G+
Sbjct: 574 PPKASGAPPGGQQRQGPPQKP--PGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGR 631
Query: 195 DEASSA 200
+ A
Sbjct: 632 PKPQLA 637
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 46.2 bits (108), Expect = 2e-05
Identities = 52/209 (24%), Positives = 82/209 (39%), Gaps = 23/209 (11%)
Query: 7 RDRKGTLRPQGKNRHQKPP-----PQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSP 61
RD+ P R ++ P P ++ + R A RR RR + +R+ S
Sbjct: 346 RDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRR---RRRRRRSRSSASA 402
Query: 62 PARPGRHRGGCA-WTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
P R GR R A + R + AR + D+G R G EP +R + RA P
Sbjct: 403 PRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERP 462
Query: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTR------- 173
R ++P+ GA RR + K + P P P S R ++R+R
Sbjct: 463 PRARPASTSPSPGAHGRR----GGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPH 518
Query: 174 ---RRTNEESSRLQSQEGDGSGGKDEASS 199
R + + + ++G+G EA +
Sbjct: 519 SPSRSPSPKKPLSRDKDGEGRARHSEAEA 547
Score = 40.8 bits (94), Expect = 9e-04
Identities = 50/196 (25%), Positives = 73/196 (37%), Gaps = 27/196 (13%)
Query: 6 RRDRKGTLRPQGKNRHQ------KPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGH 59
RRDR + + K RH+ K +N++KK + RRS R ++ + + H
Sbjct: 210 RRDRSDS-GSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSH 268
Query: 60 -----SPPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQR---QEVS 111
SP +HR T +QR + + G G P+R Q
Sbjct: 269 YSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGG------SGWGSPQRNGGSGQRSG 322
Query: 112 YRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRA- 170
H + S+P+ R + P RG + P P +P+SQ RG R A
Sbjct: 323 AHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPA-RGKESPSPRSAPSSQGRGGRAAG 381
Query: 171 ----RTRRRTNEESSR 182
R RRR SR
Sbjct: 382 GAGRRRRRRRRRRRSR 397
Score = 33.5 bits (75), Expect = 0.14
Identities = 46/187 (24%), Positives = 68/187 (36%), Gaps = 16/187 (8%)
Query: 6 RRDRKGTLRPQ--GKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPA 63
RR R P+ G+ R + PP R S + R+R +S + GA G P
Sbjct: 394 RRSRSSASAPRRRGRRRPRPAPP-------RGSSRSLSRARSSSDSGSGRGA-PGPGPEP 445
Query: 64 RPGRHRGGCAWTPNQR-PEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHP 122
R GG +R P A + +RGG R + + P
Sbjct: 446 GSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSP 505
Query: 123 LRSR-RSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART----RRRTN 177
+SR RSA P R P + + D + S A R RR+R+ R+R
Sbjct: 506 SKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRR 565
Query: 178 EESSRLQ 184
+ S ++
Sbjct: 566 DSPSFME 572
Score = 31.6 bits (70), Expect = 0.54
Identities = 36/148 (24%), Positives = 55/148 (37%), Gaps = 9/148 (6%)
Query: 17 GKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAK-PGARTGHSPPAR-PGRHRGGCAW 74
GK ++PP + A RR G+S+++ PG +R P + R A
Sbjct: 455 GKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSA- 513
Query: 75 TPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGA 134
+RP + +R L + G E + R + P+R RR
Sbjct: 514 --EKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDSPSFM 571
Query: 135 RPRRPTWPPRAQLKRGDQQPPPTPSPAS 162
PRR T + KR P+PS +S
Sbjct: 572 EPRRIT----SARKRPIPYYRPSPSSSS 595
Score = 27.7 bits (60), Expect = 7.8
Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 11/152 (7%)
Query: 42 RSRRLGESTAKPGARTGHSPPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLR 101
R++ S+A P PP + + +GG + +R + + LR K+ ++
Sbjct: 155 RTKHWSSSSASP-------PPKKKKKKKGGHRRSRKKRRLESECSCGSSSPLRKKKKSVK 207
Query: 102 EPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKR--GDQQPPPTPS 159
+ R R + R + + +R + P R + G P S
Sbjct: 208 KHRRDRSDSGSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSS 267
Query: 160 PASQPRGARRARTRRRTNEESSRLQSQEGDGS 191
S R R + R +E + SQ GS
Sbjct: 268 HYSDSRSPSRLSPKHR--DEGRKTGSQRSSGS 297
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 45.8 bits (107), Expect = 3e-05
Identities = 51/211 (24%), Positives = 79/211 (37%), Gaps = 25/211 (11%)
Query: 4 SERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPA 63
S RD + T+R + + ++ ++ R +S RRS + S P+
Sbjct: 1909 SSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPS 1968
Query: 64 RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRH-----RATL 118
R R + TP++R +R +R R R R +R V R R
Sbjct: 1969 RRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRF 2028
Query: 119 PPHPLRSRRS-APTLGARPRRPTWPPRAQL-------------KRGDQQPP---PTPSPA 161
P+R +RS + G P+R T +AQL K G PP P P P
Sbjct: 2029 SRSPIRRKRSRSSERGRSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPT 2088
Query: 162 SQPRGARR---ARTRRRTNEESSRLQSQEGD 189
+ + A++ A T + QS+E D
Sbjct: 2089 IEEKVAKKSGGATIEELTEKCKQIAQSKEDD 2119
Score = 41.6 bits (96), Expect = 5e-04
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 24/183 (13%)
Query: 18 KNRHQKPPP-QNRQKKTRVK---SAAARRSRRLGESTAKPGARTGHSPPARPGRHRGGCA 73
K+ H+K +NR K + K S+ RS+R S K RT S R +
Sbjct: 1797 KDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKS 1856
Query: 74 WTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLR---SRRSAP 130
R + +R R + R R+K G R +++++ S +HR+ + SR +
Sbjct: 1857 HRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRK 1916
Query: 131 TLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART-------RRRTNEESSRL 183
T+ AR R P+ R+ TPS + R R R+ R RT SR
Sbjct: 1917 TVRARSRTPSRRSRSH----------TPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRT 1966
Query: 184 QSQ 186
S+
Sbjct: 1967 PSR 1969
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 45.8 bits (107), Expect = 3e-05
Identities = 51/211 (24%), Positives = 79/211 (37%), Gaps = 25/211 (11%)
Query: 4 SERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPA 63
S RD + T+R + + ++ ++ R +S RRS + S P+
Sbjct: 1909 SSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPS 1968
Query: 64 RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRH-----RATL 118
R R + TP++R +R +R R R R +R V R R
Sbjct: 1969 RRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRF 2028
Query: 119 PPHPLRSRRS-APTLGARPRRPTWPPRAQL-------------KRGDQQPP---PTPSPA 161
P+R +RS + G P+R T +AQL K G PP P P P
Sbjct: 2029 SRSPIRRKRSRSSERGRSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPT 2088
Query: 162 SQPRGARR---ARTRRRTNEESSRLQSQEGD 189
+ + A++ A T + QS+E D
Sbjct: 2089 IEEKVAKKSGGATIEELTEKCKQIAQSKEDD 2119
Score = 41.6 bits (96), Expect = 5e-04
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 24/183 (13%)
Query: 18 KNRHQKPPP-QNRQKKTRVK---SAAARRSRRLGESTAKPGARTGHSPPARPGRHRGGCA 73
K+ H+K +NR K + K S+ RS+R S K RT S R +
Sbjct: 1797 KDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKS 1856
Query: 74 WTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLR---SRRSAP 130
R + +R R + R R+K G R +++++ S +HR+ + SR +
Sbjct: 1857 HRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRK 1916
Query: 131 TLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART-------RRRTNEESSRL 183
T+ AR R P+ R+ TPS + R R R+ R RT SR
Sbjct: 1917 TVRARSRTPSRRSRSH----------TPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRT 1966
Query: 184 QSQ 186
S+
Sbjct: 1967 PSR 1969
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 45.4 bits (106), Expect = 4e-05
Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Query: 120 PHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEE 179
P P RS P L A P P PP PPP P PA +PR R +R R R
Sbjct: 108 PQPRARSRSQPGLSAPPPPPARPP--------PPPPPPPPPAPRPRAWRGSRRRSRPGSR 159
Query: 180 SSRLQSQEGDGSGGKD 195
+S GD G D
Sbjct: 160 PQTRRSCSGDLDGSGD 175
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 44.7 bits (104), Expect = 6e-05
Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 7/196 (3%)
Query: 14 RPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPARPGRHRGGCA 73
RPQ + K P + QK + + ++ R G+ A GA+ H P R G
Sbjct: 134 RPQNRGGGDKKPRRRGQKAAKSRGGGGKKPR--GQKAAGAGAKK-HRKPRRRGERAAAAG 190
Query: 74 WTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLG 133
Q+ AAA ++R G + G ++P R+R + + + R R + + +
Sbjct: 191 GKKLQK--AAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVK 248
Query: 134 AR-PRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSG 192
+R ++P + Q +RG Q +P+ A A + R +++ G G
Sbjct: 249 SRGDKKPLRGGKKQRERG-QNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQN 307
Query: 193 GKDEASSAAITEYLLC 208
++E L C
Sbjct: 308 RRNEVGGQHNLALLEC 323
Score = 31.2 bits (69), Expect = 0.70
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Query: 11 GTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKP-----GARTGHSPPARP 65
G +P+G+ ++R+ + R + AAA ++L ++ A G +T + +P
Sbjct: 159 GGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKP 218
Query: 66 GRHRG-------GCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATL 118
R RG G +R +AA + G + RGG ++ ER + S
Sbjct: 219 RRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEK 278
Query: 119 PPHPLRSRRSAPTLGARPR--RPTWPPRAQLKRGDQQ 153
P + A GA+ R R P +A+ +G +
Sbjct: 279 P-------QKAAAAGAKSRGGRGEKPQKAEAGQGQNR 308
Score = 27.7 bits (60), Expect = 7.8
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 76 PNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGAR 135
P QR A A+ R + G +EP +R+E R P+ SR + +R
Sbjct: 79 PAQRRSMQATVAKAGSPGRGRLG--KEP--RRRESWTRSAPRRCPYQDASRAGSRVCRSR 134
Query: 136 PRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSGGKD 195
P+ + +RG + +PRG + A + + + R + + +GGK
Sbjct: 135 PQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRR-RGERAAAAGGKK 193
Query: 196 EASSAA 201
+AA
Sbjct: 194 LQKAAA 199
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 43.1 bits (100), Expect = 2e-04
Identities = 41/127 (32%), Positives = 47/127 (37%), Gaps = 12/127 (9%)
Query: 52 KPGARTG--HSPPARPGRHRGGCAWTPNQRPEAAAREARDA-----GRLRAKRGGLR-EP 103
+PG G H PP H G C + P AA R GR RA G P
Sbjct: 47 RPGEEPGNRHPPPPAARTHPGSCR---ARCPSPAAGGLRGPWTAAPGRQRADEGAAAARP 103
Query: 104 ERQRQEVSYRHRATLPPHPLRSR-RSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPAS 162
ERQR + P P R R P P RP PP PP+P+PA
Sbjct: 104 ERQRVWARRLPGSAAAPAPGRDALRLPPPPPPPPERPRLPPAGLAGGPADSAPPSPAPAP 163
Query: 163 QPRGARR 169
+ R A R
Sbjct: 164 RSRPAPR 170
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 42.4 bits (98), Expect = 3e-04
Identities = 43/173 (24%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 15 PQGKNRHQKPPPQNRQKKTRVKSAAARRSRR-LGESTAKP--GARTGHSPPARPGRHRGG 71
PQG N+ Q PPP + + + +R R G+ P G PP PG+ +G
Sbjct: 62 PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 121
Query: 72 CAWTPNQRPEAAAREARDAG------RLRAKRGGLREPERQRQEVSYRHRATLPPHPLRS 125
N RP+ + G + R+ R +P+ + + + PP P +
Sbjct: 122 PPQGGN-RPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGP-PPPPGKP 179
Query: 126 RRSAPTLGARPRRPT-------WPPRAQLKRGDQQPP-----PTPSPASQPRG 166
+ P G +P+ P PP+ R Q PP P P +QP+G
Sbjct: 180 QGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQG 232
Score = 38.1 bits (87), Expect = 0.006
Identities = 43/183 (23%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 15 PQGKNRHQKPPPQNRQKKTRVKSAAARRSRR-LGESTAKP--GARTGHSPPARPGRHRGG 71
PQG NR Q PPP + + + +R R G+ P G PP PG+
Sbjct: 123 PQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGK---- 178
Query: 72 CAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPT 131
P P ++ + +G + ++ R S + PP ++ P
Sbjct: 179 ----PQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPP 234
Query: 132 LGARPRRPTWPPRAQLKRGDQQPPPTPSPASQP-RGARRARTRRRTNEESSRLQSQEGDG 190
P +P PP Q Q PPP P P +G ++++ R + QEG+
Sbjct: 235 --PPPGKPQGPP-PQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNN 291
Query: 191 SGG 193
G
Sbjct: 292 PQG 294
Score = 30.0 bits (66), Expect = 1.6
Identities = 40/163 (24%), Positives = 57/163 (34%), Gaps = 21/163 (12%)
Query: 15 PQGKNRHQKPPPQNRQKKTRVKSAAARRSRRL-GESTAKP--GARTGHSPPARPGRHRGG 71
PQG + Q PPP + + + +R S+ G+ P G PP PG+ +G
Sbjct: 184 PQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 243
Query: 72 CAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPT 131
N +P+ + G +GG + S R P P +
Sbjct: 244 PPQGGN-KPQGPPPPGKPQGP--PAQGGSKSQ-------SARSPPGKPQGPPQQE----- 288
Query: 132 LGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRR 174
G P+ P PP A Q PP P PR + R R
Sbjct: 289 -GNNPQGP--PPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSR 328
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 42.0 bits (97), Expect = 4e-04
Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 20/151 (13%)
Query: 56 RTGHSPPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHR 115
+ G G HR C P +P A+EA+ R P + + R+
Sbjct: 809 QVGRPEQGAVGPHRSHCCSQPGTQP---AQEAQ------------RGPSPEASWLCGRYC 853
Query: 116 ATLP---PHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART 172
T P P P R S + G+ + P + G +QP PTPSP +RR+
Sbjct: 854 PTPPRGRPCPQRRSSSCGSTGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSA 913
Query: 173 RRRTNEE--SSRLQSQEGDGSGGKDEASSAA 201
+ S + G G G++EAS +
Sbjct: 914 SQGAGSRGLSEEKTLRSGGGPQGQEEASGVS 944
>gi|40806209 WW domain containing E3 ubiquitin protein ligase 2
isoform 3 [Homo sapiens]
Length = 335
Score = 41.6 bits (96), Expect = 5e-04
Identities = 45/158 (28%), Positives = 60/158 (37%), Gaps = 24/158 (15%)
Query: 7 RDRKGT-LRPQGKNRHQKPPPQN----RQKKTRVKSAAARRSRRLGESTAKPGARTGHSP 61
RD GT + P+ NRHQ PP N R + R A+AR + GE + PGAR+ H
Sbjct: 166 RDSSGTAVAPE--NRHQ-PPSTNCFGGRSRTHRHSGASARTTPATGEQS--PGARSRHRQ 220
Query: 62 PARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPH 121
P + H G T N P A + G+ P V+ P+
Sbjct: 221 PVKNSGHSGLANGTVNDEPTTATDPEEPS------VVGVTSPPAAPLSVT--------PN 266
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPS 159
P + AP A P+ QL Q P P+
Sbjct: 267 PNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPA 304
>gi|40806207 WW domain containing E3 ubiquitin protein ligase 2
isoform 1 [Homo sapiens]
Length = 870
Score = 41.6 bits (96), Expect = 5e-04
Identities = 45/158 (28%), Positives = 60/158 (37%), Gaps = 24/158 (15%)
Query: 7 RDRKGT-LRPQGKNRHQKPPPQN----RQKKTRVKSAAARRSRRLGESTAKPGARTGHSP 61
RD GT + P+ NRHQ PP N R + R A+AR + GE + PGAR+ H
Sbjct: 166 RDSSGTAVAPE--NRHQ-PPSTNCFGGRSRTHRHSGASARTTPATGEQS--PGARSRHRQ 220
Query: 62 PARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPH 121
P + H G T N P A + G+ P V+ P+
Sbjct: 221 PVKNSGHSGLANGTVNDEPTTATDPEEPS------VVGVTSPPAAPLSVT--------PN 266
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPS 159
P + AP A P+ QL Q P P+
Sbjct: 267 PNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPA 304
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 41.2 bits (95), Expect = 7e-04
Identities = 51/220 (23%), Positives = 83/220 (37%), Gaps = 43/220 (19%)
Query: 9 RKGTLRPQGKNRH-QKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGAR-----TGHSPP 62
R G +PQ + R QK + + + + ++ RR G++ A GA+ T P
Sbjct: 239 RGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKP 298
Query: 63 ARPGRHRGGCAWTPNQ---------RPEAAAREARDAGRLRAKRGG------------LR 101
A GR G Q +P ++A A KRGG R
Sbjct: 299 AAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSR 358
Query: 102 EPERQRQEVSYRHRATLPPHPLRSR------RSAPTLGARPRRPTWP-PRAQLKRGDQQP 154
+ +R+R + R +A+ R R A G ++P W PR + ++
Sbjct: 359 KKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQK----- 413
Query: 155 PPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSGGK 194
+PA++PRG + RRR + + + G G K
Sbjct: 414 ----APAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKK 449
Score = 37.0 bits (84), Expect = 0.013
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 15/204 (7%)
Query: 8 DRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPARPGR 67
D+KG LR + + P+ + + R + A A + R G + KP R + +R G+
Sbjct: 385 DKKG-LREAKRRGDGRKKPRWQNPRRRAQKAPAAKPR--GGGSKKPRRRGPKAAKSRGGK 441
Query: 68 HRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHR-ATLPPHPLRS- 125
R G P +R + A ++A +AG RG ++ ++ + R L H ++
Sbjct: 442 SRSGGGKKPRRRGQKARQKAAEAG--AESRGDKKQGRQKASAAGTKSRGGGLKSHSGKNL 499
Query: 126 -RRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRR-------TN 177
RR A + +++ ++ ++ P + A G ++R R++ ++
Sbjct: 500 WRRGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSH 559
Query: 178 EESSRLQSQEGDGSGGKDEASSAA 201
QS+ G G+ + +AA
Sbjct: 560 GGGGNKQSRGGGGNKPRQWGQTAA 583
Score = 35.0 bits (79), Expect = 0.049
Identities = 39/180 (21%), Positives = 73/180 (40%), Gaps = 20/180 (11%)
Query: 36 KSAAARRSRRLGESTAKPGARTGHSPPARP--GRHRGGCAWTPNQRPEAAAREARDAGRL 93
KS + ++ RR G + + G A+ G+ RGG ++RP+ AA G
Sbjct: 183 KSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRR-KKHRRPKPAA------GGA 235
Query: 94 RAKRGGLREPERQRQEVSY----------RHRATLPPHPLRSRRSAPTLGARPRRPTWPP 143
+++RGG ++P++QR+ + R R ++A GA+ R
Sbjct: 236 KSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAG 295
Query: 144 RAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQ-EGDGSGGKDEASSAAI 202
+G P PR R + RR +++++ + G GG+ +A+ +
Sbjct: 296 EKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGV 355
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 41.2 bits (95), Expect = 7e-04
Identities = 59/238 (24%), Positives = 76/238 (31%), Gaps = 58/238 (24%)
Query: 12 TLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRR-LGESTAKPGART--GHSPPARPGRH 68
T RP G R PPP RV AA R+ L E G T +P A P R
Sbjct: 26 TPRPPGSPR---PPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRS 82
Query: 69 RGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPER-----------------QRQEVS 111
G + P RP A+ R R G + P R +E
Sbjct: 83 AGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETV 142
Query: 112 YRHRATLPPH---------------------PLRSRRSA----------PTLGARPRRPT 140
R +AT P P +RRS P ARPR PT
Sbjct: 143 ARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPT 202
Query: 141 WPPRAQLKRGDQQPPPTPSPASQPR----GARRARTRRRTNEESSRLQSQEGDGSGGK 194
PR + + PSPA++ R G + R + ++ L S G +
Sbjct: 203 EGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR 260
Score = 37.4 bits (85), Expect = 0.010
Identities = 43/149 (28%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 38 AAARRSRRLGESTAKPGARTGHSPPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKR 97
A ARRSR G P +P ARP G + + E + E A R R
Sbjct: 175 AMARRSRAAGTEVGLPRP----APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSA 230
Query: 98 GGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPT 157
GG + R S + P S R P A P +P P Q R Q PP
Sbjct: 231 GGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK-PKGLQALRPPQVTPPR 289
Query: 158 PSPASQPRGARRARTRRRTNEESSRLQSQ 186
A P + + T S+ LQSQ
Sbjct: 290 KDAA--PALGPLSSSPLATPSPSAALQSQ 316
Score = 27.7 bits (60), Expect = 7.8
Identities = 31/103 (30%), Positives = 36/103 (34%), Gaps = 14/103 (13%)
Query: 100 LREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWP--------PRAQLKRGD 151
L P Q V +PP P S PTL A PRRP P PR L
Sbjct: 555 LATPPPQAPPVLAAPLLQVPPSPPAS----PTLQA-PRRPPTPGPDTSVSGPRLTLALAP 609
Query: 152 -QQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSGG 193
PPP+ SP+S G A L+ + GG
Sbjct: 610 GPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGG 652
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 41.2 bits (95), Expect = 7e-04
Identities = 59/238 (24%), Positives = 76/238 (31%), Gaps = 58/238 (24%)
Query: 12 TLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRR-LGESTAKPGART--GHSPPARPGRH 68
T RP G R PPP RV AA R+ L E G T +P A P R
Sbjct: 26 TPRPPGSPR---PPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRS 82
Query: 69 RGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPER-----------------QRQEVS 111
G + P RP A+ R R G + P R +E
Sbjct: 83 AGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETV 142
Query: 112 YRHRATLPPH---------------------PLRSRRSA----------PTLGARPRRPT 140
R +AT P P +RRS P ARPR PT
Sbjct: 143 ARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPT 202
Query: 141 WPPRAQLKRGDQQPPPTPSPASQPR----GARRARTRRRTNEESSRLQSQEGDGSGGK 194
PR + + PSPA++ R G + R + ++ L S G +
Sbjct: 203 EGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR 260
Score = 35.4 bits (80), Expect = 0.037
Identities = 36/124 (29%), Positives = 43/124 (34%), Gaps = 5/124 (4%)
Query: 38 AAARRSRRLGESTAKPGARTGHSPPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKR 97
A ARRSR G P +P ARP G + + E + E A R R
Sbjct: 175 AMARRSRAAGTEVGLPRP----APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSA 230
Query: 98 GGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPT 157
GG + R S + P S R P A P +P P Q R Q PP
Sbjct: 231 GGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK-PKGLQALRPPQVTPPR 289
Query: 158 PSPA 161
A
Sbjct: 290 KDAA 293
Score = 27.7 bits (60), Expect = 7.8
Identities = 31/103 (30%), Positives = 36/103 (34%), Gaps = 14/103 (13%)
Query: 100 LREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWP--------PRAQLKRGD 151
L P Q V +PP P S PTL A PRRP P PR L
Sbjct: 824 LATPPPQAPPVLAAPLLQVPPSPPAS----PTLQA-PRRPPTPGPDTSVSGPRLTLALAP 878
Query: 152 -QQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSGG 193
PPP+ SP+S G A L+ + GG
Sbjct: 879 GPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGG 921
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 41.2 bits (95), Expect = 7e-04
Identities = 43/147 (29%), Positives = 52/147 (35%), Gaps = 28/147 (19%)
Query: 24 PPPQNRQKKTRVKSAAARRSRRLGESTA-KPGARTGHSPPARPGRHRGGCAWTPNQRPEA 82
P P R R + A G + A +PG G S P PG RGG P R A
Sbjct: 116 PQPAPRPAPGRSSALALAGGAAPGVARAQRPGGSGGRSHPGGPGSPRGGGTVGPGDRGPA 175
Query: 83 AAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP----HPLRSRRSAPTLGARPRR 138
AA D GR P+R + R A PP P++S P L P+
Sbjct: 176 AA----DGGR----------PQRTVRAAETRGAAAAPPLTLEGPVQSHHGTPALTQGPQS 221
Query: 139 P---------TWPPRAQLKRGDQQPPP 156
P T P + G PPP
Sbjct: 222 PRDGAQLGACTRPVDVRDSGGRPLPPP 248
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 40.8 bits (94), Expect = 9e-04
Identities = 43/183 (23%), Positives = 67/183 (36%), Gaps = 13/183 (7%)
Query: 15 PQGKNRHQKPPPQNRQK----KTRVKSAAARRSRRLGESTAKPGARTGHSPPARPGRHRG 70
PQG N+ Q PPP + + + KS +AR + G PP PG+ +G
Sbjct: 206 PQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 265
Query: 71 GCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAP 130
N +P+ + G +GG + R S + PP ++ P
Sbjct: 266 PPPQGGN-KPQGPPPPGKPQGP--PPQGG----SKSRSSRSPPGKPQGPPPQGGNQPQGP 318
Query: 131 TLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDG 190
P +P PP + PPP P+G ++R+ R + QEG+
Sbjct: 319 P--PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNN 376
Query: 191 SGG 193
G
Sbjct: 377 PQG 379
Score = 39.7 bits (91), Expect = 0.002
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 14/164 (8%)
Query: 15 PQGKNRHQKPPPQNRQKKTRVKSAAARRSRR-LGESTAKP--GARTGHSPPARPGRHRGG 71
PQG N+ Q PPP + + + +R R G+ P G PP PG+ +G
Sbjct: 83 PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 142
Query: 72 CAWTPNQRPEAAAREARDAG-------RLRAKRGGLREPERQRQEVSYRHRATLPPHPLR 124
N +P+ + G + R+ R +P+ + + + PP P +
Sbjct: 143 PPQGGN-KPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGP-PPPPGK 200
Query: 125 SRRSAPTLGARPRRPTWP--PRAQLKRGDQQPPPTPSPASQPRG 166
+ P G +P+ P P P+ +GD + SP +P+G
Sbjct: 201 PQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQG 244
Score = 35.4 bits (80), Expect = 0.037
Identities = 41/164 (25%), Positives = 57/164 (34%), Gaps = 22/164 (13%)
Query: 15 PQGKNRHQKPPPQNRQKKTRVKSAAARRSRRL--GESTAKP--GARTGHSPPARPGRHRG 70
PQG N+ Q PPP + + + + RS R G+ P G PP PG+ +G
Sbjct: 268 PQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 327
Query: 71 GCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAP 130
N +P+ + G P+ + S R P P +
Sbjct: 328 PPPQGGN-KPQGPPPPGKPQGP---------PPQGGSKSRSARSPPGKPQGPPQQE---- 373
Query: 131 TLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRR 174
G P+ P PP A Q PP P PR + R R
Sbjct: 374 --GNNPQGP--PPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSR 413
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 40.4 bits (93), Expect = 0.001
Identities = 52/178 (29%), Positives = 67/178 (37%), Gaps = 51/178 (28%)
Query: 11 GTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRR---------------LGESTAKPGA 55
G RP Q P + R ++TR+ +A R + R + S+ GA
Sbjct: 210 GGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGA 269
Query: 56 RTGHSPPARP------------GRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREP 103
T S ARP GR RGGCA P A G L+ RG
Sbjct: 270 ATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSA-------PGGLQDCRG----- 317
Query: 104 ERQRQEVSYRHRATLP--PHPLRSRRS-APTLGARPRRPTWPPRAQLKRGDQQPPPTP 158
RQ +E ++ R+ P PHP SR + A L P+ P P A PPP P
Sbjct: 318 -RQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKLA--------PPPLP 366
Score = 27.7 bits (60), Expect = 7.8
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 18/105 (17%)
Query: 80 PEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRP 139
P A R + RL ++G VS+ + + +PLR++ S G+ PRRP
Sbjct: 38 PHTPATGTRSSYRLLPQKGRGNLRGAPTAPVSF---SRIRRNPLRTQLS----GSPPRRP 90
Query: 140 T-----------WPPRAQLKRGDQQPPPTPSPASQPRGARRARTR 173
T P R + + G + P P+ + RG R+ R R
Sbjct: 91 TSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLR 135
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 40.4 bits (93), Expect = 0.001
Identities = 52/178 (29%), Positives = 67/178 (37%), Gaps = 51/178 (28%)
Query: 11 GTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRR---------------LGESTAKPGA 55
G RP Q P + R ++TR+ +A R + R + S+ GA
Sbjct: 210 GGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGA 269
Query: 56 RTGHSPPARP------------GRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREP 103
T S ARP GR RGGCA P A G L+ RG
Sbjct: 270 ATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSA-------PGGLQDCRG----- 317
Query: 104 ERQRQEVSYRHRATLP--PHPLRSRRS-APTLGARPRRPTWPPRAQLKRGDQQPPPTP 158
RQ +E ++ R+ P PHP SR + A L P+ P P A PPP P
Sbjct: 318 -RQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKLA--------PPPLP 366
Score = 27.7 bits (60), Expect = 7.8
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 18/105 (17%)
Query: 80 PEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRP 139
P A R + RL ++G VS+ + + +PLR++ S G+ PRRP
Sbjct: 38 PHTPATGTRSSYRLLPQKGRGNLRGAPTAPVSF---SRIRRNPLRTQLS----GSPPRRP 90
Query: 140 T-----------WPPRAQLKRGDQQPPPTPSPASQPRGARRARTR 173
T P R + + G + P P+ + RG R+ R R
Sbjct: 91 TSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLR 135
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 40.4 bits (93), Expect = 0.001
Identities = 53/203 (26%), Positives = 71/203 (34%), Gaps = 30/203 (14%)
Query: 2 TVSERRDRKG---TLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTG 58
T+ E R G T RP R ++ PP V S R G + P + G
Sbjct: 69 TIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPG----RASGTTRPGPLGQKG 124
Query: 59 HSPPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRG---GLREPERQRQEVSYRHR 115
A RG + EA R A AG R G G P R+ +
Sbjct: 125 LRISAEETVARG-------KATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 177
Query: 116 ATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPR----GARRAR 171
LP R AP+ ARPR PT PR + + PSPA++ R G +
Sbjct: 178 VGLP-------RPAPS--ARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRP 228
Query: 172 TRRRTNEESSRLQSQEGDGSGGK 194
R + ++ L S G +
Sbjct: 229 ASRSLSSSATPLSSPARSGPSAR 251
Score = 36.2 bits (82), Expect = 0.022
Identities = 40/144 (27%), Positives = 49/144 (34%), Gaps = 22/144 (15%)
Query: 38 AAARRSRRLGESTAKPGARTGHSPPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKR 97
A ARRSR G P +P ARP G + + E + E A R R
Sbjct: 166 AMARRSRAAGTEVGLPRP----APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSA 221
Query: 98 GGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPP- 156
GG + R S + P S R P A P +P P Q R Q PP
Sbjct: 222 GGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK-PKGLQALRPPQVTPPR 280
Query: 157 ----------------TPSPASQP 164
TPSP++ P
Sbjct: 281 KDAAPALGPLSSSPLATPSPSAPP 304
Score = 28.1 bits (61), Expect = 5.9
Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 15/133 (11%)
Query: 45 RLGESTAKPGARTGHSPPARPGRHRGGCAWTPNQRP--EAAAREARDAGRLRAKRGGLRE 102
R S+A + T SP AR GG P R +A + A + RG R
Sbjct: 197 RKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRA 256
Query: 103 PERQRQEVSYRHRATLPPHPLRSRR-SAPTLG------------ARPRRPTWPPRAQLKR 149
P Q +A PP R+ +AP LG + P P+ PP Q
Sbjct: 257 PAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLP 316
Query: 150 GDQQPPPTPSPAS 162
PP+ + S
Sbjct: 317 SPPATPPSQATTS 329
Score = 27.7 bits (60), Expect = 7.8
Identities = 31/103 (30%), Positives = 36/103 (34%), Gaps = 14/103 (13%)
Query: 100 LREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWP--------PRAQLKRGD 151
L P Q V +PP P S PTL A PRRP P PR L
Sbjct: 516 LATPPPQAPPVLAAPLLQVPPSPPAS----PTLQA-PRRPPTPGPDTSVSGPRLTLALAP 570
Query: 152 -QQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSGG 193
PPP+ SP+S G A L+ + GG
Sbjct: 571 GPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGG 613
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,138,986
Number of Sequences: 37866
Number of extensions: 665402
Number of successful extensions: 7521
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 900
Number of HSP's that attempted gapping in prelim test: 5648
Number of HSP's gapped (non-prelim): 2411
length of query: 216
length of database: 18,247,518
effective HSP length: 98
effective length of query: 118
effective length of database: 14,536,650
effective search space: 1715324700
effective search space used: 1715324700
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.