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Search of human proteins with 169164409
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169164409 PREDICTED: hypothetical protein [Homo sapiens]
(120 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169164409 PREDICTED: hypothetical protein [Homo sapiens] 246 4e-66
gi|113414195 PREDICTED: hypothetical protein [Homo sapiens] 246 4e-66
gi|113413381 PREDICTED: hypothetical protein [Homo sapiens] 246 4e-66
gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens] 31 0.19
gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo ... 31 0.19
gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo ... 31 0.19
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens] 31 0.25
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens] 31 0.25
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens] 31 0.25
gi|118498337 HECT domain containing 1 [Homo sapiens] 31 0.25
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 30 0.32
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens] 30 0.42
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 30 0.55
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 29 0.72
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 29 0.72
gi|153792536 ATPase family, AAA domain containing 2B [Homo sapiens] 29 0.72
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens] 29 0.94
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 29 0.94
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 29 0.94
gi|7662010 zinc finger protein 516 [Homo sapiens] 29 0.94
gi|169214821 PREDICTED: hypothetical protein [Homo sapiens] 28 1.2
gi|169215021 PREDICTED: hypothetical protein [Homo sapiens] 28 1.2
gi|169214546 PREDICTED: hypothetical protein [Homo sapiens] 28 1.2
gi|18254464 relaxin 3 preproprotein [Homo sapiens] 28 1.2
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 28 1.2
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 28 1.6
gi|193211603 pleckstrin homology domain containing, family G (wi... 28 1.6
gi|193211598 pleckstrin homology domain containing, family G (wi... 28 1.6
gi|193211596 pleckstrin homology domain containing, family G (wi... 28 1.6
gi|193211594 pleckstrin homology domain containing, family G (wi... 28 1.6
>gi|169164409 PREDICTED: hypothetical protein [Homo sapiens]
Length = 120
Score = 246 bits (627), Expect = 4e-66
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MPRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAA 60
MPRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAA
Sbjct: 1 MPRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAA 60
Query: 61 AGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGRPRTSAC 120
AGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGRPRTSAC
Sbjct: 61 AGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGRPRTSAC 120
>gi|113414195 PREDICTED: hypothetical protein [Homo sapiens]
Length = 120
Score = 246 bits (627), Expect = 4e-66
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MPRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAA 60
MPRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAA
Sbjct: 1 MPRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAA 60
Query: 61 AGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGRPRTSAC 120
AGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGRPRTSAC
Sbjct: 61 AGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGRPRTSAC 120
>gi|113413381 PREDICTED: hypothetical protein [Homo sapiens]
Length = 120
Score = 246 bits (627), Expect = 4e-66
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MPRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAA 60
MPRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAA
Sbjct: 1 MPRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAA 60
Query: 61 AGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGRPRTSAC 120
AGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGRPRTSAC
Sbjct: 61 AGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGRPRTSAC 120
>gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens]
Length = 1950
Score = 31.2 bits (69), Expect = 0.19
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 13 GDLGPKARTQSFSASIGGQCPDVPGA---------QGDTSPGAGIGQDSRSTHARAAAGS 63
G+ GP A + G PGA G T P G + S+ A ++ G
Sbjct: 1630 GEAGPGATVSGSTGVSAGSITASPGASATSSESSKSGTTGPSVGGKTGATSSEATSSEGM 1689
Query: 64 SHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGG 113
S ++ + + S++ + + G++P G R S S G F+GG
Sbjct: 1690 S-GVTGQSLGSTAGSDSEITAKTSFTGSSPPG--KLTRPSPGSPGHFSGG 1736
>gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo
sapiens]
Length = 2134
Score = 31.2 bits (69), Expect = 0.19
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 13 GDLGPKARTQSFSASIGGQCPDVPGA---------QGDTSPGAGIGQDSRSTHARAAAGS 63
G+ GP A + G PGA G T P G + S+ A ++ G
Sbjct: 1814 GEAGPGATVSGSTGVSAGSITASPGASATSSESSKSGTTGPSVGGKTGATSSEATSSEGM 1873
Query: 64 SHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGG 113
S ++ + + S++ + + G++P G R S S G F+GG
Sbjct: 1874 S-GVTGQSLGSTAGSDSEITAKTSFTGSSPPG--KLTRPSPGSPGHFSGG 1920
>gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo
sapiens]
Length = 2134
Score = 31.2 bits (69), Expect = 0.19
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 13 GDLGPKARTQSFSASIGGQCPDVPGA---------QGDTSPGAGIGQDSRSTHARAAAGS 63
G+ GP A + G PGA G T P G + S+ A ++ G
Sbjct: 1814 GEAGPGATVSGSTGVSAGSITASPGASATSSESSKSGTTGPSVGGKTGATSSEATSSEGM 1873
Query: 64 SHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGG 113
S ++ + + S++ + + G++P G R S S G F+GG
Sbjct: 1874 S-GVTGQSLGSTAGSDSEITAKTSFTGSSPPG--KLTRPSPGSPGHFSGG 1920
>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 30.8 bits (68), Expect = 0.25
Identities = 28/103 (27%), Positives = 34/103 (33%), Gaps = 19/103 (18%)
Query: 17 PKARTQSFSASIGGQCPDVPGAQGDTSP-----GAGIGQDSRSTHARAAAGSSHWISAGT 71
P R Q +S G + PG G G G+G RS RA AG+ I A
Sbjct: 7 PARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAP 66
Query: 72 NSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGR 114
+ P G G K G+AGGR
Sbjct: 67 SVGP--------------GGELQGWGRKSGCRPPGPEGWAGGR 95
>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 30.8 bits (68), Expect = 0.25
Identities = 28/103 (27%), Positives = 34/103 (33%), Gaps = 19/103 (18%)
Query: 17 PKARTQSFSASIGGQCPDVPGAQGDTSP-----GAGIGQDSRSTHARAAAGSSHWISAGT 71
P R Q +S G + PG G G G+G RS RA AG+ I A
Sbjct: 7 PARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAP 66
Query: 72 NSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGR 114
+ P G G K G+AGGR
Sbjct: 67 SVGP--------------GGELQGWGRKSGCRPPGPEGWAGGR 95
>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 30.8 bits (68), Expect = 0.25
Identities = 28/103 (27%), Positives = 34/103 (33%), Gaps = 19/103 (18%)
Query: 17 PKARTQSFSASIGGQCPDVPGAQGDTSP-----GAGIGQDSRSTHARAAAGSSHWISAGT 71
P R Q +S G + PG G G G+G RS RA AG+ I A
Sbjct: 7 PARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAP 66
Query: 72 NSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGR 114
+ P G G K G+AGGR
Sbjct: 67 SVGP--------------GGELQGWGRKSGCRPPGPEGWAGGR 95
>gi|118498337 HECT domain containing 1 [Homo sapiens]
Length = 2610
Score = 30.8 bits (68), Expect = 0.25
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 2 PRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAAA 61
P +V SP + TQS+S+ + CPD TS AG S+ + +
Sbjct: 1340 PDTVASPKPVSSTVS--GTTQSWSSLVKNNCPD------KTSAAAGSSSRKGSSSSVCSV 1391
Query: 62 GSSHWISAGTNSHPRRTSSDLLLRKTRIGNA 92
SS IS G+ RR S++++ + + A
Sbjct: 1392 ASSSDISLGSTKTERR--SEIVMEHSIVSGA 1420
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 30.4 bits (67), Expect = 0.32
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 12 QGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIG 49
+G GPK + IGG+ P +PG +GD P G
Sbjct: 1340 RGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPG 1377
>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
Length = 1909
Score = 30.0 bits (66), Expect = 0.42
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 6/101 (5%)
Query: 11 AQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAAAGSSHWISAG 70
A G G KAR+ SFS G + P P +G +G + T+ S ++
Sbjct: 1265 ALGMNGAKARSHSFSTHSGDK-PSTPPIEG-----SGKVRTQIITNTAERGNSLTRQNSS 1318
Query: 71 TNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFA 111
T S P + S +L P G + + S S+G F+
Sbjct: 1319 TESSPNKAPSAPMLESLPSVGRPSGHPSSGKGSLGSSGSFS 1359
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 29.6 bits (65), Expect = 0.55
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 2 PRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAAA 61
PR+ P EA + GP+ R +S +S G P PGA T+ G+ G+ R + A
Sbjct: 56 PRAEALPPEAADEGGPRGRLRSRDSSCGR--PGTPGA-ASTAKGSPNGECGRGEPQCSPA 112
Query: 62 G 62
G
Sbjct: 113 G 113
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 29.3 bits (64), Expect = 0.72
Identities = 26/83 (31%), Positives = 31/83 (37%)
Query: 17 PKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAAAGSSHWISAGTNSHPR 76
P R AS G P V G G SP A G + + AR AAG SA
Sbjct: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
Query: 77 RTSSDLLLRKTRIGNAPDGTRNK 99
+ L R+ R A G R +
Sbjct: 202 ALACAQLPRRPRGAGARRGMRRR 224
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 29.3 bits (64), Expect = 0.72
Identities = 26/83 (31%), Positives = 31/83 (37%)
Query: 17 PKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAAAGSSHWISAGTNSHPR 76
P R AS G P V G G SP A G + + AR AAG SA
Sbjct: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
Query: 77 RTSSDLLLRKTRIGNAPDGTRNK 99
+ L R+ R A G R +
Sbjct: 202 ALACAQLPRRPRGAGARRGMRRR 224
>gi|153792536 ATPase family, AAA domain containing 2B [Homo
sapiens]
Length = 1458
Score = 29.3 bits (64), Expect = 0.72
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 40 GDTSPGAGIGQDSRSTHARAAAGSSHWISAGTNSHPRRTSS 80
G SPG G G + A GSSH+IS+ T S R +S
Sbjct: 13 GSKSPGPGPGPGA-GAEPGATGGSSHFISSRTRSSKTRAAS 52
>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
Length = 474
Score = 28.9 bits (63), Expect = 0.94
Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 7/105 (6%)
Query: 18 KARTQSFSASIGGQCPDVPGAQGDT---SPGAGIGQDSRSTHARAAAGSSHWISAGTNSH 74
K ++ + ++S PG +GD S G G G + A G G NS
Sbjct: 133 KVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGGGGGASGGGANSK 192
Query: 75 PRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGGRPRTSA 119
P + S +++ G +K GG GG+ +A
Sbjct: 193 PAQKKS----CGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAA 233
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 28.9 bits (63), Expect = 0.94
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 52 SRSTHARAAAGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFA 111
SRS+H+R+++ SS S+ + S R SS ++R ++ + +R++ KS++S+
Sbjct: 206 SRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSR-SSSRERSRSRGSKSRSSSRSHR 264
Query: 112 G 112
G
Sbjct: 265 G 265
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 28.9 bits (63), Expect = 0.94
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 52 SRSTHARAAAGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFA 111
SRS+H+R+++ SS S+ + S R SS ++R ++ + +R++ KS++S+
Sbjct: 206 SRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSR-SSSRERSRSRGSKSRSSSRSHR 264
Query: 112 G 112
G
Sbjct: 265 G 265
>gi|7662010 zinc finger protein 516 [Homo sapiens]
Length = 1163
Score = 28.9 bits (63), Expect = 0.94
Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 7/106 (6%)
Query: 10 EAQGDLGPKARTQSFSASIGGQCPDVPGA--QGDTSPGAGIGQDSRSTHARAAAGSSHWI 67
++ GD +AR S S P PG+ SPG+G+ + A +G
Sbjct: 545 DSDGDRAARARCGSLSEGDSASQPSSPGSACAAADSPGSGLADE-----AAEDSGEEGAP 599
Query: 68 SAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAGG 113
PRR + T + + + D S+ TG G
Sbjct: 600 EPAPGGQPRRCCFSEEVTSTELSSGDQSHKMGDNASERDTGESKAG 645
>gi|169214821 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 53 RSTHARAAAGSSHWIS------AGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKAS 106
R+ A GS+H + +GT H R T + LL++T G GTR + + +
Sbjct: 22 RTLDALRLLGSAHATTTHPNPASGTLGHTRHTYTRALLQRTHDGKERVGTRRRGQGTDPV 81
Query: 107 TGGFAGGRPR 116
AG R R
Sbjct: 82 PPSRAGARRR 91
>gi|169215021 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 53 RSTHARAAAGSSHWIS------AGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKAS 106
R+ A GS+H + +GT H R T + LL++T G GTR + + +
Sbjct: 22 RTLDALRLLGSAHATTTHPNPASGTLGHTRHTYTRALLQRTHDGKERVGTRRRGQGTDPV 81
Query: 107 TGGFAGGRPR 116
AG R R
Sbjct: 82 PPSRAGARRR 91
>gi|169214546 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 53 RSTHARAAAGSSHWIS------AGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKAS 106
R+ A GS+H + +GT H R T + LL++T G GTR + + +
Sbjct: 22 RTLDALRLLGSAHATTTHPNPASGTLGHTRHTYTRALLQRTHDGKERVGTRRRGQGTDPV 81
Query: 107 TGGFAGGRPR 116
AG R R
Sbjct: 82 PPSRAGARRR 91
>gi|18254464 relaxin 3 preproprotein [Homo sapiens]
Length = 142
Score = 28.5 bits (62), Expect = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 38 AQGDTSPGAGIGQDSRSTHARAAAGSSHWIS 68
A GDT P A +DS + A GSS W++
Sbjct: 62 AMGDTFPDADADEDSLAGELDEAMGSSEWLA 92
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 28.5 bits (62), Expect = 1.2
Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 10/118 (8%)
Query: 2 PRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAAA 61
P S SP + P+ R ++ +A+ P A+G SP S+ RAA
Sbjct: 328 PGSAHSPPDKPSSPSPRVRDKAAAAA------PTPPARGKESPSPRSAPSSQGRGGRAAG 381
Query: 62 GSSHWISAGTNSHPRRTSSDLLLRKTRIGNAP----DGTRNKDRKSKASTGGFAGGRP 115
G+ R+S+ R+ R P +R+ R +S G G P
Sbjct: 382 GAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAP 439
Score = 26.2 bits (56), Expect = 6.1
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 53 RSTHARAAAGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGGFAG 112
R +H R ++GSSH S ++ R+ S L + G R+ +S + +GG
Sbjct: 250 RRSH-RHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGW 308
Query: 113 GRPR 116
G P+
Sbjct: 309 GSPQ 312
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 28.1 bits (61), Expect = 1.6
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 7/87 (8%)
Query: 34 DVPGAQGDTSPGAGIGQDSRSTHARAAAGSSHWISAGTNSHPRRTSSDLLLRKTRIGNA- 92
+ PG QG P AG AAA ++ AG PR + L R+ G A
Sbjct: 1330 EAPGGQG--RPEAGRPASEARAPGLAAADAADAARAGGKEAPRAAAGSELCRREGPGAAP 1387
Query: 93 ----PDGTRNKDRKSKASTGGFAGGRP 115
P G + +++ G AG RP
Sbjct: 1388 AFAGPGGGGSGALEAEGRAGARAGPRP 1414
>gi|193211603 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 2 [Homo sapiens]
Length = 1110
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 9 LEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTS 43
LEA+ +LG + + + I QCP G+ G S
Sbjct: 1058 LEAEAELGGQPSLTAEDSEISSQCPSASGSSGSDS 1092
>gi|193211598 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 1 [Homo sapiens]
Length = 1191
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 9 LEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTS 43
LEA+ +LG + + + I QCP G+ G S
Sbjct: 1139 LEAEAELGGQPSLTAEDSEISSQCPSASGSSGSDS 1173
>gi|193211596 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 1 [Homo sapiens]
Length = 1191
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 9 LEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTS 43
LEA+ +LG + + + I QCP G+ G S
Sbjct: 1139 LEAEAELGGQPSLTAEDSEISSQCPSASGSSGSDS 1173
>gi|193211594 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 1 [Homo sapiens]
Length = 1191
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 9 LEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTS 43
LEA+ +LG + + + I QCP G+ G S
Sbjct: 1139 LEAEAELGGQPSLTAEDSEISSQCPSASGSSGSDS 1173
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,288,586
Number of Sequences: 37866
Number of extensions: 241386
Number of successful extensions: 881
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 829
Number of HSP's gapped (non-prelim): 111
length of query: 120
length of database: 18,247,518
effective HSP length: 89
effective length of query: 31
effective length of database: 14,877,444
effective search space: 461200764
effective search space used: 461200764
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.